Ticket #33633: main.log

version:1
:msg:main --->  Computing dependencies for seqan:msg:main 
:debug:main Searching for dependency: unzip
:debug:main Didn't find receipt, going to depspec regex for: unzip
:debug:main Found Dependency: path: /usr/bin filename: unzip regex: ^unzip$
:debug:main Found Dependency: path: /usr/bin filename: unzip regex: ^unzip$
:debug:main Searching for dependency: cmake
:debug:main Found Dependency: receipt exists for cmake
:debug:main Searching for dependency: python27
:debug:main Found Dependency: receipt exists for python27
:debug:main Executing org.macports.main (seqan)
:debug:main changing euid/egid - current euid: 0 - current egid: 0
:debug:main egid changed to: 528
:debug:main euid changed to: 528
:debug:main Skipping completed org.macports.archivefetch (seqan)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:fetch fetch phase started at Wed Mar 14 21:23:07 CDT 2012
:notice:fetch --->  Fetching seqan
:debug:fetch euid/egid changed to: 0/0
:debug:fetch chowned /i386-10.6-mp/var/macports/distfiles/seqan/1.3.1_1 to macports
:debug:fetch euid/egid changed to: 528/528
:debug:fetch Executing org.macports.fetch (seqan)
:info:fetch --->  seqan-1.3.1.zip doesn't seem to exist in /i386-10.6-mp/var/macports/distfiles/seqan/1.3.1_1
:debug:fetch Pinging ftp.seqan.de...
:debug:fetch Pinging distfiles.macports.org...
:debug:fetch Pinging aarnet.au.distfiles.macports.org...
:debug:fetch Pinging her.gr.distfiles.macports.org...
:debug:fetch Pinging lil.fr.distfiles.macports.org...
:debug:fetch Pinging sea.us.distfiles.macports.org...
:debug:fetch Pinging ykf.ca.distfiles.macports.org...
:debug:fetch ftp.seqan.de ping time is 10000
:debug:fetch distfiles.macports.org ping time is 134.463
:debug:fetch aarnet.au.distfiles.macports.org ping time is 220.654
:debug:fetch her.gr.distfiles.macports.org ping time is 204.561
:debug:fetch lil.fr.distfiles.macports.org ping time is 126.670
:debug:fetch sea.us.distfiles.macports.org ping time is 10000
:debug:fetch ykf.ca.distfiles.macports.org ping time is 70.758
:notice:fetch --->  Attempting to fetch seqan-1.3.1.zip from http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/seqan/1.3.1_1
:debug:fetch Fetching failed:: The requested URL returned error: 404
:notice:fetch --->  Attempting to fetch seqan-1.3.1.zip from http://lil.fr.distfiles.macports.org/seqan/1.3.1_1
:debug:fetch Privilege de-escalation not attempted as not running as root.
:debug:checksum checksum phase started at Wed Mar 14 21:23:32 CDT 2012
:notice:checksum --->  Verifying checksum(s) for seqan
:debug:checksum Executing org.macports.checksum (seqan)
:info:checksum --->  Checksumming seqan-1.3.1.zip
:debug:checksum Correct (rmd160) checksum for seqan-1.3.1.zip
:debug:checksum Correct (sha256) checksum for seqan-1.3.1.zip
:debug:checksum Privilege de-escalation not attempted as not running as root.
:debug:extract extract phase started at Wed Mar 14 21:23:32 CDT 2012
:notice:extract --->  Extracting seqan
:debug:extract setting option extract.cmd to /usr/bin/unzip
:debug:extract setting option extract.pre_args to -q
:debug:extract setting option extract.post_args to {-d /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work}
:debug:extract Executing org.macports.extract (seqan)
:info:extract --->  Extracting seqan-1.3.1.zip
:debug:extract setting option extract.args to '/i386-10.6-mp/var/macports/distfiles/seqan/1.3.1_1/seqan-1.3.1.zip'
:debug:extract Environment: CPATH='/i386-10.6-mp/include' CC_PRINT_OPTIONS_FILE='/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/i386-10.6-mp/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6'
:debug:extract Assembled command: 'cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work" && /usr/bin/unzip -q '/i386-10.6-mp/var/macports/distfiles/seqan/1.3.1_1/seqan-1.3.1.zip' -d /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work'
:debug:extract Executing command line:  cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work" && /usr/bin/unzip -q '/i386-10.6-mp/var/macports/distfiles/seqan/1.3.1_1/seqan-1.3.1.zip' -d /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work 
:debug:extract euid/egid changed to: 0/0
:debug:extract chowned /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work to macports
:debug:extract euid/egid changed to: 528/528
:debug:extract Privilege de-escalation not attempted as not running as root.
:debug:patch patch phase started at Wed Mar 14 21:23:37 CDT 2012
:debug:patch Executing org.macports.patch (seqan)
:debug:patch Privilege de-escalation not attempted as not running as root.
:debug:configure configure phase started at Wed Mar 14 21:23:37 CDT 2012
:notice:configure --->  Configuring seqan
:debug:configure Using compiler 'Mac OS X gcc 4.2'
:debug:configure Executing org.macports.configure (seqan)
:debug:configure Environment: CPATH='/i386-10.6-mp/include' CFLAGS='-pipe -O2 -arch i386' CPPFLAGS='-I/i386-10.6-mp/include' CXXFLAGS='-pipe -O2 -arch i386' LIBRARY_PATH='/i386-10.6-mp/lib' MACOSX_DEPLOYMENT_TARGET='10.6' CXX='/usr/bin/g++-4.2' CC_PRINT_OPTIONS_FILE='/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -O2 -m32' LDFLAGS='-L/i386-10.6-mp/lib -arch i386' OBJC='/usr/bin/gcc-4.2' FCFLAGS='-pipe -O2 -m32' INSTALL='/usr/bin/install -c' OBJCFLAGS='-pipe -O2 -arch i386' FFLAGS='-pipe -O2 -m32' CC_PRINT_OPTIONS='YES' CC='/usr/bin/gcc-4.2'
:debug:configure Assembled command: 'cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake" && cmake -DCMAKE_INSTALL_PREFIX=/i386-10.6-mp -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=/i386-10.6-mp/bin/python2.7'
:debug:configure Executing command line:  cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake" && cmake -DCMAKE_INSTALL_PREFIX=/i386-10.6-mp -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=/i386-10.6-mp/bin/python2.7 
:info:configure -- The C compiler identification is GNU
:info:configure -- The CXX compiler identification is GNU
:info:configure -- Checking whether C compiler has -isysroot
:info:configure -- Checking whether C compiler has -isysroot - yes
:info:configure -- Checking whether C compiler supports OSX deployment target flag
:info:configure -- Checking whether C compiler supports OSX deployment target flag - yes
:info:configure -- Check for working C compiler: /usr/bin/gcc-4.2
:info:configure -- Check for working C compiler: /usr/bin/gcc-4.2 -- works
:info:configure -- Detecting C compiler ABI info
:info:configure -- Detecting C compiler ABI info - done
:info:configure -- Checking whether CXX compiler has -isysroot
:info:configure -- Checking whether CXX compiler has -isysroot - yes
:info:configure -- Checking whether CXX compiler supports OSX deployment target flag
:info:configure -- Checking whether CXX compiler supports OSX deployment target flag - yes
:info:configure -- Check for working CXX compiler: /usr/bin/g++-4.2
:info:configure -- Check for working CXX compiler: /usr/bin/g++-4.2 -- works
:info:configure -- Detecting CXX compiler ABI info
:info:configure -- Detecting CXX compiler ABI info - done
:info:configure -- Found PythonInterp: /i386-10.6-mp/bin/python2.7 (found version "2.7.2")
:info:configure Determining GCC version.
:info:configure   GCC version is 421
:info:configure -- Try OpenMP C flag = [-fopenmp]
:info:configure -- Performing Test OpenMP_FLAG_DETECTED
:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Success
:info:configure -- Try OpenMP CXX flag = [-fopenmp]
:info:configure -- Performing Test OpenMP_FLAG_DETECTED
:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Success
:info:configure -- Performing Test TR1_SHARED_PTR_USE_TR1_MEMORY
:info:configure -- Performing Test TR1_SHARED_PTR_USE_TR1_MEMORY - Success
:info:configure -- Performing Test TR1_SHARED_PTR_USE_MEMORY
:info:configure -- Performing Test TR1_SHARED_PTR_USE_MEMORY - Failed
:info:configure -- Configuring done
:info:configure -- Generating done
:info:configure -- Build files have been written to: /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake
:debug:configure Privilege de-escalation not attempted as not running as root.
:debug:build build phase started at Wed Mar 14 21:23:47 CDT 2012
:notice:build --->  Building seqan
:debug:build Executing org.macports.build (seqan)
:debug:build Environment: CPATH='/i386-10.6-mp/include' CC_PRINT_OPTIONS_FILE='/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/i386-10.6-mp/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6'
:debug:build Assembled command: 'cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake" && /usr/bin/make -j2 -w all'
:debug:build Executing command line:  cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake" && /usr/bin/make -j2 -w all 
:info:build make: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -H/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake -B/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake --check-build-system CMakeFiles/Makefile.cmake 0
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_start /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles/progress.marks
:info:build /usr/bin/make -f CMakeFiles/Makefile2 all
:info:build make[1]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f libs/samtools/CMakeFiles/bam.dir/build.make libs/samtools/CMakeFiles/bam.dir/depend
:info:build /usr/bin/make -f CMakeFiles/Seqan.dir/build.make CMakeFiles/Seqan.dir/depend
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools/CMakeFiles/bam.dir/DependInfo.cmake --color=
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles/Seqan.dir/DependInfo.cmake --color=
:info:build Scanning dependencies of target Seqan
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f CMakeFiles/Seqan.dir/build.make CMakeFiles/Seqan.dir/build
:info:build Scanning dependencies of target bam
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f libs/samtools/CMakeFiles/bam.dir/build.make libs/samtools/CMakeFiles/bam.dir/build
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 5
:info:build [  1%] Building C object libs/samtools/CMakeFiles/bam.dir/bgzf.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bgzf.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bgzf.c
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build make[2]: Nothing to be done for `CMakeFiles/Seqan.dir/build'.
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [  1%] Built target Seqan
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 6
:info:build [  2%] Building C object libs/samtools/CMakeFiles/bam.dir/kstring.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/kstring.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/kstring.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 7
:info:build [  3%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_aux.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_aux.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_aux.c
:info:build /usr/bin/make -f apps/CMakeFiles/dfi.dir/build.make apps/CMakeFiles/dfi.dir/depend
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps/CMakeFiles/dfi.dir/DependInfo.cmake --color=
:info:build Scanning dependencies of target dfi
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f apps/CMakeFiles/dfi.dir/build.make apps/CMakeFiles/dfi.dir/build
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 19
:info:build [  4%] Building CXX object apps/CMakeFiles/dfi.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/dfi/dfi.cpp.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /usr/bin/g++-4.2    -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/dfi.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/dfi/dfi.cpp.o -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/dfi/dfi.cpp
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [  4%] Building C object libs/samtools/CMakeFiles/bam.dir/bam.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 8
:info:build [  5%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_import.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_import.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_import.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 9
:info:build [  6%] Building C object libs/samtools/CMakeFiles/bam.dir/sam.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/sam.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/sam.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [  6%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_index.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_index.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_index.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 10
:info:build [  7%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_pileup.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_pileup.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_pileup.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 11
:info:build [  8%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_lpileup.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_lpileup.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_lpileup.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [  8%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_md.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_md.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_md.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 12
:info:build [  9%] Building C object libs/samtools/CMakeFiles/bam.dir/glf.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/glf.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/glf.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 13
:info:build [ 10%] Building C object libs/samtools/CMakeFiles/bam.dir/razf.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/razf.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/razf.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 14
:info:build [ 11%] Building C object libs/samtools/CMakeFiles/bam.dir/faidx.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/faidx.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/faidx.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [ 11%] Building C object libs/samtools/CMakeFiles/bam.dir/knetfile.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/knetfile.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/knetfile.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 15
:info:build [ 12%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_sort.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_sort.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_sort.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 16
:info:build [ 13%] Building C object libs/samtools/CMakeFiles/bam.dir/sam_header.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/sam_header.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/sam_header.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [ 13%] Building C object libs/samtools/CMakeFiles/bam.dir/bam_reheader.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/bam_reheader.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/bam_reheader.c
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 17
:info:build [ 14%] Building C object libs/samtools/CMakeFiles/bam.dir/kprobaln.c.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /usr/bin/gcc-4.2  -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -pipe -O2 -arch i386  -O3 -DNDEBUG -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/bam.dir/kprobaln.c.o   -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools/kprobaln.c
:info:build Linking C static library libbam.a
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /i386-10.6-mp/bin/cmake -P CMakeFiles/bam.dir/cmake_clean_target.cmake
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/libs/samtools && /i386-10.6-mp/bin/cmake -E cmake_link_script CMakeFiles/bam.dir/link.txt --verbose=1
:info:build /usr/bin/ar cr libbam.a  CMakeFiles/bam.dir/bgzf.c.o CMakeFiles/bam.dir/kstring.c.o CMakeFiles/bam.dir/bam_aux.c.o CMakeFiles/bam.dir/bam.c.o CMakeFiles/bam.dir/bam_import.c.o CMakeFiles/bam.dir/sam.c.o CMakeFiles/bam.dir/bam_index.c.o CMakeFiles/bam.dir/bam_pileup.c.o CMakeFiles/bam.dir/bam_lpileup.c.o CMakeFiles/bam.dir/bam_md.c.o CMakeFiles/bam.dir/glf.c.o CMakeFiles/bam.dir/razf.c.o CMakeFiles/bam.dir/faidx.c.o CMakeFiles/bam.dir/knetfile.c.o CMakeFiles/bam.dir/bam_sort.c.o CMakeFiles/bam.dir/sam_header.c.o CMakeFiles/bam.dir/bam_reheader.c.o CMakeFiles/bam.dir/kprobaln.c.o
:info:build /usr/bin/ranlib libbam.a
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles  5 6 7 8 9 10 11 12 13 14 15 16 17
:info:build [ 14%] Built target bam
:info:build /usr/bin/make -f apps/CMakeFiles/insegt.dir/build.make apps/CMakeFiles/insegt.dir/depend
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps/CMakeFiles/insegt.dir/DependInfo.cmake --color=
:info:build Scanning dependencies of target insegt
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f apps/CMakeFiles/insegt.dir/build.make apps/CMakeFiles/insegt.dir/build
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 44
:info:build [ 15%] Building CXX object apps/CMakeFiles/insegt.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/insegt.cpp.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /usr/bin/g++-4.2    -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/insegt.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/insegt.cpp.o -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/insegt.cpp
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/basic/basic_aggregates.h: In function ‘void seqan::normalizeAnnoCounts(TAnnoNormStore&, TMapO&, TAnnoCountStore&, seqan::FragmentStore<TSpec, TConfig>&) [with TAnnoNormStore = seqan::String<double, seqan::Alloc<void> >, TMapO = seqan::Map<seqan::Pair<unsigned int, bool, void>, seqan::Skiplist<const seqan::Tag<seqan::Default_> > >, TAnnoCountStore = seqan::String<unsigned int, seqan::Alloc<void> >, TSpec = void, TConfig = seqan::FragmentStoreConfig<void>]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/basic/basic_aggregates.h:83: warning: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ is used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/map/map_skiplist.h:657: note: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/basic/basic_aggregates.h:83: warning: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ is used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/map/map_skiplist.h:657: note: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinFreq, TPred = PredMaxFreq, TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>, TParamPredHull = seqan::String<unsigned int, seqan::Alloc<void> >, TParamPred = seqan::String<unsigned int, seqan::Alloc<void> >, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinFreq, TPred = PredMaxFreq, TAlphabet = unsigned char, TParamPredHull = seqan::String<unsigned int, seqan::Alloc<void> >, TParamPred = seqan::String<unsigned int, seqan::Alloc<void> >, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinAllSupp, TPred = PredEntropy, TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinSupp, TPred = PredEmerging, TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/overlap_module.h: In function ‘void seqan::buildAnnoCountStore(TAnnoCountStore&, seqan::FragmentStore<TSpec, TConfig>&, TReadAnnoStore&) [with TAnnoCountStore = seqan::String<unsigned int, seqan::Alloc<void> >, TSpec = void, TConfig = seqan::FragmentStoreConfig<void>, TReadAnnoStore = seqan::String<seqan::ReadAnnoStoreElement<unsigned int>, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/overlap_module.h:445: warning: ‘secReadId’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinFreq, TPred = PredMaxFreq, TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>, TParamPredHull = seqan::String<unsigned int, seqan::Alloc<void> >, TParamPred = seqan::String<unsigned int, seqan::Alloc<void> >, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinAllSupp, TPred = PredEntropy, TAlphabet = unsigned char, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinSupp, TPred = PredEmerging, TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinAllSupp, TPred = PredEntropy, TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h: In function ‘int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool) [with TPredHull = PredMinSupp, TPred = PredEmerging, TAlphabet = unsigned char, TParamPredHull = double, TParamPred = double, TFileNames = seqan::String<seqan::String<char, seqan::Alloc<void> >, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i1’ was declared here
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: warning: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ may be used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/index/index_wotd.h:866: note: ‘desc.seqan::VertexWotdModified_<long unsigned int>::range.seqan::Pair<long unsigned int, long unsigned int, void>::i2’ was declared here
:info:build Linking CXX executable dfi
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /i386-10.6-mp/bin/cmake -E cmake_link_script CMakeFiles/dfi.dir/link.txt --verbose=1
:info:build /usr/bin/g++-4.2   -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -Wl,-search_paths_first -Wl,-headerpad_max_install_names  -L/i386-10.6-mp/lib -arch i386 CMakeFiles/dfi.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/dfi/dfi.cpp.o  -o dfi  -L/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib -lz 
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles  19
:info:build [ 15%] Built target dfi
:info:build /usr/bin/make -f apps/CMakeFiles/mason.dir/build.make apps/CMakeFiles/mason.dir/depend
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps/CMakeFiles/mason.dir/DependInfo.cmake --color=
:info:build Scanning dependencies of target mason
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f apps/CMakeFiles/mason.dir/build.make apps/CMakeFiles/mason.dir/build
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 47
:info:build [ 16%] Building CXX object apps/CMakeFiles/mason.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/mason.cpp.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /usr/bin/g++-4.2    -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/mason.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/mason.cpp.o -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/mason.cpp
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/basic/basic_aggregates.h: In function ‘void seqan::createAnnoCountGFF(TFile&, TAnnoCountStore&, TAnnoNormStore&, seqan::FragmentStore<TSpec, TConfig>&, TMap&) [with TFile = std::fstream, TAnnoCountStore = seqan::String<unsigned int, seqan::Alloc<void> >, TAnnoNormStore = seqan::String<double, seqan::Alloc<void> >, TSpec = void, TConfig = seqan::FragmentStoreConfig<void>, TMap = seqan::Map<seqan::Pair<unsigned int, bool, void>, seqan::Skiplist<const seqan::Tag<seqan::Default_> > >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/basic/basic_aggregates.h:83: warning: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ is used uninitialized in this function
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/seqan/map/map_skiplist.h:657: note: ‘val_temp.seqan::Pair<unsigned int, bool, void>::i2’ was declared here
:info:build Linking CXX executable insegt
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /i386-10.6-mp/bin/cmake -E cmake_link_script CMakeFiles/insegt.dir/link.txt --verbose=1
:info:build /usr/bin/g++-4.2   -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -Wl,-search_paths_first -Wl,-headerpad_max_install_names  -L/i386-10.6-mp/lib -arch i386 CMakeFiles/insegt.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/insegt/insegt.cpp.o  -o insegt  -L/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib -lz 
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles  44
:info:build [ 16%] Built target insegt
:info:build /usr/bin/make -f apps/CMakeFiles/micro_razers.dir/build.make apps/CMakeFiles/micro_razers.dir/depend
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake && /i386-10.6-mp/bin/cmake -E cmake_depends "Unix Makefiles" /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps/CMakeFiles/micro_razers.dir/DependInfo.cmake --color=
:info:build Scanning dependencies of target micro_razers
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /usr/bin/make -f apps/CMakeFiles/micro_razers.dir/build.make apps/CMakeFiles/micro_razers.dir/build
:info:build make[2]: Entering directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [ 16%] Building CXX object apps/CMakeFiles/micro_razers.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/micro_razers/micro_razers.cpp.o
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /usr/bin/g++-4.2    -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib/samtools -I/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1    -o CMakeFiles/micro_razers.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/micro_razers/micro_razers.cpp.o -c /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/micro_razers/micro_razers.cpp
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/simulate_illumina.h: In function ‘void applySimulationInstructions(TString&, TRNG&, const ReadSimulationInstruction<seqan::Tag<IlluminaReads_> >&, const Options<seqan::Tag<IlluminaReads_> >&) [with TRNG = seqan::Rng<seqan::MersenneTwister>, TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<void> >]’:
:info:build /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/simulate_illumina.h:461: internal compiler error: Segmentation fault
:info:build Please submit a full bug report,
:info:build with preprocessed source if appropriate.
:info:build See <URL:http://developer.apple.com/bugreporter> for instructions.
:info:build {standard input}:1178:non-relocatable subtraction expression, "LC7" minus "L00000000011$pb"
:info:build {standard input}:1178:symbol: "LC7" can't be undefined in a subtraction expression
:info:build {standard input}:1168:non-relocatable subtraction expression, "LC6" minus "L00000000011$pb"
:info:build {standard input}:1168:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:648:non-relocatable subtraction expression, "__ZStL8__ioinit" minus "L00000000007$pb"
:info:build {standard input}:648:symbol: "__ZStL8__ioinit" can't be undefined in a subtraction expression
:info:build {standard input}:122:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000004$pb"
:info:build {standard input}:122:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:33914:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000045$pb"
:info:build {standard input}:33914:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:33703:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000044$pb"
:info:build {standard input}:33703:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:33701:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000044$pb"
:info:build {standard input}:33701:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:32301:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000043$pb"
:info:build {standard input}:32301:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:31640:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000042$pb"
:info:build {standard input}:31640:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:30393:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000041$pb"
:info:build {standard input}:30393:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:29480:non-relocatable subtraction expression, "LC18" minus "L00000000040$pb"
:info:build {standard input}:29480:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:29475:non-relocatable subtraction expression, "LC11" minus "L00000000040$pb"
:info:build {standard input}:29475:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:29366:non-relocatable subtraction expression, "LC12" minus "L00000000040$pb"
:info:build {standard input}:29366:symbol: "LC12" can't be undefined in a subtraction expression
:info:build {standard input}:29357:non-relocatable subtraction expression, "LC21" minus "L00000000040$pb"
:info:build {standard input}:29357:symbol: "LC21" can't be undefined in a subtraction expression
:info:build {standard input}:29351:non-relocatable subtraction expression, "LC20" minus "L00000000040$pb"
:info:build {standard input}:29351:symbol: "LC20" can't be undefined in a subtraction expression
:info:build {standard input}:29349:non-relocatable subtraction expression, "LC19" minus "L00000000040$pb"
:info:build {standard input}:29349:symbol: "LC19" can't be undefined in a subtraction expression
:info:build {standard input}:29343:non-relocatable subtraction expression, "LC11" minus "L00000000040$pb"
:info:build {standard input}:29343:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:29333:non-relocatable subtraction expression, "LC6" minus "L00000000040$pb"
:info:build {standard input}:29333:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:29329:non-relocatable subtraction expression, "LC18" minus "L00000000040$pb"
:info:build {standard input}:29329:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:29326:non-relocatable subtraction expression, "LC11" minus "L00000000040$pb"
:info:build {standard input}:29326:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:29130:non-relocatable subtraction expression, "LC23" minus "L00000000040$pb"
:info:build {standard input}:29130:symbol: "LC23" can't be undefined in a subtraction expression
:info:build {standard input}:29127:non-relocatable subtraction expression, "LC11" minus "L00000000040$pb"
:info:build {standard input}:29127:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:29063:non-relocatable subtraction expression, "LC12" minus "L00000000039$pb"
:info:build {standard input}:29063:symbol: "LC12" can't be undefined in a subtraction expression
:info:build {standard input}:29054:non-relocatable subtraction expression, "LC21" minus "L00000000039$pb"
:info:build {standard input}:29054:symbol: "LC21" can't be undefined in a subtraction expression
:info:build {standard input}:29048:non-relocatable subtraction expression, "LC20" minus "L00000000039$pb"
:info:build {standard input}:29048:symbol: "LC20" can't be undefined in a subtraction expression
:info:build {standard input}:29046:non-relocatable subtraction expression, "LC19" minus "L00000000039$pb"
:info:build {standard input}:29046:symbol: "LC19" can't be undefined in a subtraction expression
:info:build {standard input}:29040:non-relocatable subtraction expression, "LC11" minus "L00000000039$pb"
:info:build {standard input}:29040:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:29029:non-relocatable subtraction expression, "LC6" minus "L00000000039$pb"
:info:build {standard input}:29029:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:29025:non-relocatable subtraction expression, "LC18" minus "L00000000039$pb"
:info:build {standard input}:29025:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:29022:non-relocatable subtraction expression, "LC11" minus "L00000000039$pb"
:info:build {standard input}:29022:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:26730:non-relocatable subtraction expression, "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26730:symbol: "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:26611:non-relocatable subtraction expression, "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26611:symbol: "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:26517:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26517:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:26503:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26503:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:26487:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26487:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:26472:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000037$pb"
:info:build {standard input}:26472:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:25124:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000036$pb"
:info:build {standard input}:25124:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:25122:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableAsciiToDna5_IvE5VALUEE$non_lazy_ptr" minus "L00000000036$pb"
:info:build {standard input}:25122:symbol: "L__ZN5seqan26TranslateTableAsciiToDna5_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:23274:non-relocatable subtraction expression, "L__ZSt7nothrow$non_lazy_ptr" minus "L00000000035$pb"
:info:build {standard input}:23274:symbol: "L__ZSt7nothrow$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:23220:non-relocatable subtraction expression, "L__ZSt7nothrow$non_lazy_ptr" minus "L00000000035$pb"
:info:build {standard input}:23220:symbol: "L__ZSt7nothrow$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:20914:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000033$pb"
:info:build {standard input}:20914:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:20882:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000033$pb"
:info:build {standard input}:20882:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:20850:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000033$pb"
:info:build {standard input}:20850:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:16533:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000031$pb"
:info:build {standard input}:16533:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:16293:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000031$pb"
:info:build {standard input}:16293:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:15243:non-relocatable subtraction expression, "LC6" minus "L00000000030$pb"
:info:build {standard input}:15243:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:15233:non-relocatable subtraction expression, "LC18" minus "L00000000030$pb"
:info:build {standard input}:15233:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:15230:non-relocatable subtraction expression, "LC11" minus "L00000000030$pb"
:info:build {standard input}:15230:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:15088:non-relocatable subtraction expression, "LC23" minus "L00000000030$pb"
:info:build {standard input}:15088:symbol: "LC23" can't be undefined in a subtraction expression
:info:build {standard input}:15085:non-relocatable subtraction expression, "LC11" minus "L00000000030$pb"
:info:build {standard input}:15085:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:15084:non-relocatable subtraction expression, "LC22" minus "L00000000030$pb"
:info:build {standard input}:15084:symbol: "LC22" can't be undefined in a subtraction expression
:info:build {standard input}:15081:non-relocatable subtraction expression, "LC11" minus "L00000000030$pb"
:info:build {standard input}:15081:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:14919:non-relocatable subtraction expression, "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000029$pb"
:info:build {standard input}:14919:symbol: "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14862:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000029$pb"
:info:build {standard input}:14862:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14860:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000029$pb"
:info:build {standard input}:14860:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14694:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000028$pb"
:info:build {standard input}:14694:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14692:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000028$pb"
:info:build {standard input}:14692:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14483:non-relocatable subtraction expression, "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000027$pb"
:info:build {standard input}:14483:symbol: "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14429:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000027$pb"
:info:build {standard input}:14429:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14427:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000027$pb"
:info:build {standard input}:14427:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14253:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000026$pb"
:info:build {standard input}:14253:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:14251:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000026$pb"
:info:build {standard input}:14251:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:13637:non-relocatable subtraction expression, "L__ZSt7nothrow$non_lazy_ptr" minus "L00000000024$pb"
:info:build {standard input}:13637:symbol: "L__ZSt7nothrow$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:13430:non-relocatable subtraction expression, "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" minus "L00000000023$pb"
:info:build {standard input}:13430:symbol: "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:12296:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000022$pb"
:info:build {standard input}:12296:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:12293:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" minus "L00000000022$pb"
:info:build {standard input}:12293:symbol: "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:12246:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000022$pb"
:info:build {standard input}:12246:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:12243:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" minus "L00000000022$pb"
:info:build {standard input}:12243:symbol: "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:9513:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9513:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9505:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9505:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9398:non-relocatable subtraction expression, "LC6" minus "L00000000021$pb"
:info:build {standard input}:9398:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:9382:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9382:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9374:non-relocatable subtraction expression, "LC18" minus "L00000000021$pb"
:info:build {standard input}:9374:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:9371:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9371:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9273:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9273:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9206:non-relocatable subtraction expression, "LC23" minus "L00000000021$pb"
:info:build {standard input}:9206:symbol: "LC23" can't be undefined in a subtraction expression
:info:build {standard input}:9203:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9203:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:9202:non-relocatable subtraction expression, "LC22" minus "L00000000021$pb"
:info:build {standard input}:9202:symbol: "LC22" can't be undefined in a subtraction expression
:info:build {standard input}:9199:non-relocatable subtraction expression, "LC11" minus "L00000000021$pb"
:info:build {standard input}:9199:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:8933:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" minus "L00000000020$pb"
:info:build {standard input}:8933:symbol: "L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:6733:non-relocatable subtraction expression, "LC12" minus "L00000000019$pb"
:info:build {standard input}:6733:symbol: "LC12" can't be undefined in a subtraction expression
:info:build {standard input}:6724:non-relocatable subtraction expression, "LC21" minus "L00000000019$pb"
:info:build {standard input}:6724:symbol: "LC21" can't be undefined in a subtraction expression
:info:build {standard input}:6718:non-relocatable subtraction expression, "LC20" minus "L00000000019$pb"
:info:build {standard input}:6718:symbol: "LC20" can't be undefined in a subtraction expression
:info:build {standard input}:6716:non-relocatable subtraction expression, "LC19" minus "L00000000019$pb"
:info:build {standard input}:6716:symbol: "LC19" can't be undefined in a subtraction expression
:info:build {standard input}:6710:non-relocatable subtraction expression, "LC11" minus "L00000000019$pb"
:info:build {standard input}:6710:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:6700:non-relocatable subtraction expression, "LC6" minus "L00000000019$pb"
:info:build {standard input}:6700:symbol: "LC6" can't be undefined in a subtraction expression
:info:build {standard input}:6696:non-relocatable subtraction expression, "LC18" minus "L00000000019$pb"
:info:build {standard input}:6696:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:6693:non-relocatable subtraction expression, "LC11" minus "L00000000019$pb"
:info:build {standard input}:6693:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:5646:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000018$pb"
:info:build {standard input}:5646:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:5643:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000018$pb"
:info:build {standard input}:5643:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:4557:non-relocatable subtraction expression, "LC18" minus "L00000000017$pb"
:info:build {standard input}:4557:symbol: "LC18" can't be undefined in a subtraction expression
:info:build {standard input}:4550:non-relocatable subtraction expression, "LC11" minus "L00000000017$pb"
:info:build {standard input}:4550:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:3613:non-relocatable subtraction expression, "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" minus "L00000000016$pb"
:info:build {standard input}:3613:symbol: "L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:2717:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000015$pb"
:info:build {standard input}:2717:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:1477:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000014$pb"
:info:build {standard input}:1477:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:1474:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" minus "L00000000014$pb"
:info:build {standard input}:1474:symbol: "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:1387:non-relocatable subtraction expression, "L__ZSt4cerr$non_lazy_ptr" minus "L00000000013$pb"
:info:build {standard input}:1387:symbol: "L__ZSt4cerr$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:1281:non-relocatable subtraction expression, "LC13" minus "L00000000012$pb"
:info:build {standard input}:1281:symbol: "LC13" can't be undefined in a subtraction expression
:info:build {standard input}:1271:non-relocatable subtraction expression, "LC12" minus "L00000000012$pb"
:info:build {standard input}:1271:symbol: "LC12" can't be undefined in a subtraction expression
:info:build {standard input}:1260:non-relocatable subtraction expression, "LC11" minus "L00000000012$pb"
:info:build {standard input}:1260:symbol: "LC11" can't be undefined in a subtraction expression
:info:build {standard input}:1244:non-relocatable subtraction expression, "LC10" minus "L00000000012$pb"
:info:build {standard input}:1244:symbol: "LC10" can't be undefined in a subtraction expression
:info:build {standard input}:1237:non-relocatable subtraction expression, "LC9" minus "L00000000012$pb"
:info:build {standard input}:1237:symbol: "LC9" can't be undefined in a subtraction expression
:info:build {standard input}:1225:non-relocatable subtraction expression, "LC8" minus "L00000000012$pb"
:info:build {standard input}:1225:symbol: "LC8" can't be undefined in a subtraction expression
:info:build {standard input}:747:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000010$pb"
:info:build {standard input}:747:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:744:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" minus "L00000000010$pb"
:info:build {standard input}:744:symbol: "L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:722:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000009$pb"
:info:build {standard input}:722:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:701:non-relocatable subtraction expression, "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" minus "L00000000008$pb"
:info:build {standard input}:701:symbol: "L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:338:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000005$pb"
:info:build {standard input}:338:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:335:non-relocatable subtraction expression, "L__ZN5seqan26TranslateTableAsciiToDna5_IvE5VALUEE$non_lazy_ptr" minus "L00000000005$pb"
:info:build {standard input}:335:symbol: "L__ZN5seqan26TranslateTableAsciiToDna5_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:333:non-relocatable subtraction expression, "L__ZN5seqan35TranslateTableDna5ToDna5Complement_IvE5VALUEE$non_lazy_ptr" minus "L00000000005$pb"
:info:build {standard input}:333:symbol: "L__ZN5seqan35TranslateTableDna5ToDna5Complement_IvE5VALUEE$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:331:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000005$pb"
:info:build {standard input}:331:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:328:non-relocatable subtraction expression, "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000005$pb"
:info:build {standard input}:328:symbol: "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:68:non-relocatable subtraction expression, "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000003$pb"
:info:build {standard input}:68:symbol: "L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:44:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" minus "L00000000002$pb"
:info:build {standard input}:44:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:22:non-relocatable subtraction expression, "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" minus "L00000000001$pb"
:info:build {standard input}:22:symbol: "L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:613:non-relocatable subtraction expression, "L___dso_handle$non_lazy_ptr" minus "L00000000006$pb"
:info:build {standard input}:613:symbol: "L___dso_handle$non_lazy_ptr" can't be undefined in a subtraction expression
:info:build {standard input}:610:non-relocatable subtraction expression, "__ZStL8__ioinit" minus "L00000000006$pb"
:info:build {standard input}:610:symbol: "__ZStL8__ioinit" can't be undefined in a subtraction expression
:info:build {standard input}:unknown:Undefined local symbol L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_5Dna5_EEERKNS0_IhNS_6Dna5Q_EEEE5table$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZZN5seqan6assignERNS_10SimpleTypeIhNS_6Dna5Q_EEERKNS0_IhNS_5Dna5_EEEE5table$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZZN5seqan15getQualityValueERKNS_10SimpleTypeIhNS_6Dna5Q_EEEE5table$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZSt4cerr$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZN5seqan35TranslateTableDna5ToDna5Complement_IvE5VALUEE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZN5seqan26TranslateTableAsciiToDna5_IvE5VALUEE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L___dso_handle$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZTVN5seqan4FileINS_4SyncIvEEEE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol L__ZTVN5seqan4FileINS_5AsyncIvEEEE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol LC6
:info:build {standard input}:unknown:Undefined local symbol LC7
:info:build {standard input}:unknown:Undefined local symbol LC8
:info:build {standard input}:unknown:Undefined local symbol LC9
:info:build {standard input}:unknown:Undefined local symbol LC10
:info:build {standard input}:unknown:Undefined local symbol LC11
:info:build {standard input}:unknown:Undefined local symbol LC12
:info:build {standard input}:unknown:Undefined local symbol LC13
:info:build {standard input}:unknown:Undefined local symbol L__ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol LC18
:info:build {standard input}:unknown:Undefined local symbol LC19
:info:build {standard input}:unknown:Undefined local symbol LC20
:info:build {standard input}:unknown:Undefined local symbol LC21
:info:build {standard input}:unknown:Undefined local symbol L__ZN5seqan26TranslateTableDna5ToAscii_IvE5VALUEE$non_lazy_ptr
:info:build {standard input}:unknown:Undefined local symbol LC22
:info:build {standard input}:unknown:Undefined local symbol LC23
:info:build {standard input}:unknown:Undefined local symbol L__ZSt7nothrow$non_lazy_ptr
:info:build make[2]: *** [apps/CMakeFiles/mason.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/mason/mason.cpp.o] Error 1
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build make[1]: *** [apps/CMakeFiles/mason.dir/all] Error 2
:info:build make[1]: *** Waiting for unfinished jobs....
:info:build Linking CXX executable micro_razers
:info:build cd /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/apps && /i386-10.6-mp/bin/cmake -E cmake_link_script CMakeFiles/micro_razers.dir/link.txt --verbose=1
:info:build /usr/bin/g++-4.2   -pipe -O2 -arch i386  -W -Wall -Wno-long-long -pedantic -Wno-variadic-macros -fopenmp -DSEQAN_HAS_SAMTOOLS=1 -DSEQAN_ENABLE_TESTING=0 -O3 -DNDEBUG -DSEQAN_ENABLE_DEBUG=0 -mmacosx-version-min=10.6 -Wl,-search_paths_first -Wl,-headerpad_max_install_names  -L/i386-10.6-mp/lib -arch i386 CMakeFiles/micro_razers.dir/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/apps/micro_razers/micro_razers.cpp.o  -o micro_razers  -L/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/lib -lz 
:info:build make[2]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build /i386-10.6-mp/bin/cmake -E cmake_progress_report /i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake/CMakeFiles 
:info:build [ 16%] Built target micro_razers
:info:build make[1]: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build make: *** [all] Error 2
:info:build make: Leaving directory `/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake'
:info:build shell command " cd "/i386-10.6-mp/var/macports/build/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/work/seqan-1.3.1/cmake" && /usr/bin/make -j2 -w all " returned error 2
:error:build Target org.macports.build returned: shell command failed (see log for details)
:debug:build Backtrace: shell command failed (see log for details)
    while executing
"command_exec build"
    (procedure "portbuild::build_main" line 8)
    invoked from within
"$procedure $targetname"
:info:build Warning: the following items did not execute (for seqan): org.macports.activate org.macports.build org.macports.destroot org.macports.install
:notice:build Log for seqan is at: /i386-10.6-mp/var/macports/logs/_Users_rschmidt_macports_dports-clean_science_seqan/seqan/main.log