1 | # -*- coding: utf-8; mode: tcl; tab-width: 4; truncate-lines: t; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:et:sw=4:ts=4:sts=4 |
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2 | # $Id$ |
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3 | |
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4 | PortSystem 1.0 |
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5 | PortGroup python 1.0 |
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6 | PortGroup github 1.0 |
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7 | github.setup ecell ecell3 c63b469914ebd7990a643632181d1a9be1fe99f2 |
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8 | |
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9 | name py-ecell3 |
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10 | revision 0 |
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11 | |
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12 | |
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13 | categories science |
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14 | maintainers sfc.keio.ac.jp:ynaito |
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15 | license GPLv2 |
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16 | homepage http://www.e-cell.org/ |
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17 | |
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18 | description E-Cell Simulation Environment (E-Cell SE) |
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19 | long_description E-Cell System is an object-oriented software suite \ |
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20 | for modeling, simulation, and analysis of large scale complex systems \ |
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21 | such as biological cells. Core part of the system, E-Cell Simulation \ |
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22 | Environment version 3, allows many components driven by multiple \ |
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23 | algorithms with different timescales to coexist. |
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24 | |
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25 | default_variants +python${python.version} -atlas -gcc43 -gcc44 -gcc45 -no_single -no_static |
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26 | |
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27 | checksums md5 0652e3fda892e9e98db177340df5b210 \ |
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28 | sha1 5e1cbaebbbceab1700276aaa39de38dba4e3e972 \ |
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29 | rmd160 deceb28559a2dc988d9ec8a5329e3f8d9bc19945 |
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30 | |
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31 | python.versions 26 27 |
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32 | python.default_version 27 |
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33 | |
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34 | if {${subport} != ${name}} { |
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35 | |
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36 | categories science |
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37 | dist_subdir ${name} |
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38 | python.add_archflags no |
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39 | use_configure yes |
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40 | build.cmd make |
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41 | build.target all |
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42 | destroot.cmd ${build.cmd} |
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43 | destroot.target install |
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44 | destroot.destdir DESTDIR=${destroot} |
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45 | pre-destroot {} |
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46 | extract.asroot yes |
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47 | |
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48 | patchfiles patch-pyecell_setup.py.in.diff\ |
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49 | patch-DigitalWindow.py.diff\ |
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50 | patch-Drosophila-python.em.diff\ |
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51 | patch-Makefile.am.diff\ |
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52 | patch-_ecs.cpp.diff |
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53 | |
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54 | depends_lib port:py${python.version}-pygtk \ |
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55 | port:py${python.version}-numpy \ |
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56 | path:lib/libboost_python-mt.a:boost \ |
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57 | port:gsl \ |
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58 | port:py${python.version}-ply |
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59 | |
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60 | depends_build port:libtool \ |
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61 | port:autoconf \ |
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62 | port:automake |
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63 | |
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64 | set env_ARCHFLAGS "ARCHFLAGS=\"-arch ${build_arch}\"" |
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65 | set env_PYTHONPATH "PYTHONPATH=\"${prefix}/Library/Frameworks/Python.framework/Versions/${python.branch}/lib/python${python.branch}/site-packages:${prefix}/lib/python${python.branch}/site-packages\"" |
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66 | configure.env-append ${env_PYTHONPATH} |
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67 | build.env-append "${env_ARCHFLAGS} ${env_PYTHONPATH}" |
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68 | |
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69 | if {${configure.compiler} == "clang"} { |
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70 | configure.compiler llvm-gcc-4.2 |
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71 | } |
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72 | |
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73 | notes \ |
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74 | "************************************************************************** |
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75 | To use ecell3-session-monitor, please set environment |
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76 | variable PYTHONPATH as following: |
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77 | |
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78 | For sh, bash: |
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79 | export PYTHONPATH=\"${prefix}/Library/Frameworks/Python.framework/\\ |
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80 | Versions/${python.branch}/lib/python${python.branch}/site-packages:${prefix}/lib/python${python.branch}/site-packages\" |
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81 | |
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82 | For csh, tcsh: |
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83 | setenv PYTHONPATH \"${prefix}/Library/Frameworks/Python.framework/\\ |
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84 | Versions/${python.branch}/lib/python${python.branch}/site-packages:${prefix}/lib/python${python.branch}/site-packages\" |
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85 | **************************************************************************" |
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86 | |
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87 | |
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88 | pre-fetch { |
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89 | |
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90 | if {![file exists ${prefix}/lib/libboost_python-mt.a]} { |
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91 | if {[file exists ${prefix}/lib/libboost_filesystem-mt.a]} { |
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92 | ui_error "Please uninstall or deactivate the boost port and reinstall it by running `port install boost +python${python.version}`." |
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93 | } else { |
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94 | ui_error "Please install boost with the python${python.version} variant by running `port install boost +python${python.version}`." |
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95 | } |
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96 | error "boost must be installed with the python${python.version} variant enabled." |
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97 | } |
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98 | |
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99 | } |
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100 | |
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101 | |
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102 | pre-extract { |
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103 | if {![file exists ${prefix}/lib/libboost_python.a] && [file exists ${prefix}/lib/libboost_python-mt.a]} { |
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104 | ln -s ${prefix}/lib/libboost_python-mt.a ${prefix}/lib/libboost_python.a |
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105 | } |
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106 | if {![file exists ${prefix}/lib/libboost_python.dylib] && [file exists ${prefix}/lib/libboost_python-mt.dylib]} { |
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107 | ln -s ${prefix}/lib/libboost_python-mt.dylib ${prefix}/lib/libboost_python.dylib |
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108 | } |
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109 | |
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110 | } |
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111 | |
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112 | |
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113 | pre-configure { |
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114 | system "cd ${worksrcpath} && ./autogen.sh" |
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115 | } |
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116 | |
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117 | pre-build { |
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118 | } |
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119 | |
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120 | post-destroot { |
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121 | } |
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122 | |
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123 | } |
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