Ticket #38491: main.log

File main.log, 66.0 KB (added by ryandesign (Ryan Carsten Schmidt), 12 years ago)
Line 
1version:1
2:msg:main --->  Computing dependencies for py25-pymc:msg:main
3:debug:main Searching for dependency: unzip
4:debug:main Found Dependency: receipt exists for unzip
5:debug:main Searching for dependency: python25
6:debug:main Found Dependency: receipt exists for python25
7:debug:main Searching for dependency: py25-numpy
8:debug:main Found Dependency: receipt exists for py25-numpy
9:debug:main Searching for dependency: gcc47
10:debug:main Found Dependency: receipt exists for gcc47
11:debug:main Executing org.macports.main (py25-pymc)
12:debug:main changing euid/egid - current euid: 0 - current egid: 0
13:debug:main egid changed to: 528
14:debug:main euid changed to: 501
15:debug:fetch fetch phase started at Fri Mar 22 05:31:47 CDT 2013
16:notice:fetch --->  Fetching distfiles for py25-pymc
17:debug:fetch Executing org.macports.fetch (py25-pymc)
18:info:fetch --->  pymc-2.0.zip doesn't seem to exist in /opt/local/var/macports/distfiles/python
19:notice:fetch --->  Attempting to fetch pymc-2.0.zip from http://distfiles.macports.org/python
20:debug:fetch Privilege de-escalation not attempted as not running as root.
21:debug:checksum checksum phase started at Fri Mar 22 05:32:09 CDT 2013
22:notice:checksum --->  Verifying checksum(s) for py25-pymc
23:debug:checksum Executing org.macports.checksum (py25-pymc)
24:info:checksum --->  Checksumming pymc-2.0.zip
25:debug:checksum Correct (md5) checksum for pymc-2.0.zip
26:debug:checksum Correct (sha1) checksum for pymc-2.0.zip
27:debug:checksum Correct (rmd160) checksum for pymc-2.0.zip
28:debug:checksum Privilege de-escalation not attempted as not running as root.
29:debug:extract extract phase started at Fri Mar 22 05:32:09 CDT 2013
30:notice:extract --->  Extracting py25-pymc
31:debug:extract setting option extract.cmd to /usr/bin/unzip
32:debug:extract setting option extract.pre_args to -q
33:debug:extract setting option extract.post_args to {-d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work}
34:debug:extract Executing org.macports.extract (py25-pymc)
35:info:extract --->  Extracting pymc-2.0.zip
36:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/python/pymc-2.0.zip'
37:debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8'
38:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work" && /usr/bin/unzip -q '/opt/local/var/macports/distfiles/python/pymc-2.0.zip' -d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work'
39:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work" && /usr/bin/unzip -q '/opt/local/var/macports/distfiles/python/pymc-2.0.zip' -d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work
40:debug:extract euid/egid changed to: 0/0
41:debug:extract chowned /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work to macports
42:debug:extract euid/egid changed to: 501/528
43:debug:extract Privilege de-escalation not attempted as not running as root.
44:debug:patch patch phase started at Fri Mar 22 05:32:09 CDT 2013
45:debug:patch Executing org.macports.patch (py25-pymc)
46:notice:patch --->  Applying patches to py25-pymc
47:info:patch --->  Applying patch-pymc-gibbsit.f.diff
48:debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8'
49:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /usr/bin/patch -p0'
50:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /usr/bin/patch -p0 < '/Users/rschmidt/macports/dports/python/py25-pymc/files/patch-pymc-gibbsit.f.diff'
51:info:patch patching file pymc/gibbsit.f
52:debug:patch Privilege de-escalation not attempted as not running as root.
53:debug:configure configure phase started at Fri Mar 22 05:32:09 CDT 2013
54:notice:configure --->  Configuring py25-pymc
55:debug:configure Using compiler 'Mac OS X Clang'
56:debug:configure Executing org.macports.configure (py25-pymc)
57:debug:configure Privilege de-escalation not attempted as not running as root.
58:debug:build build phase started at Fri Mar 22 05:32:09 CDT 2013
59:notice:build --->  Building py25-pymc
60:debug:build Executing proc-pre-org.macports.build-build-0
61:debug:build Executing org.macports.build (py25-pymc)
62:debug:build Environment: CPATH='/opt/local/include' CFLAGS='-arch x86_64' CXXFLAGS='-arch x86_64' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.8' F90FLAGS='-m64' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LDFLAGS='-arch x86_64' FCFLAGS='-m64' F90='/opt/local/bin/gfortran-mp-4.7' OBJCFLAGS='-arch x86_64' FFLAGS='-m64' F77='/opt/local/bin/gfortran-mp-4.7' CC_PRINT_OPTIONS='YES'
63:debug:build Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build'
64:debug:build Executing command line:  cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build
65:info:build running build
66:info:build running config_cc
67:info:build unifing config_cc, config, build_clib, build_ext, build commands --compiler options
68:info:build running config_fc
69:info:build unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
70:info:build running build_src
71:info:build build_src
72:info:build building extension "pymc.flib" sources
73:info:build f2py options: ['skip:ppnd7']
74:info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c
75:info:build creating build
76:info:build creating build/src.macosx-10.8-fat-2.5
77:info:build creating build/src.macosx-10.8-fat-2.5/pymc
78:info:build IOError: [Errno 2] No such file or directory: 'skip:ppnd7'. Skipping file "skip:ppnd7".
79:info:build updatevars:p: attempt to change 'dimension(k-1)' to 'dimension(k)'. Ignoring.
80:info:build rmbadname1: Replacing "index" with "index_bn".
81:info:build updatevars: "character curterms(20)*24" is mapped to "character curterms(20,24)"
82:info:build updatevars: "character septerms(20)*24" is mapped to "character septerms(20,24)"
83:info:build updatevars: "character tokens(maxtok)*(*)" is mapped to "character tokens(maxtok,(*))"
84:info:build rmbadname1: Replacing "index" with "index_bn".
85:info:build rmbadname1: Replacing "len" with "len_bn".
86:info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between x, nx
87:info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between w, x, nx
88:info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between n, nx, bin0, delta, x, d
89:info:build "object of type 'builtin_function_or_method' has no len()" in evaluating 'len(ord)' (available names: [])
90:info:build Reading fortran codes...
91:info:build     Reading file 'pymc/flib.f' (format:fix,strict)
92:info:build     Reading file 'pymc/histogram.f' (format:fix,strict)
93:info:build     Reading file 'pymc/flib_blas.f' (format:fix,strict)
94:info:build     Reading file 'pymc/math.f' (format:fix,strict)
95:info:build     Reading file 'pymc/gibbsit.f' (format:fix,strict)
96:info:build Line #1125 in pymc/gibbsit.f:"      DOUBLE PRECISION INTENT(CACHE,HIDE), DIMENSION(2*ITERACNT) :: WORK"
97:info:build     updatevars: attempt to change the type of "work" ("integer") to "double precision". Ignoring.
98:info:build Post-processing...
99:info:build     Block: flib
100:info:build                     Block: logsum
101:info:build                     Block: combinationln
102:info:build {'attrspec': ['intent(hide)']}
103:info:build In: :flib:pymc/flib.f:expand_triangular
104:info:build vars2fortran: No typespec for argument "nf".
105:info:build {'attrspec': ['intent(hide)']}
106:info:build In: :flib:pymc/flib.f:expand_triangular
107:info:build vars2fortran: No typespec for argument "n".
108:info:build                     Block: expand_triangular
109:info:build                     Block: standardize
110:info:build                     Block: gammln
111:info:build                     Block: mvgammln
112:info:build                     Block: factrl
113:info:build                     Block: factln
114:info:build                     Block: rskewnorm
115:info:build                     Block: uniform_like
116:info:build                     Block: duniform_like
117:info:build                     Block: exponweib
118:info:build                     Block: exponweib_ppf
119:info:build                     Block: constrain
120:info:build                     Block: poisson
121:info:build                     Block: t
122:info:build                     Block: multinomial
123:info:build                     Block: weibull
124:info:build                     Block: logistic
125:info:build                     Block: normal
126:info:build                     Block: hnormal
127:info:build                     Block: lognormal
128:info:build                     Block: arlognormal
129:info:build                     Block: gev
130:info:build                     Block: gev_ppf
131:info:build                     Block: gamma
132:info:build                     Block: igamma
133:info:build                     Block: hyperg
134:info:build                     Block: geometric
135:info:build                     Block: dirichlet
136:info:build                     Block: cauchy
137:info:build                     Block: negbin
138:info:build                     Block: negbin2
139:info:build                     Block: binomial
140:info:build                     Block: bernoulli
141:info:build                     Block: beta_like
142:info:build                     Block: mvhyperg
143:info:build                     Block: dirmultinom
144:info:build                     Block: wishart
145:info:build                     Block: trace
146:info:build                     Block: gamfun
147:info:build                     Block: gammds
148:info:build                     Block: trans
149:info:build                     Block: matmult
150:info:build                     Block: dtrm
151:info:build {}
152:info:build In: :flib:pymc/flib.f:elgs
153:info:build vars2fortran: No typespec for argument "n".
154:info:build                     Block: elgs
155:info:build                     Block: bico
156:info:build                     Block: chol
157:info:build                     Block: hermpoly
158:info:build                     Block: uniform
159:info:build                     Block: set_uniform
160:info:build                     Block: categorical
161:info:build                     Block: rcat
162:info:build                     Block: logit
163:info:build                     Block: invlogit
164:info:build                     Block: stukel_logit
165:info:build                     Block: stukel_invlogit
166:info:build                     Block: fixed_binsize
167:info:build                     Block: weighted_fixed_binsize
168:info:build                     Block: fixed_binsize_nd
169:info:build {'attrspec': ['dimension(n)']}
170:info:build In: :flib:pymc/histogram.f:qsorti
171:info:build vars2fortran: No typespec for argument "ord".
172:info:build {}
173:info:build In: :flib:pymc/histogram.f:qsorti
174:info:build vars2fortran: No typespec for argument "n".
175:info:build                     Block: qsorti
176:info:build                     Block: chol_mvnorm
177:info:build                     Block: cov_mvnorm
178:info:build                     Block: prec_mvnorm
179:info:build                     Block: blas_wishart
180:info:build                     Block: blas_wishart_cov
181:info:build                     Block: blas_inv_wishart
182:info:build                     Block: dtrsm_wrap
183:info:build                     Block: dtrmm_wrap
184:info:build                     Block: dchdc_wrap
185:info:build                     Block: dpotrs_wrap
186:info:build {}
187:info:build In: :flib:pymc/math.f:ppnd16
188:info:build vars2fortran: No typespec for argument "ifault".
189:info:build                     Block: ppnd16
190:info:build                     Block: calerf
191:info:build                     Block: derf
192:info:build                     Block: derfc
193:info:build                     Block: derfcx
194:info:build                     Block: gibbsit
195:info:build                     Block: matinput
196:info:build                     Block: vecinput
197:info:build                     Block: oneparse
198:info:build                     Block: gibbmain
199:info:build                     Block: empquant
200:info:build                     Block: dichot
201:info:build                     Block: thin
202:info:build                     Block: mctest
203:info:build                     Block: indtest
204:info:build                     Block: mcest
205:info:build                     Block: ppnd7
206:info:build                     Block: ssort
207:info:build Post-processing (stage 2)...
208:info:build Building modules...
209:info:build     Building module "flib"...
210:info:build             Constructing wrapper function "logsum"...
211:info:build               s = logsum(x)
212:info:build             Creating wrapper for Fortran function "combinationln"("combinationln")...
213:info:build             Constructing wrapper function "combinationln"...
214:info:build               combinationln = combinationln(n,k)
215:info:build             Constructing wrapper function "expand_triangular"...
216:info:build               t = expand_triangular(d,f)
217:info:build             Constructing wrapper function "standardize"...
218:info:build               z = standardize(x,loc,scale)
219:info:build             Creating wrapper for Fortran function "gammln"("gammln")...
220:info:build             Constructing wrapper function "gammln"...
221:info:build               gammln = gammln(xx)
222:info:build             Creating wrapper for Fortran function "mvgammln"("mvgammln")...
223:info:build             Constructing wrapper function "mvgammln"...
224:info:build               mvgammln = mvgammln(x,k)
225:info:build             Creating wrapper for Fortran function "factrl"("factrl")...
226:info:build             Constructing wrapper function "factrl"...
227:info:build               factrl = factrl(n)
228:info:build             Creating wrapper for Fortran function "factln"("factln")...
229:info:build             Constructing wrapper function "factln"...
230:info:build               factln = factln(n)
231:info:build             Constructing wrapper function "rskewnorm"...
232:info:build               x = rskewnorm(nx,mu,tau,alph,rn)
233:info:build             Constructing wrapper function "uniform_like"...
234:info:build               like = uniform_like(x,lower,upper)
235:info:build             Constructing wrapper function "duniform_like"...
236:info:build               like = duniform_like(x,lower,upper)
237:info:build             Constructing wrapper function "exponweib"...
238:info:build               like = exponweib(x,a,c,loc,scale)
239:info:build             Constructing wrapper function "exponweib_ppf"...
240:info:build               ppf = exponweib_ppf(q,a,c)
241:info:build             Constructing wrapper function "constrain"...
242:info:build               pass = constrain(x,a,b,allow_equal)
243:info:build             Constructing wrapper function "poisson"...
244:info:build               like = poisson(x,mu)
245:info:build             Constructing wrapper function "t"...
246:info:build               like = t(x,nu)
247:info:build             Constructing wrapper function "multinomial"...
248:info:build               like = multinomial(x,n,p)
249:info:build             Constructing wrapper function "weibull"...
250:info:build               like = weibull(x,alpha,beta)
251:info:build             Constructing wrapper function "logistic"...
252:info:build               like = logistic(x,mu,tau)
253:info:build             Constructing wrapper function "normal"...
254:info:build               like = normal(x,mu,tau)
255:info:build             Constructing wrapper function "hnormal"...
256:info:build               like = hnormal(x,tau)
257:info:build             Constructing wrapper function "lognormal"...
258:info:build               like = lognormal(x,mu,tau)
259:info:build             Constructing wrapper function "arlognormal"...
260:info:build               like = arlognormal(x,mu,sigma,rho,beta)
261:info:build             Constructing wrapper function "gev"...
262:info:build               like = gev(x,xi,mu,sigma)
263:info:build             Constructing wrapper function "gev_ppf"...
264:info:build               ppf = gev_ppf(q,xi)
265:info:build             Constructing wrapper function "gamma"...
266:info:build               like = gamma(x,alpha,beta)
267:info:build             Constructing wrapper function "igamma"...
268:info:build               like = igamma(x,alpha,beta)
269:info:build             Constructing wrapper function "hyperg"...
270:info:build               like = hyperg(x,draws,success,total)
271:info:build             Constructing wrapper function "geometric"...
272:info:build               like = geometric(x,p)
273:info:build             Constructing wrapper function "dirichlet"...
274:info:build               like = dirichlet(x,theta)
275:info:build             Constructing wrapper function "cauchy"...
276:info:build               like = cauchy(x,alpha,beta)
277:info:build             Constructing wrapper function "negbin"...
278:info:build               like = negbin(x,r,p)
279:info:build             Constructing wrapper function "negbin2"...
280:info:build               like = negbin2(x,mu,a)
281:info:build             Constructing wrapper function "binomial"...
282:info:build               like = binomial(x,n,p)
283:info:build             Constructing wrapper function "bernoulli"...
284:info:build               like = bernoulli(x,p)
285:info:build             Constructing wrapper function "beta_like"...
286:info:build               like = beta_like(x,alpha,beta)
287:info:build             Constructing wrapper function "mvhyperg"...
288:info:build               like = mvhyperg(x,color)
289:info:build             Constructing wrapper function "dirmultinom"...
290:info:build               like = dirmultinom(x,theta)
291:info:build             Constructing wrapper function "wishart"...
292:info:build               like = wishart(x,n,sigma)
293:info:build             Constructing wrapper function "trace"...
294:info:build               trace(mat,tr,[k])
295:info:build             Constructing wrapper function "gamfun"...
296:info:build               gx = gamfun(xx)
297:info:build             Creating wrapper for Fortran function "gammds"("gammds")...
298:info:build             Constructing wrapper function "gammds"...
299:info:build               gammds = gammds(y,p,ifault)
300:info:build             Constructing wrapper function "trans"...
301:info:build               tmat = trans(mat)
302:info:build             Constructing wrapper function "matmult"...
303:info:build               prod = matmult(mat1,mat2)
304:info:build             Constructing wrapper function "dtrm"...
305:info:build               d = dtrm(a)
306:info:build             Constructing wrapper function "elgs"...
307:info:build               elgs(a,indx,[n])
308:info:build             Creating wrapper for Fortran function "bico"("bico")...
309:info:build             Constructing wrapper function "bico"...
310:info:build               bico = bico(n,k)
311:info:build             Constructing wrapper function "chol"...
312:info:build               c = chol(a,[n])
313:info:build             Constructing wrapper function "hermpoly"...
314:info:build               cx = hermpoly(n,x)
315:info:build             Creating wrapper for Fortran function "uniform"("uniform")...
316:info:build             Constructing wrapper function "uniform"...
317:info:build               uniform = uniform()
318:info:build             Constructing wrapper function "set_uniform"...
319:info:build               set_uniform(seed1,seed2)
320:info:build             Constructing wrapper function "categorical"...
321:info:build               like = categorical(x,p)
322:info:build             Constructing wrapper function "rcat"...
323:info:build               s = rcat(p,rands)
324:info:build             Constructing wrapper function "logit"...
325:info:build               ltheta = logit(theta)
326:info:build             Constructing wrapper function "invlogit"...
327:info:build               theta = invlogit(ltheta)
328:info:build             Constructing wrapper function "stukel_logit"...
329:info:build               ltheta = stukel_logit(theta,a1,a2,[overwrite_theta])
330:info:build             Constructing wrapper function "stukel_invlogit"...
331:info:build               theta = stukel_invlogit(ltheta,a1,a2,[overwrite_ltheta])
332:info:build             Constructing wrapper function "fixed_binsize"...
333:info:build               h = fixed_binsize(x,bin0,delta,n)
334:info:build             Constructing wrapper function "weighted_fixed_binsize"...
335:info:build               h = weighted_fixed_binsize(x,w,bin0,delta,n)
336:info:build             Constructing wrapper function "fixed_binsize_nd"...
337:info:build               count = fixed_binsize_nd(x,bin0,delta,n,nc)
338:info:build             Constructing wrapper function "qsorti"...
339:info:build               qsorti(ord,a,[n])
340:info:build             Constructing wrapper function "chol_mvnorm"...
341:info:build               like = chol_mvnorm(x,mu,sig,[overwrite_x,overwrite_mu])
342:info:build             Constructing wrapper function "cov_mvnorm"...
343:info:build               like = cov_mvnorm(x,mu,c,[overwrite_x,overwrite_mu,overwrite_c])
344:info:build             Constructing wrapper function "prec_mvnorm"...
345:info:build               like = prec_mvnorm(x,mu,tau,[overwrite_x,overwrite_mu,overwrite_tau])
346:info:build             Constructing wrapper function "blas_wishart"...
347:info:build               like = blas_wishart(x,n,t,[overwrite_x,overwrite_t])
348:info:build             Constructing wrapper function "blas_wishart_cov"...
349:info:build               like = blas_wishart_cov(x,n,v,[overwrite_x,overwrite_v])
350:info:build             Constructing wrapper function "blas_inv_wishart"...
351:info:build               like = blas_inv_wishart(x,n,t,[overwrite_x,overwrite_t])
352:info:build             Constructing wrapper function "dtrsm_wrap"...
353:info:build               dtrsm_wrap(a,b,side,transa,uplo)
354:info:build             Constructing wrapper function "dtrmm_wrap"...
355:info:build               dtrmm_wrap(a,b,side,transa,uplo)
356:info:build             Constructing wrapper function "dchdc_wrap"...
357:info:build               piv,info = dchdc_wrap(a)
358:info:build             Constructing wrapper function "dpotrs_wrap"...
359:info:build               info = dpotrs_wrap(chol_fac,b,[uplo])
360:info:build             Creating wrapper for Fortran function "ppnd16"("ppnd16")...
361:info:build             Constructing wrapper function "ppnd16"...
362:info:build               ppnd16 = ppnd16(p,ifault)
363:info:build             Constructing wrapper function "calerf"...
364:info:build               calerf(arg,result,jint)
365:info:build             Creating wrapper for Fortran function "derf"("derf")...
366:info:build             Constructing wrapper function "derf"...
367:info:build               derf = derf(x)
368:info:build             Creating wrapper for Fortran function "derfc"("derfc")...
369:info:build             Constructing wrapper function "derfc"...
370:info:build               derfc = derfc(x)
371:info:build             Creating wrapper for Fortran function "derfcx"("derfcx")...
372:info:build             Constructing wrapper function "derfcx"...
373:info:build               derfcx = derfcx(x)
374:info:build             Constructing wrapper function "matinput"...
375:info:build               matinput(uid,matout,rowused,colused,r15,[rowmax,colmax])
376:info:build             Constructing wrapper function "vecinput"...
377:info:build               vecinput(uid,vecout,vecused,r15,[vecmax])
378:info:build             Constructing wrapper function "oneparse"...
379:info:build getarrdims:warning: assumed shape array, using 0 instead of '(*)'
380:info:build               oneparse(instring,delimit,tokens,tokcnt,r15,[maxtok])
381:info:build             Constructing wrapper function "gibbmain"...
382:info:build               nmin,kthin,nburn,nprec,kmind = gibbmain(original,q,r,s,epsilon)
383:info:build             Creating wrapper for Fortran function "empquant"("empquant")...
384:info:build             Constructing wrapper function "empquant"...
385:info:build getarrdims:warning: assumed shape array, using 0 instead of '*'
386:info:build               empquant = empquant(data,q,work,[iteracnt])
387:info:build             Constructing wrapper function "dichot"...
388:info:build               dichot(data,cutpt,zt,[iteracnt])
389:info:build             Constructing wrapper function "thin"...
390:info:build               thin(series,kthin,result,thincnt,[iteracnt])
391:info:build             Constructing wrapper function "mctest"...
392:info:build               mctest(data,g2,bic,[datacnt])
393:info:build             Constructing wrapper function "indtest"...
394:info:build               indtest(data,g2,bic,[datacnt])
395:info:build             Constructing wrapper function "mcest"...
396:info:build               mcest(data,alpha,beta,[datacnt])
397:info:build             Creating wrapper for Fortran function "ppnd7"("ppnd7")...
398:info:build             Constructing wrapper function "ppnd7"...
399:info:build               ppnd7 = ppnd7(p,ifault)
400:info:build             Constructing wrapper function "ssort"...
401:info:build               ssort(x,y,kflag,[n])
402:info:build             Constructing COMMON block support for "unif_seeds"...
403:info:build               s1,s2
404:info:build     Wrote C/API module "flib" to file "build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c"
405:info:build     Fortran 77 wrappers are saved to "build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f"
406:info:build   adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources.
407:info:build   adding 'build/src.macosx-10.8-fat-2.5' to include_dirs.
408:info:build copying /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/f2py/src/fortranobject.c -> build/src.macosx-10.8-fat-2.5
409:info:build copying /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/f2py/src/fortranobject.h -> build/src.macosx-10.8-fat-2.5
410:info:build   adding 'build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f' to sources.
411:info:build building extension "pymc.LazyFunction" sources
412:info:build building extension "pymc.Container_values" sources
413:info:build building extension "pymc.gp.linalg_utils" sources
414:info:build f2py options: []
415:info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/linalg_utilsmodule.c
416:info:build creating build/src.macosx-10.8-fat-2.5/pymc/gp
417:info:build Reading fortran codes...
418:info:build     Reading file 'pymc/gp/linalg_utils.f' (format:fix,strict)
419:info:build Post-processing...
420:info:build     Block: linalg_utils
421:info:build                     Block: remove_duplicates
422:info:build                     Block: check_repeats
423:info:build {'attrspec': ['intent(hide)']}
424:info:build In: :linalg_utils:pymc/gp/linalg_utils.f:dcopy_wrap
425:info:build vars2fortran: No typespec for argument "nx".
426:info:build                     Block: dcopy_wrap
427:info:build                     Block: diag_call
428:info:build                                     Block: cov_fun
429:info:build {'attrspec': ['intent(hide)']}
430:info:build In: :linalg_utils:pymc/gp/linalg_utils.f:basis_diag_call
431:info:build vars2fortran: No typespec for argument "nbas".
432:info:build                     Block: basis_diag_call
433:info:build                     Block: dtrmm_wrap
434:info:build                     Block: dtrsm_wrap
435:info:build                     Block: dpotrf_wrap
436:info:build                     Block: gp_array_logp
437:info:build Post-processing (stage 2)...
438:info:build Building modules...
439:info:build     Constructing call-back function "cb_cov_fun_in_diag_call__user__routines"
440:info:build       def cov_fun(xe): return q
441:info:build     Building module "linalg_utils"...
442:info:build             Constructing wrapper function "remove_duplicates"...
443:info:build               nr,rf,rt,nu,xu,ui = remove_duplicates(x)
444:info:build             Constructing wrapper function "check_repeats"...
445:info:build               f,new_indices,n_new_indices = check_repeats(x,x_sofar,f_sofar)
446:info:build             Constructing wrapper function "dcopy_wrap"...
447:info:build               dcopy_wrap(x,y)
448:info:build             Constructing wrapper function "diag_call"...
449:info:build               v = diag_call(x,cov_fun,[cov_fun_extra_args])
450:info:build             Constructing wrapper function "basis_diag_call"...
451:info:build               v = basis_diag_call(basis_x)
452:info:build             Constructing wrapper function "dtrmm_wrap"...
453:info:build               dtrmm_wrap(a,b,[uplo,transa])
454:info:build             Constructing wrapper function "dtrsm_wrap"...
455:info:build               dtrsm_wrap(a,b,[uplo,transa,alpha])
456:info:build             Constructing wrapper function "dpotrf_wrap"...
457:info:build               info = dpotrf_wrap(a)
458:info:build             Constructing wrapper function "gp_array_logp"...
459:info:build               like = gp_array_logp(x,mu,sig,[overwrite_x,overwrite_mu])
460:info:build     Wrote C/API module "linalg_utils" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/linalg_utilsmodule.c"
461:info:build   adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources.
462:info:build   adding 'build/src.macosx-10.8-fat-2.5' to include_dirs.
463:info:build building extension "pymc.gp.incomplete_chol" sources
464:info:build f2py options: []
465:info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/incomplete_cholmodule.c
466:info:build Reading fortran codes...
467:info:build     Reading file 'pymc/gp/incomplete_chol.f' (format:fix,strict)
468:info:build Post-processing...
469:info:build     Block: incomplete_chol
470:info:build {}
471:info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_continue:unknown_interface:rowfun
472:info:build vars2fortran: No typespec for argument "itot".
473:info:build                     Block: ichol_continue
474:info:build {}
475:info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_continue:unknown_interface:rowfun
476:info:build vars2fortran: No typespec for argument "itot".
477:info:build                                     Block: rowfun
478:info:build                     Block: ichol
479:info:build                                     Block: rowfun
480:info:build {'attrspec': ['intent(hide)']}
481:info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_basis
482:info:build vars2fortran: No typespec for argument "n_nug".
483:info:build                     Block: ichol_basis
484:info:build                     Block: ichol_full
485:info:build Post-processing (stage 2)...
486:info:build Building modules...
487:info:build     Constructing call-back function "cb_rowfun_in_ichol_continue__user__routines"
488:info:build       def rowfun(itot,x,rowvec): return
489:info:build     Constructing call-back function "cb_rowfun_in_ichol__user__routines"
490:info:build       def rowfun(i,x,rowvec): return
491:info:build     Building module "incomplete_chol"...
492:info:build             Constructing wrapper function "ichol_continue"...
493:info:build               m,piv = ichol_continue(sig,diag,piv,reltol,x,rowfun,[overwrite_x,rowfun_extra_args])
494:info:build             Constructing wrapper function "ichol"...
495:info:build               sig,m,piv = ichol(diag,reltol,x,rowfun,[overwrite_x,rowfun_extra_args])
496:info:build             Constructing wrapper function "ichol_basis"...
497:info:build               sig,p,m = ichol_basis(basis,nug,reltol)
498:info:build             Constructing wrapper function "ichol_full"...
499:info:build               sig,m,p = ichol_full(c,reltol)
500:info:build     Wrote C/API module "incomplete_chol" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/incomplete_cholmodule.c"
501:info:build   adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources.
502:info:build   adding 'build/src.macosx-10.8-fat-2.5' to include_dirs.
503:info:build building extension "pymc.gp.cov_funs.isotropic_cov_funs" sources
504:info:build f2py options: []
505:info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funsmodule.c
506:info:build creating build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs
507:info:build Reading fortran codes...
508:info:build     Reading file 'pymc/gp/cov_funs/isotropic_cov_funs.f' (format:fix,strict)
509:info:build     Reading file 'blas/BLAS/dscal.f' (format:fix,strict)
510:info:build Post-processing...
511:info:build     Block: isotropic_cov_funs
512:info:build                     Block: imul
513:info:build                     Block: symmetrize
514:info:build                     Block: stein_spatiotemporal
515:info:build                     Block: matern
516:info:build                     Block: gaussian
517:info:build                     Block: exponential
518:info:build                     Block: brownian
519:info:build                     Block: frac_brownian
520:info:build                     Block: pow_exp
521:info:build                     Block: sphere
522:info:build                     Block: quadratic
523:info:build                     Block: dgamma
524:info:build                     Block: rkbesl
525:info:build                     Block: dscal
526:info:build Post-processing (stage 2)...
527:info:build Building modules...
528:info:build     Building module "isotropic_cov_funs"...
529:info:build             Constructing wrapper function "imul"...
530:info:build               imul(c,a,[cmin,cmax,symm])
531:info:build             Constructing wrapper function "symmetrize"...
532:info:build               symmetrize(c,[cmin,cmax])
533:info:build             Constructing wrapper function "stein_spatiotemporal"...
534:info:build               stein_spatiotemporal(c,gt,origin_val,[cmin,cmax,symm])
535:info:build             Constructing wrapper function "matern"...
536:info:build               matern(c,diff_degree,[cmin,cmax,symm])
537:info:build             Constructing wrapper function "gaussian"...
538:info:build               gaussian(c,[cmin,cmax,symm])
539:info:build             Constructing wrapper function "exponential"...
540:info:build               exponential(c,[cmin,cmax,symm])
541:info:build             Constructing wrapper function "brownian"...
542:info:build               brownian(c,x,y,[cmin,cmax,symm])
543:info:build             Constructing wrapper function "frac_brownian"...
544:info:build               frac_brownian(c,x,y,h,[cmin,cmax,symm])
545:info:build             Constructing wrapper function "pow_exp"...
546:info:build               pow_exp(c,pow,[cmin,cmax,symm])
547:info:build             Constructing wrapper function "sphere"...
548:info:build               sphere(c,[cmin,cmax,symm])
549:info:build             Constructing wrapper function "quadratic"...
550:info:build               quadratic(c,phi,[cmin,cmax,symm])
551:info:build             Creating wrapper for Fortran function "dgamma"("dgamma")...
552:info:build             Constructing wrapper function "dgamma"...
553:info:build               dgamma = dgamma(x)
554:info:build             Constructing wrapper function "rkbesl"...
555:info:build               rkbesl(x,alpha,nb,ize,bk,ncalc)
556:info:build             Constructing wrapper function "dscal"...
557:info:build getarrdims:warning: assumed shape array, using 0 instead of '*'
558:info:build               dscal(n,da,dx,incx)
559:info:build     Wrote C/API module "isotropic_cov_funs" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funsmodule.c"
560:info:build     Fortran 77 wrappers are saved to "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f"
561:info:build   adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources.
562:info:build   adding 'build/src.macosx-10.8-fat-2.5' to include_dirs.
563:info:build   adding 'build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f' to sources.
564:info:build building extension "pymc.gp.cov_funs.distances" sources
565:info:build f2py options: []
566:info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/distancesmodule.c
567:info:build Reading fortran codes...
568:info:build     Reading file 'pymc/gp/cov_funs/distances.f' (format:fix,strict)
569:info:build Post-processing...
570:info:build     Block: distances
571:info:build                     Block: euclidean
572:info:build                     Block: geographic
573:info:build                     Block: paniso_geo_rad
574:info:build                     Block: aniso_geo_rad
575:info:build Post-processing (stage 2)...
576:info:build Building modules...
577:info:build     Building module "distances"...
578:info:build             Constructing wrapper function "euclidean"...
579:info:build               euclidean(d,x,y,[cmin,cmax,symm])
580:info:build             Constructing wrapper function "geographic"...
581:info:build               geographic(d,x,y,[cmin,cmax,symm])
582:info:build             Constructing wrapper function "paniso_geo_rad"...
583:info:build               paniso_geo_rad(d,x,y,ctrs,scals,[cmin,cmax,symm])
584:info:build             Constructing wrapper function "aniso_geo_rad"...
585:info:build               aniso_geo_rad(d,x,y,inc,ecc,[cmin,cmax,symm])
586:info:build     Wrote C/API module "distances" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/distancesmodule.c"
587:info:build   adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources.
588:info:build   adding 'build/src.macosx-10.8-fat-2.5' to include_dirs.
589:info:build build_src: building npy-pkg config files
590:info:build running build_py
591:info:build creating build/lib.macosx-10.8-fat-2.5
592:info:build creating build/lib.macosx-10.8-fat-2.5/pymc
593:info:build copying pymc/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc
594:info:build copying pymc/CommonDeterministics.py -> build/lib.macosx-10.8-fat-2.5/pymc
595:info:build copying pymc/Container.py -> build/lib.macosx-10.8-fat-2.5/pymc
596:info:build copying pymc/decorators.py -> build/lib.macosx-10.8-fat-2.5/pymc
597:info:build copying pymc/diagnostics.py -> build/lib.macosx-10.8-fat-2.5/pymc
598:info:build copying pymc/distributions.py -> build/lib.macosx-10.8-fat-2.5/pymc
599:info:build copying pymc/graph.py -> build/lib.macosx-10.8-fat-2.5/pymc
600:info:build copying pymc/InstantiationDecorators.py -> build/lib.macosx-10.8-fat-2.5/pymc
601:info:build copying pymc/Matplot.py -> build/lib.macosx-10.8-fat-2.5/pymc
602:info:build copying pymc/MCMC.py -> build/lib.macosx-10.8-fat-2.5/pymc
603:info:build copying pymc/Model.py -> build/lib.macosx-10.8-fat-2.5/pymc
604:info:build copying pymc/Node.py -> build/lib.macosx-10.8-fat-2.5/pymc
605:info:build copying pymc/NormalApproximation.py -> build/lib.macosx-10.8-fat-2.5/pymc
606:info:build copying pymc/PyMCObjects.py -> build/lib.macosx-10.8-fat-2.5/pymc
607:info:build copying pymc/ScipyDistributions.py -> build/lib.macosx-10.8-fat-2.5/pymc
608:info:build copying pymc/StepMethods.py -> build/lib.macosx-10.8-fat-2.5/pymc
609:info:build copying pymc/utils.py -> build/lib.macosx-10.8-fat-2.5/pymc
610:info:build creating build/lib.macosx-10.8-fat-2.5/pymc/database
611:info:build copying pymc/database/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
612:info:build copying pymc/database/base.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
613:info:build copying pymc/database/hdf5.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
614:info:build copying pymc/database/mysql.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
615:info:build copying pymc/database/no_trace.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
616:info:build copying pymc/database/pickle.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
617:info:build copying pymc/database/ram.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
618:info:build copying pymc/database/sqlite.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
619:info:build copying pymc/database/txt.py -> build/lib.macosx-10.8-fat-2.5/pymc/database
620:info:build creating build/lib.macosx-10.8-fat-2.5/pymc/examples
621:info:build copying pymc/examples/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
622:info:build copying pymc/examples/custom_step.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
623:info:build copying pymc/examples/DisasterModel.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
624:info:build copying pymc/examples/gelman_bioassay.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
625:info:build copying pymc/examples/model_1.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
626:info:build copying pymc/examples/model_1_gof.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
627:info:build copying pymc/examples/model_1_missing.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
628:info:build copying pymc/examples/model_2.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
629:info:build copying pymc/examples/model_3.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
630:info:build copying pymc/examples/straightlinefit.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
631:info:build copying pymc/examples/weibull_fit.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples
632:info:build creating build/lib.macosx-10.8-fat-2.5/pymc/tests
633:info:build copying pymc/tests/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
634:info:build copying pymc/tests/check_dependencies.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
635:info:build copying pymc/tests/objectmodel.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
636:info:build copying pymc/tests/screen.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
637:info:build copying pymc/tests/test_adaptive.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
638:info:build copying pymc/tests/test_AM.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
639:info:build copying pymc/tests/test_basiscov.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
640:info:build copying pymc/tests/test_binary_step.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
641:info:build copying pymc/tests/test_container.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
642:info:build copying pymc/tests/test_convergence.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
643:info:build copying pymc/tests/test_cov.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
644:info:build copying pymc/tests/test_database.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
645:info:build copying pymc/tests/test_distributions.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
646:info:build copying pymc/tests/test_GP_MCMC.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
647:info:build copying pymc/tests/test_graph.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
648:info:build copying pymc/tests/test_instantiation.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
649:info:build copying pymc/tests/test_interactive.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
650:info:build copying pymc/tests/test_LazyFunction.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
651:info:build copying pymc/tests/test_MCMCSampler.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
652:info:build copying pymc/tests/test_mean.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
653:info:build copying pymc/tests/test_norm_approx.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
654:info:build copying pymc/tests/test_observation.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
655:info:build copying pymc/tests/test_realization.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests
656:info:build creating build/lib.macosx-10.8-fat-2.5/pymc/gp
657:info:build copying pymc/gp/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
658:info:build copying pymc/gp/BasisCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
659:info:build copying pymc/gp/Covariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
660:info:build copying pymc/gp/FullRankCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
661:info:build copying pymc/gp/gpplots.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
662:info:build copying pymc/gp/GPutils.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
663:info:build copying pymc/gp/Mean.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
664:info:build copying pymc/gp/NearlyFullRankCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
665:info:build copying pymc/gp/PyMC_objects.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
666:info:build copying pymc/gp/Realization.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp
667:info:build creating build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
668:info:build copying pymc/gp/cov_funs/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
669:info:build copying pymc/gp/cov_funs/bases.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
670:info:build copying pymc/gp/cov_funs/brownian.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
671:info:build copying pymc/gp/cov_funs/cov_utils.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
672:info:build copying pymc/gp/cov_funs/wrapped_distances.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs
673:info:build running build_ext
674:info:build customize UnixCCompiler
675:info:build customize UnixCCompiler using build_ext
676:info:build customize NAGFCompiler
677:info:build Found executable /opt/local/bin/gfortran-mp-4.7
678:info:build customize AbsoftFCompiler
679:info:build customize IBMFCompiler
680:info:build Could not locate executable xlf95
681:info:build customize IntelFCompiler
682:info:build Could not locate executable ifort
683:info:build Could not locate executable ifc
684:info:build customize GnuFCompiler
685:info:build gnu: no Fortran 90 compiler found
686:info:build Could not locate executable g77
687:info:build Could not locate executable f77
688:info:build gnu: no Fortran 90 compiler found
689:info:build customize Gnu95FCompiler
690:info:build Could not locate executable gfortran
691:info:build Could not locate executable f95
692:info:build customize Gnu95FCompiler
693:info:build customize Gnu95FCompiler using build_ext
694:info:build building 'pymc.flib' extension
695:info:build compiling C sources
696:info:build C compiler: /usr/bin/clang -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -arch x86_64
697:info:build
698:info:build creating build/temp.macosx-10.8-fat-2.5
699:info:build creating build/temp.macosx-10.8-fat-2.5/build
700:info:build creating build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5
701:info:build creating build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc
702:info:build compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.8-fat-2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c'
703:info:build extra options: '-msse3'
704:info:build clang: build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c
705:info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:7949:13: warning: array index 2 is past the end of the array (which contains 2 elements) [-Warray-bounds]
706:info:build   d = shape(x,2);
707:info:build             ^ ~
708:info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:85:24: note: expanded from macro 'shape'
709:info:build #define shape(var,dim) var ## _Dims[dim]
710:info:build                        ^
711:info:build <scratch space>:272:1: note: expanded from macro 'x'
712:info:build x_Dims
713:info:build ^
714:info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:7850:3: note: array 'x_Dims' declared here
715:info:build   npy_intp x_Dims[2] = {-1, -1};
716:info:build   ^
717:info:build 1 warning generated.
718:info:build clang: build/src.macosx-10.8-fat-2.5/fortranobject.c
719:info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
720:info:build         if ((fp->defs[i].func==NULL)) {
721:info:build              ~~~~~~~~~~~~~~~~^~~~~~
722:info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: note: remove extraneous parentheses around the comparison to silence this warning
723:info:build         if ((fp->defs[i].func==NULL)) {
724:info:build             ~                ^     ~
725:info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: note: use '=' to turn this equality comparison into an assignment
726:info:build         if ((fp->defs[i].func==NULL)) {
727:info:build                              ^~
728:info:build                              =
729:info:build 1 warning generated.
730:info:build compiling Fortran sources
731:info:build Fortran f77 compiler: /opt/local/bin/gfortran-mp-4.7 -Wall -ffixed-form -fno-second-underscore -m64 -O3 -funroll-loops
732:info:build Fortran f90 compiler: /opt/local/bin/gfortran-mp-4.7 -m64 -m64 -O3 -funroll-loops
733:info:build Fortran fix compiler: /opt/local/bin/gfortran-mp-4.7 -Wall -ffixed-form -fno-second-underscore -m64 -m64 -O3 -funroll-loops
734:info:build creating build/temp.macosx-10.8-fat-2.5/pymc
735:info:build compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.8-fat-2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c'
736:info:build gfortran-mp-4.7:f77: pymc/flib.f
737:info:build pymc/flib.f:376.13:
738:info:build
739:info:build         t1 = dexp(-z(i)**cc)                                           
740:info:build              1
741:info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
742:info:build pymc/flib.f:1999.15:
743:info:build
744:info:build           PI = ABS(A(INDX(I),J))/C(INDX(I))                             
745:info:build                1
746:info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
747:info:build pymc/flib.f:2013.16:
748:info:build
749:info:build           PJ  = A(INDX(I),J)/A(INDX(J),J)                               
750:info:build                 1
751:info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
752:info:build pymc/flib.f:2259.31:
753:info:build
754:info:build       DOUBLE PRECISION p(k),val,like                                   
755:info:build                                1
756:info:build Warning: Unused variable 'val' declared at (1)
757:info:build pymc/flib.f: In function 'uniform':
758:info:build pymc/flib.f:2194:0: warning: 'z' is used uninitialized in this function [-Wuninitialized]
759:info:build pymc/flib.f: In function 'elgs':
760:info:build pymc/flib.f:2002:0: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized]
761:info:build gfortran-mp-4.7:f77: pymc/histogram.f
762:info:build gfortran-mp-4.7:f77: pymc/flib_blas.f
763:info:build gfortran-mp-4.7:f77: pymc/math.f
764:info:build pymc/math.f:395.6:
765:info:build
766:info:build       DOUBLE PRECISION FUNCTION DERF(X)                                 
767:info:build       1
768:info:build Warning: 'derf' declared at (1) is also the name of an intrinsic.  It can only be called via an explicit interface or if declared EXTERNAL.
769:info:build pymc/math.f:416.6:
770:info:build
771:info:build       DOUBLE PRECISION FUNCTION DERFC(X)                               
772:info:build       1
773:info:build Warning: 'derfc' declared at (1) is also the name of an intrinsic.  It can only be called via an explicit interface or if declared EXTERNAL.
774:info:build gfortran-mp-4.7:f77: pymc/gibbsit.f
775:info:build pymc/gibbsit.f:2159.5:
776:info:build
777:info:build   215 IF (R .GT. .5898437) GO TO 220                                   
778:info:build      1
779:info:build Warning: Label 215 at (1) defined but not used
780:info:build pymc/gibbsit.f:2076.5:
781:info:build
782:info:build   115 IF (R .GT. .5898437) GO TO 120                                   
783:info:build      1
784:info:build Warning: Label 115 at (1) defined but not used
785:info:build pymc/gibbsit.f:2063.5:
786:info:build
787:info:build    15 IF (KFLAG.GE.1) GO TO 30                                         
788:info:build      1
789:info:build Warning: Label 15 at (1) defined but not used
790:info:build pymc/gibbsit.f:1203.48:
791:info:build
792:info:build         cutpt = empquant(original,iteracnt,qhat,work)                   
793:info:build                                                 1
794:info:build Warning: Type mismatch in argument 'work' at (1); passed INTEGER(4) to REAL(8)
795:info:build gfortran-mp-4.7:f77: build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f
796:info:build /opt/local/bin/gfortran-mp-4.7 -Wall -arch x86_64 build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flibmodule.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/fortranobject.o build/temp.macosx-10.8-fat-2.5/pymc/flib.o build/temp.macosx-10.8-fat-2.5/pymc/histogram.o build/temp.macosx-10.8-fat-2.5/pymc/flib_blas.o build/temp.macosx-10.8-fat-2.5/pymc/math.o build/temp.macosx-10.8-fat-2.5/pymc/gibbsit.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.o -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -lgfortran -o build/lib.macosx-10.8-fat-2.5/pymc/flib.so -Wl,-framework -Wl,Accelerate
797:info:build Undefined symbols for architecture x86_64:
798:info:build   "_PyArg_ParseTupleAndKeywords", referenced from:
799:info:build       _f2py_rout_flib_logsum in flibmodule.o
800:info:build       _f2py_rout_flib_combinationln in flibmodule.o
801:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
802:info:build       _f2py_rout_flib_standardize in flibmodule.o
803:info:build       _f2py_rout_flib_gammln in flibmodule.o
804:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
805:info:build       _f2py_rout_flib_factrl in flibmodule.o
806:info:build       ...
807:info:build   "_PyCObject_AsVoidPtr", referenced from:
808:info:build       _initflib in flibmodule.o
809:info:build       _F2PyCapsule_AsVoidPtr in fortranobject.o
810:info:build   "_PyCObject_FromVoidPtr", referenced from:
811:info:build       _fortran_getattr in fortranobject.o
812:info:build       _F2PyCapsule_FromVoidPtr in fortranobject.o
813:info:build   "_PyCObject_Type", referenced from:
814:info:build       _initflib in flibmodule.o
815:info:build       _F2PyCapsule_Check in fortranobject.o
816:info:build   "_PyComplex_Type", referenced from:
817:info:build       _int_from_pyobj in flibmodule.o
818:info:build       _double_from_pyobj in flibmodule.o
819:info:build   "_PyDict_DelItemString", referenced from:
820:info:build       _fortran_setattr in fortranobject.o
821:info:build   "_PyDict_GetItemString", referenced from:
822:info:build       _initflib in flibmodule.o
823:info:build       _fortran_getattr in fortranobject.o
824:info:build   "_PyDict_New", referenced from:
825:info:build       _PyFortranObject_New in fortranobject.o
826:info:build       _PyFortranObject_NewAsAttr in fortranobject.o
827:info:build       _fortran_setattr in fortranobject.o
828:info:build   "_PyDict_SetItemString", referenced from:
829:info:build       _initflib in flibmodule.o
830:info:build       _F2PyDict_SetItemString in fortranobject.o
831:info:build       _PyFortranObject_New in fortranobject.o
832:info:build       _fortran_getattr in fortranobject.o
833:info:build       _fortran_setattr in fortranobject.o
834:info:build   "_PyErr_Clear", referenced from:
835:info:build       _int_from_pyobj in flibmodule.o
836:info:build       _double_from_pyobj in flibmodule.o
837:info:build       _F2PyDict_SetItemString in fortranobject.o
838:info:build       _fortran_repr in fortranobject.o
839:info:build   "_PyErr_Format", referenced from:
840:info:build       _initflib in flibmodule.o
841:info:build       _fortran_call in fortranobject.o
842:info:build   "_PyErr_NewException", referenced from:
843:info:build       _initflib in flibmodule.o
844:info:build   "_PyErr_Occurred", referenced from:
845:info:build       _initflib in flibmodule.o
846:info:build       _f2py_rout_flib_logsum in flibmodule.o
847:info:build       _f2py_rout_flib_combinationln in flibmodule.o
848:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
849:info:build       _f2py_rout_flib_standardize in flibmodule.o
850:info:build       _f2py_rout_flib_gammln in flibmodule.o
851:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
852:info:build       ...
853:info:build   "_PyErr_Print", referenced from:
854:info:build       _initflib in flibmodule.o
855:info:build       _F2PyDict_SetItemString in fortranobject.o
856:info:build   "_PyErr_SetString", referenced from:
857:info:build       _initflib in flibmodule.o
858:info:build       _f2py_rout_flib_logsum in flibmodule.o
859:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
860:info:build       _f2py_rout_flib_standardize in flibmodule.o
861:info:build       _f2py_rout_flib_rskewnorm in flibmodule.o
862:info:build       _f2py_rout_flib_uniform_like in flibmodule.o
863:info:build       _f2py_rout_flib_duniform_like in flibmodule.o
864:info:build       ...
865:info:build   "_PyExc_AttributeError", referenced from:
866:info:build       _initflib in flibmodule.o
867:info:build       _fortran_setattr in fortranobject.o
868:info:build   "_PyExc_ImportError", referenced from:
869:info:build       _initflib in flibmodule.o
870:info:build   "_PyExc_MemoryError", referenced from:
871:info:build       _string_from_pyobj in flibmodule.o
872:info:build   "_PyExc_RuntimeError", referenced from:
873:info:build       _initflib in flibmodule.o
874:info:build       _fortran_call in fortranobject.o
875:info:build   "_PyExc_TypeError", referenced from:
876:info:build       _fortran_call in fortranobject.o
877:info:build       _array_from_pyobj in fortranobject.o
878:info:build   "_PyExc_ValueError", referenced from:
879:info:build       _string_from_pyobj in flibmodule.o
880:info:build       _array_from_pyobj in fortranobject.o
881:info:build   "_PyFloat_Type", referenced from:
882:info:build       _double_from_pyobj in flibmodule.o
883:info:build   "_PyImport_ImportModule", referenced from:
884:info:build       _initflib in flibmodule.o
885:info:build   "_PyInt_Type", referenced from:
886:info:build       _int_from_pyobj in flibmodule.o
887:info:build   "_PyMem_Free", referenced from:
888:info:build       _fortran_dealloc in fortranobject.o
889:info:build   "_PyModule_GetDict", referenced from:
890:info:build       _initflib in flibmodule.o
891:info:build   "_PyNumber_Float", referenced from:
892:info:build       _double_from_pyobj in flibmodule.o
893:info:build   "_PyNumber_Int", referenced from:
894:info:build       _int_from_pyobj in flibmodule.o
895:info:build   "_PyObject_GetAttrString", referenced from:
896:info:build       _initflib in flibmodule.o
897:info:build       _int_from_pyobj in flibmodule.o
898:info:build       _double_from_pyobj in flibmodule.o
899:info:build       _fortran_repr in fortranobject.o
900:info:build   "_PyObject_IsTrue", referenced from:
901:info:build       _f2py_rout_flib_constrain in flibmodule.o
902:info:build   "_PyObject_SetAttrString", referenced from:
903:info:build       _initflib in flibmodule.o
904:info:build   "_PyObject_Str", referenced from:
905:info:build       _string_from_pyobj in flibmodule.o
906:info:build       _array_from_pyobj in fortranobject.o
907:info:build   "_PyObject_Type", referenced from:
908:info:build       _array_from_pyobj in fortranobject.o
909:info:build   "_PySequence_Check", referenced from:
910:info:build       _int_from_pyobj in flibmodule.o
911:info:build       _double_from_pyobj in flibmodule.o
912:info:build   "_PySequence_GetItem", referenced from:
913:info:build       _int_from_pyobj in flibmodule.o
914:info:build       _double_from_pyobj in flibmodule.o
915:info:build   "_PyString_AsString", referenced from:
916:info:build       _fortran_repr in fortranobject.o
917:info:build       _array_from_pyobj in fortranobject.o
918:info:build   "_PyString_ConcatAndDel", referenced from:
919:info:build       _fortran_getattr in fortranobject.o
920:info:build   "_PyString_FromFormat", referenced from:
921:info:build       _fortran_repr in fortranobject.o
922:info:build   "_PyString_FromString", referenced from:
923:info:build       _initflib in flibmodule.o
924:info:build       _fortran_getattr in fortranobject.o
925:info:build       _fortran_repr in fortranobject.o
926:info:build   "_PyString_Type", referenced from:
927:info:build       _int_from_pyobj in flibmodule.o
928:info:build       _double_from_pyobj in flibmodule.o
929:info:build       _string_from_pyobj in flibmodule.o
930:info:build       _fortran_repr in fortranobject.o
931:info:build   "_PyType_IsSubtype", referenced from:
932:info:build       _int_from_pyobj in flibmodule.o
933:info:build       _double_from_pyobj in flibmodule.o
934:info:build       _string_from_pyobj in flibmodule.o
935:info:build       _fortran_repr in fortranobject.o
936:info:build       _array_from_pyobj in fortranobject.o
937:info:build   "_PyType_Type", referenced from:
938:info:build       _initflib in flibmodule.o
939:info:build   "_PyUnicode_Type", referenced from:
940:info:build       _int_from_pyobj in flibmodule.o
941:info:build       _double_from_pyobj in flibmodule.o
942:info:build   "_Py_BuildValue", referenced from:
943:info:build       _f2py_rout_flib_logsum in flibmodule.o
944:info:build       _f2py_rout_flib_combinationln in flibmodule.o
945:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
946:info:build       _f2py_rout_flib_standardize in flibmodule.o
947:info:build       _f2py_rout_flib_gammln in flibmodule.o
948:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
949:info:build       _f2py_rout_flib_factrl in flibmodule.o
950:info:build       ...
951:info:build   "_Py_FindMethod", referenced from:
952:info:build       _fortran_getattr in fortranobject.o
953:info:build   "_Py_InitModule4_64", referenced from:
954:info:build       _initflib in flibmodule.o
955:info:build   "__PyObject_New", referenced from:
956:info:build       _PyFortranObject_New in fortranobject.o
957:info:build       _PyFortranObject_NewAsAttr in fortranobject.o
958:info:build   "__Py_NoneStruct", referenced from:
959:info:build       _f2py_rout_flib_logsum in flibmodule.o
960:info:build       _f2py_rout_flib_combinationln in flibmodule.o
961:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
962:info:build       _f2py_rout_flib_standardize in flibmodule.o
963:info:build       _f2py_rout_flib_gammln in flibmodule.o
964:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
965:info:build       _f2py_rout_flib_factrl in flibmodule.o
966:info:build       ...
967:info:build ld: symbol(s) not found for architecture x86_64
968:info:build collect2: error: ld returned 1 exit status
969:info:build Undefined symbols for architecture x86_64:
970:info:build   "_PyArg_ParseTupleAndKeywords", referenced from:
971:info:build       _f2py_rout_flib_logsum in flibmodule.o
972:info:build       _f2py_rout_flib_combinationln in flibmodule.o
973:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
974:info:build       _f2py_rout_flib_standardize in flibmodule.o
975:info:build       _f2py_rout_flib_gammln in flibmodule.o
976:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
977:info:build       _f2py_rout_flib_factrl in flibmodule.o
978:info:build       ...
979:info:build   "_PyCObject_AsVoidPtr", referenced from:
980:info:build       _initflib in flibmodule.o
981:info:build       _F2PyCapsule_AsVoidPtr in fortranobject.o
982:info:build   "_PyCObject_FromVoidPtr", referenced from:
983:info:build       _fortran_getattr in fortranobject.o
984:info:build       _F2PyCapsule_FromVoidPtr in fortranobject.o
985:info:build   "_PyCObject_Type", referenced from:
986:info:build       _initflib in flibmodule.o
987:info:build       _F2PyCapsule_Check in fortranobject.o
988:info:build   "_PyComplex_Type", referenced from:
989:info:build       _int_from_pyobj in flibmodule.o
990:info:build       _double_from_pyobj in flibmodule.o
991:info:build   "_PyDict_DelItemString", referenced from:
992:info:build       _fortran_setattr in fortranobject.o
993:info:build   "_PyDict_GetItemString", referenced from:
994:info:build       _initflib in flibmodule.o
995:info:build       _fortran_getattr in fortranobject.o
996:info:build   "_PyDict_New", referenced from:
997:info:build       _PyFortranObject_New in fortranobject.o
998:info:build       _PyFortranObject_NewAsAttr in fortranobject.o
999:info:build       _fortran_setattr in fortranobject.o
1000:info:build   "_PyDict_SetItemString", referenced from:
1001:info:build       _initflib in flibmodule.o
1002:info:build       _F2PyDict_SetItemString in fortranobject.o
1003:info:build       _PyFortranObject_New in fortranobject.o
1004:info:build       _fortran_getattr in fortranobject.o
1005:info:build       _fortran_setattr in fortranobject.o
1006:info:build   "_PyErr_Clear", referenced from:
1007:info:build       _int_from_pyobj in flibmodule.o
1008:info:build       _double_from_pyobj in flibmodule.o
1009:info:build       _F2PyDict_SetItemString in fortranobject.o
1010:info:build       _fortran_repr in fortranobject.o
1011:info:build   "_PyErr_Format", referenced from:
1012:info:build       _initflib in flibmodule.o
1013:info:build       _fortran_call in fortranobject.o
1014:info:build   "_PyErr_NewException", referenced from:
1015:info:build       _initflib in flibmodule.o
1016:info:build   "_PyErr_Occurred", referenced from:
1017:info:build       _initflib in flibmodule.o
1018:info:build       _f2py_rout_flib_logsum in flibmodule.o
1019:info:build       _f2py_rout_flib_combinationln in flibmodule.o
1020:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
1021:info:build       _f2py_rout_flib_standardize in flibmodule.o
1022:info:build       _f2py_rout_flib_gammln in flibmodule.o
1023:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
1024:info:build       ...
1025:info:build   "_PyErr_Print", referenced from:
1026:info:build       _initflib in flibmodule.o
1027:info:build       _F2PyDict_SetItemString in fortranobject.o
1028:info:build   "_PyErr_SetString", referenced from:
1029:info:build       _initflib in flibmodule.o
1030:info:build       _f2py_rout_flib_logsum in flibmodule.o
1031:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
1032:info:build       _f2py_rout_flib_standardize in flibmodule.o
1033:info:build       _f2py_rout_flib_rskewnorm in flibmodule.o
1034:info:build       _f2py_rout_flib_uniform_like in flibmodule.o
1035:info:build       _f2py_rout_flib_duniform_like in flibmodule.o
1036:info:build       ...
1037:info:build   "_PyExc_AttributeError", referenced from:
1038:info:build       _initflib in flibmodule.o
1039:info:build       _fortran_setattr in fortranobject.o
1040:info:build   "_PyExc_ImportError", referenced from:
1041:info:build       _initflib in flibmodule.o
1042:info:build   "_PyExc_MemoryError", referenced from:
1043:info:build       _string_from_pyobj in flibmodule.o
1044:info:build   "_PyExc_RuntimeError", referenced from:
1045:info:build       _initflib in flibmodule.o
1046:info:build       _fortran_call in fortranobject.o
1047:info:build   "_PyExc_TypeError", referenced from:
1048:info:build       _fortran_call in fortranobject.o
1049:info:build       _array_from_pyobj in fortranobject.o
1050:info:build   "_PyExc_ValueError", referenced from:
1051:info:build       _string_from_pyobj in flibmodule.o
1052:info:build       _array_from_pyobj in fortranobject.o
1053:info:build   "_PyFloat_Type", referenced from:
1054:info:build       _double_from_pyobj in flibmodule.o
1055:info:build   "_PyImport_ImportModule", referenced from:
1056:info:build       _initflib in flibmodule.o
1057:info:build   "_PyInt_Type", referenced from:
1058:info:build       _int_from_pyobj in flibmodule.o
1059:info:build   "_PyMem_Free", referenced from:
1060:info:build       _fortran_dealloc in fortranobject.o
1061:info:build   "_PyModule_GetDict", referenced from:
1062:info:build       _initflib in flibmodule.o
1063:info:build   "_PyNumber_Float", referenced from:
1064:info:build       _double_from_pyobj in flibmodule.o
1065:info:build   "_PyNumber_Int", referenced from:
1066:info:build       _int_from_pyobj in flibmodule.o
1067:info:build   "_PyObject_GetAttrString", referenced from:
1068:info:build       _initflib in flibmodule.o
1069:info:build       _int_from_pyobj in flibmodule.o
1070:info:build       _double_from_pyobj in flibmodule.o
1071:info:build       _fortran_repr in fortranobject.o
1072:info:build   "_PyObject_IsTrue", referenced from:
1073:info:build       _f2py_rout_flib_constrain in flibmodule.o
1074:info:build   "_PyObject_SetAttrString", referenced from:
1075:info:build       _initflib in flibmodule.o
1076:info:build   "_PyObject_Str", referenced from:
1077:info:build       _string_from_pyobj in flibmodule.o
1078:info:build       _array_from_pyobj in fortranobject.o
1079:info:build   "_PyObject_Type", referenced from:
1080:info:build       _array_from_pyobj in fortranobject.o
1081:info:build   "_PySequence_Check", referenced from:
1082:info:build       _int_from_pyobj in flibmodule.o
1083:info:build       _double_from_pyobj in flibmodule.o
1084:info:build   "_PySequence_GetItem", referenced from:
1085:info:build       _int_from_pyobj in flibmodule.o
1086:info:build       _double_from_pyobj in flibmodule.o
1087:info:build   "_PyString_AsString", referenced from:
1088:info:build       _fortran_repr in fortranobject.o
1089:info:build       _array_from_pyobj in fortranobject.o
1090:info:build   "_PyString_ConcatAndDel", referenced from:
1091:info:build       _fortran_getattr in fortranobject.o
1092:info:build   "_PyString_FromFormat", referenced from:
1093:info:build       _fortran_repr in fortranobject.o
1094:info:build   "_PyString_FromString", referenced from:
1095:info:build       _initflib in flibmodule.o
1096:info:build       _fortran_getattr in fortranobject.o
1097:info:build       _fortran_repr in fortranobject.o
1098:info:build   "_PyString_Type", referenced from:
1099:info:build       _int_from_pyobj in flibmodule.o
1100:info:build       _double_from_pyobj in flibmodule.o
1101:info:build       _string_from_pyobj in flibmodule.o
1102:info:build       _fortran_repr in fortranobject.o
1103:info:build   "_PyType_IsSubtype", referenced from:
1104:info:build       _int_from_pyobj in flibmodule.o
1105:info:build       _double_from_pyobj in flibmodule.o
1106:info:build       _string_from_pyobj in flibmodule.o
1107:info:build       _fortran_repr in fortranobject.o
1108:info:build       _array_from_pyobj in fortranobject.o
1109:info:build   "_PyType_Type", referenced from:
1110:info:build       _initflib in flibmodule.o
1111:info:build   "_PyUnicode_Type", referenced from:
1112:info:build       _int_from_pyobj in flibmodule.o
1113:info:build       _double_from_pyobj in flibmodule.o
1114:info:build   "_Py_BuildValue", referenced from:
1115:info:build       _f2py_rout_flib_logsum in flibmodule.o
1116:info:build       _f2py_rout_flib_combinationln in flibmodule.o
1117:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
1118:info:build       _f2py_rout_flib_standardize in flibmodule.o
1119:info:build       _f2py_rout_flib_gammln in flibmodule.o
1120:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
1121:info:build       _f2py_rout_flib_factrl in flibmodule.o
1122:info:build       ...
1123:info:build   "_Py_FindMethod", referenced from:
1124:info:build       _fortran_getattr in fortranobject.o
1125:info:build   "_Py_InitModule4_64", referenced from:
1126:info:build       _initflib in flibmodule.o
1127:info:build   "__PyObject_New", referenced from:
1128:info:build       _PyFortranObject_New in fortranobject.o
1129:info:build       _PyFortranObject_NewAsAttr in fortranobject.o
1130:info:build   "__Py_NoneStruct", referenced from:
1131:info:build       _f2py_rout_flib_logsum in flibmodule.o
1132:info:build       _f2py_rout_flib_combinationln in flibmodule.o
1133:info:build       _f2py_rout_flib_expand_triangular in flibmodule.o
1134:info:build       _f2py_rout_flib_standardize in flibmodule.o
1135:info:build       _f2py_rout_flib_gammln in flibmodule.o
1136:info:build       _f2py_rout_flib_mvgammln in flibmodule.o
1137:info:build       _f2py_rout_flib_factrl in flibmodule.o
1138:info:build       ...
1139:info:build ld: symbol(s) not found for architecture x86_64
1140:info:build collect2: error: ld returned 1 exit status
1141:info:build error: Command "/opt/local/bin/gfortran-mp-4.7 -Wall -arch x86_64 build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flibmodule.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/fortranobject.o build/temp.macosx-10.8-fat-2.5/pymc/flib.o build/temp.macosx-10.8-fat-2.5/pymc/histogram.o build/temp.macosx-10.8-fat-2.5/pymc/flib_blas.o build/temp.macosx-10.8-fat-2.5/pymc/math.o build/temp.macosx-10.8-fat-2.5/pymc/gibbsit.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.o -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -lgfortran -o build/lib.macosx-10.8-fat-2.5/pymc/flib.so -Wl,-framework -Wl,Accelerate" failed with exit status 1
1142:info:build Command failed:  cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build
1143:info:build Exit code: 1
1144:error:build org.macports.build for port py25-pymc returned: command execution failed
1145:debug:build Error code: CHILDSTATUS 19558 1
1146:debug:build Backtrace: command execution failed
1147    while executing
1148"system -nice 10 $fullcmdstring"
1149    ("eval" body line 1)
1150    invoked from within
1151"eval system $notty $nice \$fullcmdstring"
1152    invoked from within
1153"command_exec build"
1154    (procedure "portbuild::build_main" line 8)
1155    invoked from within
1156"$procedure $targetname"
1157:info:build Warning: targets not executed for py25-pymc: org.macports.build
1158:notice:build Please see the log file for port py25-pymc for details:
1159    /opt/local/var/macports/logs/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/main.log