Ticket #36474: main.log

File main.log, 557.7 KB (added by macports.org@…, 12 years ago)

Trace of 'port install arb' after patching Makefile to do -O3

Line 
1version:1
2:debug:main epoch: in tree: 0 installed: 0
3:debug:main imake 1.0.5_1 exists in the ports tree
4:debug:main imake 1.0.5_1  is the latest installed
5:debug:main imake 1.0.5_1  is active
6:debug:main Merging existing variants '' into variants
7:debug:main new fully merged portvariants:
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/imake
9:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
10:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
11:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
12:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
13:debug:main adding the default universal variant
14:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
15:debug:main No need to upgrade! imake 1.0.5_1 >= imake 1.0.5_1
16:debug:main epoch: in tree: 0 installed: 0
17:debug:main xorg-cf-files 1.0.4_2 exists in the ports tree
18:debug:main xorg-cf-files 1.0.4_2  is the latest installed
19:debug:main xorg-cf-files 1.0.4_2  is active
20:debug:main Merging existing variants '' into variants
21:debug:main new fully merged portvariants:
22:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-cf-files
23:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
24:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
25:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
26:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
27:debug:main only one arch supported, so not adding the default universal variant
28:debug:main No need to upgrade! xorg-cf-files 1.0.4_2 >= xorg-cf-files 1.0.4_2
29:debug:main epoch: in tree: 0 installed: 0
30:debug:main perl5 5.12.4_0 exists in the ports tree
31:debug:main perl5 5.12.4_0 +perl5_12 is the latest installed
32:debug:main perl5 5.12.4_0 +perl5_12 is active
33:debug:main Merging existing variants '+perl5_12' into variants
34:debug:main new fully merged portvariants: perl5_12 +
35:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
36:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
37:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
38:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
39:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
40:debug:main universal_variant is false, so not adding the default universal variant
41:debug:main Executing variant perl5_12 provides perl5_12
42:debug:main No need to upgrade! perl5 5.12.4_0 >= perl5 5.12.4_0
43:debug:main epoch: in tree: 0 installed: 0
44:debug:main perl5.12 5.12.4_1 exists in the ports tree
45:debug:main perl5.12 5.12.4_1  is the latest installed
46:debug:main perl5.12 5.12.4_1  is active
47:debug:main Merging existing variants '' into variants
48:debug:main new fully merged portvariants:
49:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5.12
50:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
51:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
52:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
53:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
54:debug:main adding the default universal variant
55:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
56:debug:main No need to upgrade! perl5.12 5.12.4_1 >= perl5.12 5.12.4_1
57:debug:main epoch: in tree: 0 installed: 0
58:debug:main gdbm 1.10_2 exists in the ports tree
59:debug:main gdbm 1.10_2  is the latest installed
60:debug:main gdbm 1.10_2  is active
61:debug:main Merging existing variants '' into variants
62:debug:main new fully merged portvariants:
63:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm
64:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
65:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
66:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
67:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
68:debug:main adding the default universal variant
69:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
70:debug:main No need to upgrade! gdbm 1.10_2 >= gdbm 1.10_2
71:debug:main epoch: in tree: 0 installed: 0
72:debug:main gettext 0.18.1.1_2 exists in the ports tree
73:debug:main gettext 0.18.1.1_2  is the latest installed
74:debug:main gettext 0.18.1.1_2  is active
75:debug:main Merging existing variants '' into variants
76:debug:main new fully merged portvariants:
77:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext
78:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
79:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
80:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
81:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
82:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
83:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
84:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/archcheck-1.0.tcl
85:debug:main universal variant already exists, so not adding the default one
86:debug:main No need to upgrade! gettext 0.18.1.1_2 >= gettext 0.18.1.1_2
87:debug:main epoch: in tree: 0 installed: 0
88:debug:main libiconv 1.14_0 exists in the ports tree
89:debug:main libiconv 1.14_0  is the latest installed
90:debug:main libiconv 1.14_0  is active
91:debug:main Merging existing variants '' into variants
92:debug:main new fully merged portvariants:
93:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv
94:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
95:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
96:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
97:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
98:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
99:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
100:debug:main universal variant already exists, so not adding the default one
101:debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
102:debug:main epoch: in tree: 0 installed: 0
103:debug:main ncurses 5.9_1 exists in the ports tree
104:debug:main ncurses 5.9_1  is the latest installed
105:debug:main ncurses 5.9_1  is active
106:debug:main Merging existing variants '' into variants
107:debug:main new fully merged portvariants:
108:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses
109:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
110:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
111:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
112:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
113:debug:main adding the default universal variant
114:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
115:debug:main No need to upgrade! ncurses 5.9_1 >= ncurses 5.9_1
116:debug:main epoch: in tree: 0 installed: 0
117:debug:main expat 2.1.0_0 exists in the ports tree
118:debug:main expat 2.1.0_0  is the latest installed
119:debug:main expat 2.1.0_0  is active
120:debug:main Merging existing variants '' into variants
121:debug:main new fully merged portvariants:
122:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat
123:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
124:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
125:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
126:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
127:debug:main adding the default universal variant
128:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
129:debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0
130:debug:main epoch: in tree: 0 installed: 0
131:debug:main makedepend 1.0.4_0 exists in the ports tree
132:debug:main makedepend 1.0.4_0  is the latest installed
133:debug:main makedepend 1.0.4_0  is active
134:debug:main Merging existing variants '' into variants
135:debug:main new fully merged portvariants:
136:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/makedepend
137:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
138:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
139:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
140:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
141:debug:main adding the default universal variant
142:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
143:debug:main No need to upgrade! makedepend 1.0.4_0 >= makedepend 1.0.4_0
144:debug:main epoch: in tree: 0 installed: 0
145:debug:main openmotif 2.3.3_1 exists in the ports tree
146:debug:main openmotif 2.3.3_1  is the latest installed
147:debug:main openmotif 2.3.3_1  is active
148:debug:main Merging existing variants '' into variants
149:debug:main new fully merged portvariants:
150:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/openmotif
151:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
152:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
153:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
154:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
155:debug:main adding the default universal variant
156:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
157:debug:main No need to upgrade! openmotif 2.3.3_1 >= openmotif 2.3.3_1
158:debug:main epoch: in tree: 0 installed: 0
159:debug:main jpeg 8d_0 exists in the ports tree
160:debug:main jpeg 8d_0  is the latest installed
161:debug:main jpeg 8d_0  is active
162:debug:main Merging existing variants '' into variants
163:debug:main new fully merged portvariants:
164:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jpeg
165:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
166:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
167:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
168:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
169:debug:main adding the default universal variant
170:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
171:debug:main No need to upgrade! jpeg 8d_0 >= jpeg 8d_0
172:debug:main epoch: in tree: 0 installed: 0
173:debug:main libpng 1.5.12_0 exists in the ports tree
174:debug:main libpng 1.5.12_0  is the latest installed
175:debug:main libpng 1.5.12_0  is active
176:debug:main Merging existing variants '' into variants
177:debug:main new fully merged portvariants:
178:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/libpng
179:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
180:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
181:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
182:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
183:debug:main adding the default universal variant
184:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
185:debug:main No need to upgrade! libpng 1.5.12_0 >= libpng 1.5.12_0
186:debug:main epoch: in tree: 0 installed: 0
187:debug:main zlib 1.2.7_0 exists in the ports tree
188:debug:main zlib 1.2.7_0  is the latest installed
189:debug:main zlib 1.2.7_0  is active
190:debug:main Merging existing variants '' into variants
191:debug:main new fully merged portvariants:
192:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib
193:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
194:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
195:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
196:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
197:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
198:debug:main adding the default universal variant
199:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
200:debug:main No need to upgrade! zlib 1.2.7_0 >= zlib 1.2.7_0
201:debug:main epoch: in tree: 0 installed: 0
202:debug:main xorg-libsm 1.2.1_0 exists in the ports tree
203:debug:main xorg-libsm 1.2.1_0  is the latest installed
204:debug:main xorg-libsm 1.2.1_0  is active
205:debug:main Merging existing variants '' into variants
206:debug:main new fully merged portvariants:
207:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libsm
208:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
209:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
210:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
211:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
212:debug:main adding the default universal variant
213:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
214:debug:main No need to upgrade! xorg-libsm 1.2.1_0 >= xorg-libsm 1.2.1_0
215:debug:main epoch: in tree: 0 installed: 0
216:debug:main xorg-libice 1.0.8_0 exists in the ports tree
217:debug:main xorg-libice 1.0.8_0  is the latest installed
218:debug:main xorg-libice 1.0.8_0  is active
219:debug:main Merging existing variants '' into variants
220:debug:main new fully merged portvariants:
221:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libice
222:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
223:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
224:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
225:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
226:debug:main adding the default universal variant
227:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
228:debug:main No need to upgrade! xorg-libice 1.0.8_0 >= xorg-libice 1.0.8_0
229:debug:main epoch: in tree: 0 installed: 0
230:debug:main xorg-xproto 7.0.23_0 exists in the ports tree
231:debug:main xorg-xproto 7.0.23_0  is the latest installed
232:debug:main xorg-xproto 7.0.23_0  is active
233:debug:main Merging existing variants '' into variants
234:debug:main new fully merged portvariants:
235:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xproto
236:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
237:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
238:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
239:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
240:debug:main only one arch supported, so not adding the default universal variant
241:debug:main No need to upgrade! xorg-xproto 7.0.23_0 >= xorg-xproto 7.0.23_0
242:debug:main epoch: in tree: 0 installed: 0
243:debug:main xorg-libXext 1.3.1_0 exists in the ports tree
244:debug:main xorg-libXext 1.3.1_0  is the latest installed
245:debug:main xorg-libXext 1.3.1_0  is active
246:debug:main Merging existing variants '' into variants
247:debug:main new fully merged portvariants:
248:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXext
249:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
250:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
251:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
252:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
253:debug:main adding the default universal variant
254:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
255:debug:main No need to upgrade! xorg-libXext 1.3.1_0 >= xorg-libXext 1.3.1_0
256:debug:main epoch: in tree: 0 installed: 0
257:debug:main xorg-libX11 1.5.0_0 exists in the ports tree
258:debug:main xorg-libX11 1.5.0_0  is the latest installed
259:debug:main xorg-libX11 1.5.0_0  is active
260:debug:main Merging existing variants '' into variants
261:debug:main new fully merged portvariants:
262:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libX11
263:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
264:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
265:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
266:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
267:debug:main adding the default universal variant
268:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
269:debug:main No need to upgrade! xorg-libX11 1.5.0_0 >= xorg-libX11 1.5.0_0
270:debug:main epoch: in tree: 0 installed: 0
271:debug:main xorg-libXdmcp 1.1.1_0 exists in the ports tree
272:debug:main xorg-libXdmcp 1.1.1_0  is the latest installed
273:debug:main xorg-libXdmcp 1.1.1_0  is active
274:debug:main Merging existing variants '' into variants
275:debug:main new fully merged portvariants:
276:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXdmcp
277:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
278:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
279:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
280:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
281:debug:main adding the default universal variant
282:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
283:debug:main No need to upgrade! xorg-libXdmcp 1.1.1_0 >= xorg-libXdmcp 1.1.1_0
284:debug:main epoch: in tree: 0 installed: 0
285:debug:main xorg-libXau 1.0.7_0 exists in the ports tree
286:debug:main xorg-libXau 1.0.7_0  is the latest installed
287:debug:main xorg-libXau 1.0.7_0  is active
288:debug:main Merging existing variants '' into variants
289:debug:main new fully merged portvariants:
290:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXau
291:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
292:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
293:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
294:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
295:debug:main adding the default universal variant
296:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
297:debug:main No need to upgrade! xorg-libXau 1.0.7_0 >= xorg-libXau 1.0.7_0
298:debug:main epoch: in tree: 0 installed: 0
299:debug:main xorg-libxcb 1.8.1_2 exists in the ports tree
300:debug:main xorg-libxcb 1.8.1_2 +python27 is the latest installed
301:debug:main xorg-libxcb 1.8.1_2 +python27 is active
302:debug:main Merging existing variants '+python27' into variants
303:debug:main new fully merged portvariants: python27 +
304:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libxcb
305:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
306:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
307:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
308:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
309:debug:main adding the default universal variant
310:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
311:debug:main Executing variant python27 provides python27
312:debug:main No need to upgrade! xorg-libxcb 1.8.1_2 >= xorg-libxcb 1.8.1_2
313:debug:main epoch: in tree: 0 installed: 0
314:debug:main xorg-xcb-proto 1.7.1_0 exists in the ports tree
315:debug:main xorg-xcb-proto 1.7.1_0 +python27 is the latest installed
316:debug:main xorg-xcb-proto 1.7.1_0 +python27 is active
317:debug:main Merging existing variants '+python27' into variants
318:debug:main new fully merged portvariants: python27 +
319:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xcb-proto
320:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
321:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
322:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
323:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
324:debug:main only one arch supported, so not adding the default universal variant
325:debug:main Executing variant python27 provides python27
326:debug:main No need to upgrade! xorg-xcb-proto 1.7.1_0 >= xorg-xcb-proto 1.7.1_0
327:debug:main epoch: in tree: 0 installed: 0
328:debug:main libxml2 2.8.0_0 exists in the ports tree
329:debug:main libxml2 2.8.0_0  is the latest installed
330:debug:main libxml2 2.8.0_0  is active
331:debug:main Merging existing variants '' into variants
332:debug:main new fully merged portvariants:
333:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxml2
334:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
335:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
336:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
337:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
338:debug:main adding the default universal variant
339:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
340:debug:main No need to upgrade! libxml2 2.8.0_0 >= libxml2 2.8.0_0
341:debug:main epoch: in tree: 0 installed: 0
342:debug:main xz 5.0.4_0 exists in the ports tree
343:debug:main xz 5.0.4_0  is the latest installed
344:debug:main xz 5.0.4_0  is active
345:debug:main Merging existing variants '' into variants
346:debug:main new fully merged portvariants:
347:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/xz
348:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
349:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
350:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
351:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
352:debug:main adding the default universal variant
353:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
354:debug:main No need to upgrade! xz 5.0.4_0 >= xz 5.0.4_0
355:debug:main epoch: in tree: 2 installed: 2
356:debug:main python27 2.7.3_0 exists in the ports tree
357:debug:main python27 2.7.3_0  is the latest installed
358:debug:main python27 2.7.3_0  is active
359:debug:main Merging existing variants '' into variants
360:debug:main new fully merged portvariants:
361:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27
362:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
363:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
364:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
365:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
366:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
367:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
368:debug:main universal variant already exists, so not adding the default one
369:debug:main No need to upgrade! python27 2.7.3_0 >= python27 2.7.3_0
370:debug:main epoch: in tree: 1 installed: 1
371:debug:main openssl 1.0.1c_0 exists in the ports tree
372:debug:main openssl 1.0.1c_0  is the latest installed
373:debug:main openssl 1.0.1c_0  is active
374:debug:main Merging existing variants '' into variants
375:debug:main new fully merged portvariants:
376:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl
377:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
378:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
379:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
380:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
381:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
382:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
383:debug:main universal variant already exists, so not adding the default one
384:debug:main No need to upgrade! openssl 1.0.1c_0 >= openssl 1.0.1c_0
385:debug:main epoch: in tree: 0 installed: 0
386:debug:main sqlite3 3.7.14_1 exists in the ports tree
387:debug:main sqlite3 3.7.14_1  is the latest installed
388:debug:main sqlite3 3.7.14_1  is active
389:debug:main Merging existing variants '' into variants
390:debug:main new fully merged portvariants:
391:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3
392:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
393:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
394:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
395:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
396:debug:main adding the default universal variant
397:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
398:debug:main No need to upgrade! sqlite3 3.7.14_1 >= sqlite3 3.7.14_1
399:debug:main epoch: in tree: 20090923 installed: 20090923
400:debug:main libedit 20120601-3.0_0 exists in the ports tree
401:debug:main libedit 20120601-3.0_0  is the latest installed
402:debug:main libedit 20120601-3.0_0  is active
403:debug:main Merging existing variants '' into variants
404:debug:main new fully merged portvariants:
405:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit
406:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
407:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
408:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
409:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
410:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
411:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
412:debug:main universal variant already exists, so not adding the default one
413:debug:main No need to upgrade! libedit 20120601-3.0_0 >= libedit 20120601-3.0_0
414:debug:main epoch: in tree: 0 installed: 0
415:debug:main db46 4.6.21_6 exists in the ports tree
416:debug:main db46 4.6.21_6 +java is the latest installed
417:debug:main db46 4.6.21_6 +java is active
418:debug:main Merging existing variants '+java' into variants
419:debug:main new fully merged portvariants: java +
420:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db46
421:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
422:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
423:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
424:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
425:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
426:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
427:debug:main universal variant already exists, so not adding the default one
428:debug:main Executing variant java provides java
429:debug:main No need to upgrade! db46 4.6.21_6 >= db46 4.6.21_6
430:debug:main epoch: in tree: 0 installed: 0
431:debug:main bzip2 1.0.6_0 exists in the ports tree
432:debug:main bzip2 1.0.6_0  is the latest installed
433:debug:main bzip2 1.0.6_0  is active
434:debug:main Merging existing variants '' into variants
435:debug:main new fully merged portvariants:
436:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2
437:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
438:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
439:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
440:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
441:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
442:debug:main universal variant already exists, so not adding the default one
443:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
444:debug:main epoch: in tree: 0 installed: 0
445:debug:main python_select 0.3_1 exists in the ports tree
446:debug:main python_select 0.3_1  is the latest installed
447:debug:main python_select 0.3_1  is active
448:debug:main Merging existing variants '' into variants
449:debug:main new fully merged portvariants:
450:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select
451:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
452:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
453:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
454:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
455:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
456:debug:main universal_variant is false, so not adding the default universal variant
457:debug:main No need to upgrade! python_select 0.3_1 >= python_select 0.3_1
458:debug:main epoch: in tree: 0 installed: 0
459:debug:main xorg-libpthread-stubs 0.3_0 exists in the ports tree
460:debug:main xorg-libpthread-stubs 0.3_0  is the latest installed
461:debug:main xorg-libpthread-stubs 0.3_0  is active
462:debug:main Merging existing variants '' into variants
463:debug:main new fully merged portvariants:
464:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libpthread-stubs
465:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
466:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
467:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
468:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
469:debug:main only one arch supported, so not adding the default universal variant
470:debug:main No need to upgrade! xorg-libpthread-stubs 0.3_0 >= xorg-libpthread-stubs 0.3_0
471:debug:main epoch: in tree: 0 installed: 0
472:debug:main xorg-kbproto 1.0.6_0 exists in the ports tree
473:debug:main xorg-kbproto 1.0.6_0  is the latest installed
474:debug:main xorg-kbproto 1.0.6_0  is active
475:debug:main Merging existing variants '' into variants
476:debug:main new fully merged portvariants:
477:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-kbproto
478:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
479:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
480:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
481:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
482:debug:main only one arch supported, so not adding the default universal variant
483:debug:main No need to upgrade! xorg-kbproto 1.0.6_0 >= xorg-kbproto 1.0.6_0
484:debug:main epoch: in tree: 0 installed: 0
485:debug:main xorg-xextproto 7.2.1_0 exists in the ports tree
486:debug:main xorg-xextproto 7.2.1_0  is the latest installed
487:debug:main xorg-xextproto 7.2.1_0  is active
488:debug:main Merging existing variants '' into variants
489:debug:main new fully merged portvariants:
490:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xextproto
491:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
492:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
493:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
494:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
495:debug:main only one arch supported, so not adding the default universal variant
496:debug:main No need to upgrade! xorg-xextproto 7.2.1_0 >= xorg-xextproto 7.2.1_0
497:debug:main epoch: in tree: 0 installed: 0
498:debug:main Xft2 2.3.1_0 exists in the ports tree
499:debug:main Xft2 2.3.1_0  is the latest installed
500:debug:main Xft2 2.3.1_0  is active
501:debug:main Merging existing variants '' into variants
502:debug:main new fully merged portvariants:
503:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/Xft2
504:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
505:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
506:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
507:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
508:debug:main adding the default universal variant
509:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
510:debug:main No need to upgrade! Xft2 2.3.1_0 >= Xft2 2.3.1_0
511:debug:main epoch: in tree: 0 installed: 0
512:debug:main xrender 0.9.7_0 exists in the ports tree
513:debug:main xrender 0.9.7_0  is the latest installed
514:debug:main xrender 0.9.7_0  is active
515:debug:main Merging existing variants '' into variants
516:debug:main new fully merged portvariants:
517:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xrender
518:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
519:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
520:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
521:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
522:debug:main adding the default universal variant
523:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
524:debug:main No need to upgrade! xrender 0.9.7_0 >= xrender 0.9.7_0
525:debug:main epoch: in tree: 0 installed: 0
526:debug:main xorg-renderproto 0.11.1_0 exists in the ports tree
527:debug:main xorg-renderproto 0.11.1_0  is the latest installed
528:debug:main xorg-renderproto 0.11.1_0  is active
529:debug:main Merging existing variants '' into variants
530:debug:main new fully merged portvariants:
531:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-renderproto
532:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
533:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
534:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
535:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
536:debug:main only one arch supported, so not adding the default universal variant
537:debug:main No need to upgrade! xorg-renderproto 0.11.1_0 >= xorg-renderproto 0.11.1_0
538:debug:main epoch: in tree: 0 installed: 0
539:debug:main freetype 2.4.10_0 exists in the ports tree
540:debug:main freetype 2.4.10_0  is the latest installed
541:debug:main freetype 2.4.10_0  is active
542:debug:main Merging existing variants '' into variants
543:debug:main new fully merged portvariants:
544:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/freetype
545:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
546:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
547:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
548:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
549:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
550:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
551:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/archcheck-1.0.tcl
552:debug:main universal variant already exists, so not adding the default one
553:debug:main No need to upgrade! freetype 2.4.10_0 >= freetype 2.4.10_0
554:debug:main epoch: in tree: 0 installed: 0
555:debug:main fontconfig 2.9.0_1 exists in the ports tree
556:debug:main fontconfig 2.9.0_1  is the latest installed
557:debug:main fontconfig 2.9.0_1  is active
558:debug:main Merging existing variants '' into variants
559:debug:main new fully merged portvariants:
560:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/fontconfig
561:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
562:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
563:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
564:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
565:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
566:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
567:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/archcheck-1.0.tcl
568:debug:main universal variant already exists, so not adding the default one
569:debug:main No need to upgrade! fontconfig 2.9.0_1 >= fontconfig 2.9.0_1
570:debug:main epoch: in tree: 0 installed: 0
571:debug:main xorg-libXmu 1.1.1_0 exists in the ports tree
572:debug:main xorg-libXmu 1.1.1_0  is the latest installed
573:debug:main xorg-libXmu 1.1.1_0  is active
574:debug:main Merging existing variants '' into variants
575:debug:main new fully merged portvariants:
576:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXmu
577:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
578:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
579:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
580:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
581:debug:main adding the default universal variant
582:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
583:debug:main No need to upgrade! xorg-libXmu 1.1.1_0 >= xorg-libXmu 1.1.1_0
584:debug:main epoch: in tree: 0 installed: 0
585:debug:main xorg-libXt 1.1.3_0 exists in the ports tree
586:debug:main xorg-libXt 1.1.3_0  is the latest installed
587:debug:main xorg-libXt 1.1.3_0  is active
588:debug:main Merging existing variants '' into variants
589:debug:main new fully merged portvariants:
590:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXt
591:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
592:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
593:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
594:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
595:debug:main adding the default universal variant
596:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
597:debug:main No need to upgrade! xorg-libXt 1.1.3_0 >= xorg-libXt 1.1.3_0
598:debug:main epoch: in tree: 0 installed: 0
599:debug:main xorg-libXp 1.0.1_0 exists in the ports tree
600:debug:main xorg-libXp 1.0.1_0  is the latest installed
601:debug:main xorg-libXp 1.0.1_0  is active
602:debug:main Merging existing variants '' into variants
603:debug:main new fully merged portvariants:
604:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXp
605:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
606:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
607:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
608:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
609:debug:main adding the default universal variant
610:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
611:debug:main No need to upgrade! xorg-libXp 1.0.1_0 >= xorg-libXp 1.0.1_0
612:debug:main epoch: in tree: 0 installed: 0
613:debug:main xorg-printproto 1.0.5_0 exists in the ports tree
614:debug:main xorg-printproto 1.0.5_0  is the latest installed
615:debug:main xorg-printproto 1.0.5_0  is active
616:debug:main Merging existing variants '' into variants
617:debug:main new fully merged portvariants:
618:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-printproto
619:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
620:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
621:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
622:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
623:debug:main only one arch supported, so not adding the default universal variant
624:debug:main No need to upgrade! xorg-printproto 1.0.5_0 >= xorg-printproto 1.0.5_0
625:debug:main epoch: in tree: 0 installed: 0
626:debug:main lynx 2.8.7rel.1_1 exists in the ports tree
627:debug:main lynx 2.8.7rel.1_1 +ssl is the latest installed
628:debug:main lynx 2.8.7rel.1_1 +ssl is active
629:debug:main Merging existing variants '+ssl' into variants
630:debug:main new fully merged portvariants: ssl +
631:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/www/lynx
632:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
633:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
634:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
635:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
636:debug:main adding the default universal variant
637:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
638:debug:main Executing variant ssl provides ssl
639:debug:main No need to upgrade! lynx 2.8.7rel.1_1 >= lynx 2.8.7rel.1_1
640:debug:main epoch: in tree: 0 installed: 0
641:debug:main gsed 4.2.1_2 exists in the ports tree
642:debug:main gsed 4.2.1_2  is the latest installed
643:debug:main gsed 4.2.1_2  is active
644:debug:main Merging existing variants '' into variants
645:debug:main new fully merged portvariants:
646:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/gsed
647:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
648:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
649:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
650:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
651:debug:main adding the default universal variant
652:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
653:debug:main No need to upgrade! gsed 4.2.1_2 >= gsed 4.2.1_2
654:debug:main epoch: in tree: 0 installed: 0
655:debug:main sablotron 1.0.3_1 exists in the ports tree
656:debug:main sablotron 1.0.3_1  is the latest installed
657:debug:main sablotron 1.0.3_1  is active
658:debug:main Merging existing variants '' into variants
659:debug:main new fully merged portvariants:
660:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/sablotron
661:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
662:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
663:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
664:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
665:debug:main adding the default universal variant
666:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
667:debug:main No need to upgrade! sablotron 1.0.3_1 >= sablotron 1.0.3_1
668:debug:main epoch: in tree: 1 installed: 1
669:debug:main spidermonkey 1.7.0_5 exists in the ports tree
670:debug:main spidermonkey 1.7.0_5  is the latest installed
671:debug:main spidermonkey 1.7.0_5  is active
672:debug:main Merging existing variants '' into variants
673:debug:main new fully merged portvariants:
674:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/spidermonkey
675:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
676:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
677:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
678:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
679:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
680:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
681:debug:main universal variant already exists, so not adding the default one
682:debug:main No need to upgrade! spidermonkey 1.7.0_5 >= spidermonkey 1.7.0_5
683:debug:main epoch: in tree: 0 installed: 0
684:debug:main nspr 4.8.9_0 exists in the ports tree
685:debug:main nspr 4.8.9_0  is the latest installed
686:debug:main nspr 4.8.9_0  is active
687:debug:main Merging existing variants '' into variants
688:debug:main new fully merged portvariants:
689:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/nspr
690:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
691:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
692:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
693:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
694:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
695:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
696:debug:main universal variant already exists, so not adding the default one
697:debug:main No need to upgrade! nspr 4.8.9_0 >= nspr 4.8.9_0
698:debug:main epoch: in tree: 0 installed: 0
699:debug:main glw 20120116_1 exists in the ports tree
700:debug:main glw 20120116_1  is the latest installed
701:debug:main glw 20120116_1  is active
702:debug:main Merging existing variants '' into variants
703:debug:main new fully merged portvariants:
704:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/glw
705:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
706:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
707:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
708:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
709:debug:main adding the default universal variant
710:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
711:debug:main No need to upgrade! glw 20120116_1 >= glw 20120116_1
712:debug:main epoch: in tree: 1 installed: 1
713:debug:main mesa 8.0.4_1 exists in the ports tree
714:debug:main mesa 8.0.4_1 +python27 is the latest installed
715:debug:main mesa 8.0.4_1 +python27 is active
716:debug:main Merging existing variants '+python27' into variants
717:debug:main new fully merged portvariants: python27 +
718:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/mesa
719:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
720:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
721:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
722:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
723:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
724:debug:main universal variant already exists, so not adding the default one
725:debug:main Executing variant python27 provides python27
726:debug:main No need to upgrade! mesa 8.0.4_1 >= mesa 8.0.4_1
727:debug:main epoch: in tree: 0 installed: 0
728:debug:main xorg-glproto 1.4.16_0 exists in the ports tree
729:debug:main xorg-glproto 1.4.16_0  is the latest installed
730:debug:main xorg-glproto 1.4.16_0  is active
731:debug:main Merging existing variants '' into variants
732:debug:main new fully merged portvariants:
733:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-glproto
734:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
735:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
736:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
737:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
738:debug:main only one arch supported, so not adding the default universal variant
739:debug:main No need to upgrade! xorg-glproto 1.4.16_0 >= xorg-glproto 1.4.16_0
740:debug:main epoch: in tree: 0 installed: 0
741:debug:main xorg-dri2proto 2.8_0 exists in the ports tree
742:debug:main xorg-dri2proto 2.8_0  is the latest installed
743:debug:main xorg-dri2proto 2.8_0  is active
744:debug:main Merging existing variants '' into variants
745:debug:main new fully merged portvariants:
746:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-dri2proto
747:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
748:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
749:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
750:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
751:debug:main only one arch supported, so not adding the default universal variant
752:debug:main No need to upgrade! xorg-dri2proto 2.8_0 >= xorg-dri2proto 2.8_0
753:debug:main epoch: in tree: 0 installed: 0
754:debug:main xorg-libXfixes 5.0_0 exists in the ports tree
755:debug:main xorg-libXfixes 5.0_0  is the latest installed
756:debug:main xorg-libXfixes 5.0_0  is active
757:debug:main Merging existing variants '' into variants
758:debug:main new fully merged portvariants:
759:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXfixes
760:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
761:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
762:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
763:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
764:debug:main adding the default universal variant
765:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
766:debug:main No need to upgrade! xorg-libXfixes 5.0_0 >= xorg-libXfixes 5.0_0
767:debug:main epoch: in tree: 0 installed: 0
768:debug:main xorg-fixesproto 5.0_0 exists in the ports tree
769:debug:main xorg-fixesproto 5.0_0  is the latest installed
770:debug:main xorg-fixesproto 5.0_0  is active
771:debug:main Merging existing variants '' into variants
772:debug:main new fully merged portvariants:
773:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-fixesproto
774:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
775:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
776:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
777:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
778:debug:main only one arch supported, so not adding the default universal variant
779:debug:main No need to upgrade! xorg-fixesproto 5.0_0 >= xorg-fixesproto 5.0_0
780:debug:main epoch: in tree: 0 installed: 0
781:debug:main xorg-libXi 1.6.1_0 exists in the ports tree
782:debug:main xorg-libXi 1.6.1_0  is the latest installed
783:debug:main xorg-libXi 1.6.1_0  is active
784:debug:main Merging existing variants '' into variants
785:debug:main new fully merged portvariants:
786:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXi
787:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
788:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
789:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
790:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
791:debug:main adding the default universal variant
792:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
793:debug:main No need to upgrade! xorg-libXi 1.6.1_0 >= xorg-libXi 1.6.1_0
794:debug:main epoch: in tree: 0 installed: 0
795:debug:main xorg-inputproto 2.2_0 exists in the ports tree
796:debug:main xorg-inputproto 2.2_0  is the latest installed
797:debug:main xorg-inputproto 2.2_0  is active
798:debug:main Merging existing variants '' into variants
799:debug:main new fully merged portvariants:
800:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-inputproto
801:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
802:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
803:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
804:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
805:debug:main only one arch supported, so not adding the default universal variant
806:debug:main No need to upgrade! xorg-inputproto 2.2_0 >= xorg-inputproto 2.2_0
807:debug:main epoch: in tree: 0 installed: 0
808:debug:main glew 1.9.0_0 exists in the ports tree
809:debug:main glew 1.9.0_0  is the latest installed
810:debug:main glew 1.9.0_0  is active
811:debug:main Merging existing variants '' into variants
812:debug:main new fully merged portvariants:
813:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/glew
814:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
815:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
816:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
817:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
818:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
819:debug:main universal variant already exists, so not adding the default one
820:debug:main No need to upgrade! glew 1.9.0_0 >= glew 1.9.0_0
821:debug:main epoch: in tree: 0 installed: 0
822:debug:main xfig 3.2.5b_6 exists in the ports tree
823:debug:main xfig 3.2.5b_6  is the latest installed
824:debug:main xfig 3.2.5b_6  is active
825:debug:main Merging existing variants '' into variants
826:debug:main new fully merged portvariants:
827:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/xfig
828:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
829:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
830:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
831:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
832:debug:main using xmkmf, so not adding the default universal variant
833:debug:main No need to upgrade! xfig 3.2.5b_6 >= xfig 3.2.5b_6
834:debug:main epoch: in tree: 0 installed: 0
835:debug:main Xaw3d 1.6.2_0 exists in the ports tree
836:debug:main Xaw3d 1.6.2_0  is the latest installed
837:debug:main Xaw3d 1.6.2_0  is active
838:debug:main Merging existing variants '' into variants
839:debug:main new fully merged portvariants:
840:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/Xaw3d
841:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
842:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
843:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
844:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
845:debug:main adding the default universal variant
846:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
847:debug:main No need to upgrade! Xaw3d 1.6.2_0 >= Xaw3d 1.6.2_0
848:debug:main epoch: in tree: 0 installed: 0
849:debug:main xpm 3.5.10_0 exists in the ports tree
850:debug:main xpm 3.5.10_0  is the latest installed
851:debug:main xpm 3.5.10_0  is active
852:debug:main Merging existing variants '' into variants
853:debug:main new fully merged portvariants:
854:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xpm
855:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
856:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
857:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
858:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
859:debug:main adding the default universal variant
860:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
861:debug:main No need to upgrade! xpm 3.5.10_0 >= xpm 3.5.10_0
862:debug:main epoch: in tree: 0 installed: 0
863:debug:main ghostscript 9.06_1 exists in the ports tree
864:debug:main ghostscript 9.06_1  is the latest installed
865:debug:main ghostscript 9.06_1  is active
866:debug:main Merging existing variants '' into variants
867:debug:main new fully merged portvariants:
868:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/ghostscript
869:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
870:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
871:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
872:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
873:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
874:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
875:debug:main universal variant already exists, so not adding the default one
876:debug:main No need to upgrade! ghostscript 9.06_1 >= ghostscript 9.06_1
877:debug:main epoch: in tree: 0 installed: 0
878:debug:main jbig2dec 0.11_1 exists in the ports tree
879:debug:main jbig2dec 0.11_1  is the latest installed
880:debug:main jbig2dec 0.11_1  is active
881:debug:main Merging existing variants '' into variants
882:debug:main new fully merged portvariants:
883:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jbig2dec
884:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
885:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
886:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
887:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
888:debug:main adding the default universal variant
889:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
890:debug:main No need to upgrade! jbig2dec 0.11_1 >= jbig2dec 0.11_1
891:debug:main epoch: in tree: 0 installed: 0
892:debug:main lcms2 2.4_0 exists in the ports tree
893:debug:main lcms2 2.4_0  is the latest installed
894:debug:main lcms2 2.4_0  is active
895:debug:main Merging existing variants '' into variants
896:debug:main new fully merged portvariants:
897:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/lcms2
898:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
899:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
900:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
901:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
902:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
903:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
904:debug:main universal variant already exists, so not adding the default one
905:debug:main No need to upgrade! lcms2 2.4_0 >= lcms2 2.4_0
906:debug:main epoch: in tree: 0 installed: 0
907:debug:main tiff 3.9.5_0 exists in the ports tree
908:debug:main tiff 3.9.5_0  is the latest installed
909:debug:main tiff 3.9.5_0  is active
910:debug:main Merging existing variants '' into variants
911:debug:main new fully merged portvariants:
912:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/tiff
913:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
914:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
915:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
916:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
917:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
918:debug:main adding the default universal variant
919:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
920:debug:main No need to upgrade! tiff 3.9.5_0 >= tiff 3.9.5_0
921:debug:main epoch: in tree: 0 installed: 0
922:debug:main libidn 1.25_0 exists in the ports tree
923:debug:main libidn 1.25_0  is the latest installed
924:debug:main libidn 1.25_0  is active
925:debug:main Merging existing variants '' into variants
926:debug:main new fully merged portvariants:
927:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/mail/libidn
928:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
929:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
930:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
931:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
932:debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/conflicts_build-1.0.tcl
933:debug:main adding the default universal variant
934:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
935:debug:main No need to upgrade! libidn 1.25_0 >= libidn 1.25_0
936:debug:main epoch: in tree: 0 installed: 0
937:debug:main libpaper 1.1.24_0 exists in the ports tree
938:debug:main libpaper 1.1.24_0  is the latest installed
939:debug:main libpaper 1.1.24_0  is active
940:debug:main Merging existing variants '' into variants
941:debug:main new fully merged portvariants:
942:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/libpaper
943:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
944:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
945:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
946:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
947:debug:main adding the default universal variant
948:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
949:debug:main No need to upgrade! libpaper 1.1.24_0 >= libpaper 1.1.24_0
950:debug:main epoch: in tree: 0 installed: 0
951:debug:main transfig 3.2.5d_3 exists in the ports tree
952:debug:main transfig 3.2.5d_3  is the latest installed
953:debug:main transfig 3.2.5d_3  is active
954:debug:main Merging existing variants '' into variants
955:debug:main new fully merged portvariants:
956:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/transfig
957:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
958:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
959:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
960:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
961:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
962:debug:main universal variant already exists, so not adding the default one
963:debug:main No need to upgrade! transfig 3.2.5d_3 >= transfig 3.2.5d_3
964:debug:main epoch: in tree: 0 installed: 0
965:debug:main netpbm 10.59.00_1 exists in the ports tree
966:debug:main netpbm 10.59.00_1  is the latest installed
967:debug:main netpbm 10.59.00_1  is active
968:debug:main Merging existing variants '' into variants
969:debug:main new fully merged portvariants:
970:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/netpbm
971:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
972:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
973:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
974:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
975:debug:main adding the default universal variant
976:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
977:debug:main No need to upgrade! netpbm 10.59.00_1 >= netpbm 10.59.00_1
978:debug:main epoch: in tree: 0 installed: 0
979:debug:main jasper 1.900.1_9 exists in the ports tree
980:debug:main jasper 1.900.1_9  is the latest installed
981:debug:main jasper 1.900.1_9  is active
982:debug:main Merging existing variants '' into variants
983:debug:main new fully merged portvariants:
984:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jasper
985:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
986:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
987:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
988:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
989:debug:main adding the default universal variant
990:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
991:debug:main No need to upgrade! jasper 1.900.1_9 >= jasper 1.900.1_9
992:debug:main epoch: in tree: 0 installed: 0
993:debug:main jbigkit 2.0_2 exists in the ports tree
994:debug:main jbigkit 2.0_2  is the latest installed
995:debug:main jbigkit 2.0_2  is active
996:debug:main Merging existing variants '' into variants
997:debug:main new fully merged portvariants:
998:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jbigkit
999:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
1000:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
1001:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
1002:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
1003:debug:main adding the default universal variant
1004:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1005:debug:main No need to upgrade! jbigkit 2.0_2 >= jbigkit 2.0_2
1006:debug:main epoch: in tree: 0 installed: 0
1007:debug:main gv 3.7.3.90_1 exists in the ports tree
1008:debug:main gv 3.7.3.90_1  is the latest installed
1009:debug:main gv 3.7.3.90_1  is active
1010:debug:main Merging existing variants '' into variants
1011:debug:main new fully merged portvariants:
1012:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/gv
1013:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
1014:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
1015:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
1016:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
1017:debug:main adding the default universal variant
1018:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1019:debug:main No need to upgrade! gv 3.7.3.90_1 >= gv 3.7.3.90_1
1020:debug:main epoch: in tree: 0 installed: 0
1021:debug:main xorg-libXinerama 1.1.2_0 exists in the ports tree
1022:debug:main xorg-libXinerama 1.1.2_0  is the latest installed
1023:debug:main xorg-libXinerama 1.1.2_0  is active
1024:debug:main Merging existing variants '' into variants
1025:debug:main new fully merged portvariants:
1026:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXinerama
1027:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
1028:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
1029:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
1030:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
1031:debug:main adding the default universal variant
1032:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1033:debug:main No need to upgrade! xorg-libXinerama 1.1.2_0 >= xorg-libXinerama 1.1.2_0
1034:debug:main epoch: in tree: 0 installed: 0
1035:debug:main xorg-xineramaproto 1.2.1_0 exists in the ports tree
1036:debug:main xorg-xineramaproto 1.2.1_0  is the latest installed
1037:debug:main xorg-xineramaproto 1.2.1_0  is active
1038:debug:main Merging existing variants '' into variants
1039:debug:main new fully merged portvariants:
1040:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xineramaproto
1041:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
1042:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
1043:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
1044:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
1045:debug:main only one arch supported, so not adding the default universal variant
1046:debug:main No need to upgrade! xorg-xineramaproto 1.2.1_0 >= xorg-xineramaproto 1.2.1_0
1047:debug:main epoch: in tree: 0 installed: 0
1048:debug:main xorg-libXaw 1.0.11_0 exists in the ports tree
1049:debug:main xorg-libXaw 1.0.11_0  is the latest installed
1050:debug:main xorg-libXaw 1.0.11_0  is active
1051:debug:main Merging existing variants '' into variants
1052:debug:main new fully merged portvariants:
1053:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXaw
1054:debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386
1055:debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
1056:debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
1057:debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
1058:debug:main adding the default universal variant
1059:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1060:debug:main No need to upgrade! xorg-libXaw 1.0.11_0 >= xorg-libXaw 1.0.11_0
1061:msg:main --->  Computing dependencies for arb:info:main .:debug:main Searching for dependency: imake
1062:debug:main Found Dependency: receipt exists for imake
1063:debug:main Searching for dependency: makedepend
1064:debug:main Found Dependency: receipt exists for makedepend
1065:debug:main Searching for dependency: openmotif
1066:debug:main Found Dependency: receipt exists for openmotif
1067:debug:main Searching for dependency: lynx
1068:debug:main Found Dependency: receipt exists for lynx
1069:debug:main Searching for dependency: gsed
1070:debug:main Found Dependency: receipt exists for gsed
1071:debug:main Searching for dependency: sablotron
1072:debug:main Found Dependency: receipt exists for sablotron
1073:debug:main Searching for dependency: glw
1074:debug:main Found Dependency: receipt exists for glw
1075:debug:main Searching for dependency: glew
1076:debug:main Found Dependency: receipt exists for glew
1077:debug:main Searching for dependency: xfig
1078:debug:main Found Dependency: receipt exists for xfig
1079:debug:main Searching for dependency: gv
1080:debug:main Found Dependency: receipt exists for gv
1081:debug:main Searching for dependency: xorg-libXaw
1082:debug:main Found Dependency: receipt exists for xorg-libXaw
1083:msg:main
1084:debug:main Executing org.macports.main (arb)
1085:debug:main changing euid/egid - current euid: 0 - current egid: 0
1086:debug:main egid changed to: 501
1087:debug:main euid changed to: 503
1088:debug:main Skipping completed org.macports.fetch (arb)
1089:debug:main Privilege de-escalation not attempted as not running as root.
1090:debug:main Skipping completed org.macports.checksum (arb)
1091:debug:main Privilege de-escalation not attempted as not running as root.
1092:debug:main Skipping completed org.macports.extract (arb)
1093:debug:main Privilege de-escalation not attempted as not running as root.
1094:debug:main Skipping completed org.macports.patch (arb)
1095:debug:main Privilege de-escalation not attempted as not running as root.
1096:debug:configure configure phase started at Thu Oct  4 16:48:16 PDT 2012
1097:notice:configure --->  Configuring arb
1098:debug:configure Using compiler 'Mac OS X llvm-gcc 4.2'
1099:debug:configure Executing org.macports.configure (arb)
1100:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/MENUS/align.menu >@ file10
1101:debug:configure euid/egid changed to: 0/0
1102:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/MENUS/align.menu to macports
1103:debug:configure euid/egid changed to: 503/501
1104:debug:configure euid/egid changed to: 0/0
1105:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/MENUS/align.menu
1106:debug:configure euid/egid changed to: 503/501
1107:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/util/arb_check_build_env.pl >@ file10
1108:debug:configure euid/egid changed to: 0/0
1109:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/util/arb_check_build_env.pl to macports
1110:debug:configure euid/egid changed to: 503/501
1111:debug:configure euid/egid changed to: 0/0
1112:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/util/arb_check_build_env.pl
1113:debug:configure euid/egid changed to: 503/501
1114:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/arb_install.sh >@ file10
1115:debug:configure euid/egid changed to: 0/0
1116:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/arb_install.sh to macports
1117:debug:configure euid/egid changed to: 503/501
1118:debug:configure euid/egid changed to: 0/0
1119:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/arb_install.sh
1120:debug:configure euid/egid changed to: 503/501
1121:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW/AW_status.cxx >@ file10
1122:debug:configure euid/egid changed to: 0/0
1123:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW/AW_status.cxx to macports
1124:debug:configure euid/egid changed to: 503/501
1125:debug:configure euid/egid changed to: 0/0
1126:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW/AW_status.cxx
1127:debug:configure euid/egid changed to: 503/501
1128:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SH/example_batch_probe_match.sh >@ file10
1129:debug:configure euid/egid changed to: 0/0
1130:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SH/example_batch_probe_match.sh to macports
1131:debug:configure euid/egid changed to: 503/501
1132:debug:configure euid/egid changed to: 0/0
1133:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SH/example_batch_probe_match.sh
1134:debug:configure euid/egid changed to: 503/501
1135:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/GDEmenus >@ file10
1136:debug:configure euid/egid changed to: 0/0
1137:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/GDEmenus to macports
1138:debug:configure euid/egid changed to: 503/501
1139:debug:configure euid/egid changed to: 0/0
1140:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/GDEmenus
1141:debug:configure euid/egid changed to: 503/501
1142:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelp.sh >@ file10
1143:debug:configure euid/egid changed to: 0/0
1144:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelp.sh to macports
1145:debug:configure euid/egid changed to: 503/501
1146:debug:configure euid/egid changed to: 0/0
1147:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelp.sh
1148:debug:configure euid/egid changed to: 503/501
1149:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelptree.sh >@ file10
1150:debug:configure euid/egid changed to: 0/0
1151:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelptree.sh to macports
1152:debug:configure euid/egid changed to: 503/501
1153:debug:configure euid/egid changed to: 0/0
1154:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/genhelptree.sh
1155:debug:configure euid/egid changed to: 503/501
1156:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/make_java_dependencies.sh >@ file10
1157:debug:configure euid/egid changed to: 0/0
1158:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/make_java_dependencies.sh to macports
1159:debug:configure euid/egid changed to: 503/501
1160:debug:configure euid/egid changed to: 0/0
1161:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/make_java_dependencies.sh
1162:debug:configure euid/egid changed to: 503/501
1163:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/Makefile >@ file10
1164:debug:configure euid/egid changed to: 0/0
1165:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/Makefile to macports
1166:debug:configure euid/egid changed to: 503/501
1167:debug:configure euid/egid changed to: 0/0
1168:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/Makefile
1169:debug:configure euid/egid changed to: 503/501
1170:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_COM/AISC/Makefile >@ file10
1171:debug:configure euid/egid changed to: 0/0
1172:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_COM/AISC/Makefile to macports
1173:debug:configure euid/egid changed to: 503/501
1174:debug:configure euid/egid changed to: 0/0
1175:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_COM/AISC/Makefile
1176:debug:configure euid/egid changed to: 503/501
1177:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile >@ file10
1178:debug:configure euid/egid changed to: 0/0
1179:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile to macports
1180:debug:configure euid/egid changed to: 503/501
1181:debug:configure euid/egid changed to: 0/0
1182:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile
1183:debug:configure euid/egid changed to: 503/501
1184:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/genhelp/Makefile >@ file10
1185:debug:configure euid/egid changed to: 0/0
1186:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/genhelp/Makefile to macports
1187:debug:configure euid/egid changed to: 503/501
1188:debug:configure euid/egid changed to: 0/0
1189:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/genhelp/Makefile
1190:debug:configure euid/egid changed to: 503/501
1191:debug:configure Executing reinplace: /usr/bin/sed {s| sed | gsed |g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile.helpfiles >@ file10
1192:debug:configure euid/egid changed to: 0/0
1193:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile.helpfiles to macports
1194:debug:configure euid/egid changed to: 503/501
1195:debug:configure euid/egid changed to: 0/0
1196:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP/Makefile.helpfiles
1197:debug:configure euid/egid changed to: 503/501
1198:debug:configure Executing reinplace: /usr/bin/sed s|@@LIBPERLDIR@@|/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/DARWIN.PL >@ file10
1199:debug:configure euid/egid changed to: 0/0
1200:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/DARWIN.PL to macports
1201:debug:configure euid/egid changed to: 503/501
1202:debug:configure euid/egid changed to: 0/0
1203:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/DARWIN.PL
1204:debug:configure euid/egid changed to: 503/501
1205:debug:configure Executing reinplace: /usr/bin/sed s|@@PREFIX@@|/opt/local|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_macsetup >@ file10
1206:debug:configure euid/egid changed to: 0/0
1207:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_macsetup to macports
1208:debug:configure euid/egid changed to: 503/501
1209:debug:configure euid/egid changed to: 0/0
1210:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_macsetup
1211:debug:configure euid/egid changed to: 503/501
1212:debug:configure Executing reinplace: /usr/bin/sed s|@@64BIT@@|1|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/config.makefile >@ file10
1213:debug:configure euid/egid changed to: 0/0
1214:debug:configure chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/config.makefile to macports
1215:debug:configure euid/egid changed to: 503/501
1216:debug:configure euid/egid changed to: 0/0
1217:debug:configure setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/config.makefile
1218:debug:configure euid/egid changed to: 503/501
1219:debug:configure Privilege de-escalation not attempted as not running as root.
1220:debug:build build phase started at Thu Oct  4 16:48:16 PDT 2012
1221:notice:build --->  Building arb
1222:debug:build Executing org.macports.build (arb)
1223:debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6' PATH='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin:/opt/local/bin:/opt/local/sbin:/bin:/sbin:/usr/bin:/usr/sbin' ARBHOME='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210' PREFIX='/opt/local'
1224:debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210" && /usr/bin/make -j2 -w all GCC=/usr/bin/llvm-gcc-4.2 GPP=/usr/bin/llvm-g++-4.2'
1225:debug:build Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210" && /usr/bin/make -j2 -w all GCC=/usr/bin/llvm-gcc-4.2 GPP=/usr/bin/llvm-g++-4.2
1226:info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1227:info:build GCC version check:
1228:info:build   - Your version is '4.2.1'
1229:info:build   - Supported gcc version '4.2.1' detected - fine!
1230:info:build
1231:info:build /usr/bin/make check_same_GCC_VERSION
1232:info:build All tools needed for ARB compilation have been located.
1233:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1234:info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/check_same_gcc_version.pl 4.2.1
1235:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1236:info:build Your setup seems to be ok.
1237:info:build /usr/bin/make links
1238:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1239:info:build SOURCE_TOOLS/generate_all_links.sh
1240:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
1241:info:build find . -type l -exec rm {} \;
1242:info:build ln -s -f `find ../SH ../PERL_SCRIPTS -perm -100 ! -type d ! -name 'config*' -print` .
1243:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
1244:info:build generate_all_links.sh done.
1245:info:build touch SOURCE_TOOLS/generate_all_links.stamp
1246:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1247:info:build /usr/bin/make com
1248:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1249:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
1250:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1251:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC_MKPTPS -c mkptypes.c
1252:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC_MKPTPS -o aisc_mkpt mkptypes.o
1253:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1254:info:build -------------------------------------------------------------------------------- Make everything in AISC
1255:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1256:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC -c aisc.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1257:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC -c aisc_commands.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1258:info:build aisc_commands.c: In function ‘int do_com_if(char*)’:
1259:info:build aisc_commands.c:673: warning: suggest a space before ‘;’ or explicit braces around empty body in ‘while’ statement
1260:info:build aisc_commands.c:681: warning: suggest a space before ‘;’ or explicit braces around empty body in ‘while’ statement
1261:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC -c aisc_var_ref.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1262:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC -c aisc_mix.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1263:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AISC -o aisc aisc.o aisc_commands.o aisc_var_ref.o aisc_mix.o
1264:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1265:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
1266:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1267:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1268:info:build AISC/Makefile:95: .depends: No such file or directory
1269:info:build umask 002;makedepend C/*.c GENC/*.c -I GENH -I C -f- -w1 | grep -v ' /usr' | gsed -e 's/^C/O/ig' > .depends_new
1270:info:build makedepend: warning:  C/aisc_extern.c, line 3: cannot find include file "aisc.h"
1271:info:build     not in GENH/aisc.h
1272:info:build     not in C/aisc.h
1273:info:build     not in /usr/include/aisc.h
1274:info:build makedepend: warning:  C/aisc_extern.c (reading C/aisc_extern_privat.h, line 19): cannot find include file "attributes.h"
1275:info:build     not in GENH/attributes.h
1276:info:build     not in C/attributes.h
1277:info:build     not in /usr/include/attributes.h
1278:info:build makedepend: warning:  C/client.c (reading /usr/include/stdarg.h, line 4): cannot find include file "stdarg.h"
1279:info:build makedepend: warning:  C/client.c (reading C/client.h, line 22): cannot find include file "attributes.h"
1280:info:build     not in GENH/attributes.h
1281:info:build     not in C/attributes.h
1282:info:build     not in /usr/include/attributes.h
1283:info:build makedepend: warning:  C/debug.c, line 6: cannot find include file "aisc_com.h"
1284:info:build     not in GENH/aisc_com.h
1285:info:build     not in C/aisc_com.h
1286:info:build     not in /usr/include/aisc_com.h
1287:info:build makedepend: warning:  C/server.c, line 33: cannot find include file "aisc_com.h"
1288:info:build     not in aisc_com.h
1289:info:build     not in C/aisc_com.h
1290:info:build     not in GENH/aisc_com.h
1291:info:build     not in C/aisc_com.h
1292:info:build     not in /usr/include/aisc_com.h
1293:info:build makedepend: warning:  C/server.c (reading C/server.h, line 22): cannot find include file "attributes.h"
1294:info:build     not in GENH/attributes.h
1295:info:build     not in C/attributes.h
1296:info:build     not in /usr/include/attributes.h
1297:info:build makedepend: warning:  C/server.c (reading ../INCLUDE/arb_assert.h), line 33: #  error Neither DEBUG nor NDEBUG is defined!
1298:info:build makedepend: warning:  C/server.c (reading ../INCLUDE/arb_assert.h, line 183): cannot find include file "arbdb_base.h"
1299:info:build     not in GENH/arbdb_base.h
1300:info:build     not in C/arbdb_base.h
1301:info:build     not in /usr/include/arbdb_base.h
1302:info:build makedepend: warning:  C/struct_man.c, line 5: cannot find include file "aisc.h"
1303:info:build     not in aisc.h
1304:info:build     not in C/aisc.h
1305:info:build     not in GENH/aisc.h
1306:info:build     not in C/aisc.h
1307:info:build     not in /usr/include/aisc.h
1308:info:build makedepend: warning:  C/struct_man.c (reading C/struct_man.h, line 19): cannot find include file "attributes.h"
1309:info:build     not in GENH/attributes.h
1310:info:build     not in C/attributes.h
1311:info:build     not in /usr/include/attributes.h
1312:info:build makedepend: warning:  cannot open "GENC/*.c"
1313:info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/mv_if_diff .depends_new .depends
1314:info:build .depends created.
1315:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1316:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1317:info:build ../MAKEBIN/aisc AISC/aisc.pa names.aisc GENH/aisc.h
1318:info:build ../MAKEBIN/aisc AISC/aisc_com.pa names.aisc GENH/aisc_com.h
1319:info:build rm -f GENH/aisc_server_extern.aisc
1320:info:build ../MAKEBIN/aisc_mkpt -a C/aisc_extern.c names_extern.c >GENH/aisc_server_extern.aisc
1321:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/server.o C/server.c -IGENH -I. -IC
1322:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/struct_man.o C/struct_man.c -IGENH -I. -IC
1323:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/aisc_extern.o C/aisc_extern.c -IGENH -I. -IC
1324:info:build ../MAKEBIN/aisc AISC/aisc_server.pa names.aisc GENC/aisc_server.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1325:info:build rm -f GENH/aisc_server_extern.h
1326:info:build ../MAKEBIN/aisc_mkpt -C C/aisc_extern.c names_extern.c >GENH/aisc_server_extern.h
1327:info:build ../MAKEBIN/aisc AISC/aisc_global.pa names.aisc GENC/aisc_global.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1328:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/client.o C/client.c -IGENH -I. -IC
1329:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/debug.o C/debug.c -IGENH -I. -IC
1330:info:build ../MAKEBIN/aisc AISC/aisc_debug_globals.pa names.aisc GENC/aisc_debug_globals.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1331:info:build rm -f GENH/aisc_server_proto.h
1332:info:build ../MAKEBIN/aisc_mkpt -C GENC/aisc_server.c >GENH/aisc_server_proto.h
1333:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_debug_globals.o GENC/aisc_debug_globals.c -IGENH -I. -IC
1334:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_global.o GENC/aisc_global.c -IGENH -I. -IC -DAISC_SAVE_YES
1335:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_server.o GENC/aisc_server.c -IGENH -I. -IC -DAISC_SAVE_YES
1336:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o names_extern.o names_extern.c -IGENH -I. -IC -DAISC_SAVE_YES
1337:info:build ld   -arch x86_64  -r -o client.a O/client.o O/debug.o GENC/aisc_debug_globals.o
1338:info:build ld   -arch x86_64  -r -o server.a O/server.o O/struct_man.o O/aisc_extern.o GENC/aisc_global.o GENC/aisc_server.o names_extern.o
1339:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1340:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1341:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
1342:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1343:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1344:info:build AISC/Makefile:95: .depends: No such file or directory
1345:info:build umask 002;makedepend C/*.c GENC/*.c -I GENH -I C -f- -w1 | grep -v ' /usr' | gsed -e 's/^C/O/ig' > .depends_new
1346:info:build makedepend: warning:  C/aisc_extern.c, line 3: cannot find include file "aisc.h"
1347:info:build     not in GENH/aisc.h
1348:info:build     not in C/aisc.h
1349:info:build     not in /usr/include/aisc.h
1350:info:build makedepend: warning:  C/aisc_extern.c (reading C/aisc_extern_privat.h, line 19): cannot find include file "attributes.h"
1351:info:build     not in GENH/attributes.h
1352:info:build     not in C/attributes.h
1353:info:build     not in /usr/include/attributes.h
1354:info:build makedepend: warning:  C/client.c (reading /usr/include/stdarg.h, line 4): cannot find include file "stdarg.h"
1355:info:build makedepend: warning:  C/client.c (reading C/client.h, line 22): cannot find include file "attributes.h"
1356:info:build     not in GENH/attributes.h
1357:info:build     not in C/attributes.h
1358:info:build     not in /usr/include/attributes.h
1359:info:build makedepend: warning:  C/debug.c, line 6: cannot find include file "aisc_com.h"
1360:info:build     not in GENH/aisc_com.h
1361:info:build     not in C/aisc_com.h
1362:info:build     not in /usr/include/aisc_com.h
1363:info:build makedepend: warning:  C/server.c, line 33: cannot find include file "aisc_com.h"
1364:info:build     not in aisc_com.h
1365:info:build     not in C/aisc_com.h
1366:info:build     not in GENH/aisc_com.h
1367:info:build     not in C/aisc_com.h
1368:info:build     not in /usr/include/aisc_com.h
1369:info:build makedepend: warning:  C/server.c (reading C/server.h, line 22): cannot find include file "attributes.h"
1370:info:build     not in GENH/attributes.h
1371:info:build     not in C/attributes.h
1372:info:build     not in /usr/include/attributes.h
1373:info:build makedepend: warning:  C/server.c (reading ../INCLUDE/arb_assert.h), line 33: #  error Neither DEBUG nor NDEBUG is defined!
1374:info:build makedepend: warning:  C/server.c (reading ../INCLUDE/arb_assert.h, line 183): cannot find include file "arbdb_base.h"
1375:info:build     not in GENH/arbdb_base.h
1376:info:build     not in C/arbdb_base.h
1377:info:build     not in /usr/include/arbdb_base.h
1378:info:build makedepend: warning:  C/struct_man.c, line 5: cannot find include file "aisc.h"
1379:info:build     not in aisc.h
1380:info:build     not in C/aisc.h
1381:info:build     not in GENH/aisc.h
1382:info:build     not in C/aisc.h
1383:info:build     not in /usr/include/aisc.h
1384:info:build makedepend: warning:  C/struct_man.c (reading C/struct_man.h, line 19): cannot find include file "attributes.h"
1385:info:build     not in GENH/attributes.h
1386:info:build     not in C/attributes.h
1387:info:build     not in /usr/include/attributes.h
1388:info:build makedepend: warning:  cannot open "GENC/*.c"
1389:info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SOURCE_TOOLS/mv_if_diff .depends_new .depends
1390:info:build .depends created.
1391:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1392:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1393:info:build ../MAKEBIN/aisc AISC/aisc.pa PT.aisc GENH/aisc.h
1394:info:build ../MAKEBIN/aisc AISC/aisc_com.pa PT.aisc GENH/aisc_com.h
1395:info:build rm -f GENH/aisc_server_extern.aisc
1396:info:build ../MAKEBIN/aisc_mkpt -a C/aisc_extern.c PT_extern.c >GENH/aisc_server_extern.aisc
1397:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/server.o C/server.c -IGENH -I. -IC
1398:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/struct_man.o C/struct_man.c -IGENH -I. -IC
1399:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/aisc_extern.o C/aisc_extern.c -IGENH -I. -IC
1400:info:build ../MAKEBIN/aisc AISC/aisc_server.pa PT.aisc GENC/aisc_server.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1401:info:build rm -f GENH/aisc_server_extern.h
1402:info:build ../MAKEBIN/aisc_mkpt -C C/aisc_extern.c PT_extern.c >GENH/aisc_server_extern.h
1403:info:build ../MAKEBIN/aisc AISC/aisc_global.pa PT.aisc GENC/aisc_global.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1404:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/client.o C/client.c -IGENH -I. -IC
1405:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o O/debug.o C/debug.c -IGENH -I. -IC
1406:info:build ../MAKEBIN/aisc AISC/aisc_debug_globals.pa PT.aisc GENC/aisc_debug_globals.c GENH/aisc_server_extern.aisc GENH/import_proto.h
1407:info:build rm -f GENH/aisc_server_proto.h
1408:info:build ../MAKEBIN/aisc_mkpt -C GENC/aisc_server.c >GENH/aisc_server_proto.h
1409:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_debug_globals.o GENC/aisc_debug_globals.c -IGENH -I. -IC
1410:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_global.o GENC/aisc_global.c -IGENH -I. -IC -DAISC_SAVE_NO
1411:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o GENC/aisc_server.o GENC/aisc_server.c -IGENH -I. -IC -DAISC_SAVE_NO
1412:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_COM -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -fno-strict-aliasing -Wno-unused -c -o PT_extern.o PT_extern.c -IGENH -I. -IC -DAISC_SAVE_NO
1413:info:build ld   -arch x86_64  -r -o client.a O/client.o O/debug.o GENC/aisc_debug_globals.o
1414:info:build ld   -arch x86_64  -r -o server.a O/server.o O/struct_man.o O/aisc_extern.o GENC/aisc_global.o GENC/aisc_server.o PT_extern.o
1415:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1416:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1417:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1418:info:build /usr/bin/make arb
1419:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1420:info:build (cd lib;/usr/bin/make all)
1421:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib'
1422:info:build test -e arb_tcp.dat || cp -p arb_tcp_org.dat arb_tcp.dat
1423:info:build test -L nas && echo "lib/nas is a link - skipped" || \
1424:info:build             (cd nas;/usr/bin/make all)
1425:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib/nas'
1426:info:build rm -f names.dat
1427:info:build cp names.dat.template names.dat
1428:info:build rm -f *%
1429:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib/nas'
1430:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib'
1431:info:build /usr/bin/make arbbasic2
1432:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1433:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
1434:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1435:info:build make[3]: Nothing to be done for `dummy.a'.
1436:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1437:info:build -------------------------------------------------------------------------------- Make everything in AISC
1438:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1439:info:build make[3]: Nothing to be done for `dummy.a'.
1440:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1441:info:build -------------------------------------------------------------------------------- Make everything in TEMPLATES
1442:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TEMPLATES'
1443:info:build ../SOURCE_TOOLS/build_info.pl
1444:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TEMPLATES'
1445:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
1446:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1447:info:build make[3]: `server.a' is up to date.
1448:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1449:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
1450:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1451:info:build make[3]: `server.a' is up to date.
1452:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
1453:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
1454:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1455:info:build make[3]: `server.a' is up to date.
1456:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
1457:info:build /usr/bin/make SL/SL.dummy
1458:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1459:info:build -------------------------------------------------------------------------------- Make everything in SL
1460:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
1461:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
1462:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_TREE_READ -c TreeRead.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1463:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_TREE_READ -c TreeTools.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1464:info:build ld   -arch x86_64  -r -o TREE_READ.a  TreeRead.o TreeTools.o
1465:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
1466:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
1467:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_TREE_WRITE -c TreeWrite.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1468:info:build ld   -arch x86_64  -r -o TREE_WRITE.a  TreeWrite.o
1469:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
1470:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
1471:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_HELIX -c BI_helix.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1472:info:build ld   -arch x86_64  -r -o HELIX.a  BI_helix.o
1473:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
1474:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
1475:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_AW_HELIX -c AW_helix.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1476:info:build ld   -arch x86_64  -r -o AW_HELIX.a  AW_helix.o
1477:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
1478:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
1479:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_DB_SCANNER -c db_scanner.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1480:info:build ld   -arch x86_64  -r -o DB_SCANNER.a  db_scanner.o
1481:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
1482:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
1483:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_AW_NAME -c AW_rename.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1484:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_AW_NAME -c AW_names_admin.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1485:info:build ld   -arch x86_64  -r -o AW_NAME.a  AW_rename.o AW_names_admin.o
1486:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
1487:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
1488:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_FILE_BUFFER -c FileBuffer.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1489:info:build ld   -arch x86_64  -r -o FILE_BUFFER.a  FileBuffer.o
1490:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
1491:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
1492:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_REGEXPR -c RegExpr.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1493:info:build ld   -arch x86_64  -r -o REGEXPR.a  RegExpr.o
1494:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
1495:info:build make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
1496:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_FAST_ALIGNER -c ClustalV.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1497:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SL -DIN_ARB_FAST_ALIGNER -c fast_aligner.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1498:info:build fast_aligner.cxx: In function ‘const char* alignCompactedTo(AWTC_CompactedSubSequence*, const AWTC_FastSearchSequence*, int, const char*, long int, GBDATA*, GBDATA*, const AlignParams&)’:
1499:info:build fast_aligner.cxx:1254: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1500:info:build fast_aligner.cxx:1254: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1501:info:build ld   -arch x86_64  -r -o FAST_ALIGNER.a  ClustalV.o fast_aligner.o
1502:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
1503:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
1504:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1505:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1506:info:build /usr/bin/make arbshared arbapplications help
1507:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1508:info:build -------------------------------------------------------------------------------- Make everything in ARBDB
1509:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
1510:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adsort.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1511:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adlang1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1512:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adstring.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1513:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c admatch.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1514:info:build admatch.c: In function ‘GBS_string_eval’:
1515:info:build admatch.c:763: warning: ignoring return value of ‘gbs_build_replace_string’, declared with attribute warn_unused_result
1516:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c arbdb.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1517:info:build arbdb.c: In function ‘GB_copy_with_protection’:
1518:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1519:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1520:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c ad_core.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1521:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c admath.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1522:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adoptimize.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1523:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adsystem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1524:info:build adsystem.c: In function ‘gb_load_single_key_data’:
1525:info:build adsystem.c:141: warning: cast to pointer from integer of different size
1526:info:build adsystem.c:159: warning: cast to pointer from integer of different size
1527:info:build adsystem.c:160: warning: cast to pointer from integer of different size
1528:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adindex.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1529:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adperl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1530:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adlink.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1531:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adsocket.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1532:info:build adsocket.c:1160:2: warning: #warning memsize detection needs to be tested for Darwin
1533:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adcomm.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1534:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adhash.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1535:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adquery.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1536:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c ad_save_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1537:info:build ad_save_load.c: In function ‘gb_write_bin_rek’:
1538:info:build ad_save_load.c:799: warning: null argument where non-null required (argument 1)
1539:info:build ad_save_load.c: In function ‘GB_save_as’:
1540:info:build ad_save_load.c:1079: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1541:info:build ad_save_load.c: In function ‘GB_save_quick_as’:
1542:info:build ad_save_load.c:1126: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1543:info:build ad_save_load.c:1148: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1544:info:build ad_save_load.c:1173: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1545:info:build ad_save_load.c:1184: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1546:info:build ad_save_load.c: In function ‘GB_save_quick’:
1547:info:build ad_save_load.c:1213: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1548:info:build ad_save_load.c:1234: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1549:info:build ad_save_load.c:1267: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1550:info:build ad_save_load.c: In function ‘gb_check_saveable’:
1551:info:build ad_save_load.c:1307: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1552:info:build ad_save_load.c:1312: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1553:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1554:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c admalloc.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1555:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c ad_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1556:info:build ad_load.c: In function ‘GB_login’:
1557:info:build ad_load.c:1380: warning: ignoring return value of ‘gb_scan_directory’, declared with attribute warn_unused_result
1558:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c admap.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1559:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adTest.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1560:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adtune.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1561:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adGene.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1562:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adtcp.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1563:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adhashtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1564:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adExperiment.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1565:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1566:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adseqcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1567:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adtables.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1568:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adRevCompl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1569:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adChangeKey.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1570:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adali.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1571:info:build adali.c: In function ‘GBT_create_sequence_data’:
1572:info:build adali.c:597: warning: ‘GBT_add_data’ is deprecated (declared at adali.c:568)
1573:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adcolumns.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1574:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adtree.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1575:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c adname.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1576:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c aditem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1577:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c arbdbpp.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1578:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB -c ad_config.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1579:info:build ld   -arch x86_64  -r -o libARBDB.a adsort.o adlang1.o adstring.o admatch.o arbdb.o ad_core.o admath.o adoptimize.o adsystem.o adindex.o adperl.o adlink.o adsocket.o adcomm.o adhash.o adquery.o ad_save_load.o adcompr.o admalloc.o ad_load.o admap.o adTest.o adtune.o adGene.o adtcp.o adhashtools.o adExperiment.o adtools.o adseqcompr.o adtables.o adRevCompl.o adChangeKey.o adali.o adcolumns.o adtree.o adname.o aditem.o arbdbpp.o ad_config.o
1580:info:build touch libARBDB.a
1581:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
1582:info:build -------------------------------------------------------------------------------- Make everything in ARBDBS
1583:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
1584:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adsort.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1585:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adlang1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1586:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adstring.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1587:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c admatch.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1588:info:build admatch.c: In function ‘GBS_string_eval’:
1589:info:build admatch.c:763: warning: ignoring return value of ‘gbs_build_replace_string’, declared with attribute warn_unused_result
1590:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c arbdb.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1591:info:build arbdb.c: In function ‘GB_copy_with_protection’:
1592:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1593:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1594:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c ad_core.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1595:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c admath.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1596:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adoptimize.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1597:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adsystem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1598:info:build adsystem.c: In function ‘gb_load_single_key_data’:
1599:info:build adsystem.c:141: warning: cast to pointer from integer of different size
1600:info:build adsystem.c:159: warning: cast to pointer from integer of different size
1601:info:build adsystem.c:160: warning: cast to pointer from integer of different size
1602:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adindex.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1603:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adperl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1604:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adlink.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1605:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adsocket.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1606:info:build adsocket.c:1160:2: warning: #warning memsize detection needs to be tested for Darwin
1607:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adcomm.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1608:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adhash.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1609:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adquery.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1610:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c ad_save_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1611:info:build ad_save_load.c: In function ‘gb_write_bin_rek’:
1612:info:build ad_save_load.c:799: warning: null argument where non-null required (argument 1)
1613:info:build ad_save_load.c: In function ‘GB_save_as’:
1614:info:build ad_save_load.c:1079: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1615:info:build ad_save_load.c: In function ‘GB_save_quick_as’:
1616:info:build ad_save_load.c:1126: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1617:info:build ad_save_load.c:1148: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1618:info:build ad_save_load.c:1173: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1619:info:build ad_save_load.c:1184: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1620:info:build ad_save_load.c: In function ‘GB_save_quick’:
1621:info:build ad_save_load.c:1213: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1622:info:build ad_save_load.c:1234: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1623:info:build ad_save_load.c:1267: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1624:info:build ad_save_load.c: In function ‘gb_check_saveable’:
1625:info:build ad_save_load.c:1307: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1626:info:build ad_save_load.c:1312: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1627:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1628:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c admalloc.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1629:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c ad_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1630:info:build ad_load.c: In function ‘GB_login’:
1631:info:build ad_load.c:1380: warning: ignoring return value of ‘gb_scan_directory’, declared with attribute warn_unused_result
1632:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c admap.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1633:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adTest.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1634:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adtune.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1635:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adGene.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1636:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adtcp.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1637:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adhashtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1638:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adExperiment.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1639:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1640:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adseqcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1641:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adtables.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1642:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adRevCompl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1643:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adChangeKey.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1644:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adali.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1645:info:build adali.c: In function ‘GBT_create_sequence_data’:
1646:info:build adali.c:597: warning: ‘GBT_add_data’ is deprecated (declared at adali.c:568)
1647:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adcolumns.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1648:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adtree.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1649:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c adname.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1650:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c aditem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1651:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c arbdbpp.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1652:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBS -c ad_config.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1653:info:build ld   -arch x86_64  -r -o libARBDB.a adsort.o adlang1.o adstring.o admatch.o arbdb.o ad_core.o admath.o adoptimize.o adsystem.o adindex.o adperl.o adlink.o adsocket.o adcomm.o adhash.o adquery.o ad_save_load.o adcompr.o admalloc.o ad_load.o admap.o adTest.o adtune.o adGene.o adtcp.o adhashtools.o adExperiment.o adtools.o adseqcompr.o adtables.o adRevCompl.o adChangeKey.o adali.o adcolumns.o adtree.o adname.o aditem.o arbdbpp.o ad_config.o
1654:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
1655:info:build -------------------------------------------------------------------------------- Make everything in ARBDBPP
1656:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
1657:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adtsequence.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1658:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adt_edit.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1659:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adtali.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1660:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adextended.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1661:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adseq.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1662:info:build adseq.cxx: In member function ‘AD_ERR* AD_CONT::create(AD_SPECIES*, AD_ALI*)’:
1663:info:build adseq.cxx:1012: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1664:info:build adseq.cxx:1012: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1665:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adspecies.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1666:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c admain.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1667:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c adali.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1668:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDBPP -c liste.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1669:info:build ld   -arch x86_64  -r -o libARBDBPP.a adtsequence.o adt_edit.o adtali.o adextended.o adseq.o adspecies.o admain.o adali.o  liste.o
1670:info:build touch libARBDBPP.a
1671:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
1672:info:build -------------------------------------------------------------------------------- Make everything in ARBDB2
1673:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
1674:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adsort.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1675:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adlang1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1676:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adstring.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1677:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c admatch.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1678:info:build admatch.c: In function ‘GBS_string_eval’:
1679:info:build admatch.c:763: warning: ignoring return value of ‘gbs_build_replace_string’, declared with attribute warn_unused_result
1680:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c arbdb.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1681:info:build arbdb.c: In function ‘GB_copy_with_protection’:
1682:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1683:info:build arbdb.c:1469: warning: null argument where non-null required (argument 2)
1684:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c ad_core.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1685:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c admath.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1686:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adoptimize.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1687:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adsystem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1688:info:build adsystem.c: In function ‘gb_load_single_key_data’:
1689:info:build adsystem.c:141: warning: cast to pointer from integer of different size
1690:info:build adsystem.c:159: warning: cast to pointer from integer of different size
1691:info:build adsystem.c:160: warning: cast to pointer from integer of different size
1692:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adindex.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1693:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adperl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1694:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adlink.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1695:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adsocket.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1696:info:build adsocket.c:1160:2: warning: #warning memsize detection needs to be tested for Darwin
1697:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adcomm.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1698:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adhash.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1699:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adquery.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1700:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c ad_save_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1701:info:build ad_save_load.c: In function ‘gb_write_bin_rek’:
1702:info:build ad_save_load.c:799: warning: null argument where non-null required (argument 1)
1703:info:build ad_save_load.c: In function ‘GB_save_as’:
1704:info:build ad_save_load.c:1079: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1705:info:build ad_save_load.c: In function ‘GB_save_quick_as’:
1706:info:build ad_save_load.c:1126: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1707:info:build ad_save_load.c:1148: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1708:info:build ad_save_load.c:1173: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1709:info:build ad_save_load.c:1184: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1710:info:build ad_save_load.c: In function ‘GB_save_quick’:
1711:info:build ad_save_load.c:1213: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1712:info:build ad_save_load.c:1234: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1713:info:build ad_save_load.c:1267: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1714:info:build ad_save_load.c: In function ‘gb_check_saveable’:
1715:info:build ad_save_load.c:1307: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1716:info:build ad_save_load.c:1312: warning: ‘GB_get_error’ is deprecated (declared at ./ad_prot.h:43)
1717:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1718:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c admalloc.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1719:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c ad_load.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1720:info:build ad_load.c: In function ‘GB_login’:
1721:info:build ad_load.c:1380: warning: ignoring return value of ‘gb_scan_directory’, declared with attribute warn_unused_result
1722:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c admap.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1723:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adTest.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1724:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adtune.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1725:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adGene.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1726:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adtcp.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1727:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adhashtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1728:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adExperiment.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1729:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adtools.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1730:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adseqcompr.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1731:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adtables.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1732:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adRevCompl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1733:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adChangeKey.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1734:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adali.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1735:info:build adali.c: In function ‘GBT_create_sequence_data’:
1736:info:build adali.c:597: warning: ‘GBT_add_data’ is deprecated (declared at adali.c:568)
1737:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adcolumns.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1738:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adtree.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1739:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c adname.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1740:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c aditem.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1741:info:build /usr/bin/llvm-gcc-4.2  -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARBDB2 -c ad_config.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1742:info:build ld   -arch x86_64  -r -o libARBDB.a adsort.o adlang1.o adstring.o admatch.o arbdb.o ad_core.o admath.o adoptimize.o adsystem.o adindex.o adperl.o adlink.o adsocket.o adcomm.o adhash.o adquery.o ad_save_load.o adcompr.o admalloc.o ad_load.o admap.o adTest.o adtune.o adGene.o adtcp.o adhashtools.o adExperiment.o adtools.o adseqcompr.o adtables.o adRevCompl.o adChangeKey.o adali.o adcolumns.o adtree.o adname.o aditem.o ad_config.o
1743:info:build touch libARBDB.a
1744:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
1745:info:build -------------------------------------------------------------------------------- Make everything in WINDOW
1746:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
1747:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_position.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1748:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_Xm.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1749:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_at.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1750:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_button.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1751:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_click.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1752:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_debug.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1753:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_device.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1754:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_font_group.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1755:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_global_awars.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1756:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_nawar.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1757:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_preset.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1758:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_print.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1759:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_question.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1760:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_size.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1761:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_status.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1762:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_window.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1763:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_xfig.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1764:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_xfigfont.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1765:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_xfont.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1766:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_xkey.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1767:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WINDOW -c AW_window_Xm_interface.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1768:info:build ld   -arch x86_64  -r -o libAW.a AW_position.o AW_Xm.o AW_at.o AW_button.o AW_click.o AW_debug.o AW_device.o AW_font_group.o AW_global_awars.o AW_nawar.o AW_preset.o AW_print.o AW_question.o AW_size.o AW_status.o AW_window.o AW_xfig.o AW_xfigfont.o AW_xfont.o AW_xkey.o AW_window_Xm_interface.o
1769:info:build touch libAW.a
1770:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
1771:info:build /usr/bin/make -C bin all
1772:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
1773:info:build find . -type l -exec rm {} \;
1774:info:build ln -s -f `find ../SH ../PERL_SCRIPTS -perm -100 ! -type d ! -name 'config*' -print` .
1775:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
1776:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
1777:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1778:info:build make[3]: Nothing to be done for `dummy.a'.
1779:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1780:info:build -------------------------------------------------------------------------------- Make everything in AISC
1781:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1782:info:build make[3]: Nothing to be done for `dummy.a'.
1783:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
1784:info:build -------------------------------------------------------------------------------- Building prototyper
1785:info:build /usr/bin/make AISC_MKPTPS/AISC_MKPTPS.dummy
1786:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1787:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
1788:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1789:info:build make[4]: Nothing to be done for `AISC_MKPTPS.a'.
1790:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
1791:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
1792:info:build -------------------------------------------------------------------------------- Make everything in AWTI
1793:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWTI'
1794:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTI -c AWTI_import.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1795:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTI -c AWTI_export.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1796:info:build ld   -arch x86_64  -r -o AWTI.a AWTI_import.o AWTI_export.o
1797:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWTI'
1798:info:build -------------------------------------------------------------------------------- Make everything in GENOM
1799:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GENOM'
1800:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_interface.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1801:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_map.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1802:info:build GEN_map.cxx: In function ‘void gen_extract_gene_2_pseudoSpecies(GBDATA*, GBDATA*, EG2PS_data*)’:
1803:info:build GEN_map.cxx:882: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1804:info:build GEN_map.cxx:882: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1805:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_graphic.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1806:info:build GEN_graphic.cxx:158: warning: unused parameter ‘selected_range’
1807:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_gene.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1808:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_nds.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1809:info:build GEN_nds.cxx:307:2: warning: #warning make this function more general like AWT_popup_select_species_field_window
1810:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_color_groups.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1811:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c GEN_translations.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1812:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c EXP_interface.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1813:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM -c EXP_main.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1814:info:build ld   -arch x86_64  -r -o GENOM.a GEN_interface.o GEN_map.o GEN_graphic.o GEN_gene.o GEN_nds.o GEN_color_groups.o GEN_translations.o EXP_interface.o EXP_main.o
1815:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GENOM'
1816:info:build -------------------------------------------------------------------------------- Make everything in GENOM_IMPORT
1817:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GENOM_IMPORT'
1818:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c GenomeImport.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1819:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c Importer.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1820:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c DBwriter.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1821:info:build DBwriter.cxx: In member function ‘void DBwriter::writeSequence(const SequenceBuffer&)’:
1822:info:build DBwriter.cxx:226: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1823:info:build DBwriter.cxx:226: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1824:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c SequenceBuffer.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1825:info:build SequenceBuffer.cxx: In member function ‘void BaseCounter::checkOverallCounter() const’:
1826:info:build SequenceBuffer.cxx:55: warning: format ‘%u’ expects type ‘unsigned int’, but argument 2 has type ‘long unsigned int’
1827:info:build SequenceBuffer.cxx:55: warning: format ‘%u’ expects type ‘unsigned int’, but argument 3 has type ‘size_t’
1828:info:build SequenceBuffer.cxx: In member function ‘void BaseCounter::expectEqual(const BaseCounter&) const’:
1829:info:build SequenceBuffer.cxx:116: warning: format ‘%u’ expects type ‘unsigned int’, but argument 2 has type ‘long unsigned int’
1830:info:build SequenceBuffer.cxx:116: warning: format ‘%u’ expects type ‘unsigned int’, but argument 3 has type ‘long unsigned int’
1831:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c MetaInfo.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1832:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c Feature.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1833:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c Location.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1834:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GENOM_IMPORT -c tools.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1835:info:build -------------------- Checking GENOM_IMPORT.a
1836:info:build Target 'GENOM_IMPORT.a' not found
1837:info:build -> rebuilding GENOM_IMPORT.a (Wed Dec 31 15:59:59 1969)
1838:info:build ld   -arch x86_64  -r -o GENOM_IMPORT.a GenomeImport.o Importer.o DBwriter.o SequenceBuffer.o MetaInfo.o Feature.o Location.o tools.o
1839:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GENOM_IMPORT'
1840:info:build -------------------------------------------------------------------------------- Make everything in AWT
1841:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
1842:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_input_mask.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1843:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_hotkeys.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1844:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_www.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1845:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_tables.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1846:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_irstree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1847:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_asciiprint.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1848:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_map_key.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1849:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_tree_cmp.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1850:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_seq_colors.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1851:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_pro_a_nucs.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1852:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_csp.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1853:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_canvas.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1854:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_dtree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1855:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_tree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1856:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_tree_cb.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1857:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_nei.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1858:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_filter.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1859:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_sel_boxes.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1860:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_canio.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1861:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_nds.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1862:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_query_and_functions.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1863:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_file_selection.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1864:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_preset.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1865:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_seq_dna.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1866:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_seq_protein.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1867:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_seq_simple_pro.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1868:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_codon_table.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1869:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_iupac.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1870:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_config_manager.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1871:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_advice.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1872:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_db_browser.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1873:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_attributes.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1874:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_changekey.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1875:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_item_sel_list.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1876:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_macro.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1877:info:build /usr/bin/llvm-g++-4.2   -fPIC -fno-common -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWT -c AWT_translate.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1878:info:build ld   -arch x86_64  -r -o libAWT.a AWT_input_mask.o AWT_hotkeys.o AWT_www.o AWT_tables.o AWT_irstree.o AWT_asciiprint.o AWT_map_key.o AWT_tree_cmp.o AWT_seq_colors.o AWT_pro_a_nucs.o AWT_csp.o AWT_canvas.o AWT_dtree.o AWT_tree.o AWT_tree_cb.o AWT_nei.o AWT_filter.o AWT_sel_boxes.o AWT_canio.o AWT_nds.o AWT_query_and_functions.o AWT_file_selection.o AWT_preset.o AWT_seq_dna.o AWT_seq_protein.o AWT_seq_simple_pro.o AWT_codon_table.o AWT_iupac.o AWT_config_manager.o AWT_advice.o AWT_db_browser.o AWT_attributes.o AWT_changekey.o AWT_item_sel_list.o AWT_macro.o AWT_translate.o
1879:info:build touch libAWT.a
1880:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
1881:info:build -------------------------------------------------------------------------------- Make everything in MERGE
1882:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/MERGE'
1883:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_checkfield.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1884:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1885:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_trees.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1886:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_alignment.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1887:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_species.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1888:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_extendeds.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1889:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_names.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1890:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_gene_species.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1891:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_configs.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1892:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MERGE -c MG_preserves.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1893:info:build ld   -arch x86_64  -r -o MERGE.a MG_checkfield.o MG_main.o MG_trees.o MG_alignment.o MG_species.o MG_extendeds.o MG_names.o MG_gene_species.o MG_configs.o MG_preserves.o
1894:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/MERGE'
1895:info:build -------------------------------------------------------------------------------- Make everything in PRIMER_DESIGN
1896:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PRIMER_DESIGN'
1897:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_Pair.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1898:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_Item.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1899:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_Node.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1900:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_Range.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1901:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_SequenceIterator.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1902:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_SearchFIFO.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1903:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c PRD_Design.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1904:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PRIMER_DESIGN -c primer_design.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1905:info:build ld   -arch x86_64  -r -o PRIMER_DESIGN.a PRD_Pair.o PRD_Item.o PRD_Node.o PRD_Range.o PRD_SequenceIterator.o PRD_SearchFIFO.o PRD_Design.o primer_design.o
1906:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PRIMER_DESIGN'
1907:info:build -------------------------------------------------------------------------------- Make everything in SEQ_QUALITY
1908:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SEQ_QUALITY'
1909:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SEQ_QUALITY -c SQ_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1910:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SEQ_QUALITY -c SQ_functions.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1911:info:build SQ_functions.cxx: In function ‘const char* SQ_reset_quality_calcstate(GBDATA*)’:
1912:info:build SQ_functions.cxx:82: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1913:info:build SQ_functions.cxx:82: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1914:info:build SQ_functions.cxx:92: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1915:info:build SQ_functions.cxx:92: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1916:info:build SQ_functions.cxx: In function ‘const char* SQ_evaluate(GBDATA*, const SQ_weights&, bool)’:
1917:info:build SQ_functions.cxx:239: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1918:info:build SQ_functions.cxx:239: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1919:info:build SQ_functions.cxx: In function ‘const char* SQ_pass1(SQ_GroupData*, GBDATA*, GBT_TREE*, AP_filter*)’:
1920:info:build SQ_functions.cxx:450: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1921:info:build SQ_functions.cxx:450: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1922:info:build SQ_functions.cxx:461: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1923:info:build SQ_functions.cxx:461: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1924:info:build SQ_functions.cxx:469: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1925:info:build SQ_functions.cxx:469: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1926:info:build SQ_functions.cxx: In function ‘const char* SQ_pass1_no_tree(SQ_GroupData*, GBDATA*, AP_filter*)’:
1927:info:build SQ_functions.cxx:554: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1928:info:build SQ_functions.cxx:554: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1929:info:build SQ_functions.cxx:564: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1930:info:build SQ_functions.cxx:564: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1931:info:build SQ_functions.cxx:572: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1932:info:build SQ_functions.cxx:572: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1933:info:build SQ_functions.cxx: In function ‘const char* SQ_pass2(const SQ_GroupData*, GBDATA*, GBT_TREE*, AP_filter*)’:
1934:info:build SQ_functions.cxx:649: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1935:info:build SQ_functions.cxx:649: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1936:info:build SQ_functions.cxx:659: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1937:info:build SQ_functions.cxx:659: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1938:info:build SQ_functions.cxx:664: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1939:info:build SQ_functions.cxx:664: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1940:info:build SQ_functions.cxx:733: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1941:info:build SQ_functions.cxx:733: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1942:info:build SQ_functions.cxx:737: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1943:info:build SQ_functions.cxx:737: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1944:info:build SQ_functions.cxx: In function ‘const char* SQ_pass2_no_tree(const SQ_GroupData*, GBDATA*, AP_filter*)’:
1945:info:build SQ_functions.cxx:889: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1946:info:build SQ_functions.cxx:889: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1947:info:build SQ_functions.cxx:898: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1948:info:build SQ_functions.cxx:898: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1949:info:build SQ_functions.cxx:903: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1950:info:build SQ_functions.cxx:903: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1951:info:build SQ_functions.cxx:972: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1952:info:build SQ_functions.cxx:972: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1953:info:build SQ_functions.cxx:976: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1954:info:build SQ_functions.cxx:976: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1955:info:build SQ_functions.cxx: In function ‘const char* SQ_count_nr_of_species(GBDATA*)’:
1956:info:build SQ_functions.cxx:1120: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1957:info:build SQ_functions.cxx:1120: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1958:info:build SQ_functions.cxx:1130: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1959:info:build SQ_functions.cxx:1130: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
1960:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SEQ_QUALITY -c SQ_GroupData.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1961:info:build ld   -arch x86_64  -r -o SEQ_QUALITY.a SQ_main.o SQ_functions.o SQ_GroupData.o
1962:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SEQ_QUALITY'
1963:info:build -------------------------------------------------------------------------------- Make everything in SERVERCNTRL
1964:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
1965:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SERVERCNTRL -c servercntrl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1966:info:build ld   -arch x86_64  -r -o SERVERCNTRL.a servercntrl.o
1967:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
1968:info:build -------------------------------------------------------------------------------- Make everything in SL/DB_SCANNER
1969:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
1970:info:build make[3]: `DB_SCANNER.a' is up to date.
1971:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
1972:info:build -------------------------------------------------------------------------------- Make everything in SL/FILE_BUFFER
1973:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
1974:info:build make[3]: `FILE_BUFFER.a' is up to date.
1975:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
1976:info:build -------------------------------------------------------------------------------- Make everything in SL/HELIX
1977:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
1978:info:build make[3]: `HELIX.a' is up to date.
1979:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
1980:info:build -------------------------------------------------------------------------------- Make everything in SL/REGEXPR
1981:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
1982:info:build make[3]: `REGEXPR.a' is up to date.
1983:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
1984:info:build -------------------------------------------------------------------------------- Make everything in SL/TREE_READ
1985:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
1986:info:build make[3]: `TREE_READ.a' is up to date.
1987:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
1988:info:build -------------------------------------------------------------------------------- Make everything in SL/TREE_WRITE
1989:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
1990:info:build make[3]: `TREE_WRITE.a' is up to date.
1991:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
1992:info:build -------------------------------------------------------------------------------- Make everything in STAT
1993:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/STAT'
1994:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_STAT -c ST_quality.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1995:info:build ST_quality.cxx: In function ‘void st_ml_add_quality_string_to_species(GBDATA*, const char*, const char*, int, int, GB_HASH*, st_report_enum, const char*)’:
1996:info:build ST_quality.cxx:168: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1997:info:build ST_quality.cxx:168: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
1998:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_STAT -c ST_ml.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
1999:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_STAT -c ST_window.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2000:info:build ld   -arch x86_64  -r -o STAT.a ST_quality.o ST_ml.o ST_window.o
2001:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/STAT'
2002:info:build -------------------------------------------------------------------------------- Make everything in XML
2003:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/XML'
2004:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_XML -c xml.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2005:info:build xml.cxx:40: warning: unused parameter ‘quotedText’
2006:info:build ld   -arch x86_64  -r -o XML.a xml.o
2007:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/XML'
2008:info:build -------------------------------------------------------------------------------- Make everything in NTREE
2009:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NTREE'
2010:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c AP_consensus.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2011:info:build AP_consensus.cxx: In function ‘const char* CON_export(char*, char*, int**, char*, int*, char*, int, long int, long int, int, int, int, double, double, int, int)’:
2012:info:build AP_consensus.cxx:409: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2013:info:build AP_consensus.cxx:409: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2014:info:build AP_consensus.cxx:411: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2015:info:build AP_consensus.cxx:411: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2016:info:build AP_consensus.cxx:465: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2017:info:build AP_consensus.cxx:465: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2018:info:build AP_consensus.cxx: In function ‘void CON_calc_max_freq_cb(AW_window*)’:
2019:info:build AP_consensus.cxx:962: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2020:info:build AP_consensus.cxx:962: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2021:info:build AP_consensus.cxx:963: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2022:info:build AP_consensus.cxx:963: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2023:info:build AP_consensus.cxx:966: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2024:info:build AP_consensus.cxx:966: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2025:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c AP_conservProfile2Gnuplot.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2026:info:build AP_conservProfile2Gnuplot.cxx: In function ‘void AP_conservProfile2Gnuplot_callback(AW_window*)’:
2027:info:build AP_conservProfile2Gnuplot.cxx:58: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2028:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c AP_cprofile.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2029:info:build AP_cprofile.cxx: In function ‘void CPRO_condense_cb(AW_window*, AW_CL)’:
2030:info:build AP_cprofile.cxx:1420: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2031:info:build AP_cprofile.cxx:1420: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2032:info:build AP_cprofile.cxx:1423: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2033:info:build AP_cprofile.cxx:1423: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2034:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c AP_csp_2_gnuplot.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2035:info:build AP_csp_2_gnuplot.cxx: In function ‘char* get_overlay_files(AW_root*, const char*, const char*&)’:
2036:info:build AP_csp_2_gnuplot.cxx:92: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
2037:info:build AP_csp_2_gnuplot.cxx:92: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
2038:info:build AP_csp_2_gnuplot.cxx:100: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
2039:info:build AP_csp_2_gnuplot.cxx:100: warning: ‘GB_get_error’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_prot.h:43)
2040:info:build AP_csp_2_gnuplot.cxx: In function ‘void AP_csp_2_gnuplot_cb(AW_window*, AW_CL, AW_CL)’:
2041:info:build AP_csp_2_gnuplot.cxx:388: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2042:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c AP_pos_var_pars.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2043:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_cb.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2044:info:build NT_cb.cxx: In function ‘void NT_system_cb2(AW_window*, AW_CL, AW_CL)’:
2045:info:build NT_cb.cxx:128: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2046:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_concatenate.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2047:info:build NT_concatenate.cxx: In function ‘const char* displayAlignmentInfo(GBDATA*, const char*, char*, char*)’:
2048:info:build NT_concatenate.cxx:310: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2049:info:build NT_concatenate.cxx:310: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2050:info:build NT_concatenate.cxx: In function ‘void concatenateAlignments(AW_window*)’:
2051:info:build NT_concatenate.cxx:415: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2052:info:build NT_concatenate.cxx:415: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2053:info:build NT_concatenate.cxx: In function ‘GBDATA* concatenateFieldsCreateNewSpecies(AW_window*, GBDATA*, SPECIES_ConcatenateList*)’:
2054:info:build NT_concatenate.cxx:664: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2055:info:build NT_concatenate.cxx:664: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2056:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_dbrepair.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2057:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_edconf.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2058:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_extern.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2059:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_import.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2060:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_ins_col.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2061:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_join.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2062:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_main.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2063:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_sort.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2064:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_trackAliChanges.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2065:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_validManual.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2066:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_validNameParser.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2067:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c NT_validNames.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2068:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c ad_ali.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2069:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c ad_ext.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2070:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c ad_spec.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2071:info:build ad_spec.cxx: In function ‘void ad_field_convert_commit_cb(AW_window*, AW_CL)’:
2072:info:build ad_spec.cxx:729: warning: unused variable ‘selector’
2073:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c ad_transpro.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2074:info:build ad_transpro.cxx: In function ‘const char* arb_r2a(GBDATA*, bool, bool, int, bool, const char*, const char*)’:
2075:info:build ad_transpro.cxx:159: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2076:info:build ad_transpro.cxx:159: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2077:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NTREE -c ad_trees.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2078:info:build ad_trees.cxx: In function ‘char* readXmlTree(char*)’:
2079:info:build ad_trees.cxx:418: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2080:info:build ad_trees.cxx:422: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2081:info:build -------------------- Checking NTREE.a
2082:info:build Target 'NTREE.a' not found
2083:info:build -> rebuilding NTREE.a (Wed Dec 31 15:59:59 1969)
2084:info:build ld   -arch x86_64  -r -o NTREE.a AP_consensus.o AP_conservProfile2Gnuplot.o AP_cprofile.o AP_csp_2_gnuplot.o AP_pos_var_pars.o NT_cb.o NT_concatenate.o NT_dbrepair.o NT_edconf.o NT_extern.o NT_import.o NT_ins_col.o NT_join.o NT_main.o NT_sort.o NT_trackAliChanges.o NT_validManual.o NT_validNameParser.o NT_validNames.o ad_ali.o ad_ext.o ad_spec.o ad_transpro.o ad_trees.o
2085:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NTREE'
2086:info:build -------------------------------------------------------------------------------- Make everything in EDIT
2087:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EDIT'
2088:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT -c edit.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2089:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT -c edit_naligner.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2090:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT -c edit_tools.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2091:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT -c ed_conf.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2092:info:build ld   -arch x86_64  -r -o EDIT.a edit.o edit_naligner.o edit_tools.o ed_conf.o
2093:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EDIT'
2094:info:build -------------------------------------------------------------------------------- Make everything in SL/AW_HELIX
2095:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
2096:info:build make[3]: `AW_HELIX.a' is up to date.
2097:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
2098:info:build -------------------------------------------------------------------------------- Make everything in WETC
2099:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WETC'
2100:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_WETC -c -o WETC_main.o WETC_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2101:info:build ld   -arch x86_64  -r -o WETC.a WETC_main.o
2102:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WETC'
2103:info:build -------------------------------------------------------------------------------- Make everything in PARSIMONY
2104:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PARSIMONY'
2105:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c PARS_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2106:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c PARS_dtree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2107:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c PARS_debug.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2108:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c PARS_klprops.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2109:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c AP_buffer.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2110:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c AP_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2111:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c AP_tree_nlen.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2112:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PARSIMONY -c AP_tree_edge.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2113:info:build ld   -arch x86_64  -r -o PARSIMONY.a PARS_main.o PARS_dtree.o PARS_debug.o PARS_klprops.o AP_buffer.o AP_main.o AP_tree_nlen.o AP_tree_edge.o
2114:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PARSIMONY'
2115:info:build -------------------------------------------------------------------------------- Make everything in READSEQ
2116:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/READSEQ'
2117:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_READSEQ -c readseq.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2118:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_READSEQ -c ureadseq.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2119:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_READSEQ -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_readseq readseq.o ureadseq.o
2120:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/READSEQ'
2121:info:build -------------------------------------------------------------------------------- Make everything in SECEDIT
2122:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SECEDIT'
2123:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_toggle.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2124:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_bonddef.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2125:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_db.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2126:info:build SEC_db.cxx:328:2: warning: #warning @@@reread alilen
2127:info:build SEC_db.cxx:329:2: warning: #warning test changing ali length!
2128:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_helix.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2129:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_graphic.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2130:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_structure.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2131:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_read.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2132:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_io.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2133:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_paint.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2134:info:build SEC_paint.cxx:368:2: warning: #warning move to SEC_db_interface
2135:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_layout.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2136:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_split.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2137:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_abspos.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2138:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_SECEDIT -c SEC_main.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2139:info:build SEC_main.cxx:88:2: warning: #warning make the refresh invisible
2140:info:build SEC_main.cxx:702: warning: unused parameter ‘gb_main’
2141:info:build ld   -arch x86_64  -r -o SECEDIT.a SEC_toggle.o SEC_bonddef.o SEC_db.o SEC_helix.o SEC_graphic.o SEC_structure.o SEC_read.o SEC_io.o SEC_paint.o SEC_layout.o SEC_split.o SEC_abspos.o SEC_main.o
2142:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SECEDIT'
2143:info:build -------------------------------------------------------------------------------- Make everything in ISLAND_HOPPING
2144:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ISLAND_HOPPING'
2145:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ISLAND_HOPPING -c island_hopping.cpp  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2146:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ISLAND_HOPPING -DARB -c i-hopper.c  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2147:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ISLAND_HOPPING -DARB -c align.c  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2148:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ISLAND_HOPPING -DARB -c memory.c  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2149:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ISLAND_HOPPING -DARB -c trnsprob.c  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2150:info:build ld   -arch x86_64  -r -o ISLAND_HOPPING.a island_hopping.o i-hopper.o align.o memory.o trnsprob.o
2151:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ISLAND_HOPPING'
2152:info:build -------------------------------------------------------------------------------- Make everything in SL/FAST_ALIGNER
2153:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
2154:info:build make[3]: `FAST_ALIGNER.a' is up to date.
2155:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
2156:info:build -------------------------------------------------------------------------------- Make everything in DIST
2157:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/DIST'
2158:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_mldist.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2159:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_protdist.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2160:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_compress_matrix.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2161:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_view_matrix.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2162:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_save_matr.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2163:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2164:info:build DI_main.cxx: In function ‘int main(int, char**)’:
2165:info:build DI_main.cxx:71: warning: ignoring return value of ‘const char* ARB_init_global_awars(AW_root*, GBDATA*, GBDATA*)’, declared with attribute warn_unused_result
2166:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c DI_matr.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2167:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DIST -c distanalyse.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2168:info:build ld   -arch x86_64  -r -o DIST.a DI_mldist.o DI_protdist.o DI_compress_matrix.o DI_view_matrix.o DI_save_matr.o DI_main.o DI_matr.o distanalyse.o
2169:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/DIST'
2170:info:build -------------------------------------------------------------------------------- Make everything in CONSENSUS_TREE
2171:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/CONSENSUS_TREE'
2172:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_part.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2173:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_hash.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2174:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_ntree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2175:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_rbtree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2176:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_dtree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2177:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_ctree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2178:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONSENSUS_TREE -c CT_mem.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2179:info:build ld   -arch x86_64  -r -o CONSENSUS_TREE.a CT_part.o CT_hash.o CT_ntree.o CT_rbtree.o CT_dtree.o CT_ctree.o CT_mem.o
2180:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/CONSENSUS_TREE'
2181:info:build -------------------------------------------------------------------------------- Make everything in EDIT4
2182:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EDIT4'
2183:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_protein_2nd_structure.o ED4_protein_2nd_structure.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2184:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_ProteinViewer.o ED4_ProteinViewer.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2185:info:build ED4_ProteinViewer.cxx: In function ‘void PV_WriteTranslatedSequenceToDB(ED4_AA_sequence_terminal*, char*)’:
2186:info:build ED4_ProteinViewer.cxx:498: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2187:info:build ED4_ProteinViewer.cxx:498: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2188:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_search.o ED4_search.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2189:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_cursor.o ED4_cursor.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2190:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_dump.o ED4_dump.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2191:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_nds.o ED4_nds.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2192:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_secedit.o ED4_secedit.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2193:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_RNA3D.o ED4_RNA3D.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2194:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_main.o ED4_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2195:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_mini_classes.o ED4_mini_classes.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2196:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_edit_string.o ED4_edit_string.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2197:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_base.o ED4_base.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2198:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_manager.o ED4_manager.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2199:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_terminal.o ED4_terminal.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2200:info:build ED4_terminal.cxx:164:2: warning: #warning temporary workaround - gb_type GB_INT and GB_FLOAT in the switch directive must not be displayed but ignored
2201:info:build ED4_terminal.cxx:1422:2: warning: #warning test drawing of ED4_columnStat_terminal
2202:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_root.o ED4_root.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2203:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o EDB_root_bact.o EDB_root_bact.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2204:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_window.o ED4_window.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2205:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_members.o ED4_members.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2206:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_no_class.o ED4_no_class.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2207:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_list.o ED4_list.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2208:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_text_terminals.o ED4_text_terminals.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2209:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_tools.o ED4_tools.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2210:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_block.o ED4_block.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2211:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_visualizeSAI.o ED4_visualizeSAI.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2212:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o edit_naligner.o edit_naligner.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2213:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o graph_aligner_gui.o graph_aligner_gui.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2214:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EDIT4 -c -o ED4_dots.o ED4_dots.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2215:info:build ld   -arch x86_64  -r -o EDIT4.a ED4_protein_2nd_structure.o ED4_ProteinViewer.o ED4_search.o ED4_cursor.o ED4_dump.o ED4_nds.o ED4_secedit.o ED4_RNA3D.o ED4_main.o ED4_mini_classes.o ED4_edit_string.o ED4_base.o ED4_manager.o ED4_terminal.o ED4_root.o EDB_root_bact.o ED4_window.o ED4_members.o ED4_no_class.o ED4_list.o ED4_text_terminals.o ED4_tools.o ED4_block.o ED4_visualizeSAI.o edit_naligner.o graph_aligner_gui.o ED4_dots.o
2216:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EDIT4'
2217:info:build -------------------------------------------------------------------------------- Make everything in EISPACK
2218:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EISPACK'
2219:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EISPACK -c eispack.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2220:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_EISPACK -c d_sign.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2221:info:build ld   -arch x86_64  -r -o EISPACK.a eispack.o d_sign.o
2222:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/EISPACK'
2223:info:build -------------------------------------------------------------------------------- Make everything in DBSERVER
2224:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/DBSERVER'
2225:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_DBSERVER -c db_server.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2226:info:build ld   -arch x86_64  -r -o DBSERVER.a db_server.o
2227:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/DBSERVER'
2228:info:build -------------------------------------------------------------------------------- Make everything in PHYLO
2229:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PHYLO'
2230:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_data.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2231:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_root.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2232:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2233:info:build PH_main.cxx: In function ‘const char* PH_create_ml_multiline_SAI(const char*, int, GBDATA**)’:
2234:info:build PH_main.cxx:157: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2235:info:build PH_main.cxx:157: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2236:info:build PH_main.cxx:162: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2237:info:build PH_main.cxx:162: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2238:info:build PH_main.cxx: In function ‘void PH_save_ml_cb(AW_window*)’:
2239:info:build PH_main.cxx:330: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2240:info:build PH_main.cxx:330: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2241:info:build PH_main.cxx:335: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2242:info:build PH_main.cxx:335: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2243:info:build PH_main.cxx: In function ‘int main(int, char**)’:
2244:info:build PH_main.cxx:576: warning: ignoring return value of ‘const char* ARB_init_global_awars(AW_root*, GBDATA*, GBDATA*)’, declared with attribute warn_unused_result
2245:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_filt.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2246:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_display.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2247:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PHYLO -c PH_matr.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2248:info:build PH_matr.cxx:9:2: warning: #warning module completely unused
2249:info:build ld   -arch x86_64  -r -o PHYLO.a PH_data.o PH_root.o PH_main.o PH_filt.o PH_display.o PH_matr.o
2250:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PHYLO'
2251:info:build -------------------------------------------------------------------------------- Make everything in GDEHELP
2252:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP'
2253:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/align.menu > MENUS/align.genmenu
2254:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/desoete.menu > MENUS/desoete.genmenu
2255:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/dnamlrates.menu > MENUS/dnamlrates.genmenu
2256:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/export.menu > MENUS/export.genmenu
2257:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/fastdnaml.menu > MENUS/fastdnaml.genmenu
2258:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/import.menu > MENUS/import.genmenu
2259:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/inc_fastdnaml.menu > MENUS/inc_fastdnaml.genmenu
2260:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/phylip_dist.menu > MENUS/phylip_dist.genmenu
2261:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/phylip_dist_org.menu > MENUS/phylip_dist_org.genmenu
2262:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/phylip_help.menu > MENUS/phylip_help.genmenu
2263:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/phylip_ml.menu > MENUS/phylip_ml.genmenu
2264:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/phylip_pars.menu > MENUS/phylip_pars.genmenu
2265:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/pretty_print.menu > MENUS/pretty_print.genmenu
2266:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/puzzle.menu > MENUS/puzzle.genmenu
2267:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/raxml.menu > MENUS/raxml.genmenu
2268:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/start_arb.menu > MENUS/start_arb.genmenu
2269:info:build ( cat genmenu.header; gsed -e "s/^[ ]*//" ) < MENUS/warning.menu > MENUS/warning.genmenu
2270:info:build chmod a+w ARB_GDEmenus
2271:info:build chmod: ARB_GDEmenus: No such file or directory
2272:info:build make[3]: [ARB_GDEmenus] Error 1 (ignored)
2273:info:build /usr/bin/llvm-gcc-4.2 -E -x c-header -IMENUS ARB_GDEmenus.source >ARB_GDEmenus
2274:info:build chmod a-w ARB_GDEmenus
2275:info:build grep -i '^itemhelp:' < ARB_GDEmenus | gsed -e 's/^itemhelp://' | sort | uniq > helpfiles.lst
2276:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP'
2277:info:build ----------------------------------------------------------------
2278:info:build Collecting documentation for external programs used in GDE menus
2279:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/proml.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/proml.doc
2280:info:build test -s HELP_DOC_GEN/proml.doc || (echo HELP_DOC_GEN/proml.doc not generated or empty && rm HELP_DOC_GEN/proml.doc && false)
2281:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/dnapars.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/dnapars.doc
2282:info:build test -s HELP_DOC_GEN/dnapars.doc || (echo HELP_DOC_GEN/dnapars.doc not generated or empty && rm HELP_DOC_GEN/dnapars.doc && false)
2283:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/protpars.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/protpars.doc
2284:info:build test -s HELP_DOC_GEN/protpars.doc || (echo HELP_DOC_GEN/protpars.doc not generated or empty && rm HELP_DOC_GEN/protpars.doc && false)
2285:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYML/usersguide_phyliplike.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/phyml.doc
2286:info:build test -s HELP_DOC_GEN/phyml.doc || (echo HELP_DOC_GEN/phyml.doc not generated or empty && rm HELP_DOC_GEN/phyml.doc && false)
2287:info:build ./genhelp.sh HELP_GEN/CAP2.help "CAP2" arb_help.head HELP_PLAIN/CAP2.help
2288:info:build ./genhelp.sh HELP_GEN/DNAml_rates.help "DNAml_rates" arb_help.head HELP_PLAIN/DNAml_rates.help
2289:info:build ./genhelptree.sh HELP_GEN/clustalw.help "clustalw" arb_help.head ../GDE/CLUSTALW/clustalw_help ../GDE/CLUSTALW/clustalw.doc
2290:info:build BASE='clustalw' PREFIX='HELP_GEN'
2291:info:build ./genhelptree.sh HELP_GEN/dnaml.help "dnaml" arb_help.head ../GDE/AxML/AxML.doc ../GDE/FASTDNAML/fastDNAml.doc
2292:info:build BASE='dnaml' PREFIX='HELP_GEN'
2293:info:build ./genhelp.sh HELP_GEN/dnapars.help "dnapars" arb_help.head HELP_DOC_GEN/dnapars.doc
2294:info:build ./genhelp.sh HELP_GEN/lsadt.help "lsadt" arb_help.head HELP_PLAIN/lsadt.help
2295:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/fitch.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/fitch.doc
2296:info:build test -s HELP_DOC_GEN/fitch.doc || (echo HELP_DOC_GEN/fitch.doc not generated or empty && rm HELP_DOC_GEN/fitch.doc && false)
2297:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/kitsch.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/kitsch.doc
2298:info:build test -s HELP_DOC_GEN/kitsch.doc || (echo HELP_DOC_GEN/kitsch.doc not generated or empty && rm HELP_DOC_GEN/kitsch.doc && false)
2299:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/neighbor.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/neighbor.doc
2300:info:build test -s HELP_DOC_GEN/neighbor.doc || (echo HELP_DOC_GEN/neighbor.doc not generated or empty && rm HELP_DOC_GEN/neighbor.doc && false)
2301:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/dnadist.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/dnadist.doc
2302:info:build test -s HELP_DOC_GEN/dnadist.doc || (echo HELP_DOC_GEN/dnadist.doc not generated or empty && rm HELP_DOC_GEN/dnadist.doc && false)
2303:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/PHYLIP/doc/protdist.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/protdist.doc
2304:info:build test -s HELP_DOC_GEN/protdist.doc || (echo HELP_DOC_GEN/protdist.doc not generated or empty && rm HELP_DOC_GEN/protdist.doc && false)
2305:info:build ./genhelp.sh HELP_GEN/phyml.help "phyml" arb_help.head HELP_DOC_GEN/phyml.doc
2306:info:build ./genhelp.sh HELP_GEN/proml.help "proml" arb_help.head HELP_DOC_GEN/proml.doc
2307:info:build ./genhelp.sh HELP_GEN/protpars.help "protpars" arb_help.head HELP_DOC_GEN/protpars.doc
2308:info:build ./genhelptree.sh HELP_GEN/readseq.help "readseq" arb_help.head ../READSEQ/Readme ../READSEQ/Formats ../READSEQ/Readseq.help
2309:info:build BASE='readseq' PREFIX='HELP_GEN'
2310:info:build lynx -dump -nolist -display_charset=iso-8859-1 ../GDE/TREEPUZZLE/doc/manual.html | gsed -e 's/©/(C)/' > HELP_DOC_GEN/treepuzzle.doc
2311:info:build test -s HELP_DOC_GEN/treepuzzle.doc || (echo HELP_DOC_GEN/treepuzzle.doc not generated or empty && rm HELP_DOC_GEN/treepuzzle.doc && false)
2312:info:build ./genhelptree.sh HELP_GEN/phylip_distance.help "phylip_distance" arb_help.head HELP_DOC_GEN/fitch.doc HELP_DOC_GEN/kitsch.doc HELP_DOC_GEN/neighbor.doc HELP_DOC_GEN/dnadist.doc HELP_DOC_GEN/protdist.doc
2313:info:build BASE='phylip_distance' PREFIX='HELP_GEN'
2314:info:build ./genhelp.sh HELP_GEN/treepuzzle.help "treepuzzle" arb_help.head HELP_DOC_GEN/treepuzzle.doc
2315:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP'
2316:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDEHELP'
2317:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
2318:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2319:info:build make[3]: `server.a' is up to date.
2320:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2321:info:build -------------------------------------------------------------------------------- Make everything in ARB_GDE
2322:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARB_GDE'
2323:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_ParseMenu.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2324:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2325:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_event.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2326:info:build GDE_event.cxx: In function ‘void GDE_export(NA_Alignment*, char*, long int)’:
2327:info:build GDE_event.cxx:305: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2328:info:build GDE_event.cxx:305: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2329:info:build GDE_event.cxx:369: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2330:info:build GDE_event.cxx:369: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2331:info:build GDE_event.cxx:428: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2332:info:build GDE_event.cxx:428: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2333:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_arbdb_io.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2334:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_HGLfile.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2335:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_Genbank.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2336:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_ARB_GDE -c GDE_FileIO.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2337:info:build ld   -arch x86_64  -r -o ARB_GDE.a GDE_ParseMenu.o GDE.o GDE_event.o GDE_arbdb_io.o  GDE_HGLfile.o GDE_Genbank.o GDE_FileIO.o
2338:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARB_GDE'
2339:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
2340:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2341:info:build make[3]: `server.a' is up to date.
2342:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2343:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
2344:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2345:info:build make[3]: `server.a' is up to date.
2346:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2347:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
2348:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2349:info:build make[3]: `server.a' is up to date.
2350:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2351:info:build -------------------- Updating shared libraries
2352:info:build /usr/bin/make libs
2353:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2354:info:build cp LIBLINK/libARBDB.a lib/libARBDB.a
2355:info:build cp LIBLINK/libARBDBPP.a lib/libARBDBPP.a
2356:info:build cp LIBLINK/libARBDO.a lib/libARBDO.a
2357:info:build cp LIBLINK/libAW.a lib/libAW.a
2358:info:build cp LIBLINK/libAWT.a lib/libAWT.a
2359:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2360:info:build -------------------------------------------------------------------------------- Make everything in NAMES_COM
2361:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2362:info:build make[3]: `server.a' is up to date.
2363:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES_COM'
2364:info:build -------------------- Checking bin/arb_wetc
2365:info:build Target 'bin/arb_wetc' not found
2366:info:build -> rebuilding bin/arb_wetc (Wed Dec 31 15:59:59 1969)
2367:info:build Link bin/arb_wetc
2368:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_wetc -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK WETC/WETC.a SL/HELIX/HELIX.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2369:info:build -------------------------------------------------------------------------------- Make everything in PGT
2370:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PGT'
2371:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o main.o main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2372:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o dialog.o dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2373:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o arb_interface.o arb_interface.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2374:info:build arb_interface.cxx: In function ‘void set_AWAR(const char*, char*)’:
2375:info:build arb_interface.cxx:722: warning: unused variable ‘error’
2376:info:build arb_interface.cxx: In function ‘void set_CONFIG(const char*, const char*)’:
2377:info:build arb_interface.cxx:764: warning: unused variable ‘error’
2378:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o main_dialog.o main_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2379:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o import_dialog.o import_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2380:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o selection_dialog.o selection_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2381:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o file_import.o file_import.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2382:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o tiff_image.o tiff_image.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2383:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o image_dialog.o image_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2384:info:build image_dialog.cxx: In member function ‘void imageDialog::set_ARB_image_path(const char*)’:
2385:info:build image_dialog.cxx:1189: warning: unused variable ‘error’
2386:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o plot.o plot.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2387:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o analyze_window.o analyze_window.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2388:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o entry_sel_dialog.o entry_sel_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2389:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o config_dialog.o config_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2390:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o help_dialog.o help_dialog.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2391:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PGT -c -o msgbox.o msgbox.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2392:info:build ld   -arch x86_64  -r -o PGT.a main.o dialog.o arb_interface.o main_dialog.o import_dialog.o selection_dialog.o file_import.o tiff_image.o image_dialog.o plot.o analyze_window.o entry_sel_dialog.o config_dialog.o help_dialog.o msgbox.o
2393:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PGT'
2394:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
2395:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2396:info:build make[3]: `server.a' is up to date.
2397:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2398:info:build -------------------- Checking bin/arb_dist
2399:info:build Target 'bin/arb_dist' not found
2400:info:build -> rebuilding bin/arb_dist (Wed Dec 31 15:59:59 1969)
2401:info:build Link bin/arb_dist
2402:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_dist -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PROBE_COM/client.a DIST/DIST.a SERVERCNTRL/SERVERCNTRL.a CONSENSUS_TREE/CONSENSUS_TREE.a EISPACK/EISPACK.a SL/HELIX/HELIX.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2403:info:build -------------------- Checking bin/arb_phylo
2404:info:build Target 'bin/arb_phylo' not found
2405:info:build -> rebuilding bin/arb_phylo (Wed Dec 31 15:59:59 1969)
2406:info:build Link bin/arb_phylo
2407:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_phylo -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PHYLO/PHYLO.a SL/HELIX/HELIX.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2408:info:build -------------------- Checking bin/arb_db_server
2409:info:build Target 'bin/arb_db_server' not found
2410:info:build -> rebuilding bin/arb_db_server (Wed Dec 31 15:59:59 1969)
2411:info:build Link bin/arb_db_server
2412:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_db_server -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK DBSERVER/DBSERVER.a SERVERCNTRL/SERVERCNTRL.a  -lARBDB  -lstdc++
2413:info:build -------------------- Checking bin/arb_pgt
2414:info:build Target 'bin/arb_pgt' not found
2415:info:build -> rebuilding bin/arb_pgt (Wed Dec 31 15:59:59 1969)
2416:info:build Link bin/arb_pgt
2417:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_pgt -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PGT/PGT.a  -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib -ltiff -lARBDB  -lstdc++
2418:info:build -------------------------------------------------------------------------------- Make everything in AWTC
2419:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWTC'
2420:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTC -c AWTC_constructSequence.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2421:info:build AWTC_constructSequence.cxx: In function ‘char* AWTC_constructSequence(int, const char**, int, char**)’:
2422:info:build AWTC_constructSequence.cxx:507: warning: unused variable ‘resultSeq’
2423:info:build AWTC_constructSequence.cxx:509: warning: unused variable ‘off’
2424:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTC -c AWTC_next_neighbours.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2425:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTC -c AWTC_seq_search.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2426:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_AWTC -c AWTC_submission.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2427:info:build ld   -arch x86_64  -r -o AWTC.a AWTC_constructSequence.o AWTC_next_neighbours.o AWTC_seq_search.o AWTC_submission.o
2428:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWTC'
2429:info:build -------------------------------------------------------------------------------- Make everything in MULTI_PROBE
2430:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/MULTI_PROBE'
2431:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_main.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2432:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_Window.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2433:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_noclass.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2434:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_sonde.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2435:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_sondentopf.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2436:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_mo_liste.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2437:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_probe.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2438:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_GenerationDuplicates.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2439:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_Generation.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2440:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_probe_combi_statistic.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2441:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_probe_tabs.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2442:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_MULTI_PROBE -c MP_permute.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2443:info:build ld   -arch x86_64  -r -o MULTI_PROBE.a MP_main.o MP_Window.o MP_noclass.o MP_sonde.o MP_sondentopf.o MP_mo_liste.o MP_probe.o MP_GenerationDuplicates.o MP_Generation.o MP_probe_combi_statistic.o MP_probe_tabs.o MP_permute.o
2444:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/MULTI_PROBE'
2445:info:build -------------------------------------------------------------------------------- Make everything in PROBE_DESIGN
2446:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_DESIGN'
2447:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_DESIGN -c -o probe_design.o probe_design.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2448:info:build probe_design.cxx: In function ‘void pd_query_pt_server(AW_window*)’:
2449:info:build probe_design.cxx:1769: warning: ignoring return value of ‘const char* GB_xcmd(const char*, GB_BOOL, GB_BOOL)’, declared with attribute warn_unused_result
2450:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_DESIGN -c -o SaiProbeVisualization.o SaiProbeVisualization.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2451:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE_DESIGN -c -o probe_match_parser.o probe_match_parser.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2452:info:build ld   -arch x86_64  -r -o PROBE_DESIGN.a probe_design.o SaiProbeVisualization.o probe_match_parser.o
2453:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_DESIGN'
2454:info:build -------------------------------------------------------------------------------- Make everything in SL/AW_NAME
2455:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
2456:info:build make[3]: `AW_NAME.a' is up to date.
2457:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
2458:info:build -------------------------------------------------------------------------------- Make everything in PROBE
2459:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE'
2460:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_new_design.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2461:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_family.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2462:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_prefixtree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2463:info:build PT_prefixtree.cxx: In function ‘long int PTD_write_tip_to_disk(FILE*, PTM2*, POS_TREE*, long int)’:
2464:info:build PT_prefixtree.cxx:453: warning: unused variable ‘i’
2465:info:build PT_prefixtree.cxx:454: warning: unused variable ‘data’
2466:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_main.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2467:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_io.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2468:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_etc.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2469:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_secundaer.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2470:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_buildtree.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2471:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_match.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2472:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_PROBE -c PT_findEx.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -I./../probe_bank/COM
2473:info:build ld   -arch x86_64  -r -o PROBE.a PT_new_design.o PT_family.o PT_prefixtree.o PT_main.o PT_io.o PT_etc.o PT_secundaer.o PT_buildtree.o PT_match.o PT_findEx.o
2474:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE'
2475:info:build -------------------------------------------------------------------------------- Make everything in NAMES
2476:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES'
2477:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NAMES -I/opt/gcc.3.4.3/include/c++/3.4.3/include -c names.cxx  -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2478:info:build ld   -arch x86_64  -r -o NAMES.a names.o
2479:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NAMES'
2480:info:build -------------------------------------------------------------------------------- Make everything in NALIGNER
2481:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NALIGNER'
2482:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_aligner.o ali_aligner.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2483:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_arbdb.o ali_arbdb.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2484:info:build ali_arbdb.cxx: In member function ‘int ALI_ARBDB::put_SAI(const char*, char*)’:
2485:info:build ali_arbdb.cxx:157: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2486:info:build ali_arbdb.cxx:157: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2487:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_global.o ali_global.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2488:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_main.o ali_main.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2489:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_pathmap.o ali_pathmap.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2490:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_prealigner.o ali_prealigner.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2491:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_profile.o ali_profile.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2492:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_pt.o ali_pt.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2493:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_sequence.o ali_sequence.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2494:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_NALIGNER -c -o ali_solution.o ali_solution.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2495:info:build ld   -arch x86_64  -r -o NALIGNER.a ali_aligner.o ali_arbdb.o ali_global.o ali_main.o ali_pathmap.o ali_prealigner.o ali_profile.o ali_pt.o ali_sequence.o ali_solution.o
2496:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/NALIGNER'
2497:info:build -------------------- Checking bin/arb_ntree
2498:info:build Target 'bin/arb_ntree' not found
2499:info:build -> rebuilding bin/arb_ntree (Wed Dec 31 15:59:59 1969)
2500:info:build Link bin/arb_ntree
2501:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_ntree -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PROBE_COM/client.a ARB_GDE/ARB_GDE.a AWTC/AWTC.a AWTI/AWTI.a GENOM/GENOM.a GENOM_IMPORT/GENOM_IMPORT.a MERGE/MERGE.a MULTI_PROBE/MULTI_PROBE.a NTREE/NTREE.a PRIMER_DESIGN/PRIMER_DESIGN.a PROBE_DESIGN/PROBE_DESIGN.a SEQ_QUALITY/SEQ_QUALITY.a SERVERCNTRL/SERVERCNTRL.a SL/AW_NAME/AW_NAME.a SL/DB_SCANNER/DB_SCANNER.a SL/FILE_BUFFER/FILE_BUFFER.a SL/HELIX/HELIX.a SL/REGEXPR/REGEXPR.a SL/TREE_READ/TREE_READ.a SL/TREE_WRITE/TREE_WRITE.a STAT/STAT.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2502:info:build -------------------- Checking bin/arb_pars
2503:info:build Target 'bin/arb_pars' not found
2504:info:build -> rebuilding bin/arb_pars (Wed Dec 31 15:59:59 1969)
2505:info:build Link bin/arb_pars
2506:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_pars -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK NAMES_COM/client.a SERVERCNTRL/SERVERCNTRL.a PARSIMONY/PARSIMONY.a SL/HELIX/HELIX.a SL/AW_NAME/AW_NAME.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2507:info:build -------------------- Checking bin/arb_edit
2508:info:build Target 'bin/arb_edit' not found
2509:info:build -> rebuilding bin/arb_edit (Wed Dec 31 15:59:59 1969)
2510:info:build Link bin/arb_edit
2511:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_edit -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK NAMES_COM/client.a SERVERCNTRL/SERVERCNTRL.a EDIT/EDIT.a ARB_GDE/ARB_GDE.a STAT/STAT.a XML/XML.a SL/HELIX/HELIX.a SL/AW_HELIX/AW_HELIX.a SL/AW_NAME/AW_NAME.a  -lARBDBPP -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2512:info:build -------------------- Checking bin/arb_edit4
2513:info:build Target 'bin/arb_edit4' not found
2514:info:build -> rebuilding bin/arb_edit4 (Wed Dec 31 15:59:59 1969)
2515:info:build Link bin/arb_edit4
2516:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_edit4 -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK NAMES_COM/client.a AWTC/AWTC.a EDIT4/EDIT4.a SECEDIT/SECEDIT.a SERVERCNTRL/SERVERCNTRL.a STAT/STAT.a ARB_GDE/ARB_GDE.a ISLAND_HOPPING/ISLAND_HOPPING.a SL/FAST_ALIGNER/FAST_ALIGNER.a SL/HELIX/HELIX.a SL/AW_HELIX/AW_HELIX.a SL/AW_NAME/AW_NAME.a SL/FILE_BUFFER/FILE_BUFFER.a XML/XML.a  -framework GLUT -framework OpenGL -lARBDB  -lstdc++ -lAW -lAWT -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
2517:info:build -------------------- Checking bin/arb_pt_server
2518:info:build Target 'bin/arb_pt_server' not found
2519:info:build -> rebuilding bin/arb_pt_server (Wed Dec 31 15:59:59 1969)
2520:info:build Link bin/arb_pt_server
2521:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_pt_server -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PROBE_COM/server.a SERVERCNTRL/SERVERCNTRL.a SL/HELIX/HELIX.a  PROBE/PROBE.a  -lARBDB PROBE_COM/client.a  -lstdc++
2522:info:build -------------------- Checking bin/arb_name_server
2523:info:build Target 'bin/arb_name_server' not found
2524:info:build -> rebuilding bin/arb_name_server (Wed Dec 31 15:59:59 1969)
2525:info:build Link bin/arb_name_server
2526:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_name_server -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK NAMES_COM/server.a NAMES/NAMES.a SERVERCNTRL/SERVERCNTRL.a  -lARBDB NAMES_COM/client.a  -lstdc++
2527:info:build -------------------- Checking bin/arb_naligner
2528:info:build Target 'bin/arb_naligner' not found
2529:info:build -> rebuilding bin/arb_naligner (Wed Dec 31 15:59:59 1969)
2530:info:build Link bin/arb_naligner
2531:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o bin/arb_naligner -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK PROBE_COM/client.a NALIGNER/NALIGNER.a SERVERCNTRL/SERVERCNTRL.a SL/HELIX/HELIX.a  -lARBDB  -lstdc++
2532:info:build -------------------------------------------------------------------------------- Make everything in HELP_SOURCE
2533:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2534:info:build /usr/bin/make date.xsl.tmp
2535:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2536:info:build cat date.xsl.header >date.xsl.tmp
2537:info:build bash -c "(export LC_ALL=C;date '+%d. %b %Y')" >>date.xsl.tmp
2538:info:build cat date.xsl.footer >>date.xsl.tmp
2539:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2540:info:build ../SOURCE_TOOLS/mv_if_diff date.xsl.tmp date.xsl
2541:info:build date.xsl created.
2542:info:build ---------------------------------------------------
2543:info:build ------------ Generating some help files:
2544:info:build (cd genhelp;/usr/bin/make all)
2545:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/genhelp'
2546:info:build Updating copyright.hlp from ../../arb_LICENSE.txt
2547:info:build Updating changes.hlp from ../../arb_CHANGES.txt
2548:info:build Updating agde_CAP2.hlp from ../../GDEHELP/HELP_GEN/CAP2.help
2549:info:build Updating agde_DNAml_rates.hlp from ../../GDEHELP/HELP_GEN/DNAml_rates.help
2550:info:build Updating agde_clustalw.hlp from ../../GDEHELP/HELP_GEN/clustalw.help
2551:info:build Updating agde_clustalw_sub_clustalw_doc.hlp from ../../GDEHELP/HELP_GEN/clustalw_sub_clustalw_doc.help
2552:info:build Updating agde_clustalw_sub_clustalw_help.hlp from ../../GDEHELP/HELP_GEN/clustalw_sub_clustalw_help.help
2553:info:build Updating agde_dnaml.hlp from ../../GDEHELP/HELP_GEN/dnaml.help
2554:info:build Updating agde_dnaml_sub_AxML_doc.hlp from ../../GDEHELP/HELP_GEN/dnaml_sub_AxML_doc.help
2555:info:build Updating agde_dnaml_sub_fastDNAml_doc.hlp from ../../GDEHELP/HELP_GEN/dnaml_sub_fastDNAml_doc.help
2556:info:build Updating agde_dnapars.hlp from ../../GDEHELP/HELP_GEN/dnapars.help
2557:info:build Updating agde_lsadt.hlp from ../../GDEHELP/HELP_GEN/lsadt.help
2558:info:build Updating agde_phylip_distance.hlp from ../../GDEHELP/HELP_GEN/phylip_distance.help
2559:info:build Updating agde_phylip_distance_sub_dnadist_doc.hlp from ../../GDEHELP/HELP_GEN/phylip_distance_sub_dnadist_doc.help
2560:info:build Updating agde_phylip_distance_sub_fitch_doc.hlp from ../../GDEHELP/HELP_GEN/phylip_distance_sub_fitch_doc.help
2561:info:build Updating agde_phylip_distance_sub_kitsch_doc.hlp from ../../GDEHELP/HELP_GEN/phylip_distance_sub_kitsch_doc.help
2562:info:build Updating agde_phylip_distance_sub_neighbor_doc.hlp from ../../GDEHELP/HELP_GEN/phylip_distance_sub_neighbor_doc.help
2563:info:build Updating agde_phylip_distance_sub_protdist_doc.hlp from ../../GDEHELP/HELP_GEN/phylip_distance_sub_protdist_doc.help
2564:info:build Updating agde_phyml.hlp from ../../GDEHELP/HELP_GEN/phyml.help
2565:info:build Updating agde_proml.hlp from ../../GDEHELP/HELP_GEN/proml.help
2566:info:build Updating agde_protpars.hlp from ../../GDEHELP/HELP_GEN/protpars.help
2567:info:build Updating agde_readseq.hlp from ../../GDEHELP/HELP_GEN/readseq.help
2568:info:build Updating agde_readseq_sub_Formats.hlp from ../../GDEHELP/HELP_GEN/readseq_sub_Formats.help
2569:info:build Updating agde_readseq_sub_Readme.hlp from ../../GDEHELP/HELP_GEN/readseq_sub_Readme.help
2570:info:build Updating agde_readseq_sub_Readseq_help.hlp from ../../GDEHELP/HELP_GEN/readseq_sub_Readseq_help.help
2571:info:build Updating agde_treepuzzle.hlp from ../../GDEHELP/HELP_GEN/treepuzzle.help
2572:info:build Updating agde_raxml.hlp from ../../GDEHELP/HELP_WRITTEN/raxml.help
2573:info:build Updating GDE overview agde.hlp
2574:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE/genhelp'
2575:info:build mkdir -p Xml
2576:info:build mkdir -p Xml/prompt
2577:info:build mkdir -p ../lib/help_html
2578:info:build mkdir -p ../lib/help_html/prompt
2579:info:build mkdir -p ../lib/help
2580:info:build mkdir -p ../lib/help/prompt
2581:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_HELP_SOURCE -c arb_help2xml.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2582:info:build cp -p oldhelp/consensus.ps.gz ../lib/help/consensus.ps.gz
2583:info:build cp -p oldhelp/pos_variability.ps.gz ../lib/help/pos_variability.ps.gz
2584:info:build cp -p oldhelp/arb.pdf.gz ../lib/help/arb.pdf.gz
2585:info:build cp -p oldhelp/rna3d_manual.pdf.gz ../lib/help/rna3d_manual.pdf.gz
2586:info:build find ../lib/help_html -name "*.html" -size -1 -exec rm {} \;
2587:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_help2xml arb_help2xml.o ../XML/XML.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2588:info:build --------------------------------------------------- [old hlp 2 xml]
2589:info:build time /usr/bin/make xml
2590:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2591:info:build touch xml.stamp
2592:info:build oldhelp/gde.hlp:6: Warning: Dead link to 'ale.hlp'
2593:info:build oldhelp/treeadm.hlp:6: Warning: Dead link to 'tr_export.hlp'
2594:info:build ./generate_index.pl help_index.xml Xml > Xml/help_index.xml
2595:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2596:info:build        11.68 real         4.69 user         4.04 sys
2597:info:build --------------------------------------------------- [xml 2 hlp]
2598:info:build time /usr/bin/make help
2599:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2600:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2601:info:build         4.24 real         4.25 user         1.87 sys
2602:info:build /usr/bin/make ../lib/help/FORM.hlp
2603:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2604:info:build cp -p oldhelp/FORM.hlp ../lib/help/FORM.hlp
2605:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2606:info:build --------------------------------------------------- [xml 2 html]
2607:info:build time /usr/bin/make html
2608:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2609:info:build cp -p Logo_25wht.gif ../lib/help_html/Logo_25wht.gif
2610:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2611:info:build         3.65 real         3.20 user         2.14 sys
2612:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/HELP_SOURCE'
2613:info:build make[2]: Nothing to be done for `help'.
2614:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2615:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2616:info:build /usr/bin/make libs
2617:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2618:info:build make[1]: Nothing to be done for `libs'.
2619:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2620:info:build /usr/bin/make convert tools gde readseq
2621:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2622:info:build -------------------------------------------------------------------------------- Make everything in SL/FILE_BUFFER
2623:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
2624:info:build make[2]: `FILE_BUFFER.a' is up to date.
2625:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
2626:info:build -------------------------------------------------------------------------------- Make everything in ARBDB
2627:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
2628:info:build make[2]: `libARBDB.a' is up to date.
2629:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
2630:info:build -------------------------------------------------------------------------------- Make everything in ARBDBS
2631:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
2632:info:build make[2]: `libARBDB.a' is up to date.
2633:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
2634:info:build -------------------------------------------------------------------------------- Make everything in ARBDB2
2635:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
2636:info:build make[2]: `libARBDB.a' is up to date.
2637:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
2638:info:build -------------------------------------------------------------------------------- Make everything in ARBDBPP
2639:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
2640:info:build make[2]: `libARBDBPP.a' is up to date.
2641:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
2642:info:build -------------------------------------------------------------------------------- Make everything in WINDOW
2643:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
2644:info:build make[2]: `libAW.a' is up to date.
2645:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
2646:info:build -------------------------------------------------------------------------------- Make everything in AWT
2647:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
2648:info:build make[2]: `libAWT.a' is up to date.
2649:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
2650:info:build -------------------------------------------------------------------------------- Make everything in SERVERCNTRL
2651:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
2652:info:build make[2]: `SERVERCNTRL.a' is up to date.
2653:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
2654:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
2655:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
2656:info:build make[2]: Nothing to be done for `dummy.a'.
2657:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
2658:info:build -------------------------------------------------------------------------------- Make everything in AISC
2659:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
2660:info:build make[2]: Nothing to be done for `dummy.a'.
2661:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
2662:info:build -------------------------------------------------------------------------------- Make everything in SL
2663:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
2664:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
2665:info:build make[3]: `TREE_READ.a' is up to date.
2666:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
2667:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
2668:info:build make[3]: `TREE_WRITE.a' is up to date.
2669:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
2670:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
2671:info:build make[3]: `HELIX.a' is up to date.
2672:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
2673:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
2674:info:build make[3]: `AW_HELIX.a' is up to date.
2675:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
2676:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
2677:info:build make[3]: `AW_NAME.a' is up to date.
2678:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
2679:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
2680:info:build make[3]: `DB_SCANNER.a' is up to date.
2681:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
2682:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
2683:info:build make[3]: `FILE_BUFFER.a' is up to date.
2684:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
2685:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
2686:info:build make[3]: `REGEXPR.a' is up to date.
2687:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
2688:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
2689:info:build make[3]: `FAST_ALIGNER.a' is up to date.
2690:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
2691:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
2692:info:build -------------------------------------------------------------------------------- Make everything in READSEQ
2693:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/READSEQ'
2694:info:build make[2]: Nothing to be done for `all'.
2695:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/READSEQ'
2696:info:build -------------------- Updating shared libraries
2697:info:build /usr/bin/make libs
2698:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2699:info:build make[2]: Nothing to be done for `libs'.
2700:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2701:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
2702:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2703:info:build make[2]: `server.a' is up to date.
2704:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
2705:info:build /usr/bin/make CONVERTALN/CONVERTALN.dummy
2706:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2707:info:build -------------------------------------------------------------------------------- Make everything in CONVERTALN
2708:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/CONVERTALN'
2709:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c main.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2710:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c fconv.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2711:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c mg.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2712:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c genbank.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2713:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c macke.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2714:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c phylip.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2715:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c paup.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2716:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c util.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2717:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c date.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2718:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c embl.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2719:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c gcg.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2720:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c printable.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2721:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c alma.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2722:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c routines.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2723:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_CONVERTALN -Wstrict-prototypes -c convert.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2724:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_convert_aln main.o fconv.o mg.o genbank.o macke.o phylip.o paup.o util.o date.o embl.o gcg.o printable.o alma.o routines.o convert.o ../SL/FILE_BUFFER/FILE_BUFFER.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2725:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/CONVERTALN'
2726:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2727:info:build -------------------------------------------------------------------------------- Make everything in TOOLS
2728:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TOOLS'
2729:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_2_ascii.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2730:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_2_bin.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2731:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_a2ps.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2732:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_count_chars.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2733:info:build arb_count_chars.cxx: In function ‘int main(int, char**)’:
2734:info:build arb_count_chars.cxx:99: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2735:info:build arb_count_chars.cxx:99: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2736:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_dnarates.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2737:info:build arb_dnarates.c: In function ‘writeToArb’:
2738:info:build arb_dnarates.c:1824: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2739:info:build arb_dnarates.c:1826: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2740:info:build arb_dnarates.c:1828: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2741:info:build arb_dnarates.c:1830: warning: ‘GBT_add_data’ is deprecated (declared at /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE/ad_t_prot.h:108)
2742:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_export_rates.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2743:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_export_tree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2744:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_gene_probe.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2745:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_message.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2746:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_notify.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2747:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_primer.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2748:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_probe.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2749:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_proto_2_xsub.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2750:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_read_tree.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2751:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_replace.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2752:info:build /usr/bin/llvm-g++-4.2  -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_TOOLS -c arb_swap_rnastr.cxx -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2753:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_2_ascii arb_2_ascii.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2754:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_2_bin arb_2_bin.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2755:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_a2ps arb_a2ps.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2756:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_count_chars arb_count_chars.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2757:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_dnarates arb_dnarates.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2758:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_export_rates arb_export_rates.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2759:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_export_tree arb_export_tree.o ../SL/TREE_WRITE/TREE_WRITE.a ../XML/XML.a ../SL/TREE_READ/TREE_READ.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2760:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_gene_probe arb_gene_probe.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2761:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_message arb_message.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2762:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_notify arb_notify.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2763:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_primer arb_primer.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2764:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_probe arb_probe.o ../SERVERCNTRL/SERVERCNTRL.a ../PROBE_COM/client.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2765:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_proto_2_xsub arb_proto_2_xsub.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2766:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_read_tree arb_read_tree.o ../SL/TREE_READ/TREE_READ.a -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2767:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_replace arb_replace.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2768:info:build /usr/bin/llvm-g++-4.2   -arch x86_64   -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_swap_rnastr arb_swap_rnastr.o -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/LIBLINK -lARBDB
2769:info:build rm arb_a2ps.o
2770:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TOOLS'
2771:info:build -------------------------------------------------------------------------------- Make everything in GDE
2772:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE'
2773:info:build ----------------- non-ARB code: warnings disabled
2774:info:build /usr/bin/make CLUSTAL/CLUSTAL.dummy SUPPORT/SUPPORT.dummy AxML/AxML.dummy RAxML/RAxML.dummy PHYML/PHYML.dummy  CLUSTALW/CLUSTALW.dummy PHYLIP/PHYLIP.dummy TREEPUZZLE/TREEPUZZLE.dummy FASTDNAML/FASTDNAML.dummy
2775:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE'
2776:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/CLUSTAL'
2777:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o clustalv.o clustalv.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2778:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o amenu.o amenu.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2779:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o myers.o myers.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2780:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o sequence.o sequence.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2781:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o showpair.o showpair.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2782:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o upgma.o upgma.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2783:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o util.o util.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2784:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o trees.o trees.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2785:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -c -o gcgcheck.o gcgcheck.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2786:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTAL -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/clustalv clustalv.o amenu.o myers.o sequence.o showpair.o upgma.o util.o trees.o gcgcheck.o -lm
2787:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/CLUSTAL'
2788:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/SUPPORT'
2789:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/CAP2 CAP2.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2790:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/Restriction Restriction.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2791:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/Zuk_to_gen Zuk_to_gen.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2792:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/count count.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2793:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/findall findall.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2794:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/lsadt lsadt.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2795:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/sho_helix sho_helix.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2796:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_SUPPORT -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/varpos varpos.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5 -lm
2797:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/SUPPORT'
2798:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/AxML'
2799:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_AxML -c -o axml.o axml.c
2800:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_AxML -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/axml axml.o -lm
2801:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/AxML'
2802:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/RAxML'
2803:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o axml.o axml.c
2804:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o raxmlParsimony.o raxmlParsimony.c
2805:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o rev_functions.o rev_functions.c
2806:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o optimizeModel.o optimizeModel.c
2807:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o multiple.o multiple.c
2808:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o searchAlgo.o searchAlgo.c
2809:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o topologies.o topologies.c
2810:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o parsePartitions.o parsePartitions.c
2811:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o treeIO.o treeIO.c
2812:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o models.o models.c
2813:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o bipartitionList.o bipartitionList.c
2814:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o rapidBootstrap.o rapidBootstrap.c
2815:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o evaluatePartialGeneric.o evaluatePartialGeneric.c
2816:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o evaluateGeneric.o evaluateGeneric.c
2817:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o newviewGeneric.o newviewGeneric.c
2818:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o makenewzGeneric.o makenewzGeneric.c
2819:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o evaluateGenericVector.o evaluateGenericVector.c
2820:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -c -o categorizeGeneric.o categorizeGeneric.c
2821:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_RAxML -fomit-frame-pointer -funroll-loops   -o  /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/raxmlHPC axml.o raxmlParsimony.o rev_functions.o optimizeModel.o multiple.o searchAlgo.o topologies.o parsePartitions.o treeIO.o models.o bipartitionList.o rapidBootstrap.o evaluatePartialGeneric.o evaluateGeneric.o newviewGeneric.o makenewzGeneric.o  evaluateGenericVector.o categorizeGeneric.o  -lm
2822:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/RAxML'
2823:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/PHYML'
2824:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o main.o main.c
2825:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o utilities.o utilities.c
2826:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o optimiz.o optimiz.c
2827:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o lk.o lk.c
2828:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o bionj.o bionj.c
2829:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o models.o models.c
2830:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o free.o free.c
2831:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o options.o options.c
2832:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o simu.o simu.c
2833:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC -DUNIX -DPHYML -c -o eigen.o eigen.c
2834:info:build /usr/bin/llvm-gcc-4.2 -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/phyml main.o utilities.o optimiz.o lk.o bionj.o models.o free.o options.o simu.o eigen.o -lm -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYML -fomit-frame-pointer -fPIC
2835:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/PHYML'
2836:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/CLUSTALW'
2837:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o alnscore.o alnscore.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2838:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o amenu.o amenu.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2839:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o calcgapcoeff.o calcgapcoeff.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2840:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o calcprf1.o calcprf1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2841:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o calcprf2.o calcprf2.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2842:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o calctree.o calctree.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2843:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o clustalw.o clustalw.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2844:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o gcgcheck.o gcgcheck.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2845:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o interface.o interface.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2846:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o malign.o malign.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2847:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o pairalign.o pairalign.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2848:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o prfalign.o prfalign.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2849:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o random.o random.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2850:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o readmat.o readmat.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2851:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o sequence.o sequence.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2852:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o showpair.o showpair.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2853:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o trees.o trees.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2854:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -c -o util.o util.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2855:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_CLUSTALW -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/clustalw alnscore.o amenu.o calcgapcoeff.o calcprf1.o calcprf2.o calctree.o clustalw.o gcgcheck.o interface.o malign.o pairalign.o prfalign.o random.o readmat.o sequence.o showpair.o trees.o util.o -lm
2856:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/CLUSTALW'
2857:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/TREEPUZZLE'
2858:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/gamma.o src/gamma.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2859:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/ml1.o src/ml1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2860:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/ml2.o src/ml2.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2861:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/ml3.o src/ml3.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2862:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/model1.o src/model1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2863:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/model2.o src/model2.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2864:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/puzzle1.o src/puzzle1.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2865:info:build WARNING: While resolving call to function 'printversion' arguments were dropped!
2866:info:build WARNING: While resolving call to function 'printversion' arguments were dropped!
2867:info:build WARNING: While resolving call to function 'printversion' arguments were dropped!
2868:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/puzzle2.o src/puzzle2.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2869:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/sched.o src/sched.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2870:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -c -o src/util.o src/util.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2871:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_TREEPUZZLE -DPACKAGE=\"tree-puzzle\" -DVERSION=\"5.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -Isrc -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/puzzle src/gamma.o src/ml1.o src/ml2.o src/ml3.o src/model1.o src/model2.o src/puzzle1.o src/puzzle2.o src/sched.o src/util.o  -lm
2872:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/TREEPUZZLE'
2873:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/FASTDNAML'
2874:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_FASTDNAML -c -o fastDNAml.o fastDNAml.c -I. -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE -I/opt/local/include -I/System/Library/Frameworks/GLUT.framework/Headers -I/System/Library/Frameworks/OpenGL.framework/Headers -I/usr/include/krb5
2875:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_FASTDNAML -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/fastdnaml fastDNAml.o -lm
2876:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/FASTDNAML'
2877:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/PHYLIP'
2878:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP clique.c
2879:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP disc.c
2880:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP phylip.c
2881:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP consense.c
2882:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP cons.c
2883:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP contml.c
2884:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP cont.c
2885:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP contrast.c
2886:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnacomp.c
2887:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP seq.c
2888:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnadist.c
2889:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnainvar.c
2890:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnaml.c
2891:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnamlk.c
2892:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnamove.c
2893:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP moves.c
2894:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnapars.c
2895:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dnapenny.c
2896:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dolmove.c
2897:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dollo.c
2898:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dollop.c
2899:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dolpenny.c
2900:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP factor.c
2901:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP fitch.c
2902:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP dist.c
2903:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP gendist.c
2904:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP kitsch.c
2905:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP mix.c
2906:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP wagner.c
2907:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP move.c
2908:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP neighbor.c
2909:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP pars.c
2910:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP discrete.c
2911:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP penny.c
2912:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP proml.c
2913:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP promlk.c
2914:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP protdist.c
2915:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP protpars.c
2916:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP restdist.c
2917:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP restml.c
2918:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP retree.c
2919:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP seqboot.c
2920:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP treedist.c
2921:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP drawgram.c
2922:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP draw.c
2923:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP draw2.c
2924:info:build /usr/bin/llvm-gcc-4.2 -c -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP drawtree.c
2925:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/clique clique.o disc.o phylip.o -lm -lc
2926:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/consense consense.o phylip.o cons.o -lm -lc
2927:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/contml contml.o cont.o phylip.o -lm -lc
2928:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/contrast contrast.o cont.o phylip.o -lm -lc
2929:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnacomp dnacomp.o seq.o phylip.o -lm -lc
2930:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnadist dnadist.o seq.o phylip.o -lm -lc
2931:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnainvar dnainvar.o seq.o phylip.o -lm -lc
2932:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnaml dnaml.o seq.o phylip.o -lm -lc
2933:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnamlk dnamlk.o seq.o phylip.o -lm -lc
2934:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnamove dnamove.o seq.o moves.o phylip.o -lm -lc
2935:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnapars dnapars.o seq.o phylip.o -lm -lc
2936:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dnapenny dnapenny.o seq.o phylip.o -lm -lc
2937:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dolmove dolmove.o disc.o moves.o dollo.o phylip.o -lm -lc
2938:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dollop dollop.o disc.o dollo.o phylip.o -lm -lc
2939:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/dolpenny dolpenny.o disc.o dollo.o phylip.o -lm -lc
2940:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/factor factor.o phylip.o -lm -lc
2941:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/fitch fitch.o dist.o phylip.o -lm -lc
2942:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/gendist gendist.o phylip.o -lm -lc
2943:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/kitsch kitsch.o dist.o phylip.o -lm -lc
2944:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/mix mix.o disc.o wagner.o phylip.o -lm -lc
2945:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/move move.o disc.o moves.o wagner.o phylip.o -lm -lc
2946:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/neighbor neighbor.o dist.o phylip.o -lm -lc
2947:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/pars pars.o discrete.o phylip.o -lm -lc
2948:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/penny penny.o disc.o wagner.o phylip.o -lm -lc
2949:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/proml proml.o seq.o phylip.o -lm -lc
2950:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/promlk promlk.o seq.o phylip.o -lm -lc
2951:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/protdist protdist.o seq.o phylip.o -lm -lc
2952:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/protpars protpars.o seq.o phylip.o -lm -lc
2953:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/restdist restdist.o seq.o phylip.o -lm -lc
2954:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/restml restml.o seq.o phylip.o -lm -lc
2955:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/retree retree.o moves.o phylip.o -lm -lc
2956:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/seqboot seqboot.o seq.o phylip.o -lm -lc
2957:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/treedist treedist.o phylip.o cons.o -lm -lc
2958:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/drawgram drawgram.o draw.o draw2.o phylip.o -lm -lc -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib -lXaw
2959:info:build /usr/bin/llvm-gcc-4.2 -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -w -DNDEBUG -DARB_64  -DDARWIN    -DFAKE_VTAB_PTR=char -DIN_ARB_GDE -DIN_ARB_PHYLIP -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/drawtree drawtree.o draw.o draw2.o phylip.o -lm -lc -L/opt/local/lib -lXm -lpng -lz -lXt -lX11 -lXext -lXp -lXmu -lXi -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib -lXaw
2960:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE/PHYLIP'
2961:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE'
2962:info:build ----------------- warnings enabled again
2963:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/GDE'
2964:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2965:info:build /usr/bin/make binlink
2966:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2967:info:build /usr/bin/make -C bin all
2968:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
2969:info:build find . -type l -exec rm {} \;
2970:info:build ln -s -f `find ../SH ../PERL_SCRIPTS -perm -100 ! -type d ! -name 'config*' -print` .
2971:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin'
2972:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2973:info:build /usr/bin/make perl
2974:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
2975:info:build -------------------------------------------------------------------------------- Make everything in ARBDB
2976:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
2977:info:build make[2]: `libARBDB.a' is up to date.
2978:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB'
2979:info:build -------------------------------------------------------------------------------- Make everything in ARBDBS
2980:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
2981:info:build make[2]: `libARBDB.a' is up to date.
2982:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBS'
2983:info:build -------------------------------------------------------------------------------- Make everything in ARBDB2
2984:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
2985:info:build make[2]: `libARBDB.a' is up to date.
2986:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB2'
2987:info:build -------------------------------------------------------------------------------- Make everything in SL
2988:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
2989:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
2990:info:build make[3]: `TREE_READ.a' is up to date.
2991:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_READ'
2992:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
2993:info:build make[3]: `TREE_WRITE.a' is up to date.
2994:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/TREE_WRITE'
2995:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
2996:info:build make[3]: `HELIX.a' is up to date.
2997:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/HELIX'
2998:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
2999:info:build make[3]: `AW_HELIX.a' is up to date.
3000:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_HELIX'
3001:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
3002:info:build make[3]: `AW_NAME.a' is up to date.
3003:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/AW_NAME'
3004:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
3005:info:build make[3]: `DB_SCANNER.a' is up to date.
3006:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/DB_SCANNER'
3007:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
3008:info:build make[3]: `FILE_BUFFER.a' is up to date.
3009:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FILE_BUFFER'
3010:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
3011:info:build make[3]: `REGEXPR.a' is up to date.
3012:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/REGEXPR'
3013:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
3014:info:build make[3]: `FAST_ALIGNER.a' is up to date.
3015:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL/FAST_ALIGNER'
3016:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SL'
3017:info:build -------------------------------------------------------------------------------- Make everything in ARBDBPP
3018:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
3019:info:build make[2]: `libARBDBPP.a' is up to date.
3020:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDBPP'
3021:info:build -------------------------------------------------------------------------------- Make everything in WINDOW
3022:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
3023:info:build make[2]: `libAW.a' is up to date.
3024:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/WINDOW'
3025:info:build -------------------------------------------------------------------------------- Make everything in AWT
3026:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
3027:info:build make[2]: `libAWT.a' is up to date.
3028:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AWT'
3029:info:build -------------------------------------------------------------------------------- Make everything in SERVERCNTRL
3030:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
3031:info:build make[2]: `SERVERCNTRL.a' is up to date.
3032:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/SERVERCNTRL'
3033:info:build -------------------------------------------------------------------------------- Make everything in AISC_MKPTPS
3034:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
3035:info:build make[2]: Nothing to be done for `dummy.a'.
3036:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC_MKPTPS'
3037:info:build -------------------------------------------------------------------------------- Make everything in AISC
3038:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
3039:info:build make[2]: Nothing to be done for `dummy.a'.
3040:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/AISC'
3041:info:build -------------------- Updating shared libraries
3042:info:build /usr/bin/make libs
3043:info:build -------------------------------------------------------------------------------- Make everything in PROBE_COM
3044:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
3045:info:build make[2]: `server.a' is up to date.
3046:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PROBE_COM'
3047:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
3048:info:build make[2]: Nothing to be done for `libs'.
3049:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
3050:info:build -------------------------------------------------------------------------------- Make everything in TOOLS
3051:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TOOLS'
3052:info:build make[2]: Nothing to be done for `all'.
3053:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/TOOLS'
3054:info:build -------------------------------------------------------------------------------- Make everything in PERL2ARB
3055:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3056:info:build Makefile.main:113: .depends: No such file or directory
3057:info:build touch depends.stamp
3058:info:build test -f ARB.c || /usr/bin/make -f Makefile.main "AUTODEPENDS=0" ARB.c
3059:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3060:info:build ( PATH=/usr/arb/bin:/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin:/opt/local/bin:/opt/local/sbin:/bin:/sbin:/usr/bin:/usr/sbin; \
3061:info:build       export PATH; \
3062:info:build       echo calling perl DARWIN.PL; \
3063:info:build       perl DARWIN.PL )
3064:info:build cat /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB/ad_prot.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/ARBDB/ad_t_prot.h  > proto.h
3065:info:build calling perl DARWIN.PL
3066:info:build echo "#undef DEBUG" > debug.h
3067:info:build echo "#undef NDEBUG" >> debug.h
3068:info:build echo "#define NDEBUG" >> debug.h
3069:info:build cp -p DARWIN.PL Makefile.PL
3070:info:build make[3]: [ARB.xs] Error 1 (ignored)
3071:info:build LD_LIBRARY_PATH=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/bin/arb_proto_2_xsub proto.h ARB.xs.default > ARB.xs
3072:info:build Just ran 'DARWIN.PL ' at DARWIN.PL line 6
3073:info:build Warning: -L../ARBDB2 changed to -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/../ARBDB2
3074:info:build Writing Makefile for ARB
3075:info:build -------- calling MakeMaker-Makefile (to get depends)
3076:info:build ( /usr/bin/make "dflags=-DNDEBUG -DARB_64  -DDARWIN " ARB.c || \
3077:info:build             (echo "------ failed.. retry once"; \
3078:info:build              /usr/bin/make "dflags=-DNDEBUG -DARB_64  -DDARWIN " ARB.c ))
3079:info:build make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3080:info:build /opt/local/bin/perl /opt/local/lib/perl5/5.12.4/ExtUtils/xsubpp  -typemap /opt/local/lib/perl5/5.12.4/ExtUtils/typemap -typemap typemap  ARB.xs > ARB.xsc && mv ARB.xsc ARB.c
3081:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3082:info:build -------- end of MakeMaker-Makefile
3083:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3084:info:build umask 002;makedepend -f- -- -O3 -arch x86_64 -pipe -fmessage-length=0 -funit-at-a-time -fPIC -W -Wall -DNDEBUG -DARB_64  -DDARWIN    -- -DARB_OPENGL -I. -Y/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/INCLUDE ARB.c 2>/dev/null | \
3085:info:build             perl -ne 's/ARB.o:/depends.stamp:/g; print $_;' | \
3086:info:build             ../SOURCE_TOOLS/fix_depends.pl > .depends
3087:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3088:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3089:info:build cp perlmain_source.c perlmain.c
3090:info:build cp ARB.pm /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/lib/ARB.pm
3091:info:build rm blib/arch/auto/ARB/ARB.bundle
3092:info:build rm: blib/arch/auto/ARB/ARB.bundle: No such file or directory
3093:info:build make[2]: [blib/arch/auto/ARB/ARB.bundle] Error 1 (ignored)
3094:info:build -------- calling MakeMaker-Makefile
3095:info:build ( /usr/bin/make "dflags=-DNDEBUG -DARB_64  -DDARWIN " blib/arch/auto/ARB/ARB.bundle || \
3096:info:build             (echo "------ failed.. retry once"; \
3097:info:build              /usr/bin/make "dflags=-DNDEBUG -DARB_64  -DDARWIN " blib/arch/auto/ARB/ARB.bundle))
3098:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3099:info:build /opt/local/bin/perl /opt/local/lib/perl5/5.12.4/ExtUtils/xsubpp  -typemap /opt/local/lib/perl5/5.12.4/ExtUtils/typemap -typemap typemap ARB.xs > ARB.xsc && mv ARB.xsc ARB.c
3100:info:build Running Mkbootstrap for ARB ()
3101:info:build chmod 644 ARB.bs
3102:info:build /usr/bin/llvm-gcc-4.2 -c  -I../INCLUDE -arch x86_64 -O3   -DVERSION=\"0.01\" -DXS_VERSION=\"0.01\"  "-I/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE"   ARB.c
3103:info:build ARB.xs: In function ‘XS_ARB_get_error’:
3104:info:build ARB.xs:244: warning: ‘GB_get_error’ is deprecated (declared at ../INCLUDE/ad_prot.h:43)
3105:info:build rm -f blib/arch/auto/ARB/ARB.bundle
3106:info:build LD_RUN_PATH="/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE" env MACOSX_DEPLOYMENT_TARGET=10.6 /usr/bin/gcc-4.2  -bundle -flat_namespace ARB.o  -o blib/arch/auto/ARB/ARB.bundle       \
3107:info:build        -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/../ARBDB2 -lARBDB -L/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE -lperl   \
3108:info:build       
3109:info:build env: /usr/bin/gcc-4.2: No such file or directory
3110:info:build make[3]: *** [blib/arch/auto/ARB/ARB.bundle] Error 127
3111:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3112:info:build ------ failed.. retry once
3113:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3114:info:build rm -f blib/arch/auto/ARB/ARB.bundle
3115:info:build LD_RUN_PATH="/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE" env MACOSX_DEPLOYMENT_TARGET=10.6 /usr/bin/gcc-4.2  -bundle -flat_namespace ARB.o  -o blib/arch/auto/ARB/ARB.bundle       \
3116:info:build        -L/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB/../ARBDB2 -lARBDB -L/opt/local/lib/perl5/5.12.4/darwin-thread-multi-2level/CORE -lperl   \
3117:info:build       
3118:info:build env: /usr/bin/gcc-4.2: No such file or directory
3119:info:build make[3]: *** [blib/arch/auto/ARB/ARB.bundle] Error 127
3120:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3121:info:build make[2]: *** [blib/arch/auto/ARB/ARB.bundle] Error 2
3122:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210/PERL2ARB'
3123:info:build make[1]: *** [perl] Error 2
3124:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
3125:info:build make: *** [all] Error 2
3126:info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210'
3127:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/work/arbsrc_8210" && /usr/bin/make -j2 -w all GCC=/usr/bin/llvm-gcc-4.2 GPP=/usr/bin/llvm-g++-4.2
3128:info:build Exit code: 2
3129:error:build org.macports.build for port arb returned: command execution failed
3130:debug:build Error code: CHILDSTATUS 10813 2
3131:debug:build Backtrace: command execution failed
3132    while executing
3133"system -nice 0 $fullcmdstring"
3134    ("eval" body line 1)
3135    invoked from within
3136"eval system $notty $nice \$fullcmdstring"
3137    invoked from within
3138"command_exec build"
3139    (procedure "portbuild::build_main" line 8)
3140    invoked from within
3141"$procedure $targetname"
3142:info:build Warning: targets not executed for arb: org.macports.build
3143:notice:build Please see the log file for port arb for details:
3144    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_arb/arb/main.log