| 1 | DEBUG: Found port in file:///Users/snc/ports/python/py26-rpy2 |
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| 2 | DEBUG: Changing to port directory: /Users/snc/ports/python/py26-rpy2 |
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| 3 | DEBUG: setting option os.universal_supported to yes |
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| 4 | DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
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| 5 | DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
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| 6 | DEBUG: Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/python26-1.0.tcl |
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| 7 | DEBUG: not using configure, so not adding the default universal variant |
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| 8 | DEBUG: Requested variant darwin is not provided by port py26-rpy2. |
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| 9 | DEBUG: Requested variant i386 is not provided by port py26-rpy2. |
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| 10 | DEBUG: Requested variant macosx is not provided by port py26-rpy2. |
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| 11 | DEBUG: Found port in file:///opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/python26 |
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| 12 | DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/python26 |
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| 13 | DEBUG: setting option os.universal_supported to yes |
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| 14 | DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
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| 15 | DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
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| 16 | DEBUG: Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl |
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| 17 | DEBUG: universal variant already exists, so not adding the default one |
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| 18 | DEBUG: Requested variant i386 is not provided by port python26. |
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| 19 | DEBUG: Requested variant macosx is not provided by port python26. |
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| 20 | DEBUG: Executing variant darwin provides darwin |
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| 21 | DEBUG: Searching for dependency: python26 |
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| 22 | DEBUG: Found Dependency: receipt exists for python26 |
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| 23 | DEBUG: Found port in file:///opt/local/var/macports/sources/rsync.macports.org/release/ports/math/R |
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| 24 | DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/math/R |
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| 25 | DEBUG: setting option os.universal_supported to yes |
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| 26 | DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
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| 27 | DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
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| 28 | DEBUG: 'universal_variant no' specified, so not adding the default universal variant |
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| 29 | DEBUG: Requested variant darwin is not provided by port R. |
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| 30 | DEBUG: Requested variant i386 is not provided by port R. |
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| 31 | DEBUG: Requested variant macosx is not provided by port R. |
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| 32 | DEBUG: Executing variant gcc43 provides gcc43 |
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| 33 | DEBUG: Searching for dependency: R |
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| 34 | DEBUG: Found Dependency: receipt exists for R |
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| 35 | DEBUG: Found port in file:///opt/local/var/macports/sources/rsync.macports.org/release/ports/python/py26-numeric |
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| 36 | DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/python/py26-numeric |
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| 37 | DEBUG: setting option os.universal_supported to yes |
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| 38 | DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
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| 39 | DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
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| 40 | DEBUG: Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/python26-1.0.tcl |
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| 41 | DEBUG: not using configure, so not adding the default universal variant |
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| 42 | DEBUG: Requested variant darwin is not provided by port py26-numeric. |
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| 43 | DEBUG: Requested variant i386 is not provided by port py26-numeric. |
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| 44 | DEBUG: Executing variant macosx provides macosx |
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| 45 | DEBUG: Searching for dependency: py26-numeric |
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| 46 | DEBUG: Found Dependency: receipt exists for py26-numeric |
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| 47 | DEBUG: Executing org.macports.main (py26-rpy2) |
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| 48 | DEBUG: Skipping completed org.macports.fetch (py26-rpy2) |
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| 49 | DEBUG: Skipping completed org.macports.checksum (py26-rpy2) |
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| 50 | DEBUG: Skipping completed org.macports.extract (py26-rpy2) |
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| 51 | DEBUG: Skipping completed org.macports.patch (py26-rpy2) |
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| 52 | DEBUG: Skipping completed org.macports.configure (py26-rpy2) |
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| 53 | DEBUG: Executing org.macports.build (py26-rpy2) |
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| 54 | DEBUG: Environment: MACOSX_DEPLOYMENT_TARGET='10.5' |
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| 55 | DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_snc_ports_python_py26-rpy2/work/rpy2-2.0.6" && /opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6 setup.py --no-user-cfg build' |
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| 56 | Error: Target org.macports.build returned: shell command " cd "/opt/local/var/macports/build/_Users_snc_ports_python_py26-rpy2/work/rpy2-2.0.6" && /opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6 setup.py --no-user-cfg build " returned error 1 |
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| 57 | Command output: copying rpy/robjects/tests/testRFunction.py -> build/lib.macosx-10.5-i386-2.6/rpy2/robjects/tests |
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| 58 | copying rpy/robjects/tests/testRObject.py -> build/lib.macosx-10.5-i386-2.6/rpy2/robjects/tests |
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| 59 | copying rpy/robjects/tests/testRobjects.py -> build/lib.macosx-10.5-i386-2.6/rpy2/robjects/tests |
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| 60 | copying rpy/robjects/tests/testRVector.py -> build/lib.macosx-10.5-i386-2.6/rpy2/robjects/tests |
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| 61 | creating build/lib.macosx-10.5-i386-2.6/rpy2/rinterface |
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| 62 | copying rpy/rinterface/__init__.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface |
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| 63 | creating build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 64 | copying rpy/rinterface/tests/__init__.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 65 | copying rpy/rinterface/tests/test_EmbeddedR.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 66 | copying rpy/rinterface/tests/test_Sexp.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 67 | copying rpy/rinterface/tests/test_SexpClosure.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 68 | copying rpy/rinterface/tests/test_SexpEnvironment.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 69 | copying rpy/rinterface/tests/test_SexpVector.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 70 | copying rpy/rinterface/tests/test_SexpVectorNumeric.py -> build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/tests |
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| 71 | running build_ext |
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| 72 | building 'rpy2.rinterface.rinterface' extension |
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| 73 | creating build/temp.macosx-10.5-i386-2.6 |
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| 74 | creating build/temp.macosx-10.5-i386-2.6/rpy |
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| 75 | creating build/temp.macosx-10.5-i386-2.6/rpy/rinterface |
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| 76 | ccache /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/array.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/array.o |
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| 77 | ccache /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/r_utils.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/r_utils.o |
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| 78 | ccache /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/rinterface.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/rinterface.o |
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| 79 | In file included from rpy/rinterface/rinterface.c:70: |
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| 80 | /opt/local/lib/R/include/R_ext/Rdynload.h:26: warning: function declaration isn't a prototype |
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| 81 | rpy/rinterface/rinterface.c:104: warning: 'interrupt_R' defined but not used |
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| 82 | rpy/rinterface/rinterface.c:2676: warning: 'externalMethods' defined but not used |
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| 83 | ccache /usr/bin/gcc-4.0 -L/opt/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.5-i386-2.6/rpy/rinterface/array.o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/r_utils.o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/rinterface.o -L/opt/local/lib/R/lib -L/opt/local/lib/R/modules -L/opt/local/lib/R/lib -L/opt/local/lib/R/modules -lR -o build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/rinterface.so -L/opt/local/lib/R/lib -lR -dylib_file libRblas.dylib:/opt/local/lib/R/lib/libRblas.dylib -L/opt/local/lib/R/lib -lRlapack -L/opt/local/lib/R/lib -lRblas |
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| 84 | ld: library not found for -lR -dylib_file libRblas.dylib:/opt/local/lib/R/lib/libRblas.dylib |
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| 85 | collect2: ld returned 1 exit status |
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| 86 | error: command 'ccache' failed with exit status 1 |
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| 87 | |
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| 88 | Error: Status 1 encountered during processing. |
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