1 | sudo port -dv build openmpi |
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2 | DEBUG: Found port in file:///Users/mmoll/src/macports/dports/science/openmpi |
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3 | DEBUG: Changing to port directory: /Users/mmoll/src/macports/dports/science/openmpi |
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4 | DEBUG: OS Platform: darwin |
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5 | DEBUG: OS Version: 9.7.0 |
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6 | DEBUG: Mac OS X Version: 10.5 |
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7 | DEBUG: System Arch: i386 |
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8 | DEBUG: setting option os.universal_supported to yes |
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9 | DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
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10 | DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
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11 | DEBUG: adding the default universal variant |
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12 | DEBUG: Reading variant descriptions from /Users/mmoll/src/macports/dports/_resources/port1.0/variant_descriptions.conf |
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13 | DEBUG: Requested variant darwin is not provided by port openmpi. |
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14 | DEBUG: Requested variant i386 is not provided by port openmpi. |
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15 | DEBUG: Requested variant no_x11 is not provided by port openmpi. |
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16 | DEBUG: Requested variant system_x11 is not provided by port openmpi. |
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17 | DEBUG: Requested variant macosx is not provided by port openmpi. |
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18 | DEBUG: Requested variant quartz is not provided by port openmpi. |
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19 | DEBUG: Executing variant gcc43 provides gcc43 |
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20 | Portfile changed since last build; discarding previous state. |
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21 | DEBUG: delete: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work |
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22 | ---> Computing dependencies for openmpi |
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23 | DEBUG: Searching for dependency: gcc43 |
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24 | DEBUG: Found Dependency: receipt exists for gcc43 |
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25 | |
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26 | DEBUG: Executing org.macports.main (openmpi) |
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27 | ---> Fetching openmpi |
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28 | DEBUG: Executing org.macports.fetch (openmpi) |
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29 | ---> Verifying checksum(s) for openmpi |
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30 | DEBUG: Executing org.macports.checksum (openmpi) |
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31 | ---> Checksumming openmpi-1.3.3.tar.bz2 |
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32 | DEBUG: Correct (md5) checksum for openmpi-1.3.3.tar.bz2 |
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33 | DEBUG: Correct (sha1) checksum for openmpi-1.3.3.tar.bz2 |
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34 | DEBUG: Correct (rmd160) checksum for openmpi-1.3.3.tar.bz2 |
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35 | DEBUG: setting option extract.cmd to /usr/bin/bzip2 |
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36 | ---> Extracting openmpi |
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37 | DEBUG: Executing proc-pre-org.macports.extract-extract-0 |
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38 | DEBUG: Executing org.macports.extract (openmpi) |
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39 | ---> Extracting openmpi-1.3.3.tar.bz2 |
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40 | DEBUG: setting option extract.args to /opt/local/var/macports/distfiles/openmpi/openmpi-1.3.3.tar.bz2 |
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41 | DEBUG: Environment: MACOSX_DEPLOYMENT_TARGET='10.5' |
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42 | DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work" && /usr/bin/bzip2 -dc /opt/local/var/macports/distfiles/openmpi/openmpi-1.3.3.tar.bz2 | /usr/bin/gnutar --no-same-owner -xf -' |
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43 | DEBUG: Executing org.macports.patch (openmpi) |
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44 | ---> Configuring openmpi |
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45 | DEBUG: Using compiler 'Mac OS X gcc 4.0' |
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46 | DEBUG: Executing org.macports.configure (openmpi) |
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47 | DEBUG: Environment: CFLAGS='-O2 -arch i386' CPPFLAGS='-I/opt/local/include' CXXFLAGS='-O2 -arch i386' MACOSX_DEPLOYMENT_TARGET='10.5' CPP='/usr/bin/cpp-4.0' CXX='/usr/bin/g++-4.0' F90FLAGS='-O2 -arch i386' LDFLAGS='-L/opt/local/lib -arch i386' FCFLAGS='-O2 -arch i386' OBJC='/usr/bin/gcc-4.0' INSTALL='/usr/bin/install -c' FC='/opt/local/bin/gfortran-mp-4.3' FFLAGS='-O2 -arch i386' OBJCFLAGS='-O2 -arch i386' F77='/opt/local/bin/gfortran-mp-4.3' CC='/usr/bin/gcc-4.0' |
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48 | DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90' |
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49 | configure: WARNING: unrecognized options: --enable-f77, --enable-f90 |
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50 | checking for a BSD-compatible install... /usr/bin/install -c |
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51 | checking whether build environment is sane... yes |
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52 | checking for a thread-safe mkdir -p... /opt/local/bin/gmkdir -p |
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53 | checking for gawk... no |
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54 | checking for mawk... no |
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55 | checking for nawk... no |
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56 | checking for awk... awk |
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57 | checking whether make sets $(MAKE)... yes |
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58 | checking how to create a ustar tar archive... gnutar |
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59 | |
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60 | ============================================================================ |
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61 | == Configuring Open MPI |
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62 | ============================================================================ |
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63 | |
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64 | *** Checking versions |
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65 | checking Open MPI version... 1.3.3 |
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66 | checking Open MPI release date... Jul 14, 2009 |
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67 | checking Open MPI Subversion repository version... r21666 |
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68 | checking Open Run-Time Environment version... 1.3.3 |
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69 | checking Open Run-Time Environment release date... Jul 14, 2009 |
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70 | checking Open Run-Time Environment Subversion repository version... r21666 |
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71 | checking Open Portable Access Layer version... 1.3.3 |
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72 | checking Open Portable Access Layer release date... Jul 14, 2009 |
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73 | checking Open Portable Access Layer Subversion repository version... r21666 |
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74 | |
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75 | *** Initialization, setup |
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76 | configure: builddir: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build |
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77 | configure: srcdir: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3 |
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78 | configure: Detected VPATH build |
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79 | checking build system type... i386-apple-darwin9.7.0 |
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80 | checking host system type... i386-apple-darwin9.7.0 |
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81 | installing to directory "/opt/local" |
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82 | |
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83 | *** Configuration options |
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84 | checking whether to run code coverage... no |
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85 | checking whether to compile with branch probabilities... no |
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86 | checking whether to debug memory usage... no |
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87 | checking whether to profile memory usage... no |
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88 | checking if want developer-level compiler pickyness... no |
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89 | checking if want developer-level debugging code... no |
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90 | checking if want sparse process groups... no |
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91 | checking if want Fortran 77 bindings... yes |
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92 | checking if want Fortran 90 bindings... yes |
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93 | checking desired Fortran 90 bindings "size"... small |
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94 | checking whether to enable PMPI... yes |
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95 | checking if want C++ bindings... yes |
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96 | checking if want MPI::SEEK_SET support... yes |
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97 | checking if want to enable weak symbol support... yes |
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98 | checking if want run-time MPI parameter checking... runtime |
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99 | checking if want to install OMPI header files... no |
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100 | checking if want pretty-print stacktrace... yes |
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101 | checking if peruse support is required... no |
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102 | checking max supported array dimension in F90 MPI bindings... 4 |
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103 | checking if pty support should be enabled... yes |
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104 | checking if user wants dlopen support... yes |
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105 | checking if heterogeneous support should be enabled... no |
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106 | checking if want trace file debugging... no |
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107 | checking if want full RTE support... yes |
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108 | checking if want fault tolerance... Disabled fault tolerance |
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109 | checking if want IPv6 support... yes (if underlying system supports it) |
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110 | checking if want orterun "--prefix" behavior to be enabled by default... no |
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111 | checking for package/brand string... Open MPI root@gort.cs.rice.edu Distribution |
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112 | checking for ident string... 1.3.3 |
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113 | checking whether to add padding to the openib control header... no |
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114 | checking whether to use an alternative checksum algo for messages... no |
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115 | |
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116 | ============================================================================ |
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117 | == Compiler and preprocessor tests |
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118 | ============================================================================ |
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119 | |
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120 | *** C compiler and preprocessor |
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121 | checking for style of include used by make... GNU |
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122 | checking for gcc... /usr/bin/gcc-4.0 |
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123 | checking for C compiler default output file name... a.out |
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124 | checking whether the C compiler works... yes |
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125 | checking whether we are cross compiling... no |
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126 | checking for suffix of executables... |
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127 | checking for suffix of object files... o |
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128 | checking whether we are using the GNU C compiler... yes |
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129 | checking whether /usr/bin/gcc-4.0 accepts -g... yes |
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130 | checking for /usr/bin/gcc-4.0 option to accept ISO C89... none needed |
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131 | checking dependency style of /usr/bin/gcc-4.0... gcc3 |
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132 | checking whether /usr/bin/gcc-4.0 and cc understand -c and -o together... yes |
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133 | checking how to run the C preprocessor... /usr/bin/cpp-4.0 |
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134 | checking for grep that handles long lines and -e... /usr/bin/grep |
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135 | checking for egrep... /usr/bin/grep -E |
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136 | checking for the C compiler vendor... gnu |
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137 | checking for ANSI C header files... yes |
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138 | checking if /usr/bin/gcc-4.0 supports -finline-functions... yes |
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139 | checking if /usr/bin/gcc-4.0 supports -fno-strict-aliasing... yes |
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140 | configure: WARNING: -fno-strict-aliasing has been added to CFLAGS |
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141 | checking if /usr/bin/gcc-4.0 supports __builtin_expect... yes |
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142 | checking if /usr/bin/gcc-4.0 supports __builtin_prefetch... yes |
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143 | checking for C optimization flags... -DNDEBUG -O2 -arch i386 -finline-functions -fno-strict-aliasing |
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144 | checking for Interix environment... no |
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145 | checking for C ident string support... static const char |
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146 | checking for sys/types.h... yes |
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147 | checking for sys/stat.h... yes |
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148 | checking for stdlib.h... yes |
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149 | checking for string.h... yes |
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150 | checking for memory.h... yes |
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151 | checking for strings.h... yes |
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152 | checking for inttypes.h... yes |
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153 | checking for stdint.h... yes |
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154 | checking for unistd.h... yes |
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155 | checking for long long... yes |
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156 | checking for long double... yes |
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157 | checking for int8_t... yes |
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158 | checking for uint8_t... yes |
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159 | checking for int16_t... yes |
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160 | checking for uint16_t... yes |
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161 | checking for int32_t... yes |
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162 | checking for uint32_t... yes |
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163 | checking for int64_t... yes |
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164 | checking for uint64_t... yes |
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165 | checking for intptr_t... yes |
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166 | checking for uintptr_t... yes |
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167 | checking for mode_t... yes |
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168 | checking for ssize_t... yes |
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169 | checking for ptrdiff_t... yes |
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170 | checking size of char... 1 |
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171 | checking size of short... 2 |
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172 | checking size of int... 4 |
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173 | checking size of long... 4 |
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174 | checking size of long long... 8 |
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175 | checking size of long double... 16 |
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176 | checking size of float... 4 |
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177 | checking size of double... 8 |
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178 | checking size of void *... 4 |
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179 | checking size of size_t... 4 |
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180 | checking size of ssize_t... 4 |
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181 | checking size of ptrdiff_t... 4 |
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182 | checking alignment of char... 1 |
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183 | checking alignment of short... 2 |
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184 | checking alignment of wchar_t... 4 |
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185 | checking alignment of int... 4 |
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186 | checking alignment of long... 4 |
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187 | checking alignment of long long... 4 |
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188 | checking alignment of float... 4 |
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189 | checking alignment of double... 4 |
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190 | checking alignment of long double... 16 |
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191 | checking alignment of void *... 4 |
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192 | checking for C bool type... no |
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193 | checking for inline... __inline__ |
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194 | checking for C/C++ restrict keyword... __restrict |
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195 | checking for weak symbol support... no |
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196 | checking for functional offsetof macro... yes |
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197 | |
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198 | *** C++ compiler and preprocessor |
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199 | checking whether we are using the GNU C++ compiler... yes |
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200 | checking whether /usr/bin/g++-4.0 accepts -g... yes |
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201 | checking dependency style of /usr/bin/g++-4.0... gcc3 |
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202 | checking how to run the C++ preprocessor... /usr/bin/g++-4.0 -E |
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203 | checking for the C++ compiler vendor... gnu |
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204 | checking if C++ compiler works... yes |
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205 | checking if /usr/bin/g++-4.0 supports -finline-functions... yes |
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206 | configure: WARNING: -finline-functions has been added to CXXFLAGS |
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207 | checking if want C++ exception handling... no |
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208 | checking if C and C++ are link compatible... yes |
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209 | checking for C++ template_repository_directory... not used |
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210 | checking for C++ compiler template parameters... none needed |
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211 | checking if /usr/bin/g++-4.0 supports __builtin_expect... yes |
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212 | checking if /usr/bin/g++-4.0 supports __builtin_prefetch... yes |
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213 | checking if /usr/bin/g++-4.0 supports const_cast<> properly... yes |
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214 | checking for C++ optimization flags... -DNDEBUG -O2 -arch i386 -finline-functions |
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215 | checking for C++ ident string support... static const char |
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216 | checking size of bool... 1 |
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217 | checking alignment of bool... 1 |
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218 | checking for __attribute__... yes |
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219 | checking for __attribute__(aligned)... yes |
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220 | checking for __attribute__(always_inline)... yes |
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221 | checking for __attribute__(cold)... no |
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222 | checking for __attribute__(const)... yes |
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223 | checking for __attribute__(deprecated)... yes |
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224 | checking for __attribute__(format)... yes |
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225 | checking for __attribute__(hot)... no |
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226 | checking for __attribute__(malloc)... yes |
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227 | checking for __attribute__(may_alias)... yes |
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228 | checking for __attribute__(no_instrument_function)... yes |
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229 | checking for __attribute__(nonnull)... yes |
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230 | checking for __attribute__(noreturn)... yes |
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231 | checking for __attribute__(packed)... yes |
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232 | checking for __attribute__(pure)... yes |
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233 | checking for __attribute__(sentinel)... yes |
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234 | checking for __attribute__(unused)... yes |
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235 | checking for __attribute__(visibility)... yes |
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236 | checking for __attribute__(warn_unused_result)... yes |
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237 | checking for __attribute__(weak_alias)... no |
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238 | |
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239 | *** Assembler |
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240 | checking dependency style of /usr/bin/gcc-4.0... gcc3 |
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241 | checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -p |
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242 | checking the name lister (/usr/bin/nm -p) interface... BSD nm |
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243 | checking for fgrep... /usr/bin/grep -F |
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244 | checking if need to remove -g from CCASFLAGS... OS X Leopard - yes ( -DNDEBUG -O2 -arch i386 -finline-functions -fno-strict-aliasing) |
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245 | checking whether to enable smp locks... yes |
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246 | checking if .proc/endp is needed... no |
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247 | checking directive for setting text section... .text |
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248 | checking directive for exporting symbols... .globl |
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249 | checking for objdump... no |
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250 | checking if .note.GNU-stack is needed... no |
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251 | checking suffix for labels... : |
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252 | checking prefix for global symbol labels... _ |
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253 | checking prefix for lsym labels... L |
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254 | checking prefix for function in .type... |
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255 | checking if .size is needed... no |
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256 | checking if .align directive takes logarithmic value... yes |
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257 | checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes |
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258 | checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no |
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259 | checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no |
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260 | checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes |
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261 | checking if /usr/bin/g++-4.0 supports DEC inline assembly... no |
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262 | checking if /usr/bin/g++-4.0 supports XLC inline assembly... no |
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263 | checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0 |
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264 | checking for asssembly architecture... IA32 |
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265 | checking for perl... perl |
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266 | checking for pre-built assembly file... yes (atomic-ia32-osx.s) |
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267 | checking for atomic assembly filename... atomic-ia32-osx.s |
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268 | |
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269 | *** Fortran 77 compiler |
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270 | checking whether we are using the GNU Fortran 77 compiler... no |
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271 | checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes |
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272 | checking if Fortran 77 compiler works... no |
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273 | ********************************************************************** |
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274 | * It appears that your Fortran 77 compiler is unable to produce working |
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275 | * executables. A simple test application failed to properly |
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276 | * execute. Note that this is likely not a problem with Open MPI, |
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277 | * but a problem with the local compiler installation. More |
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278 | * information (including exactly what command was given to the |
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279 | * compiler and what error resulted when the command was executed) is |
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280 | * available in the config.log file in this directory. |
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281 | ********************************************************************** |
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282 | configure: error: Could not run a simple Fortran 77 program. Aborting. |
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283 | Error: Target org.macports.configure returned: configure failure: shell command " cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90 " returned error 1 |
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284 | Command output: checking prefix for lsym labels... L |
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285 | checking prefix for function in .type... |
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286 | checking if .size is needed... no |
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287 | checking if .align directive takes logarithmic value... yes |
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288 | checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes |
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289 | checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no |
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290 | checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no |
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291 | checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes |
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292 | checking if /usr/bin/g++-4.0 supports DEC inline assembly... no |
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293 | checking if /usr/bin/g++-4.0 supports XLC inline assembly... no |
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294 | checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0 |
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295 | checking for asssembly architecture... IA32 |
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296 | checking for perl... perl |
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297 | checking for pre-built assembly file... yes (atomic-ia32-osx.s) |
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298 | checking for atomic assembly filename... atomic-ia32-osx.s |
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299 | |
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300 | *** Fortran 77 compiler |
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301 | checking whether we are using the GNU Fortran 77 compiler... no |
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302 | checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes |
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303 | checking if Fortran 77 compiler works... no |
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304 | ********************************************************************** |
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305 | * It appears that your Fortran 77 compiler is unable to produce working |
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306 | * executables. A simple test application failed to properly |
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307 | * execute. Note that this is likely not a problem with Open MPI, |
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308 | * but a problem with the local compiler installation. More |
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309 | * information (including exactly what command was given to the |
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310 | * compiler and what error resulted when the command was executed) is |
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311 | * available in the config.log file in this directory. |
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312 | ********************************************************************** |
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313 | configure: error: Could not run a simple Fortran 77 program. Aborting. |
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314 | |
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315 | DEBUG: Backtrace: configure failure: shell command " cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90 " returned error 1 |
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316 | Command output: checking prefix for lsym labels... L |
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317 | checking prefix for function in .type... |
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318 | checking if .size is needed... no |
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319 | checking if .align directive takes logarithmic value... yes |
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320 | checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes |
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321 | checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no |
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322 | checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no |
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323 | checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes |
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324 | checking if /usr/bin/g++-4.0 supports DEC inline assembly... no |
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325 | checking if /usr/bin/g++-4.0 supports XLC inline assembly... no |
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326 | checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0 |
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327 | checking for asssembly architecture... IA32 |
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328 | checking for perl... perl |
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329 | checking for pre-built assembly file... yes (atomic-ia32-osx.s) |
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330 | checking for atomic assembly filename... atomic-ia32-osx.s |
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331 | |
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332 | *** Fortran 77 compiler |
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333 | checking whether we are using the GNU Fortran 77 compiler... no |
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334 | checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes |
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335 | checking if Fortran 77 compiler works... no |
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336 | ********************************************************************** |
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337 | * It appears that your Fortran 77 compiler is unable to produce working |
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338 | * executables. A simple test application failed to properly |
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339 | * execute. Note that this is likely not a problem with Open MPI, |
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340 | * but a problem with the local compiler installation. More |
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341 | * information (including exactly what command was given to the |
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342 | * compiler and what error resulted when the command was executed) is |
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343 | * available in the config.log file in this directory. |
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344 | ********************************************************************** |
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345 | configure: error: Could not run a simple Fortran 77 program. Aborting. |
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346 | |
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347 | while executing |
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348 | "$procedure $targetname" |
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349 | Warning: the following items did not execute (for openmpi): org.macports.build org.macports.configure |
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350 | Error: Status 1 encountered during processing. |
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