1 | version:1 |
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2 | :msg:main ---> Computing dependencies for py25-pymc:msg:main |
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3 | :debug:main Searching for dependency: unzip |
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4 | :debug:main Found Dependency: receipt exists for unzip |
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5 | :debug:main Searching for dependency: python25 |
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6 | :debug:main Found Dependency: receipt exists for python25 |
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7 | :debug:main Searching for dependency: py25-numpy |
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8 | :debug:main Found Dependency: receipt exists for py25-numpy |
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9 | :debug:main Searching for dependency: gcc47 |
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10 | :debug:main Found Dependency: receipt exists for gcc47 |
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11 | :debug:main Executing org.macports.main (py25-pymc) |
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12 | :debug:main changing euid/egid - current euid: 0 - current egid: 0 |
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13 | :debug:main egid changed to: 528 |
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14 | :debug:main euid changed to: 501 |
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15 | :debug:fetch fetch phase started at Fri Mar 22 05:31:47 CDT 2013 |
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16 | :notice:fetch ---> Fetching distfiles for py25-pymc |
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17 | :debug:fetch Executing org.macports.fetch (py25-pymc) |
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18 | :info:fetch ---> pymc-2.0.zip doesn't seem to exist in /opt/local/var/macports/distfiles/python |
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19 | :notice:fetch ---> Attempting to fetch pymc-2.0.zip from http://distfiles.macports.org/python |
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20 | :debug:fetch Privilege de-escalation not attempted as not running as root. |
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21 | :debug:checksum checksum phase started at Fri Mar 22 05:32:09 CDT 2013 |
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22 | :notice:checksum ---> Verifying checksum(s) for py25-pymc |
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23 | :debug:checksum Executing org.macports.checksum (py25-pymc) |
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24 | :info:checksum ---> Checksumming pymc-2.0.zip |
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25 | :debug:checksum Correct (md5) checksum for pymc-2.0.zip |
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26 | :debug:checksum Correct (sha1) checksum for pymc-2.0.zip |
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27 | :debug:checksum Correct (rmd160) checksum for pymc-2.0.zip |
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28 | :debug:checksum Privilege de-escalation not attempted as not running as root. |
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29 | :debug:extract extract phase started at Fri Mar 22 05:32:09 CDT 2013 |
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30 | :notice:extract ---> Extracting py25-pymc |
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31 | :debug:extract setting option extract.cmd to /usr/bin/unzip |
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32 | :debug:extract setting option extract.pre_args to -q |
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33 | :debug:extract setting option extract.post_args to {-d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work} |
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34 | :debug:extract Executing org.macports.extract (py25-pymc) |
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35 | :info:extract ---> Extracting pymc-2.0.zip |
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36 | :debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/python/pymc-2.0.zip' |
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37 | :debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8' |
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38 | :debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work" && /usr/bin/unzip -q '/opt/local/var/macports/distfiles/python/pymc-2.0.zip' -d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work' |
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39 | :debug:extract Executing command line: cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work" && /usr/bin/unzip -q '/opt/local/var/macports/distfiles/python/pymc-2.0.zip' -d /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work |
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40 | :debug:extract euid/egid changed to: 0/0 |
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41 | :debug:extract chowned /opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work to macports |
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42 | :debug:extract euid/egid changed to: 501/528 |
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43 | :debug:extract Privilege de-escalation not attempted as not running as root. |
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44 | :debug:patch patch phase started at Fri Mar 22 05:32:09 CDT 2013 |
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45 | :debug:patch Executing org.macports.patch (py25-pymc) |
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46 | :notice:patch ---> Applying patches to py25-pymc |
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47 | :info:patch ---> Applying patch-pymc-gibbsit.f.diff |
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48 | :debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8' |
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49 | :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /usr/bin/patch -p0' |
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50 | :debug:patch Executing command line: cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /usr/bin/patch -p0 < '/Users/rschmidt/macports/dports/python/py25-pymc/files/patch-pymc-gibbsit.f.diff' |
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51 | :info:patch patching file pymc/gibbsit.f |
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52 | :debug:patch Privilege de-escalation not attempted as not running as root. |
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53 | :debug:configure configure phase started at Fri Mar 22 05:32:09 CDT 2013 |
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54 | :notice:configure ---> Configuring py25-pymc |
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55 | :debug:configure Using compiler 'Mac OS X Clang' |
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56 | :debug:configure Executing org.macports.configure (py25-pymc) |
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57 | :debug:configure Privilege de-escalation not attempted as not running as root. |
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58 | :debug:build build phase started at Fri Mar 22 05:32:09 CDT 2013 |
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59 | :notice:build ---> Building py25-pymc |
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60 | :debug:build Executing proc-pre-org.macports.build-build-0 |
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61 | :debug:build Executing org.macports.build (py25-pymc) |
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62 | :debug:build Environment: CPATH='/opt/local/include' CFLAGS='-arch x86_64' CXXFLAGS='-arch x86_64' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.8' F90FLAGS='-m64' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/.CC_PRINT_OPTIONS' LDFLAGS='-arch x86_64' FCFLAGS='-m64' F90='/opt/local/bin/gfortran-mp-4.7' OBJCFLAGS='-arch x86_64' FFLAGS='-m64' F77='/opt/local/bin/gfortran-mp-4.7' CC_PRINT_OPTIONS='YES' |
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63 | :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build' |
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64 | :debug:build Executing command line: cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build |
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65 | :info:build running build |
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66 | :info:build running config_cc |
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67 | :info:build unifing config_cc, config, build_clib, build_ext, build commands --compiler options |
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68 | :info:build running config_fc |
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69 | :info:build unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options |
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70 | :info:build running build_src |
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71 | :info:build build_src |
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72 | :info:build building extension "pymc.flib" sources |
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73 | :info:build f2py options: ['skip:ppnd7'] |
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74 | :info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c |
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75 | :info:build creating build |
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76 | :info:build creating build/src.macosx-10.8-fat-2.5 |
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77 | :info:build creating build/src.macosx-10.8-fat-2.5/pymc |
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78 | :info:build IOError: [Errno 2] No such file or directory: 'skip:ppnd7'. Skipping file "skip:ppnd7". |
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79 | :info:build updatevars:p: attempt to change 'dimension(k-1)' to 'dimension(k)'. Ignoring. |
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80 | :info:build rmbadname1: Replacing "index" with "index_bn". |
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81 | :info:build updatevars: "character curterms(20)*24" is mapped to "character curterms(20,24)" |
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82 | :info:build updatevars: "character septerms(20)*24" is mapped to "character septerms(20,24)" |
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83 | :info:build updatevars: "character tokens(maxtok)*(*)" is mapped to "character tokens(maxtok,(*))" |
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84 | :info:build rmbadname1: Replacing "index" with "index_bn". |
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85 | :info:build rmbadname1: Replacing "len" with "len_bn". |
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86 | :info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between x, nx |
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87 | :info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between w, x, nx |
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88 | :info:build sortvarnames: failed to compute dependencies because of cyclic dependencies between n, nx, bin0, delta, x, d |
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89 | :info:build "object of type 'builtin_function_or_method' has no len()" in evaluating 'len(ord)' (available names: []) |
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90 | :info:build Reading fortran codes... |
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91 | :info:build Reading file 'pymc/flib.f' (format:fix,strict) |
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92 | :info:build Reading file 'pymc/histogram.f' (format:fix,strict) |
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93 | :info:build Reading file 'pymc/flib_blas.f' (format:fix,strict) |
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94 | :info:build Reading file 'pymc/math.f' (format:fix,strict) |
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95 | :info:build Reading file 'pymc/gibbsit.f' (format:fix,strict) |
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96 | :info:build Line #1125 in pymc/gibbsit.f:" DOUBLE PRECISION INTENT(CACHE,HIDE), DIMENSION(2*ITERACNT) :: WORK" |
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97 | :info:build updatevars: attempt to change the type of "work" ("integer") to "double precision". Ignoring. |
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98 | :info:build Post-processing... |
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99 | :info:build Block: flib |
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100 | :info:build Block: logsum |
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101 | :info:build Block: combinationln |
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102 | :info:build {'attrspec': ['intent(hide)']} |
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103 | :info:build In: :flib:pymc/flib.f:expand_triangular |
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104 | :info:build vars2fortran: No typespec for argument "nf". |
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105 | :info:build {'attrspec': ['intent(hide)']} |
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106 | :info:build In: :flib:pymc/flib.f:expand_triangular |
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107 | :info:build vars2fortran: No typespec for argument "n". |
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108 | :info:build Block: expand_triangular |
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109 | :info:build Block: standardize |
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110 | :info:build Block: gammln |
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111 | :info:build Block: mvgammln |
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112 | :info:build Block: factrl |
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113 | :info:build Block: factln |
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114 | :info:build Block: rskewnorm |
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115 | :info:build Block: uniform_like |
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116 | :info:build Block: duniform_like |
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117 | :info:build Block: exponweib |
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118 | :info:build Block: exponweib_ppf |
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119 | :info:build Block: constrain |
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120 | :info:build Block: poisson |
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121 | :info:build Block: t |
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122 | :info:build Block: multinomial |
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123 | :info:build Block: weibull |
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124 | :info:build Block: logistic |
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125 | :info:build Block: normal |
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126 | :info:build Block: hnormal |
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127 | :info:build Block: lognormal |
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128 | :info:build Block: arlognormal |
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129 | :info:build Block: gev |
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130 | :info:build Block: gev_ppf |
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131 | :info:build Block: gamma |
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132 | :info:build Block: igamma |
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133 | :info:build Block: hyperg |
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134 | :info:build Block: geometric |
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135 | :info:build Block: dirichlet |
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136 | :info:build Block: cauchy |
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137 | :info:build Block: negbin |
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138 | :info:build Block: negbin2 |
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139 | :info:build Block: binomial |
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140 | :info:build Block: bernoulli |
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141 | :info:build Block: beta_like |
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142 | :info:build Block: mvhyperg |
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143 | :info:build Block: dirmultinom |
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144 | :info:build Block: wishart |
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145 | :info:build Block: trace |
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146 | :info:build Block: gamfun |
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147 | :info:build Block: gammds |
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148 | :info:build Block: trans |
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149 | :info:build Block: matmult |
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150 | :info:build Block: dtrm |
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151 | :info:build {} |
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152 | :info:build In: :flib:pymc/flib.f:elgs |
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153 | :info:build vars2fortran: No typespec for argument "n". |
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154 | :info:build Block: elgs |
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155 | :info:build Block: bico |
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156 | :info:build Block: chol |
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157 | :info:build Block: hermpoly |
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158 | :info:build Block: uniform |
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159 | :info:build Block: set_uniform |
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160 | :info:build Block: categorical |
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161 | :info:build Block: rcat |
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162 | :info:build Block: logit |
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163 | :info:build Block: invlogit |
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164 | :info:build Block: stukel_logit |
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165 | :info:build Block: stukel_invlogit |
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166 | :info:build Block: fixed_binsize |
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167 | :info:build Block: weighted_fixed_binsize |
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168 | :info:build Block: fixed_binsize_nd |
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169 | :info:build {'attrspec': ['dimension(n)']} |
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170 | :info:build In: :flib:pymc/histogram.f:qsorti |
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171 | :info:build vars2fortran: No typespec for argument "ord". |
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172 | :info:build {} |
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173 | :info:build In: :flib:pymc/histogram.f:qsorti |
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174 | :info:build vars2fortran: No typespec for argument "n". |
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175 | :info:build Block: qsorti |
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176 | :info:build Block: chol_mvnorm |
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177 | :info:build Block: cov_mvnorm |
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178 | :info:build Block: prec_mvnorm |
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179 | :info:build Block: blas_wishart |
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180 | :info:build Block: blas_wishart_cov |
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181 | :info:build Block: blas_inv_wishart |
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182 | :info:build Block: dtrsm_wrap |
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183 | :info:build Block: dtrmm_wrap |
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184 | :info:build Block: dchdc_wrap |
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185 | :info:build Block: dpotrs_wrap |
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186 | :info:build {} |
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187 | :info:build In: :flib:pymc/math.f:ppnd16 |
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188 | :info:build vars2fortran: No typespec for argument "ifault". |
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189 | :info:build Block: ppnd16 |
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190 | :info:build Block: calerf |
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191 | :info:build Block: derf |
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192 | :info:build Block: derfc |
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193 | :info:build Block: derfcx |
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194 | :info:build Block: gibbsit |
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195 | :info:build Block: matinput |
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196 | :info:build Block: vecinput |
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197 | :info:build Block: oneparse |
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198 | :info:build Block: gibbmain |
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199 | :info:build Block: empquant |
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200 | :info:build Block: dichot |
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201 | :info:build Block: thin |
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202 | :info:build Block: mctest |
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203 | :info:build Block: indtest |
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204 | :info:build Block: mcest |
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205 | :info:build Block: ppnd7 |
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206 | :info:build Block: ssort |
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207 | :info:build Post-processing (stage 2)... |
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208 | :info:build Building modules... |
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209 | :info:build Building module "flib"... |
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210 | :info:build Constructing wrapper function "logsum"... |
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211 | :info:build s = logsum(x) |
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212 | :info:build Creating wrapper for Fortran function "combinationln"("combinationln")... |
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213 | :info:build Constructing wrapper function "combinationln"... |
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214 | :info:build combinationln = combinationln(n,k) |
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215 | :info:build Constructing wrapper function "expand_triangular"... |
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216 | :info:build t = expand_triangular(d,f) |
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217 | :info:build Constructing wrapper function "standardize"... |
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218 | :info:build z = standardize(x,loc,scale) |
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219 | :info:build Creating wrapper for Fortran function "gammln"("gammln")... |
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220 | :info:build Constructing wrapper function "gammln"... |
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221 | :info:build gammln = gammln(xx) |
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222 | :info:build Creating wrapper for Fortran function "mvgammln"("mvgammln")... |
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223 | :info:build Constructing wrapper function "mvgammln"... |
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224 | :info:build mvgammln = mvgammln(x,k) |
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225 | :info:build Creating wrapper for Fortran function "factrl"("factrl")... |
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226 | :info:build Constructing wrapper function "factrl"... |
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227 | :info:build factrl = factrl(n) |
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228 | :info:build Creating wrapper for Fortran function "factln"("factln")... |
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229 | :info:build Constructing wrapper function "factln"... |
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230 | :info:build factln = factln(n) |
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231 | :info:build Constructing wrapper function "rskewnorm"... |
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232 | :info:build x = rskewnorm(nx,mu,tau,alph,rn) |
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233 | :info:build Constructing wrapper function "uniform_like"... |
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234 | :info:build like = uniform_like(x,lower,upper) |
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235 | :info:build Constructing wrapper function "duniform_like"... |
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236 | :info:build like = duniform_like(x,lower,upper) |
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237 | :info:build Constructing wrapper function "exponweib"... |
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238 | :info:build like = exponweib(x,a,c,loc,scale) |
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239 | :info:build Constructing wrapper function "exponweib_ppf"... |
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240 | :info:build ppf = exponweib_ppf(q,a,c) |
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241 | :info:build Constructing wrapper function "constrain"... |
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242 | :info:build pass = constrain(x,a,b,allow_equal) |
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243 | :info:build Constructing wrapper function "poisson"... |
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244 | :info:build like = poisson(x,mu) |
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245 | :info:build Constructing wrapper function "t"... |
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246 | :info:build like = t(x,nu) |
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247 | :info:build Constructing wrapper function "multinomial"... |
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248 | :info:build like = multinomial(x,n,p) |
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249 | :info:build Constructing wrapper function "weibull"... |
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250 | :info:build like = weibull(x,alpha,beta) |
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251 | :info:build Constructing wrapper function "logistic"... |
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252 | :info:build like = logistic(x,mu,tau) |
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253 | :info:build Constructing wrapper function "normal"... |
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254 | :info:build like = normal(x,mu,tau) |
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255 | :info:build Constructing wrapper function "hnormal"... |
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256 | :info:build like = hnormal(x,tau) |
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257 | :info:build Constructing wrapper function "lognormal"... |
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258 | :info:build like = lognormal(x,mu,tau) |
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259 | :info:build Constructing wrapper function "arlognormal"... |
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260 | :info:build like = arlognormal(x,mu,sigma,rho,beta) |
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261 | :info:build Constructing wrapper function "gev"... |
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262 | :info:build like = gev(x,xi,mu,sigma) |
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263 | :info:build Constructing wrapper function "gev_ppf"... |
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264 | :info:build ppf = gev_ppf(q,xi) |
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265 | :info:build Constructing wrapper function "gamma"... |
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266 | :info:build like = gamma(x,alpha,beta) |
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267 | :info:build Constructing wrapper function "igamma"... |
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268 | :info:build like = igamma(x,alpha,beta) |
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269 | :info:build Constructing wrapper function "hyperg"... |
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270 | :info:build like = hyperg(x,draws,success,total) |
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271 | :info:build Constructing wrapper function "geometric"... |
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272 | :info:build like = geometric(x,p) |
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273 | :info:build Constructing wrapper function "dirichlet"... |
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274 | :info:build like = dirichlet(x,theta) |
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275 | :info:build Constructing wrapper function "cauchy"... |
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276 | :info:build like = cauchy(x,alpha,beta) |
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277 | :info:build Constructing wrapper function "negbin"... |
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278 | :info:build like = negbin(x,r,p) |
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279 | :info:build Constructing wrapper function "negbin2"... |
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280 | :info:build like = negbin2(x,mu,a) |
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281 | :info:build Constructing wrapper function "binomial"... |
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282 | :info:build like = binomial(x,n,p) |
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283 | :info:build Constructing wrapper function "bernoulli"... |
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284 | :info:build like = bernoulli(x,p) |
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285 | :info:build Constructing wrapper function "beta_like"... |
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286 | :info:build like = beta_like(x,alpha,beta) |
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287 | :info:build Constructing wrapper function "mvhyperg"... |
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288 | :info:build like = mvhyperg(x,color) |
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289 | :info:build Constructing wrapper function "dirmultinom"... |
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290 | :info:build like = dirmultinom(x,theta) |
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291 | :info:build Constructing wrapper function "wishart"... |
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292 | :info:build like = wishart(x,n,sigma) |
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293 | :info:build Constructing wrapper function "trace"... |
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294 | :info:build trace(mat,tr,[k]) |
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295 | :info:build Constructing wrapper function "gamfun"... |
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296 | :info:build gx = gamfun(xx) |
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297 | :info:build Creating wrapper for Fortran function "gammds"("gammds")... |
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298 | :info:build Constructing wrapper function "gammds"... |
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299 | :info:build gammds = gammds(y,p,ifault) |
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300 | :info:build Constructing wrapper function "trans"... |
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301 | :info:build tmat = trans(mat) |
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302 | :info:build Constructing wrapper function "matmult"... |
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303 | :info:build prod = matmult(mat1,mat2) |
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304 | :info:build Constructing wrapper function "dtrm"... |
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305 | :info:build d = dtrm(a) |
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306 | :info:build Constructing wrapper function "elgs"... |
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307 | :info:build elgs(a,indx,[n]) |
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308 | :info:build Creating wrapper for Fortran function "bico"("bico")... |
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309 | :info:build Constructing wrapper function "bico"... |
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310 | :info:build bico = bico(n,k) |
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311 | :info:build Constructing wrapper function "chol"... |
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312 | :info:build c = chol(a,[n]) |
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313 | :info:build Constructing wrapper function "hermpoly"... |
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314 | :info:build cx = hermpoly(n,x) |
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315 | :info:build Creating wrapper for Fortran function "uniform"("uniform")... |
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316 | :info:build Constructing wrapper function "uniform"... |
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317 | :info:build uniform = uniform() |
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318 | :info:build Constructing wrapper function "set_uniform"... |
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319 | :info:build set_uniform(seed1,seed2) |
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320 | :info:build Constructing wrapper function "categorical"... |
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321 | :info:build like = categorical(x,p) |
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322 | :info:build Constructing wrapper function "rcat"... |
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323 | :info:build s = rcat(p,rands) |
---|
324 | :info:build Constructing wrapper function "logit"... |
---|
325 | :info:build ltheta = logit(theta) |
---|
326 | :info:build Constructing wrapper function "invlogit"... |
---|
327 | :info:build theta = invlogit(ltheta) |
---|
328 | :info:build Constructing wrapper function "stukel_logit"... |
---|
329 | :info:build ltheta = stukel_logit(theta,a1,a2,[overwrite_theta]) |
---|
330 | :info:build Constructing wrapper function "stukel_invlogit"... |
---|
331 | :info:build theta = stukel_invlogit(ltheta,a1,a2,[overwrite_ltheta]) |
---|
332 | :info:build Constructing wrapper function "fixed_binsize"... |
---|
333 | :info:build h = fixed_binsize(x,bin0,delta,n) |
---|
334 | :info:build Constructing wrapper function "weighted_fixed_binsize"... |
---|
335 | :info:build h = weighted_fixed_binsize(x,w,bin0,delta,n) |
---|
336 | :info:build Constructing wrapper function "fixed_binsize_nd"... |
---|
337 | :info:build count = fixed_binsize_nd(x,bin0,delta,n,nc) |
---|
338 | :info:build Constructing wrapper function "qsorti"... |
---|
339 | :info:build qsorti(ord,a,[n]) |
---|
340 | :info:build Constructing wrapper function "chol_mvnorm"... |
---|
341 | :info:build like = chol_mvnorm(x,mu,sig,[overwrite_x,overwrite_mu]) |
---|
342 | :info:build Constructing wrapper function "cov_mvnorm"... |
---|
343 | :info:build like = cov_mvnorm(x,mu,c,[overwrite_x,overwrite_mu,overwrite_c]) |
---|
344 | :info:build Constructing wrapper function "prec_mvnorm"... |
---|
345 | :info:build like = prec_mvnorm(x,mu,tau,[overwrite_x,overwrite_mu,overwrite_tau]) |
---|
346 | :info:build Constructing wrapper function "blas_wishart"... |
---|
347 | :info:build like = blas_wishart(x,n,t,[overwrite_x,overwrite_t]) |
---|
348 | :info:build Constructing wrapper function "blas_wishart_cov"... |
---|
349 | :info:build like = blas_wishart_cov(x,n,v,[overwrite_x,overwrite_v]) |
---|
350 | :info:build Constructing wrapper function "blas_inv_wishart"... |
---|
351 | :info:build like = blas_inv_wishart(x,n,t,[overwrite_x,overwrite_t]) |
---|
352 | :info:build Constructing wrapper function "dtrsm_wrap"... |
---|
353 | :info:build dtrsm_wrap(a,b,side,transa,uplo) |
---|
354 | :info:build Constructing wrapper function "dtrmm_wrap"... |
---|
355 | :info:build dtrmm_wrap(a,b,side,transa,uplo) |
---|
356 | :info:build Constructing wrapper function "dchdc_wrap"... |
---|
357 | :info:build piv,info = dchdc_wrap(a) |
---|
358 | :info:build Constructing wrapper function "dpotrs_wrap"... |
---|
359 | :info:build info = dpotrs_wrap(chol_fac,b,[uplo]) |
---|
360 | :info:build Creating wrapper for Fortran function "ppnd16"("ppnd16")... |
---|
361 | :info:build Constructing wrapper function "ppnd16"... |
---|
362 | :info:build ppnd16 = ppnd16(p,ifault) |
---|
363 | :info:build Constructing wrapper function "calerf"... |
---|
364 | :info:build calerf(arg,result,jint) |
---|
365 | :info:build Creating wrapper for Fortran function "derf"("derf")... |
---|
366 | :info:build Constructing wrapper function "derf"... |
---|
367 | :info:build derf = derf(x) |
---|
368 | :info:build Creating wrapper for Fortran function "derfc"("derfc")... |
---|
369 | :info:build Constructing wrapper function "derfc"... |
---|
370 | :info:build derfc = derfc(x) |
---|
371 | :info:build Creating wrapper for Fortran function "derfcx"("derfcx")... |
---|
372 | :info:build Constructing wrapper function "derfcx"... |
---|
373 | :info:build derfcx = derfcx(x) |
---|
374 | :info:build Constructing wrapper function "matinput"... |
---|
375 | :info:build matinput(uid,matout,rowused,colused,r15,[rowmax,colmax]) |
---|
376 | :info:build Constructing wrapper function "vecinput"... |
---|
377 | :info:build vecinput(uid,vecout,vecused,r15,[vecmax]) |
---|
378 | :info:build Constructing wrapper function "oneparse"... |
---|
379 | :info:build getarrdims:warning: assumed shape array, using 0 instead of '(*)' |
---|
380 | :info:build oneparse(instring,delimit,tokens,tokcnt,r15,[maxtok]) |
---|
381 | :info:build Constructing wrapper function "gibbmain"... |
---|
382 | :info:build nmin,kthin,nburn,nprec,kmind = gibbmain(original,q,r,s,epsilon) |
---|
383 | :info:build Creating wrapper for Fortran function "empquant"("empquant")... |
---|
384 | :info:build Constructing wrapper function "empquant"... |
---|
385 | :info:build getarrdims:warning: assumed shape array, using 0 instead of '*' |
---|
386 | :info:build empquant = empquant(data,q,work,[iteracnt]) |
---|
387 | :info:build Constructing wrapper function "dichot"... |
---|
388 | :info:build dichot(data,cutpt,zt,[iteracnt]) |
---|
389 | :info:build Constructing wrapper function "thin"... |
---|
390 | :info:build thin(series,kthin,result,thincnt,[iteracnt]) |
---|
391 | :info:build Constructing wrapper function "mctest"... |
---|
392 | :info:build mctest(data,g2,bic,[datacnt]) |
---|
393 | :info:build Constructing wrapper function "indtest"... |
---|
394 | :info:build indtest(data,g2,bic,[datacnt]) |
---|
395 | :info:build Constructing wrapper function "mcest"... |
---|
396 | :info:build mcest(data,alpha,beta,[datacnt]) |
---|
397 | :info:build Creating wrapper for Fortran function "ppnd7"("ppnd7")... |
---|
398 | :info:build Constructing wrapper function "ppnd7"... |
---|
399 | :info:build ppnd7 = ppnd7(p,ifault) |
---|
400 | :info:build Constructing wrapper function "ssort"... |
---|
401 | :info:build ssort(x,y,kflag,[n]) |
---|
402 | :info:build Constructing COMMON block support for "unif_seeds"... |
---|
403 | :info:build s1,s2 |
---|
404 | :info:build Wrote C/API module "flib" to file "build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c" |
---|
405 | :info:build Fortran 77 wrappers are saved to "build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f" |
---|
406 | :info:build adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources. |
---|
407 | :info:build adding 'build/src.macosx-10.8-fat-2.5' to include_dirs. |
---|
408 | :info:build copying /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/f2py/src/fortranobject.c -> build/src.macosx-10.8-fat-2.5 |
---|
409 | :info:build copying /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/f2py/src/fortranobject.h -> build/src.macosx-10.8-fat-2.5 |
---|
410 | :info:build adding 'build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f' to sources. |
---|
411 | :info:build building extension "pymc.LazyFunction" sources |
---|
412 | :info:build building extension "pymc.Container_values" sources |
---|
413 | :info:build building extension "pymc.gp.linalg_utils" sources |
---|
414 | :info:build f2py options: [] |
---|
415 | :info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/linalg_utilsmodule.c |
---|
416 | :info:build creating build/src.macosx-10.8-fat-2.5/pymc/gp |
---|
417 | :info:build Reading fortran codes... |
---|
418 | :info:build Reading file 'pymc/gp/linalg_utils.f' (format:fix,strict) |
---|
419 | :info:build Post-processing... |
---|
420 | :info:build Block: linalg_utils |
---|
421 | :info:build Block: remove_duplicates |
---|
422 | :info:build Block: check_repeats |
---|
423 | :info:build {'attrspec': ['intent(hide)']} |
---|
424 | :info:build In: :linalg_utils:pymc/gp/linalg_utils.f:dcopy_wrap |
---|
425 | :info:build vars2fortran: No typespec for argument "nx". |
---|
426 | :info:build Block: dcopy_wrap |
---|
427 | :info:build Block: diag_call |
---|
428 | :info:build Block: cov_fun |
---|
429 | :info:build {'attrspec': ['intent(hide)']} |
---|
430 | :info:build In: :linalg_utils:pymc/gp/linalg_utils.f:basis_diag_call |
---|
431 | :info:build vars2fortran: No typespec for argument "nbas". |
---|
432 | :info:build Block: basis_diag_call |
---|
433 | :info:build Block: dtrmm_wrap |
---|
434 | :info:build Block: dtrsm_wrap |
---|
435 | :info:build Block: dpotrf_wrap |
---|
436 | :info:build Block: gp_array_logp |
---|
437 | :info:build Post-processing (stage 2)... |
---|
438 | :info:build Building modules... |
---|
439 | :info:build Constructing call-back function "cb_cov_fun_in_diag_call__user__routines" |
---|
440 | :info:build def cov_fun(xe): return q |
---|
441 | :info:build Building module "linalg_utils"... |
---|
442 | :info:build Constructing wrapper function "remove_duplicates"... |
---|
443 | :info:build nr,rf,rt,nu,xu,ui = remove_duplicates(x) |
---|
444 | :info:build Constructing wrapper function "check_repeats"... |
---|
445 | :info:build f,new_indices,n_new_indices = check_repeats(x,x_sofar,f_sofar) |
---|
446 | :info:build Constructing wrapper function "dcopy_wrap"... |
---|
447 | :info:build dcopy_wrap(x,y) |
---|
448 | :info:build Constructing wrapper function "diag_call"... |
---|
449 | :info:build v = diag_call(x,cov_fun,[cov_fun_extra_args]) |
---|
450 | :info:build Constructing wrapper function "basis_diag_call"... |
---|
451 | :info:build v = basis_diag_call(basis_x) |
---|
452 | :info:build Constructing wrapper function "dtrmm_wrap"... |
---|
453 | :info:build dtrmm_wrap(a,b,[uplo,transa]) |
---|
454 | :info:build Constructing wrapper function "dtrsm_wrap"... |
---|
455 | :info:build dtrsm_wrap(a,b,[uplo,transa,alpha]) |
---|
456 | :info:build Constructing wrapper function "dpotrf_wrap"... |
---|
457 | :info:build info = dpotrf_wrap(a) |
---|
458 | :info:build Constructing wrapper function "gp_array_logp"... |
---|
459 | :info:build like = gp_array_logp(x,mu,sig,[overwrite_x,overwrite_mu]) |
---|
460 | :info:build Wrote C/API module "linalg_utils" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/linalg_utilsmodule.c" |
---|
461 | :info:build adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources. |
---|
462 | :info:build adding 'build/src.macosx-10.8-fat-2.5' to include_dirs. |
---|
463 | :info:build building extension "pymc.gp.incomplete_chol" sources |
---|
464 | :info:build f2py options: [] |
---|
465 | :info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/incomplete_cholmodule.c |
---|
466 | :info:build Reading fortran codes... |
---|
467 | :info:build Reading file 'pymc/gp/incomplete_chol.f' (format:fix,strict) |
---|
468 | :info:build Post-processing... |
---|
469 | :info:build Block: incomplete_chol |
---|
470 | :info:build {} |
---|
471 | :info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_continue:unknown_interface:rowfun |
---|
472 | :info:build vars2fortran: No typespec for argument "itot". |
---|
473 | :info:build Block: ichol_continue |
---|
474 | :info:build {} |
---|
475 | :info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_continue:unknown_interface:rowfun |
---|
476 | :info:build vars2fortran: No typespec for argument "itot". |
---|
477 | :info:build Block: rowfun |
---|
478 | :info:build Block: ichol |
---|
479 | :info:build Block: rowfun |
---|
480 | :info:build {'attrspec': ['intent(hide)']} |
---|
481 | :info:build In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_basis |
---|
482 | :info:build vars2fortran: No typespec for argument "n_nug". |
---|
483 | :info:build Block: ichol_basis |
---|
484 | :info:build Block: ichol_full |
---|
485 | :info:build Post-processing (stage 2)... |
---|
486 | :info:build Building modules... |
---|
487 | :info:build Constructing call-back function "cb_rowfun_in_ichol_continue__user__routines" |
---|
488 | :info:build def rowfun(itot,x,rowvec): return |
---|
489 | :info:build Constructing call-back function "cb_rowfun_in_ichol__user__routines" |
---|
490 | :info:build def rowfun(i,x,rowvec): return |
---|
491 | :info:build Building module "incomplete_chol"... |
---|
492 | :info:build Constructing wrapper function "ichol_continue"... |
---|
493 | :info:build m,piv = ichol_continue(sig,diag,piv,reltol,x,rowfun,[overwrite_x,rowfun_extra_args]) |
---|
494 | :info:build Constructing wrapper function "ichol"... |
---|
495 | :info:build sig,m,piv = ichol(diag,reltol,x,rowfun,[overwrite_x,rowfun_extra_args]) |
---|
496 | :info:build Constructing wrapper function "ichol_basis"... |
---|
497 | :info:build sig,p,m = ichol_basis(basis,nug,reltol) |
---|
498 | :info:build Constructing wrapper function "ichol_full"... |
---|
499 | :info:build sig,m,p = ichol_full(c,reltol) |
---|
500 | :info:build Wrote C/API module "incomplete_chol" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/incomplete_cholmodule.c" |
---|
501 | :info:build adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources. |
---|
502 | :info:build adding 'build/src.macosx-10.8-fat-2.5' to include_dirs. |
---|
503 | :info:build building extension "pymc.gp.cov_funs.isotropic_cov_funs" sources |
---|
504 | :info:build f2py options: [] |
---|
505 | :info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funsmodule.c |
---|
506 | :info:build creating build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
---|
507 | :info:build Reading fortran codes... |
---|
508 | :info:build Reading file 'pymc/gp/cov_funs/isotropic_cov_funs.f' (format:fix,strict) |
---|
509 | :info:build Reading file 'blas/BLAS/dscal.f' (format:fix,strict) |
---|
510 | :info:build Post-processing... |
---|
511 | :info:build Block: isotropic_cov_funs |
---|
512 | :info:build Block: imul |
---|
513 | :info:build Block: symmetrize |
---|
514 | :info:build Block: stein_spatiotemporal |
---|
515 | :info:build Block: matern |
---|
516 | :info:build Block: gaussian |
---|
517 | :info:build Block: exponential |
---|
518 | :info:build Block: brownian |
---|
519 | :info:build Block: frac_brownian |
---|
520 | :info:build Block: pow_exp |
---|
521 | :info:build Block: sphere |
---|
522 | :info:build Block: quadratic |
---|
523 | :info:build Block: dgamma |
---|
524 | :info:build Block: rkbesl |
---|
525 | :info:build Block: dscal |
---|
526 | :info:build Post-processing (stage 2)... |
---|
527 | :info:build Building modules... |
---|
528 | :info:build Building module "isotropic_cov_funs"... |
---|
529 | :info:build Constructing wrapper function "imul"... |
---|
530 | :info:build imul(c,a,[cmin,cmax,symm]) |
---|
531 | :info:build Constructing wrapper function "symmetrize"... |
---|
532 | :info:build symmetrize(c,[cmin,cmax]) |
---|
533 | :info:build Constructing wrapper function "stein_spatiotemporal"... |
---|
534 | :info:build stein_spatiotemporal(c,gt,origin_val,[cmin,cmax,symm]) |
---|
535 | :info:build Constructing wrapper function "matern"... |
---|
536 | :info:build matern(c,diff_degree,[cmin,cmax,symm]) |
---|
537 | :info:build Constructing wrapper function "gaussian"... |
---|
538 | :info:build gaussian(c,[cmin,cmax,symm]) |
---|
539 | :info:build Constructing wrapper function "exponential"... |
---|
540 | :info:build exponential(c,[cmin,cmax,symm]) |
---|
541 | :info:build Constructing wrapper function "brownian"... |
---|
542 | :info:build brownian(c,x,y,[cmin,cmax,symm]) |
---|
543 | :info:build Constructing wrapper function "frac_brownian"... |
---|
544 | :info:build frac_brownian(c,x,y,h,[cmin,cmax,symm]) |
---|
545 | :info:build Constructing wrapper function "pow_exp"... |
---|
546 | :info:build pow_exp(c,pow,[cmin,cmax,symm]) |
---|
547 | :info:build Constructing wrapper function "sphere"... |
---|
548 | :info:build sphere(c,[cmin,cmax,symm]) |
---|
549 | :info:build Constructing wrapper function "quadratic"... |
---|
550 | :info:build quadratic(c,phi,[cmin,cmax,symm]) |
---|
551 | :info:build Creating wrapper for Fortran function "dgamma"("dgamma")... |
---|
552 | :info:build Constructing wrapper function "dgamma"... |
---|
553 | :info:build dgamma = dgamma(x) |
---|
554 | :info:build Constructing wrapper function "rkbesl"... |
---|
555 | :info:build rkbesl(x,alpha,nb,ize,bk,ncalc) |
---|
556 | :info:build Constructing wrapper function "dscal"... |
---|
557 | :info:build getarrdims:warning: assumed shape array, using 0 instead of '*' |
---|
558 | :info:build dscal(n,da,dx,incx) |
---|
559 | :info:build Wrote C/API module "isotropic_cov_funs" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funsmodule.c" |
---|
560 | :info:build Fortran 77 wrappers are saved to "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f" |
---|
561 | :info:build adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources. |
---|
562 | :info:build adding 'build/src.macosx-10.8-fat-2.5' to include_dirs. |
---|
563 | :info:build adding 'build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f' to sources. |
---|
564 | :info:build building extension "pymc.gp.cov_funs.distances" sources |
---|
565 | :info:build f2py options: [] |
---|
566 | :info:build f2py:> build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/distancesmodule.c |
---|
567 | :info:build Reading fortran codes... |
---|
568 | :info:build Reading file 'pymc/gp/cov_funs/distances.f' (format:fix,strict) |
---|
569 | :info:build Post-processing... |
---|
570 | :info:build Block: distances |
---|
571 | :info:build Block: euclidean |
---|
572 | :info:build Block: geographic |
---|
573 | :info:build Block: paniso_geo_rad |
---|
574 | :info:build Block: aniso_geo_rad |
---|
575 | :info:build Post-processing (stage 2)... |
---|
576 | :info:build Building modules... |
---|
577 | :info:build Building module "distances"... |
---|
578 | :info:build Constructing wrapper function "euclidean"... |
---|
579 | :info:build euclidean(d,x,y,[cmin,cmax,symm]) |
---|
580 | :info:build Constructing wrapper function "geographic"... |
---|
581 | :info:build geographic(d,x,y,[cmin,cmax,symm]) |
---|
582 | :info:build Constructing wrapper function "paniso_geo_rad"... |
---|
583 | :info:build paniso_geo_rad(d,x,y,ctrs,scals,[cmin,cmax,symm]) |
---|
584 | :info:build Constructing wrapper function "aniso_geo_rad"... |
---|
585 | :info:build aniso_geo_rad(d,x,y,inc,ecc,[cmin,cmax,symm]) |
---|
586 | :info:build Wrote C/API module "distances" to file "build/src.macosx-10.8-fat-2.5/pymc/gp/cov_funs/distancesmodule.c" |
---|
587 | :info:build adding 'build/src.macosx-10.8-fat-2.5/fortranobject.c' to sources. |
---|
588 | :info:build adding 'build/src.macosx-10.8-fat-2.5' to include_dirs. |
---|
589 | :info:build build_src: building npy-pkg config files |
---|
590 | :info:build running build_py |
---|
591 | :info:build creating build/lib.macosx-10.8-fat-2.5 |
---|
592 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc |
---|
593 | :info:build copying pymc/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
594 | :info:build copying pymc/CommonDeterministics.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
595 | :info:build copying pymc/Container.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
596 | :info:build copying pymc/decorators.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
597 | :info:build copying pymc/diagnostics.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
598 | :info:build copying pymc/distributions.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
599 | :info:build copying pymc/graph.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
600 | :info:build copying pymc/InstantiationDecorators.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
601 | :info:build copying pymc/Matplot.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
602 | :info:build copying pymc/MCMC.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
603 | :info:build copying pymc/Model.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
604 | :info:build copying pymc/Node.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
605 | :info:build copying pymc/NormalApproximation.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
606 | :info:build copying pymc/PyMCObjects.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
607 | :info:build copying pymc/ScipyDistributions.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
608 | :info:build copying pymc/StepMethods.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
609 | :info:build copying pymc/utils.py -> build/lib.macosx-10.8-fat-2.5/pymc |
---|
610 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc/database |
---|
611 | :info:build copying pymc/database/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
---|
612 | :info:build copying pymc/database/base.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
---|
613 | :info:build copying pymc/database/hdf5.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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614 | :info:build copying pymc/database/mysql.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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615 | :info:build copying pymc/database/no_trace.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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616 | :info:build copying pymc/database/pickle.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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617 | :info:build copying pymc/database/ram.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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618 | :info:build copying pymc/database/sqlite.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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619 | :info:build copying pymc/database/txt.py -> build/lib.macosx-10.8-fat-2.5/pymc/database |
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620 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc/examples |
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621 | :info:build copying pymc/examples/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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622 | :info:build copying pymc/examples/custom_step.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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623 | :info:build copying pymc/examples/DisasterModel.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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624 | :info:build copying pymc/examples/gelman_bioassay.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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625 | :info:build copying pymc/examples/model_1.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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626 | :info:build copying pymc/examples/model_1_gof.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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627 | :info:build copying pymc/examples/model_1_missing.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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628 | :info:build copying pymc/examples/model_2.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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629 | :info:build copying pymc/examples/model_3.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
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630 | :info:build copying pymc/examples/straightlinefit.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
---|
631 | :info:build copying pymc/examples/weibull_fit.py -> build/lib.macosx-10.8-fat-2.5/pymc/examples |
---|
632 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc/tests |
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633 | :info:build copying pymc/tests/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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634 | :info:build copying pymc/tests/check_dependencies.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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635 | :info:build copying pymc/tests/objectmodel.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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636 | :info:build copying pymc/tests/screen.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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637 | :info:build copying pymc/tests/test_adaptive.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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638 | :info:build copying pymc/tests/test_AM.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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639 | :info:build copying pymc/tests/test_basiscov.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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640 | :info:build copying pymc/tests/test_binary_step.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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641 | :info:build copying pymc/tests/test_container.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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642 | :info:build copying pymc/tests/test_convergence.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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643 | :info:build copying pymc/tests/test_cov.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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644 | :info:build copying pymc/tests/test_database.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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645 | :info:build copying pymc/tests/test_distributions.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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646 | :info:build copying pymc/tests/test_GP_MCMC.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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647 | :info:build copying pymc/tests/test_graph.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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648 | :info:build copying pymc/tests/test_instantiation.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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649 | :info:build copying pymc/tests/test_interactive.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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650 | :info:build copying pymc/tests/test_LazyFunction.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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651 | :info:build copying pymc/tests/test_MCMCSampler.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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652 | :info:build copying pymc/tests/test_mean.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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653 | :info:build copying pymc/tests/test_norm_approx.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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654 | :info:build copying pymc/tests/test_observation.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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655 | :info:build copying pymc/tests/test_realization.py -> build/lib.macosx-10.8-fat-2.5/pymc/tests |
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656 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc/gp |
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657 | :info:build copying pymc/gp/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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658 | :info:build copying pymc/gp/BasisCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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659 | :info:build copying pymc/gp/Covariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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660 | :info:build copying pymc/gp/FullRankCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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661 | :info:build copying pymc/gp/gpplots.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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662 | :info:build copying pymc/gp/GPutils.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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663 | :info:build copying pymc/gp/Mean.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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664 | :info:build copying pymc/gp/NearlyFullRankCovariance.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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665 | :info:build copying pymc/gp/PyMC_objects.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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666 | :info:build copying pymc/gp/Realization.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp |
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667 | :info:build creating build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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668 | :info:build copying pymc/gp/cov_funs/__init__.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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669 | :info:build copying pymc/gp/cov_funs/bases.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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670 | :info:build copying pymc/gp/cov_funs/brownian.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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671 | :info:build copying pymc/gp/cov_funs/cov_utils.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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672 | :info:build copying pymc/gp/cov_funs/wrapped_distances.py -> build/lib.macosx-10.8-fat-2.5/pymc/gp/cov_funs |
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673 | :info:build running build_ext |
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674 | :info:build customize UnixCCompiler |
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675 | :info:build customize UnixCCompiler using build_ext |
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676 | :info:build customize NAGFCompiler |
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677 | :info:build Found executable /opt/local/bin/gfortran-mp-4.7 |
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678 | :info:build customize AbsoftFCompiler |
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679 | :info:build customize IBMFCompiler |
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680 | :info:build Could not locate executable xlf95 |
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681 | :info:build customize IntelFCompiler |
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682 | :info:build Could not locate executable ifort |
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683 | :info:build Could not locate executable ifc |
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684 | :info:build customize GnuFCompiler |
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685 | :info:build gnu: no Fortran 90 compiler found |
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686 | :info:build Could not locate executable g77 |
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687 | :info:build Could not locate executable f77 |
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688 | :info:build gnu: no Fortran 90 compiler found |
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689 | :info:build customize Gnu95FCompiler |
---|
690 | :info:build Could not locate executable gfortran |
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691 | :info:build Could not locate executable f95 |
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692 | :info:build customize Gnu95FCompiler |
---|
693 | :info:build customize Gnu95FCompiler using build_ext |
---|
694 | :info:build building 'pymc.flib' extension |
---|
695 | :info:build compiling C sources |
---|
696 | :info:build C compiler: /usr/bin/clang -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -arch x86_64 |
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697 | :info:build |
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698 | :info:build creating build/temp.macosx-10.8-fat-2.5 |
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699 | :info:build creating build/temp.macosx-10.8-fat-2.5/build |
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700 | :info:build creating build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5 |
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701 | :info:build creating build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc |
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702 | :info:build compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.8-fat-2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c' |
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703 | :info:build extra options: '-msse3' |
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704 | :info:build clang: build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c |
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705 | :info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:7949:13: warning: array index 2 is past the end of the array (which contains 2 elements) [-Warray-bounds] |
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706 | :info:build d = shape(x,2); |
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707 | :info:build ^ ~ |
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708 | :info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:85:24: note: expanded from macro 'shape' |
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709 | :info:build #define shape(var,dim) var ## _Dims[dim] |
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710 | :info:build ^ |
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711 | :info:build <scratch space>:272:1: note: expanded from macro 'x' |
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712 | :info:build x_Dims |
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713 | :info:build ^ |
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714 | :info:build build/src.macosx-10.8-fat-2.5/pymc/flibmodule.c:7850:3: note: array 'x_Dims' declared here |
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715 | :info:build npy_intp x_Dims[2] = {-1, -1}; |
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716 | :info:build ^ |
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717 | :info:build 1 warning generated. |
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718 | :info:build clang: build/src.macosx-10.8-fat-2.5/fortranobject.c |
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719 | :info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] |
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720 | :info:build if ((fp->defs[i].func==NULL)) { |
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721 | :info:build ~~~~~~~~~~~~~~~~^~~~~~ |
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722 | :info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: note: remove extraneous parentheses around the comparison to silence this warning |
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723 | :info:build if ((fp->defs[i].func==NULL)) { |
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724 | :info:build ~ ^ ~ |
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725 | :info:build build/src.macosx-10.8-fat-2.5/fortranobject.c:338:30: note: use '=' to turn this equality comparison into an assignment |
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726 | :info:build if ((fp->defs[i].func==NULL)) { |
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727 | :info:build ^~ |
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728 | :info:build = |
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729 | :info:build 1 warning generated. |
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730 | :info:build compiling Fortran sources |
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731 | :info:build Fortran f77 compiler: /opt/local/bin/gfortran-mp-4.7 -Wall -ffixed-form -fno-second-underscore -m64 -O3 -funroll-loops |
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732 | :info:build Fortran f90 compiler: /opt/local/bin/gfortran-mp-4.7 -m64 -m64 -O3 -funroll-loops |
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733 | :info:build Fortran fix compiler: /opt/local/bin/gfortran-mp-4.7 -Wall -ffixed-form -fno-second-underscore -m64 -m64 -O3 -funroll-loops |
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734 | :info:build creating build/temp.macosx-10.8-fat-2.5/pymc |
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735 | :info:build compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.8-fat-2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c' |
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736 | :info:build gfortran-mp-4.7:f77: pymc/flib.f |
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737 | :info:build pymc/flib.f:376.13: |
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738 | :info:build |
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739 | :info:build t1 = dexp(-z(i)**cc) |
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740 | :info:build 1 |
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741 | :info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) |
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742 | :info:build pymc/flib.f:1999.15: |
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743 | :info:build |
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744 | :info:build PI = ABS(A(INDX(I),J))/C(INDX(I)) |
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745 | :info:build 1 |
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746 | :info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) |
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747 | :info:build pymc/flib.f:2013.16: |
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748 | :info:build |
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749 | :info:build PJ = A(INDX(I),J)/A(INDX(J),J) |
---|
750 | :info:build 1 |
---|
751 | :info:build Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) |
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752 | :info:build pymc/flib.f:2259.31: |
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753 | :info:build |
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754 | :info:build DOUBLE PRECISION p(k),val,like |
---|
755 | :info:build 1 |
---|
756 | :info:build Warning: Unused variable 'val' declared at (1) |
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757 | :info:build pymc/flib.f: In function 'uniform': |
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758 | :info:build pymc/flib.f:2194:0: warning: 'z' is used uninitialized in this function [-Wuninitialized] |
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759 | :info:build pymc/flib.f: In function 'elgs': |
---|
760 | :info:build pymc/flib.f:2002:0: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] |
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761 | :info:build gfortran-mp-4.7:f77: pymc/histogram.f |
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762 | :info:build gfortran-mp-4.7:f77: pymc/flib_blas.f |
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763 | :info:build gfortran-mp-4.7:f77: pymc/math.f |
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764 | :info:build pymc/math.f:395.6: |
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765 | :info:build |
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766 | :info:build DOUBLE PRECISION FUNCTION DERF(X) |
---|
767 | :info:build 1 |
---|
768 | :info:build Warning: 'derf' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. |
---|
769 | :info:build pymc/math.f:416.6: |
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770 | :info:build |
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771 | :info:build DOUBLE PRECISION FUNCTION DERFC(X) |
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772 | :info:build 1 |
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773 | :info:build Warning: 'derfc' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. |
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774 | :info:build gfortran-mp-4.7:f77: pymc/gibbsit.f |
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775 | :info:build pymc/gibbsit.f:2159.5: |
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776 | :info:build |
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777 | :info:build 215 IF (R .GT. .5898437) GO TO 220 |
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778 | :info:build 1 |
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779 | :info:build Warning: Label 215 at (1) defined but not used |
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780 | :info:build pymc/gibbsit.f:2076.5: |
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781 | :info:build |
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782 | :info:build 115 IF (R .GT. .5898437) GO TO 120 |
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783 | :info:build 1 |
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784 | :info:build Warning: Label 115 at (1) defined but not used |
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785 | :info:build pymc/gibbsit.f:2063.5: |
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786 | :info:build |
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787 | :info:build 15 IF (KFLAG.GE.1) GO TO 30 |
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788 | :info:build 1 |
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789 | :info:build Warning: Label 15 at (1) defined but not used |
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790 | :info:build pymc/gibbsit.f:1203.48: |
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791 | :info:build |
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792 | :info:build cutpt = empquant(original,iteracnt,qhat,work) |
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793 | :info:build 1 |
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794 | :info:build Warning: Type mismatch in argument 'work' at (1); passed INTEGER(4) to REAL(8) |
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795 | :info:build gfortran-mp-4.7:f77: build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.f |
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796 | :info:build /opt/local/bin/gfortran-mp-4.7 -Wall -arch x86_64 build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flibmodule.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/fortranobject.o build/temp.macosx-10.8-fat-2.5/pymc/flib.o build/temp.macosx-10.8-fat-2.5/pymc/histogram.o build/temp.macosx-10.8-fat-2.5/pymc/flib_blas.o build/temp.macosx-10.8-fat-2.5/pymc/math.o build/temp.macosx-10.8-fat-2.5/pymc/gibbsit.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.o -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -lgfortran -o build/lib.macosx-10.8-fat-2.5/pymc/flib.so -Wl,-framework -Wl,Accelerate |
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797 | :info:build Undefined symbols for architecture x86_64: |
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798 | :info:build "_PyArg_ParseTupleAndKeywords", referenced from: |
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799 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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800 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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801 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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802 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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803 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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804 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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805 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
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806 | :info:build ... |
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807 | :info:build "_PyCObject_AsVoidPtr", referenced from: |
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808 | :info:build _initflib in flibmodule.o |
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809 | :info:build _F2PyCapsule_AsVoidPtr in fortranobject.o |
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810 | :info:build "_PyCObject_FromVoidPtr", referenced from: |
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811 | :info:build _fortran_getattr in fortranobject.o |
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812 | :info:build _F2PyCapsule_FromVoidPtr in fortranobject.o |
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813 | :info:build "_PyCObject_Type", referenced from: |
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814 | :info:build _initflib in flibmodule.o |
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815 | :info:build _F2PyCapsule_Check in fortranobject.o |
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816 | :info:build "_PyComplex_Type", referenced from: |
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817 | :info:build _int_from_pyobj in flibmodule.o |
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818 | :info:build _double_from_pyobj in flibmodule.o |
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819 | :info:build "_PyDict_DelItemString", referenced from: |
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820 | :info:build _fortran_setattr in fortranobject.o |
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821 | :info:build "_PyDict_GetItemString", referenced from: |
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822 | :info:build _initflib in flibmodule.o |
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823 | :info:build _fortran_getattr in fortranobject.o |
---|
824 | :info:build "_PyDict_New", referenced from: |
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825 | :info:build _PyFortranObject_New in fortranobject.o |
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826 | :info:build _PyFortranObject_NewAsAttr in fortranobject.o |
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827 | :info:build _fortran_setattr in fortranobject.o |
---|
828 | :info:build "_PyDict_SetItemString", referenced from: |
---|
829 | :info:build _initflib in flibmodule.o |
---|
830 | :info:build _F2PyDict_SetItemString in fortranobject.o |
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831 | :info:build _PyFortranObject_New in fortranobject.o |
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832 | :info:build _fortran_getattr in fortranobject.o |
---|
833 | :info:build _fortran_setattr in fortranobject.o |
---|
834 | :info:build "_PyErr_Clear", referenced from: |
---|
835 | :info:build _int_from_pyobj in flibmodule.o |
---|
836 | :info:build _double_from_pyobj in flibmodule.o |
---|
837 | :info:build _F2PyDict_SetItemString in fortranobject.o |
---|
838 | :info:build _fortran_repr in fortranobject.o |
---|
839 | :info:build "_PyErr_Format", referenced from: |
---|
840 | :info:build _initflib in flibmodule.o |
---|
841 | :info:build _fortran_call in fortranobject.o |
---|
842 | :info:build "_PyErr_NewException", referenced from: |
---|
843 | :info:build _initflib in flibmodule.o |
---|
844 | :info:build "_PyErr_Occurred", referenced from: |
---|
845 | :info:build _initflib in flibmodule.o |
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846 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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847 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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848 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
---|
849 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
---|
850 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
---|
851 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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852 | :info:build ... |
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853 | :info:build "_PyErr_Print", referenced from: |
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854 | :info:build _initflib in flibmodule.o |
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855 | :info:build _F2PyDict_SetItemString in fortranobject.o |
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856 | :info:build "_PyErr_SetString", referenced from: |
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857 | :info:build _initflib in flibmodule.o |
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858 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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859 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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860 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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861 | :info:build _f2py_rout_flib_rskewnorm in flibmodule.o |
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862 | :info:build _f2py_rout_flib_uniform_like in flibmodule.o |
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863 | :info:build _f2py_rout_flib_duniform_like in flibmodule.o |
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864 | :info:build ... |
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865 | :info:build "_PyExc_AttributeError", referenced from: |
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866 | :info:build _initflib in flibmodule.o |
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867 | :info:build _fortran_setattr in fortranobject.o |
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868 | :info:build "_PyExc_ImportError", referenced from: |
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869 | :info:build _initflib in flibmodule.o |
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870 | :info:build "_PyExc_MemoryError", referenced from: |
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871 | :info:build _string_from_pyobj in flibmodule.o |
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872 | :info:build "_PyExc_RuntimeError", referenced from: |
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873 | :info:build _initflib in flibmodule.o |
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874 | :info:build _fortran_call in fortranobject.o |
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875 | :info:build "_PyExc_TypeError", referenced from: |
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876 | :info:build _fortran_call in fortranobject.o |
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877 | :info:build _array_from_pyobj in fortranobject.o |
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878 | :info:build "_PyExc_ValueError", referenced from: |
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879 | :info:build _string_from_pyobj in flibmodule.o |
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880 | :info:build _array_from_pyobj in fortranobject.o |
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881 | :info:build "_PyFloat_Type", referenced from: |
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882 | :info:build _double_from_pyobj in flibmodule.o |
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883 | :info:build "_PyImport_ImportModule", referenced from: |
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884 | :info:build _initflib in flibmodule.o |
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885 | :info:build "_PyInt_Type", referenced from: |
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886 | :info:build _int_from_pyobj in flibmodule.o |
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887 | :info:build "_PyMem_Free", referenced from: |
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888 | :info:build _fortran_dealloc in fortranobject.o |
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889 | :info:build "_PyModule_GetDict", referenced from: |
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890 | :info:build _initflib in flibmodule.o |
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891 | :info:build "_PyNumber_Float", referenced from: |
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892 | :info:build _double_from_pyobj in flibmodule.o |
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893 | :info:build "_PyNumber_Int", referenced from: |
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894 | :info:build _int_from_pyobj in flibmodule.o |
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895 | :info:build "_PyObject_GetAttrString", referenced from: |
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896 | :info:build _initflib in flibmodule.o |
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897 | :info:build _int_from_pyobj in flibmodule.o |
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898 | :info:build _double_from_pyobj in flibmodule.o |
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899 | :info:build _fortran_repr in fortranobject.o |
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900 | :info:build "_PyObject_IsTrue", referenced from: |
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901 | :info:build _f2py_rout_flib_constrain in flibmodule.o |
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902 | :info:build "_PyObject_SetAttrString", referenced from: |
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903 | :info:build _initflib in flibmodule.o |
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904 | :info:build "_PyObject_Str", referenced from: |
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905 | :info:build _string_from_pyobj in flibmodule.o |
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906 | :info:build _array_from_pyobj in fortranobject.o |
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907 | :info:build "_PyObject_Type", referenced from: |
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908 | :info:build _array_from_pyobj in fortranobject.o |
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909 | :info:build "_PySequence_Check", referenced from: |
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910 | :info:build _int_from_pyobj in flibmodule.o |
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911 | :info:build _double_from_pyobj in flibmodule.o |
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912 | :info:build "_PySequence_GetItem", referenced from: |
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913 | :info:build _int_from_pyobj in flibmodule.o |
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914 | :info:build _double_from_pyobj in flibmodule.o |
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915 | :info:build "_PyString_AsString", referenced from: |
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916 | :info:build _fortran_repr in fortranobject.o |
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917 | :info:build _array_from_pyobj in fortranobject.o |
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918 | :info:build "_PyString_ConcatAndDel", referenced from: |
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919 | :info:build _fortran_getattr in fortranobject.o |
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920 | :info:build "_PyString_FromFormat", referenced from: |
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921 | :info:build _fortran_repr in fortranobject.o |
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922 | :info:build "_PyString_FromString", referenced from: |
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923 | :info:build _initflib in flibmodule.o |
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924 | :info:build _fortran_getattr in fortranobject.o |
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925 | :info:build _fortran_repr in fortranobject.o |
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926 | :info:build "_PyString_Type", referenced from: |
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927 | :info:build _int_from_pyobj in flibmodule.o |
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928 | :info:build _double_from_pyobj in flibmodule.o |
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929 | :info:build _string_from_pyobj in flibmodule.o |
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930 | :info:build _fortran_repr in fortranobject.o |
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931 | :info:build "_PyType_IsSubtype", referenced from: |
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932 | :info:build _int_from_pyobj in flibmodule.o |
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933 | :info:build _double_from_pyobj in flibmodule.o |
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934 | :info:build _string_from_pyobj in flibmodule.o |
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935 | :info:build _fortran_repr in fortranobject.o |
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936 | :info:build _array_from_pyobj in fortranobject.o |
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937 | :info:build "_PyType_Type", referenced from: |
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938 | :info:build _initflib in flibmodule.o |
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939 | :info:build "_PyUnicode_Type", referenced from: |
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940 | :info:build _int_from_pyobj in flibmodule.o |
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941 | :info:build _double_from_pyobj in flibmodule.o |
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942 | :info:build "_Py_BuildValue", referenced from: |
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943 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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944 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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945 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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946 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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947 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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948 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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949 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
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950 | :info:build ... |
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951 | :info:build "_Py_FindMethod", referenced from: |
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952 | :info:build _fortran_getattr in fortranobject.o |
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953 | :info:build "_Py_InitModule4_64", referenced from: |
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954 | :info:build _initflib in flibmodule.o |
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955 | :info:build "__PyObject_New", referenced from: |
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956 | :info:build _PyFortranObject_New in fortranobject.o |
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957 | :info:build _PyFortranObject_NewAsAttr in fortranobject.o |
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958 | :info:build "__Py_NoneStruct", referenced from: |
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959 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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960 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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961 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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962 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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963 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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964 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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965 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
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966 | :info:build ... |
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967 | :info:build ld: symbol(s) not found for architecture x86_64 |
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968 | :info:build collect2: error: ld returned 1 exit status |
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969 | :info:build Undefined symbols for architecture x86_64: |
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970 | :info:build "_PyArg_ParseTupleAndKeywords", referenced from: |
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971 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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972 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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973 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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974 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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975 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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976 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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977 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
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978 | :info:build ... |
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979 | :info:build "_PyCObject_AsVoidPtr", referenced from: |
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980 | :info:build _initflib in flibmodule.o |
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981 | :info:build _F2PyCapsule_AsVoidPtr in fortranobject.o |
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982 | :info:build "_PyCObject_FromVoidPtr", referenced from: |
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983 | :info:build _fortran_getattr in fortranobject.o |
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984 | :info:build _F2PyCapsule_FromVoidPtr in fortranobject.o |
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985 | :info:build "_PyCObject_Type", referenced from: |
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986 | :info:build _initflib in flibmodule.o |
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987 | :info:build _F2PyCapsule_Check in fortranobject.o |
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988 | :info:build "_PyComplex_Type", referenced from: |
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989 | :info:build _int_from_pyobj in flibmodule.o |
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990 | :info:build _double_from_pyobj in flibmodule.o |
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991 | :info:build "_PyDict_DelItemString", referenced from: |
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992 | :info:build _fortran_setattr in fortranobject.o |
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993 | :info:build "_PyDict_GetItemString", referenced from: |
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994 | :info:build _initflib in flibmodule.o |
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995 | :info:build _fortran_getattr in fortranobject.o |
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996 | :info:build "_PyDict_New", referenced from: |
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997 | :info:build _PyFortranObject_New in fortranobject.o |
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998 | :info:build _PyFortranObject_NewAsAttr in fortranobject.o |
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999 | :info:build _fortran_setattr in fortranobject.o |
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1000 | :info:build "_PyDict_SetItemString", referenced from: |
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1001 | :info:build _initflib in flibmodule.o |
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1002 | :info:build _F2PyDict_SetItemString in fortranobject.o |
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1003 | :info:build _PyFortranObject_New in fortranobject.o |
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1004 | :info:build _fortran_getattr in fortranobject.o |
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1005 | :info:build _fortran_setattr in fortranobject.o |
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1006 | :info:build "_PyErr_Clear", referenced from: |
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1007 | :info:build _int_from_pyobj in flibmodule.o |
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1008 | :info:build _double_from_pyobj in flibmodule.o |
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1009 | :info:build _F2PyDict_SetItemString in fortranobject.o |
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1010 | :info:build _fortran_repr in fortranobject.o |
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1011 | :info:build "_PyErr_Format", referenced from: |
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1012 | :info:build _initflib in flibmodule.o |
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1013 | :info:build _fortran_call in fortranobject.o |
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1015 | :info:build _initflib in flibmodule.o |
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1016 | :info:build "_PyErr_Occurred", referenced from: |
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1017 | :info:build _initflib in flibmodule.o |
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1019 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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1020 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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1021 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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1022 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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1023 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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1024 | :info:build ... |
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1025 | :info:build "_PyErr_Print", referenced from: |
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1026 | :info:build _initflib in flibmodule.o |
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1027 | :info:build _F2PyDict_SetItemString in fortranobject.o |
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1028 | :info:build "_PyErr_SetString", referenced from: |
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1029 | :info:build _initflib in flibmodule.o |
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1030 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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1031 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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1032 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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1033 | :info:build _f2py_rout_flib_rskewnorm in flibmodule.o |
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1034 | :info:build _f2py_rout_flib_uniform_like in flibmodule.o |
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1035 | :info:build _f2py_rout_flib_duniform_like in flibmodule.o |
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1036 | :info:build ... |
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1037 | :info:build "_PyExc_AttributeError", referenced from: |
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1038 | :info:build _initflib in flibmodule.o |
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1039 | :info:build _fortran_setattr in fortranobject.o |
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1040 | :info:build "_PyExc_ImportError", referenced from: |
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1041 | :info:build _initflib in flibmodule.o |
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1042 | :info:build "_PyExc_MemoryError", referenced from: |
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1043 | :info:build _string_from_pyobj in flibmodule.o |
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1044 | :info:build "_PyExc_RuntimeError", referenced from: |
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1045 | :info:build _initflib in flibmodule.o |
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1046 | :info:build _fortran_call in fortranobject.o |
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1047 | :info:build "_PyExc_TypeError", referenced from: |
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1048 | :info:build _fortran_call in fortranobject.o |
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1049 | :info:build _array_from_pyobj in fortranobject.o |
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1050 | :info:build "_PyExc_ValueError", referenced from: |
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1051 | :info:build _string_from_pyobj in flibmodule.o |
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1052 | :info:build _array_from_pyobj in fortranobject.o |
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1053 | :info:build "_PyFloat_Type", referenced from: |
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1054 | :info:build _double_from_pyobj in flibmodule.o |
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1055 | :info:build "_PyImport_ImportModule", referenced from: |
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1056 | :info:build _initflib in flibmodule.o |
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1057 | :info:build "_PyInt_Type", referenced from: |
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1058 | :info:build _int_from_pyobj in flibmodule.o |
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1059 | :info:build "_PyMem_Free", referenced from: |
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1060 | :info:build _fortran_dealloc in fortranobject.o |
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1061 | :info:build "_PyModule_GetDict", referenced from: |
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1062 | :info:build _initflib in flibmodule.o |
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1063 | :info:build "_PyNumber_Float", referenced from: |
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1064 | :info:build _double_from_pyobj in flibmodule.o |
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1065 | :info:build "_PyNumber_Int", referenced from: |
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1066 | :info:build _int_from_pyobj in flibmodule.o |
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1067 | :info:build "_PyObject_GetAttrString", referenced from: |
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1068 | :info:build _initflib in flibmodule.o |
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1069 | :info:build _int_from_pyobj in flibmodule.o |
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1070 | :info:build _double_from_pyobj in flibmodule.o |
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1071 | :info:build _fortran_repr in fortranobject.o |
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1072 | :info:build "_PyObject_IsTrue", referenced from: |
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1073 | :info:build _f2py_rout_flib_constrain in flibmodule.o |
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1074 | :info:build "_PyObject_SetAttrString", referenced from: |
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1075 | :info:build _initflib in flibmodule.o |
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1076 | :info:build "_PyObject_Str", referenced from: |
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1077 | :info:build _string_from_pyobj in flibmodule.o |
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1078 | :info:build _array_from_pyobj in fortranobject.o |
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1079 | :info:build "_PyObject_Type", referenced from: |
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1080 | :info:build _array_from_pyobj in fortranobject.o |
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1081 | :info:build "_PySequence_Check", referenced from: |
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1082 | :info:build _int_from_pyobj in flibmodule.o |
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1083 | :info:build _double_from_pyobj in flibmodule.o |
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1084 | :info:build "_PySequence_GetItem", referenced from: |
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1085 | :info:build _int_from_pyobj in flibmodule.o |
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1086 | :info:build _double_from_pyobj in flibmodule.o |
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1087 | :info:build "_PyString_AsString", referenced from: |
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1088 | :info:build _fortran_repr in fortranobject.o |
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1089 | :info:build _array_from_pyobj in fortranobject.o |
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1090 | :info:build "_PyString_ConcatAndDel", referenced from: |
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1091 | :info:build _fortran_getattr in fortranobject.o |
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1092 | :info:build "_PyString_FromFormat", referenced from: |
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1093 | :info:build _fortran_repr in fortranobject.o |
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1094 | :info:build "_PyString_FromString", referenced from: |
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1095 | :info:build _initflib in flibmodule.o |
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1096 | :info:build _fortran_getattr in fortranobject.o |
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1097 | :info:build _fortran_repr in fortranobject.o |
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1098 | :info:build "_PyString_Type", referenced from: |
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1099 | :info:build _int_from_pyobj in flibmodule.o |
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1100 | :info:build _double_from_pyobj in flibmodule.o |
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1101 | :info:build _string_from_pyobj in flibmodule.o |
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1102 | :info:build _fortran_repr in fortranobject.o |
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1103 | :info:build "_PyType_IsSubtype", referenced from: |
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1104 | :info:build _int_from_pyobj in flibmodule.o |
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1105 | :info:build _double_from_pyobj in flibmodule.o |
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1106 | :info:build _string_from_pyobj in flibmodule.o |
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1107 | :info:build _fortran_repr in fortranobject.o |
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1108 | :info:build _array_from_pyobj in fortranobject.o |
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1109 | :info:build "_PyType_Type", referenced from: |
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1110 | :info:build _initflib in flibmodule.o |
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1111 | :info:build "_PyUnicode_Type", referenced from: |
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1112 | :info:build _int_from_pyobj in flibmodule.o |
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1113 | :info:build _double_from_pyobj in flibmodule.o |
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1114 | :info:build "_Py_BuildValue", referenced from: |
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1115 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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1116 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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1117 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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1118 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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1119 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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1120 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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1121 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
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1122 | :info:build ... |
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1123 | :info:build "_Py_FindMethod", referenced from: |
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1124 | :info:build _fortran_getattr in fortranobject.o |
---|
1125 | :info:build "_Py_InitModule4_64", referenced from: |
---|
1126 | :info:build _initflib in flibmodule.o |
---|
1127 | :info:build "__PyObject_New", referenced from: |
---|
1128 | :info:build _PyFortranObject_New in fortranobject.o |
---|
1129 | :info:build _PyFortranObject_NewAsAttr in fortranobject.o |
---|
1130 | :info:build "__Py_NoneStruct", referenced from: |
---|
1131 | :info:build _f2py_rout_flib_logsum in flibmodule.o |
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1132 | :info:build _f2py_rout_flib_combinationln in flibmodule.o |
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1133 | :info:build _f2py_rout_flib_expand_triangular in flibmodule.o |
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1134 | :info:build _f2py_rout_flib_standardize in flibmodule.o |
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1135 | :info:build _f2py_rout_flib_gammln in flibmodule.o |
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1136 | :info:build _f2py_rout_flib_mvgammln in flibmodule.o |
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1137 | :info:build _f2py_rout_flib_factrl in flibmodule.o |
---|
1138 | :info:build ... |
---|
1139 | :info:build ld: symbol(s) not found for architecture x86_64 |
---|
1140 | :info:build collect2: error: ld returned 1 exit status |
---|
1141 | :info:build error: Command "/opt/local/bin/gfortran-mp-4.7 -Wall -arch x86_64 build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flibmodule.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/fortranobject.o build/temp.macosx-10.8-fat-2.5/pymc/flib.o build/temp.macosx-10.8-fat-2.5/pymc/histogram.o build/temp.macosx-10.8-fat-2.5/pymc/flib_blas.o build/temp.macosx-10.8-fat-2.5/pymc/math.o build/temp.macosx-10.8-fat-2.5/pymc/gibbsit.o build/temp.macosx-10.8-fat-2.5/build/src.macosx-10.8-fat-2.5/pymc/flib-f2pywrappers.o -L/opt/local/lib/gcc47/gcc/x86_64-apple-darwin12/4.7.2 -lgfortran -o build/lib.macosx-10.8-fat-2.5/pymc/flib.so -Wl,-framework -Wl,Accelerate" failed with exit status 1 |
---|
1142 | :info:build Command failed: cd "/opt/local/var/macports/build/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/work/pymc-2.0" && /opt/local/bin/python2.5 setup.py --no-user-cfg build |
---|
1143 | :info:build Exit code: 1 |
---|
1144 | :error:build org.macports.build for port py25-pymc returned: command execution failed |
---|
1145 | :debug:build Error code: CHILDSTATUS 19558 1 |
---|
1146 | :debug:build Backtrace: command execution failed |
---|
1147 | while executing |
---|
1148 | "system -nice 10 $fullcmdstring" |
---|
1149 | ("eval" body line 1) |
---|
1150 | invoked from within |
---|
1151 | "eval system $notty $nice \$fullcmdstring" |
---|
1152 | invoked from within |
---|
1153 | "command_exec build" |
---|
1154 | (procedure "portbuild::build_main" line 8) |
---|
1155 | invoked from within |
---|
1156 | "$procedure $targetname" |
---|
1157 | :info:build Warning: targets not executed for py25-pymc: org.macports.build |
---|
1158 | :notice:build Please see the log file for port py25-pymc for details: |
---|
1159 | /opt/local/var/macports/logs/_Users_rschmidt_macports_dports_python_py25-pymc/py25-pymc/main.log |
---|