| 1 | # -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4 |
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| 2 | # $Id: Portfile 72419 2010-10-14 08:17:54Z ryandesign@macports.org $ |
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| 3 | |
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| 4 | PortSystem 1.0 |
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| 5 | |
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| 6 | name samtools |
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| 7 | version 0.1.12a |
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| 8 | categories science |
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| 9 | platforms darwin |
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| 10 | maintainers gmail.com:haroldpimentel openmaintainer |
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| 11 | license MIT |
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| 12 | |
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| 13 | description Tools for alignments in the SAM format |
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| 14 | |
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| 15 | long_description SAM (Sequence Alignment/Map) Tools provide various \ |
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| 16 | utilities for manipulating alignments in the SAM \ |
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| 17 | format, including sorting, merging, indexing and \ |
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| 18 | generating alignments in a per-position format. |
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| 19 | |
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| 20 | homepage http://samtools.sourceforge.net/ |
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| 21 | master_sites sourceforge |
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| 22 | |
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| 23 | checksums sha1 d517cd189aa714251a0e43cb83dea3ae0f29bffa \ |
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| 24 | rmd160 e2732e61b216bc2d8e6a1c81aa91c34f296cef29 |
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| 25 | |
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| 26 | use_bzip2 yes |
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| 27 | |
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| 28 | depends_lib port:zlib |
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| 29 | |
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| 30 | use_configure no |
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| 31 | |
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| 32 | destroot { |
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| 33 | xinstall -m 755 ${worksrcpath}/samtools ${destroot}${prefix}/bin |
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| 34 | xinstall -m 644 ${worksrcpath}/libbam.a ${destroot}${prefix}/lib |
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| 35 | xinstall -d ${destroot}${prefix}/include/bam |
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| 36 | eval xinstall -m 644 [glob ${worksrcpath}/*.h] ${destroot}${prefix}/include/bam |
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| 37 | |
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| 38 | xinstall -d ${destroot}${prefix}/share/doc/${name} |
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| 39 | xinstall -m 644 -W ${worksrcpath} \ |
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| 40 | AUTHORS COPYING ChangeLog NEWS \ |
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| 41 | ${destroot}${prefix}/share/doc/${name} |
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| 42 | } |
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