Ticket #28113: Portfile

File Portfile, 1.2 KB (added by haroldpimentel@…, 14 years ago)
Line 
1# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
2# $Id: Portfile 72870 2010-10-29 07:09:11Z ryandesign@macports.org $
3
4PortSystem          1.0
5
6name                tophat
7version             1.2.0
8categories          science biology
9platforms           darwin
10maintainers         gmail.com:haroldpimentel openmaintainer
11
12description         a fast splice junction mapper for RNA-Seq reads
13
14long_description    TopHat is ${description}. It aligns RNA-Seq reads to \
15                    mammalian-sized genomes using the ultra high-throughput \
16                    short read aligner Bowtie, and then analyzes the mapping \
17                    results to identify splice junctions between exons.
18
19homepage            http://tophat.cbcb.umd.edu/
20master_sites        ${homepage}downloads/
21
22checksums           sha1        0e697b16c64fa12180b93ecf87fdf25f722973a5 \
23                    rmd160      da62ddc6b2bf8deeda19a95965b1ff2cfd4b95b2
24
25use_parallel_build  no
26
27depends_lib         port:zlib \
28                    port:samtools \
29                    port:bowtie
30
31# samtools and bowtie are not universal
32universal_variant   no