Ticket #17935: Portfile.2

# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
# $Id: Portfile 44414 2008-12-28 05:42:53Z mcalhoun@macports.org $

PortSystem              1.0
PortGroup               python25 1.0

name                    py25-pymvpa
version                 current
categories              python
platforms               darwin
maintainers             jameskyle@ucla.edu
description             PyMVPA is a Python module intended to ease pattern classification analyses of large datasets.
long_description        ${description}. In the neuroimaging contexts such analysis techniques are also known as decoding or MVPA analysis. PyMVPA provides high-level abstraction of typical processing steps and a number of implementations of some popular algorithms.

homepage                http://www.pymvpa.org
fetch.type              git
git.url                 git://git.debian.org/git/pkg-exppsy/pymvpa.git

depends_lib             port:py25-numpy 
configure.args                                  

build.env               CFLAGS='-I${prefix}/include -L${prefix}/lib'

patch.pre_args          -p1
patchfiles              patch-mvpa.diff

variant scipy description {Add support for scipy libraries} {
    depends_lib-append port:py25-scipy
}

variant pynifti description {Add support for the Nifti file format} {
    depends_lib-append port:py25-pynifti
}

variant hcluster description {perform cluster analysis and plot dendograms of results} {
    depends_lib-append port:py25-hcluster
}

variant libsvm description {compile the libsvm classifier extension} {
    depends_lib-append port:libsvm \
                       port:swig
    configure.args          --with-libsvm
}

build {
    system "cd ${worksrcpath} && ${build.env} python2.5 setup.py build_ext ${configure.args}"
}