| 1 | # $Id: Portfile 20457 2006-11-03 15:12:00Z blair@macports.org $ |
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| 2 | PortSystem 1.0 |
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| 3 | name ncbi_tools |
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| 4 | version 20061015 |
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| 5 | description blast is a set of tools for doing nucleotide and protein searches |
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| 6 | maintainers michael.thon@yahoo.com |
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| 7 | categories science |
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| 8 | platforms darwin |
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| 9 | homepage http://www.ncbi.nlm.nih.gov/blast/ |
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| 10 | fetch.use_epsv no |
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| 11 | master_sites ftp://ftp.ncbi.nlm.nih.gov/toolbox/ncbi_tools/ |
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| 12 | distfiles ncbi.tar.gz |
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| 13 | checksums md5 8eca84753fd7a1d39bab256a4944f65e |
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| 14 | worksrcdir |
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| 15 | configure {} |
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| 16 | build.cmd './ncbi/make/makedis.csh' |
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| 17 | build.target |
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| 18 | set binaries "Psequin asn2ff asn2gb asn2idx asn2xml asndhuff asntool bl2bag.cgi bl2seq blast blast.REAL blast_cs.REAL blastall blastcl3 blastclust blastpgp cdscan checksub copymat ddv debruijn demo_regexp demo_regexp_grep dosimple entrcmd entrez2 errhdr fa2htgs fastacmd findspl formatdb formatrpsdb getfeat getmesh getpub getseq gil2bin idfetch impala indexpub makemat makeset megablast ncbisort nph-viewgif.cgi psiblast.REAL psiblast_cs.REAL rpsblast seedtop seqtest tbl2asn test_regexp testcore testobj testval udv vecscreen wblast2.REAL wblast2_cs.REAL" |
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| 19 | |
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| 20 | set manpages "Nentrez.1 Psequin.1 asn2asn.1 asn2ff.1 asn2gb.1 asn2xml.1 asndhuff.1 asntool.1 bl2seq.1 blast.1 blastall.1 blastcl3.1 blastclust.1 blastpgp.1 cdscan.1 checksub.1 copymat.1 ddv.1 debruijn.1 entrcmd.1 entrez2.1 errhdr.1 fa2htgs.1 fastacmd.1 findspl.1 fmerge.1 formatdb.1 gbseqget.1 getfeat.1 getmesh.1 getpub.1 gil2bin.1 idfetch.1 impala.1 indexpub.1 makemat.1 makeset.1 megablast.1 netentcf.1 rpsblast.1 seedtop.1 tbl2asn.1 udv.1 vecscreen.1" |
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| 21 | |
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| 22 | |
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| 23 | destroot { |
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| 24 | xinstall -d 755 ${destroot}${prefix}/share/doc/${name} |
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| 25 | file copy ${worksrcpath}/ncbi/doc ${destroot}${prefix}/share/doc/${name} |
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| 26 | foreach binary ${binaries} { |
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| 27 | xinstall -m 755 ${worksrcpath}/ncbi/bin/${binary} ${destroot}${prefix}/bin/ |
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| 28 | } |
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| 29 | foreach manpage ${manpages} { |
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| 30 | xinstall -m 444 ${worksrcpath}/ncbi/doc/man/${manpage} ${destroot}${prefix}/share/man/man1/ |
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| 31 | } |
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| 32 | } |
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| 33 | |
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| 34 | long_description ${description} |
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| 35 | |
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