Ticket #42306: dolfin_main.log

File dolfin_main.log, 114.0 KB (added by peter.lichtner@…, 11 years ago)
Line 
1version:1
2:debug:main epoch: in tree: 0 installed: 0
3:debug:main cmake 2.8.12_3 exists in the ports tree
4:debug:main cmake 2.8.12_3  is the latest installed
5:debug:main cmake 2.8.12_3  is active
6:debug:main Merging existing variants '' into variants
7:debug:main new fully merged portvariants:
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cmake
9:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
10:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
11:debug:main universal variant already exists, so not adding the default one
12:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
13:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
14:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
15:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
16:debug:main No need to upgrade! cmake 2.8.12_3 >= cmake 2.8.12_3
17:debug:main epoch: in tree: 0 installed: 0
18:debug:main libidn 1.26_0 exists in the ports tree
19:debug:main libidn 1.26_0  is the latest installed
20:debug:main libidn 1.26_0  is active
21:debug:main Merging existing variants '' into variants
22:debug:main new fully merged portvariants:
23:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/mail/libidn
24:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
25:debug:main adding the default universal variant
26:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
27:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
28:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
29:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
30:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
31:debug:main No need to upgrade! libidn 1.26_0 >= libidn 1.26_0
32:debug:main epoch: in tree: 0 installed: 0
33:debug:main libiconv 1.14_0 exists in the ports tree
34:debug:main libiconv 1.14_0  is the latest installed
35:debug:main libiconv 1.14_0  is active
36:debug:main Merging existing variants '' into variants
37:debug:main new fully merged portvariants:
38:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv
39:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
40:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
41:debug:main universal variant already exists, so not adding the default one
42:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
43:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
44:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
45:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
46:debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
47:debug:main epoch: in tree: 0 installed: 0
48:debug:main gettext 0.18.3.2_0 exists in the ports tree
49:debug:main gettext 0.18.3.2_0  is the latest installed
50:debug:main gettext 0.18.3.2_0  is active
51:debug:main Merging existing variants '' into variants
52:debug:main new fully merged portvariants:
53:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext
54:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
55:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
56:debug:main compiler clang 500.2.79 not blacklisted because it doesn't match {clang < 211.10.1}
57:debug:main universal variant already exists, so not adding the default one
58:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
59:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
60:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
61:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
62:debug:main No need to upgrade! gettext 0.18.3.2_0 >= gettext 0.18.3.2_0
63:debug:main epoch: in tree: 0 installed: 0
64:debug:main expat 2.1.0_0 exists in the ports tree
65:debug:main expat 2.1.0_0  is the latest installed
66:debug:main expat 2.1.0_0  is active
67:debug:main Merging existing variants '' into variants
68:debug:main new fully merged portvariants:
69:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat
70:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
71:debug:main adding the default universal variant
72:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
73:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
74:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
75:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
76:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
77:debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0
78:debug:main epoch: in tree: 0 installed: 0
79:debug:main ncurses 5.9_2 exists in the ports tree
80:debug:main ncurses 5.9_2  is the latest installed
81:debug:main ncurses 5.9_2  is active
82:debug:main Merging existing variants '' into variants
83:debug:main new fully merged portvariants:
84:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses
85:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
86:debug:main adding the default universal variant
87:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
88:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
89:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
90:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
91:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
92:debug:main No need to upgrade! ncurses 5.9_2 >= ncurses 5.9_2
93:debug:main epoch: in tree: 1 installed: 1
94:debug:main openssl 1.0.1f_0 exists in the ports tree
95:debug:main openssl 1.0.1f_0  is the latest installed
96:debug:main openssl 1.0.1f_0  is active
97:debug:main Merging existing variants '' into variants
98:debug:main new fully merged portvariants:
99:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl
100:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
101:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
102:debug:main universal variant already exists, so not adding the default one
103:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
104:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
105:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
106:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
107:debug:main No need to upgrade! openssl 1.0.1f_0 >= openssl 1.0.1f_0
108:debug:main epoch: in tree: 0 installed: 0
109:debug:main zlib 1.2.8_0 exists in the ports tree
110:debug:main zlib 1.2.8_0  is the latest installed
111:debug:main zlib 1.2.8_0  is active
112:debug:main Merging existing variants '' into variants
113:debug:main new fully merged portvariants:
114:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib
115:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
116:debug:main adding the default universal variant
117:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
118:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
119:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
120:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
121:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
122:debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0
123:debug:main epoch: in tree: 0 installed: 0
124:debug:main py27-ply 3.4_1 exists in the ports tree
125:debug:main py27-ply 3.4_1  is the latest installed
126:debug:main py27-ply 3.4_1  is active
127:debug:main Merging existing variants '' into variants
128:debug:main new fully merged portvariants:
129:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-ply
130:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
131:debug:main Re-registering default for build.cmd
132:debug:main Re-registering default for destroot.cmd
133:debug:main Re-registering default for destroot.destdir
134:debug:main only one arch supported, so not adding the default universal variant
135:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
136:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
137:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
138:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
139:debug:main No need to upgrade! py27-ply 3.4_1 >= py27-ply 3.4_1
140:debug:main epoch: in tree: 2 installed: 2
141:debug:main python27 2.7.6_0 exists in the ports tree
142:debug:main python27 2.7.6_0  is the latest installed
143:debug:main python27 2.7.6_0  is active
144:debug:main Merging existing variants '' into variants
145:debug:main new fully merged portvariants:
146:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27
147:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
148:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
149:debug:main universal variant already exists, so not adding the default one
150:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
151:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
152:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
153:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
154:debug:main No need to upgrade! python27 2.7.6_0 >= python27 2.7.6_0
155:debug:main epoch: in tree: 0 installed: 0
156:debug:main sqlite3 3.8.2_0 exists in the ports tree
157:debug:main sqlite3 3.8.2_0  is the latest installed
158:debug:main sqlite3 3.8.2_0  is active
159:debug:main Merging existing variants '' into variants
160:debug:main new fully merged portvariants:
161:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3
162:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
163:debug:main adding the default universal variant
164:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
165:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
166:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
167:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
168:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
169:debug:main No need to upgrade! sqlite3 3.8.2_0 >= sqlite3 3.8.2_0
170:debug:main epoch: in tree: 20090923 installed: 20090923
171:debug:main libedit 20121213-3.0_0 exists in the ports tree
172:debug:main libedit 20121213-3.0_0  is the latest installed
173:debug:main libedit 20121213-3.0_0  is active
174:debug:main Merging existing variants '' into variants
175:debug:main new fully merged portvariants:
176:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit
177:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
178:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
179:debug:main universal variant already exists, so not adding the default one
180:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
181:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
182:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
183:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
184:debug:main No need to upgrade! libedit 20121213-3.0_0 >= libedit 20121213-3.0_0
185:debug:main epoch: in tree: 0 installed: 0
186:debug:main db46 4.6.21_9 exists in the ports tree
187:debug:main db46 4.6.21_9  is the latest installed
188:debug:main db46 4.6.21_9  is active
189:debug:main Merging existing variants '' into variants
190:debug:main new fully merged portvariants:
191:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db46
192:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
193:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
194:debug:main universal variant already exists, so not adding the default one
195:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
196:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
197:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
198:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
199:debug:main No need to upgrade! db46 4.6.21_9 >= db46 4.6.21_9
200:debug:main epoch: in tree: 0 installed: 0
201:debug:main db_select 0.1_2 exists in the ports tree
202:debug:main db_select 0.1_2  is the latest installed
203:debug:main db_select 0.1_2  is active
204:debug:main Merging existing variants '' into variants
205:debug:main new fully merged portvariants:
206:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/db_select
207:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
208:debug:main universal_variant is false, so not adding the default universal variant
209:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
210:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
211:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
212:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
213:debug:main No need to upgrade! db_select 0.1_2 >= db_select 0.1_2
214:debug:main epoch: in tree: 0 installed: 0
215:debug:main bzip2 1.0.6_0 exists in the ports tree
216:debug:main bzip2 1.0.6_0  is the latest installed
217:debug:main bzip2 1.0.6_0  is active
218:debug:main Merging existing variants '' into variants
219:debug:main new fully merged portvariants:
220:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2
221:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
222:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
223:debug:main universal variant already exists, so not adding the default one
224:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
225:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
226:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
227:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
228:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
229:debug:main epoch: in tree: 0 installed: 0
230:debug:main python_select 0.3_3 exists in the ports tree
231:debug:main python_select 0.3_3  is the latest installed
232:debug:main python_select 0.3_3  is active
233:debug:main Merging existing variants '' into variants
234:debug:main new fully merged portvariants:
235:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select
236:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
237:debug:main universal_variant is false, so not adding the default universal variant
238:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
239:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
240:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
241:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
242:debug:main No need to upgrade! python_select 0.3_3 >= python_select 0.3_3
243:debug:main epoch: in tree: 0 installed: 0
244:debug:main armadillo 4.000.2_0 exists in the ports tree
245:debug:main armadillo 4.000.2_0  is the latest installed
246:debug:main armadillo 4.000.2_0  is active
247:debug:main Merging existing variants '' into variants
248:debug:main new fully merged portvariants:
249:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/armadillo
250:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
251:debug:main adding the default universal variant
252:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
253:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
254:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
255:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
256:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
257:debug:main No need to upgrade! armadillo 4.000.2_0 >= armadillo 4.000.2_0
258:debug:main epoch: in tree: 0 installed: 0
259:debug:main boost 1.55.0_1 exists in the ports tree
260:debug:main boost 1.55.0_1 +mpich+no_single+no_static+python27 is the latest installed
261:debug:main boost 1.55.0_1 +mpich+no_single+no_static+python27 is active
262:debug:main Merging existing variants '+mpich+no_single+no_static+python27' into variants
263:debug:main new fully merged portvariants: no_static + mpich + no_single + python27 +
264:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/boost
265:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
266:debug:main compiler clang 500.2.79 not blacklisted because it doesn't match {clang < 421}
267:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
268:debug:main universal variant already exists, so not adding the default one
269:debug:main Executing variant mpich provides mpich
270:debug:main Executing variant python27 provides python27
271:debug:main Executing variant no_static provides no_static
272:debug:main Executing variant no_single provides no_single
273:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
274:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
275:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
276:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
277:debug:main No need to upgrade! boost 1.55.0_1 >= boost 1.55.0_1
278:debug:main epoch: in tree: 0 installed: 0
279:debug:main icu 51.2_1 exists in the ports tree
280:debug:main icu 51.2_1  is the latest installed
281:debug:main icu 51.2_1  is active
282:debug:main Merging existing variants '' into variants
283:debug:main new fully merged portvariants:
284:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/icu
285:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
286:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
287:debug:main universal variant already exists, so not adding the default one
288:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
289:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
290:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
291:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
292:debug:main No need to upgrade! icu 51.2_1 >= icu 51.2_1
293:debug:main epoch: in tree: 0 installed: 0
294:debug:main mpich-default 3.0.4_10 exists in the ports tree
295:debug:main mpich-default 3.0.4_10 +gcc48 is the latest installed
296:debug:main mpich-default 3.0.4_10 +gcc48 is active
297:debug:main Merging existing variants '+gcc48' into variants
298:debug:main new fully merged portvariants: gcc48 +
299:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/mpich
300:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
301:debug:main compiler clang 500.2.79 not blacklisted because it doesn't match {clang >= 421.11.66 < 425.0.24}
302:debug:main universal_variant is false, so not adding the default universal variant
303:debug:main Executing variant gcc48 provides gcc48
304:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
305:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
306:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
307:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
308:debug:main No need to upgrade! mpich-default 3.0.4_10 >= mpich-default 3.0.4_10
309:debug:main epoch: in tree: 0 installed: 0
310:debug:main libxml2 2.9.1_0 exists in the ports tree
311:debug:main libxml2 2.9.1_0  is the latest installed
312:debug:main libxml2 2.9.1_0  is active
313:debug:main Merging existing variants '' into variants
314:debug:main new fully merged portvariants:
315:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxml2
316:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
317:debug:main adding the default universal variant
318:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
319:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
320:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
321:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
322:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
323:debug:main No need to upgrade! libxml2 2.9.1_0 >= libxml2 2.9.1_0
324:debug:main epoch: in tree: 0 installed: 0
325:debug:main xz 5.0.5_0 exists in the ports tree
326:debug:main xz 5.0.5_0  is the latest installed
327:debug:main xz 5.0.5_0  is active
328:debug:main Merging existing variants '' into variants
329:debug:main new fully merged portvariants:
330:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/xz
331:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
332:debug:main adding the default universal variant
333:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
334:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
335:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
336:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
337:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
338:debug:main No need to upgrade! xz 5.0.5_0 >= xz 5.0.5_0
339:debug:main epoch: in tree: 0 installed: 0
340:debug:main mpi-doc 3.0.4_0 exists in the ports tree
341:debug:main mpi-doc 3.0.4_0  is the latest installed
342:debug:main mpi-doc 3.0.4_0  is active
343:debug:main Merging existing variants '' into variants
344:debug:main new fully merged portvariants:
345:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/mpi-doc
346:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
347:debug:main universal_variant is false, so not adding the default universal variant
348:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
349:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
350:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
351:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
352:debug:main No need to upgrade! mpi-doc 3.0.4_0 >= mpi-doc 3.0.4_0
353:debug:main epoch: in tree: 2 installed: 2
354:debug:main libgcc 4.8.2_0 exists in the ports tree
355:debug:main libgcc 4.8.2_0  is the latest installed
356:debug:main libgcc 4.8.2_0  is active
357:debug:main Merging existing variants '' into variants
358:debug:main new fully merged portvariants:
359:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/gcc48
360:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
361:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
362:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
363:debug:main universal variant already exists, so not adding the default one
364:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
365:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
366:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
367:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
368:debug:main No need to upgrade! libgcc 4.8.2_0 >= libgcc 4.8.2_0
369:debug:main epoch: in tree: 0 installed: 0
370:debug:main gmp 5.1.2_0 exists in the ports tree
371:debug:main gmp 5.1.2_0  is the latest installed
372:debug:main gmp 5.1.2_0  is active
373:debug:main Merging existing variants '' into variants
374:debug:main new fully merged portvariants:
375:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gmp
376:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
377:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
378:debug:main universal variant already exists, so not adding the default one
379:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
380:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
381:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
382:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
383:debug:main No need to upgrade! gmp 5.1.2_0 >= gmp 5.1.2_0
384:debug:main epoch: in tree: 0 installed: 0
385:debug:main mpfr 3.1.1-p2_0 exists in the ports tree
386:debug:main mpfr 3.1.1-p2_0  is the latest installed
387:debug:main mpfr 3.1.1-p2_0  is active
388:debug:main Merging existing variants '' into variants
389:debug:main new fully merged portvariants:
390:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/mpfr
391:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
392:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
393:debug:main universal variant already exists, so not adding the default one
394:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
395:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
396:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
397:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
398:debug:main No need to upgrade! mpfr 3.1.1-p2_0 >= mpfr 3.1.1-p2_0
399:debug:main epoch: in tree: 0 installed: 0
400:debug:main libmpc 1.0.2_0 exists in the ports tree
401:debug:main libmpc 1.0.2_0  is the latest installed
402:debug:main libmpc 1.0.2_0  is active
403:debug:main Merging existing variants '' into variants
404:debug:main new fully merged portvariants:
405:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libmpc
406:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
407:debug:main adding the default universal variant
408:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
409:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
410:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
411:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
412:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
413:debug:main No need to upgrade! libmpc 1.0.2_0 >= libmpc 1.0.2_0
414:debug:main epoch: in tree: 1 installed: 1
415:debug:main cloog 0.18.0_0 exists in the ports tree
416:debug:main cloog 0.18.0_0  is the latest installed
417:debug:main cloog 0.18.0_0  is active
418:debug:main Merging existing variants '' into variants
419:debug:main new fully merged portvariants:
420:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cloog
421:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
422:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
423:debug:main universal variant already exists, so not adding the default one
424:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
425:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
426:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
427:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
428:debug:main No need to upgrade! cloog 0.18.0_0 >= cloog 0.18.0_0
429:debug:main epoch: in tree: 1 installed: 1
430:debug:main isl 0.12_0 exists in the ports tree
431:debug:main isl 0.12_0  is the latest installed
432:debug:main isl 0.12_0  is active
433:debug:main Merging existing variants '' into variants
434:debug:main new fully merged portvariants:
435:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/isl
436:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
437:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
438:debug:main universal variant already exists, so not adding the default one
439:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
440:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
441:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
442:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
443:debug:main No need to upgrade! isl 0.12_0 >= isl 0.12_0
444:debug:main epoch: in tree: 0 installed: 0
445:debug:main gcc_select 0.1_8 exists in the ports tree
446:debug:main gcc_select 0.1_8  is the latest installed
447:debug:main gcc_select 0.1_8  is active
448:debug:main Merging existing variants '' into variants
449:debug:main new fully merged portvariants:
450:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/gcc_select
451:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
452:debug:main universal_variant is false, so not adding the default universal variant
453:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
454:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
455:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
456:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
457:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
458:debug:main epoch: in tree: 0 installed: 0
459:debug:main ld64 136_2 exists in the ports tree
460:debug:main ld64 136_2 +llvm33 is the latest installed
461:debug:main ld64 136_2 +llvm33 is active
462:debug:main Merging existing variants '+llvm33' into variants
463:debug:main new fully merged portvariants: llvm33 +
464:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ld64
465:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
466:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
467:debug:main universal variant already exists, so not adding the default one
468:debug:main Executing variant llvm33 provides llvm33
469:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
470:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
471:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
472:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
473:debug:main No need to upgrade! ld64 136_2 >= ld64 136_2
474:debug:main epoch: in tree: 1 installed: 1
475:debug:main llvm-3.3 3.3_1 exists in the ports tree
476:debug:main llvm-3.3 3.3_1  is the latest installed
477:debug:main llvm-3.3 3.3_1  is active
478:debug:main Merging existing variants '' into variants
479:debug:main new fully merged portvariants:
480:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/llvm-3.3
481:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
482:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
483:debug:main universal variant already exists, so not adding the default one
484:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
485:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
486:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
487:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
488:debug:main No need to upgrade! llvm-3.3 3.3_1 >= llvm-3.3 3.3_1
489:debug:main epoch: in tree: 0 installed: 0
490:debug:main libffi 3.0.13_0 exists in the ports tree
491:debug:main libffi 3.0.13_0  is the latest installed
492:debug:main libffi 3.0.13_0  is active
493:debug:main Merging existing variants '' into variants
494:debug:main new fully merged portvariants:
495:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libffi
496:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
497:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
498:debug:main universal variant already exists, so not adding the default one
499:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
500:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
501:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
502:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
503:debug:main No need to upgrade! libffi 3.0.13_0 >= libffi 3.0.13_0
504:debug:main epoch: in tree: 0 installed: 0
505:debug:main perl5 5.12.4_0 exists in the ports tree
506:debug:main perl5 5.12.4_0 +perl5_12 is the latest installed
507:debug:main perl5 5.12.4_0 +perl5_12 is active
508:debug:main Merging existing variants '+perl5_12' into variants
509:debug:main new fully merged portvariants: perl5_12 +
510:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
511:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
512:debug:main universal_variant is false, so not adding the default universal variant
513:debug:main Executing variant perl5_12 provides perl5_12
514:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
515:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
516:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
517:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
518:debug:main No need to upgrade! perl5 5.12.4_0 >= perl5 5.12.4_0
519:debug:main epoch: in tree: 0 installed: 0
520:debug:main perl5.12 5.12.4_3 exists in the ports tree
521:debug:main perl5.12 5.12.4_3  is the latest installed
522:debug:main perl5.12 5.12.4_3  is active
523:debug:main Merging existing variants '' into variants
524:debug:main new fully merged portvariants:
525:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5.12
526:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
527:debug:main adding the default universal variant
528:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
529:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
530:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
531:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
532:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
533:debug:main No need to upgrade! perl5.12 5.12.4_3 >= perl5.12 5.12.4_3
534:debug:main epoch: in tree: 0 installed: 0
535:debug:main gdbm 1.11_0 exists in the ports tree
536:debug:main gdbm 1.11_0  is the latest installed
537:debug:main gdbm 1.11_0  is active
538:debug:main Merging existing variants '' into variants
539:debug:main new fully merged portvariants:
540:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm
541:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
542:debug:main adding the default universal variant
543:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
544:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
545:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
546:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
547:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
548:debug:main No need to upgrade! gdbm 1.11_0 >= gdbm 1.11_0
549:debug:main epoch: in tree: 0 installed: 0
550:debug:main llvm_select 0.2_0 exists in the ports tree
551:debug:main llvm_select 0.2_0  is the latest installed
552:debug:main llvm_select 0.2_0  is active
553:debug:main Merging existing variants '' into variants
554:debug:main new fully merged portvariants:
555:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/llvm_select
556:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
557:debug:main universal_variant is false, so not adding the default universal variant
558:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
559:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
560:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
561:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
562:debug:main No need to upgrade! llvm_select 0.2_0 >= llvm_select 0.2_0
563:debug:main epoch: in tree: 0 installed: 0
564:debug:main cctools 845_0 exists in the ports tree
565:debug:main cctools 845_0 +llvm33 is the latest installed
566:debug:main cctools 845_0 +llvm33 is active
567:debug:main Merging existing variants '+llvm33' into variants
568:debug:main new fully merged portvariants: llvm33 +
569:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools
570:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
571:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
572:debug:main universal variant already exists, so not adding the default one
573:debug:main Executing variant llvm33 provides llvm33
574:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
575:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
576:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
577:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
578:debug:main No need to upgrade! cctools 845_0 >= cctools 845_0
579:debug:main epoch: in tree: 0 installed: 0
580:debug:main cctools-headers 845_0 exists in the ports tree
581:debug:main cctools-headers 845_0  is the latest installed
582:debug:main cctools-headers 845_0  is active
583:debug:main Merging existing variants '' into variants
584:debug:main new fully merged portvariants:
585:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools-headers
586:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
587:debug:main universal_variant is false, so not adding the default universal variant
588:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
589:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
590:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
591:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
592:debug:main No need to upgrade! cctools-headers 845_0 >= cctools-headers 845_0
593:debug:main epoch: in tree: 0 installed: 0
594:debug:main mpi_select 0.0_1 exists in the ports tree
595:debug:main mpi_select 0.0_1  is the latest installed
596:debug:main mpi_select 0.0_1  is active
597:debug:main Merging existing variants '' into variants
598:debug:main new fully merged portvariants:
599:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/mpi_select
600:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
601:debug:main universal_variant is false, so not adding the default universal variant
602:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
603:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
604:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
605:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
606:debug:main No need to upgrade! mpi_select 0.0_1 >= mpi_select 0.0_1
607:debug:main epoch: in tree: 0 installed: 0
608:debug:main hdf5-18 1.8.12_1 exists in the ports tree
609:debug:main hdf5-18 1.8.12_1 +cxx is the latest installed
610:debug:main hdf5-18 1.8.12_1 +cxx is active
611:debug:main Merging existing variants '+cxx' into variants
612:debug:main new fully merged portvariants: cxx +
613:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/hdf5-18
614:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
615:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
616:debug:main universal variant already exists, so not adding the default one
617:debug:main Executing variant cxx provides cxx
618:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
619:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
620:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
621:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
622:debug:main No need to upgrade! hdf5-18 1.8.12_1 >= hdf5-18 1.8.12_1
623:debug:main epoch: in tree: 0 installed: 0
624:debug:main py27-ffc 1.3.0_0 exists in the ports tree
625:debug:main py27-ffc 1.3.0_0  is the latest installed
626:debug:main py27-ffc 1.3.0_0  is active
627:debug:main Merging existing variants '' into variants
628:debug:main new fully merged portvariants:
629:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-ffc
630:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
631:debug:main Re-registering default for build.cmd
632:debug:main Re-registering default for destroot.cmd
633:debug:main Re-registering default for destroot.destdir
634:debug:main only one arch supported, so not adding the default universal variant
635:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
636:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
637:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
638:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
639:debug:main No need to upgrade! py27-ffc 1.3.0_0 >= py27-ffc 1.3.0_0
640:debug:main epoch: in tree: 0 installed: 0
641:debug:main py27-fiat 1.3.0_0 exists in the ports tree
642:debug:main py27-fiat 1.3.0_0  is the latest installed
643:debug:main py27-fiat 1.3.0_0  is active
644:debug:main Merging existing variants '' into variants
645:debug:main new fully merged portvariants:
646:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-fiat
647:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
648:debug:main Re-registering default for build.cmd
649:debug:main Re-registering default for destroot.cmd
650:debug:main Re-registering default for destroot.destdir
651:debug:main only one arch supported, so not adding the default universal variant
652:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
653:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
654:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
655:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
656:debug:main No need to upgrade! py27-fiat 1.3.0_0 >= py27-fiat 1.3.0_0
657:debug:main epoch: in tree: 0 installed: 0
658:debug:main py27-numpy 1.8.0_2 exists in the ports tree
659:debug:main py27-numpy 1.8.0_2  is the latest installed
660:debug:main py27-numpy 1.8.0_2  is active
661:debug:main Merging existing variants '' into variants
662:debug:main new fully merged portvariants:
663:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-numpy
664:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
665:debug:main Re-registering default for build.cmd
666:debug:main Re-registering default for destroot.cmd
667:debug:main Re-registering default for destroot.destdir
668:debug:main adding the default universal variant
669:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
670:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
671:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
672:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
673:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
674:debug:main No need to upgrade! py27-numpy 1.8.0_2 >= py27-numpy 1.8.0_2
675:debug:main epoch: in tree: 0 installed: 0
676:debug:main fftw-3 3.3.3_6 exists in the ports tree
677:debug:main fftw-3 3.3.3_6  is the latest installed
678:debug:main fftw-3 3.3.3_6  is active
679:debug:main Merging existing variants '' into variants
680:debug:main new fully merged portvariants:
681:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/fftw-3
682:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
683:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
684:debug:main compiler clang 500.2.79 not blacklisted because it doesn't match {clang <= 211.10.1}
685:debug:main universal variant already exists, so not adding the default one
686:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
687:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
688:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
689:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
690:debug:main No need to upgrade! fftw-3 3.3.3_6 >= fftw-3 3.3.3_6
691:debug:main epoch: in tree: 0 installed: 0
692:debug:main py27-nose 1.3.0_0 exists in the ports tree
693:debug:main py27-nose 1.3.0_0  is the latest installed
694:debug:main py27-nose 1.3.0_0  is active
695:debug:main Merging existing variants '' into variants
696:debug:main new fully merged portvariants:
697:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-nose
698:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
699:debug:main Re-registering default for build.cmd
700:debug:main Re-registering default for destroot.cmd
701:debug:main Re-registering default for destroot.destdir
702:debug:main only one arch supported, so not adding the default universal variant
703:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
704:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
705:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
706:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
707:debug:main No need to upgrade! py27-nose 1.3.0_0 >= py27-nose 1.3.0_0
708:debug:main epoch: in tree: 0 installed: 0
709:debug:main py27-setuptools 2.1_0 exists in the ports tree
710:debug:main py27-setuptools 2.1_0  is the latest installed
711:debug:main py27-setuptools 2.1_0  is active
712:debug:main Merging existing variants '' into variants
713:debug:main new fully merged portvariants:
714:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-setuptools
715:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
716:debug:main Re-registering default for build.cmd
717:debug:main Re-registering default for destroot.cmd
718:debug:main Re-registering default for destroot.destdir
719:debug:main only one arch supported, so not adding the default universal variant
720:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
721:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
722:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
723:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
724:debug:main No need to upgrade! py27-setuptools 2.1_0 >= py27-setuptools 2.1_0
725:debug:main epoch: in tree: 0 installed: 0
726:debug:main nosetests_select 0.1_0 exists in the ports tree
727:debug:main nosetests_select 0.1_0  is the latest installed
728:debug:main nosetests_select 0.1_0  is active
729:debug:main Merging existing variants '' into variants
730:debug:main new fully merged portvariants:
731:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/nosetests_select
732:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
733:debug:main universal_variant is false, so not adding the default universal variant
734:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
735:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
736:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
737:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
738:debug:main No need to upgrade! nosetests_select 0.1_0 >= nosetests_select 0.1_0
739:debug:main epoch: in tree: 0 installed: 0
740:debug:main py27-scientific 2.9.2_2 exists in the ports tree
741:debug:main py27-scientific 2.9.2_2  is the latest installed
742:debug:main py27-scientific 2.9.2_2  is active
743:debug:main Merging existing variants '' into variants
744:debug:main new fully merged portvariants:
745:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-scientific
746:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
747:debug:main Re-registering default for build.cmd
748:debug:main Re-registering default for destroot.cmd
749:debug:main Re-registering default for destroot.destdir
750:debug:main adding the default universal variant
751:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
752:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
753:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
754:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
755:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
756:debug:main No need to upgrade! py27-scientific 2.9.2_2 >= py27-scientific 2.9.2_2
757:debug:main epoch: in tree: 2 installed: 2
758:debug:main netcdf 4.3.0_2 exists in the ports tree
759:debug:main netcdf 4.3.0_2 +dap+netcdf4 is the latest installed
760:debug:main netcdf 4.3.0_2 +dap+netcdf4 is active
761:debug:main Merging existing variants '+dap+netcdf4' into variants
762:debug:main new fully merged portvariants: netcdf4 + dap +
763:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/netcdf
764:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
765:debug:main hdf5-18 is installed with the following variants: +cxx
766:debug:main   required: , forbidden:
767:debug:main   accepted
768:debug:main hdf5-18 is installed with the following variants: +cxx
769:debug:main   required: mpich, forbidden:
770:debug:main   rejected, because required variant mpich is missing
771:debug:main hdf5-18 is installed with the following variants: +cxx
772:debug:main   required: mpich_devel, forbidden:
773:debug:main   rejected, because required variant mpich_devel is missing
774:debug:main hdf5-18 is installed with the following variants: +cxx
775:debug:main   required: openmpi, forbidden:
776:debug:main   rejected, because required variant openmpi is missing
777:debug:main hdf5-18 is installed with the following variants: +cxx
778:debug:main   required: openmpi_devel, forbidden:
779:debug:main   rejected, because required variant openmpi_devel is missing
780:debug:main hdf5-18 is installed with the following variants: +cxx
781:debug:main   required: , forbidden:
782:debug:main   accepted
783:debug:main hdf5-18 is installed with the following variants: +cxx
784:debug:main   required: clang30, forbidden:
785:debug:main   rejected, because required variant clang30 is missing
786:debug:main hdf5-18 is installed with the following variants: +cxx
787:debug:main   required: clang31, forbidden:
788:debug:main   rejected, because required variant clang31 is missing
789:debug:main hdf5-18 is installed with the following variants: +cxx
790:debug:main   required: clang32, forbidden:
791:debug:main   rejected, because required variant clang32 is missing
792:debug:main hdf5-18 is installed with the following variants: +cxx
793:debug:main   required: clang33, forbidden:
794:debug:main   rejected, because required variant clang33 is missing
795:debug:main hdf5-18 is installed with the following variants: +cxx
796:debug:main   required: clang34, forbidden:
797:debug:main   rejected, because required variant clang34 is missing
798:debug:main hdf5-18 is installed with the following variants: +cxx
799:debug:main   required: clang35, forbidden:
800:debug:main   rejected, because required variant clang35 is missing
801:debug:main hdf5-18 is installed with the following variants: +cxx
802:debug:main   required: dragonegg30, forbidden:
803:debug:main   rejected, because required variant dragonegg30 is missing
804:debug:main hdf5-18 is installed with the following variants: +cxx
805:debug:main   required: dragonegg31, forbidden:
806:debug:main   rejected, because required variant dragonegg31 is missing
807:debug:main hdf5-18 is installed with the following variants: +cxx
808:debug:main   required: dragonegg32, forbidden:
809:debug:main   rejected, because required variant dragonegg32 is missing
810:debug:main hdf5-18 is installed with the following variants: +cxx
811:debug:main   required: dragonegg33, forbidden:
812:debug:main   rejected, because required variant dragonegg33 is missing
813:debug:main hdf5-18 is installed with the following variants: +cxx
814:debug:main   required: dragonegg34, forbidden:
815:debug:main   rejected, because required variant dragonegg34 is missing
816:debug:main hdf5-18 is installed with the following variants: +cxx
817:debug:main   required: gcc44, forbidden:
818:debug:main   rejected, because required variant gcc44 is missing
819:debug:main hdf5-18 is installed with the following variants: +cxx
820:debug:main   required: gcc45, forbidden:
821:debug:main   rejected, because required variant gcc45 is missing
822:debug:main hdf5-18 is installed with the following variants: +cxx
823:debug:main   required: gcc46, forbidden:
824:debug:main   rejected, because required variant gcc46 is missing
825:debug:main hdf5-18 is installed with the following variants: +cxx
826:debug:main   required: gcc47, forbidden:
827:debug:main   rejected, because required variant gcc47 is missing
828:debug:main hdf5-18 is installed with the following variants: +cxx
829:debug:main   required: gcc48, forbidden:
830:debug:main   rejected, because required variant gcc48 is missing
831:debug:main hdf5-18 is installed with the following variants: +cxx
832:debug:main   required: gcc49, forbidden:
833:debug:main   rejected, because required variant gcc49 is missing
834:debug:main hdf5-18 is installed with the following variants: +cxx
835:debug:main   required: llvm, forbidden:
836:debug:main   rejected, because required variant llvm is missing
837:debug:main adding the default universal variant
838:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
839:debug:main Executing variant netcdf4 provides netcdf4
840:debug:main Executing variant dap provides dap
841:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
842:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
843:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
844:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
845:debug:main No need to upgrade! netcdf 4.3.0_2 >= netcdf 4.3.0_2
846:debug:main epoch: in tree: 0 installed: 0
847:debug:main curl 7.34.0_1 exists in the ports tree
848:debug:main curl 7.34.0_1 +ssl is the latest installed
849:debug:main curl 7.34.0_1 +ssl is active
850:debug:main Merging existing variants '+ssl' into variants
851:debug:main new fully merged portvariants: ssl +
852:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl
853:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
854:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
855:debug:main universal variant already exists, so not adding the default one
856:debug:main Executing variant ssl provides ssl
857:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
858:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
859:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
860:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
861:debug:main No need to upgrade! curl 7.34.0_1 >= curl 7.34.0_1
862:debug:main epoch: in tree: 0 installed: 0
863:debug:main curl-ca-bundle 7.34.0_0 exists in the ports tree
864:debug:main curl-ca-bundle 7.34.0_0  is the latest installed
865:debug:main curl-ca-bundle 7.34.0_0  is active
866:debug:main Merging existing variants '' into variants
867:debug:main new fully merged portvariants:
868:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl
869:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
870:debug:main universal_variant is false, so not adding the default universal variant
871:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
872:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
873:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
874:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
875:debug:main No need to upgrade! curl-ca-bundle 7.34.0_0 >= curl-ca-bundle 7.34.0_0
876:debug:main epoch: in tree: 0 installed: 0
877:debug:main py27-ufl 1.3.0_0 exists in the ports tree
878:debug:main py27-ufl 1.3.0_0  is the latest installed
879:debug:main py27-ufl 1.3.0_0  is active
880:debug:main Merging existing variants '' into variants
881:debug:main new fully merged portvariants:
882:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-ufl
883:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
884:debug:main Re-registering default for build.cmd
885:debug:main Re-registering default for destroot.cmd
886:debug:main Re-registering default for destroot.destdir
887:debug:main only one arch supported, so not adding the default universal variant
888:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
889:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
890:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
891:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
892:debug:main No need to upgrade! py27-ufl 1.3.0_0 >= py27-ufl 1.3.0_0
893:debug:main epoch: in tree: 0 installed: 0
894:debug:main py27-ferari 1.0.0_0 exists in the ports tree
895:debug:main py27-ferari 1.0.0_0  is the latest installed
896:debug:main py27-ferari 1.0.0_0  is active
897:debug:main Merging existing variants '' into variants
898:debug:main new fully merged portvariants:
899:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-ferari
900:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
901:debug:main Re-registering default for build.cmd
902:debug:main Re-registering default for destroot.cmd
903:debug:main Re-registering default for destroot.destdir
904:debug:main only one arch supported, so not adding the default universal variant
905:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
906:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
907:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
908:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
909:debug:main No need to upgrade! py27-ferari 1.0.0_0 >= py27-ferari 1.0.0_0
910:debug:main epoch: in tree: 0 installed: 0
911:debug:main swig-python 2.0.11_0 exists in the ports tree
912:debug:main swig-python 2.0.11_0  is the latest installed
913:debug:main swig-python 2.0.11_0  is active
914:debug:main Merging existing variants '' into variants
915:debug:main new fully merged portvariants:
916:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig
917:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
918:debug:main only one arch supported, so not adding the default universal variant
919:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
920:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
921:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
922:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
923:debug:main No need to upgrade! swig-python 2.0.11_0 >= swig-python 2.0.11_0
924:debug:main epoch: in tree: 0 installed: 0
925:debug:main swig 2.0.11_0 exists in the ports tree
926:debug:main swig 2.0.11_0  is the latest installed
927:debug:main swig 2.0.11_0  is active
928:debug:main Merging existing variants '' into variants
929:debug:main new fully merged portvariants:
930:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig
931:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
932:debug:main adding the default universal variant
933:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
934:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
935:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
936:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
937:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
938:debug:main No need to upgrade! swig 2.0.11_0 >= swig 2.0.11_0
939:debug:main epoch: in tree: 0 installed: 0
940:debug:main pcre 8.33_1 exists in the ports tree
941:debug:main pcre 8.33_1  is the latest installed
942:debug:main pcre 8.33_1  is active
943:debug:main Merging existing variants '' into variants
944:debug:main new fully merged portvariants:
945:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/pcre
946:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
947:debug:main adding the default universal variant
948:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
949:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
950:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
951:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
952:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
953:debug:main No need to upgrade! pcre 8.33_1 >= pcre 8.33_1
954:debug:main epoch: in tree: 0 installed: 0
955:debug:main py27-instant 1.3.0_0 exists in the ports tree
956:debug:main py27-instant 1.3.0_0  is the latest installed
957:debug:main py27-instant 1.3.0_0  is active
958:debug:main Merging existing variants '' into variants
959:debug:main new fully merged portvariants:
960:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-instant
961:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
962:debug:main Re-registering default for build.cmd
963:debug:main Re-registering default for destroot.cmd
964:debug:main Re-registering default for destroot.destdir
965:debug:main only one arch supported, so not adding the default universal variant
966:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
967:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
968:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
969:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
970:debug:main No need to upgrade! py27-instant 1.3.0_0 >= py27-instant 1.3.0_0
971:debug:main epoch: in tree: 0 installed: 0
972:debug:main ufc 2.3.0_0 exists in the ports tree
973:debug:main ufc 2.3.0_0  is the latest installed
974:debug:main ufc 2.3.0_0  is active
975:debug:main Merging existing variants '' into variants
976:debug:main new fully merged portvariants:
977:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/ufc
978:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
979:debug:main adding the default universal variant
980:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
981:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
982:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
983:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
984:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
985:debug:main No need to upgrade! ufc 2.3.0_0 >= ufc 2.3.0_0
986:debug:main epoch: in tree: 0 installed: 0
987:debug:main cgal 4.3_0 exists in the ports tree
988:debug:main cgal 4.3_0  is the latest installed
989:debug:main cgal 4.3_0  is active
990:debug:main Merging existing variants '' into variants
991:debug:main new fully merged portvariants:
992:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/gis/cgal
993:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
994:debug:main adding the default universal variant
995:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
996:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
997:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
998:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
999:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1000:debug:main No need to upgrade! cgal 4.3_0 >= cgal 4.3_0
1001:debug:main epoch: in tree: 0 installed: 0
1002:debug:main eigen3 3.2.0_0 exists in the ports tree
1003:debug:main eigen3 3.2.0_0 +cmake is the latest installed
1004:debug:main eigen3 3.2.0_0 +cmake is active
1005:debug:main Merging existing variants '+cmake' into variants
1006:debug:main new fully merged portvariants: cmake +
1007:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/eigen3
1008:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1009:debug:main only one arch supported, so not adding the default universal variant
1010:debug:main Executing variant cmake provides cmake
1011:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1012:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1013:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1014:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1015:debug:main No need to upgrade! eigen3 3.2.0_0 >= eigen3 3.2.0_0
1016:debug:main epoch: in tree: 0 installed: 0
1017:debug:main parmetis 4.0.3_3 exists in the ports tree
1018:debug:main parmetis 4.0.3_3 +mpich is the latest installed
1019:debug:main parmetis 4.0.3_3 +mpich is active
1020:debug:main Merging existing variants '+mpich' into variants
1021:debug:main new fully merged portvariants: mpich +
1022:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/parmetis
1023:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1024:debug:main universal_variant is false, so not adding the default universal variant
1025:debug:main Executing variant mpich provides mpich
1026:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1027:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1028:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1029:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1030:debug:main No need to upgrade! parmetis 4.0.3_3 >= parmetis 4.0.3_3
1031:debug:main epoch: in tree: 0 installed: 0
1032:debug:main metis 5.1.0_3 exists in the ports tree
1033:debug:main metis 5.1.0_3  is the latest installed
1034:debug:main metis 5.1.0_3  is active
1035:debug:main Merging existing variants '' into variants
1036:debug:main new fully merged portvariants:
1037:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/metis
1038:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1039:debug:main adding the default universal variant
1040:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1041:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1042:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1043:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1044:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1045:debug:main No need to upgrade! metis 5.1.0_3 >= metis 5.1.0_3
1046:debug:main epoch: in tree: 20120107 installed: 20120107
1047:debug:main SuiteSparse 4.2.1_2 exists in the ports tree
1048:debug:main SuiteSparse 4.2.1_2  is the latest installed
1049:debug:main SuiteSparse 4.2.1_2  is active
1050:debug:main Merging existing variants '' into variants
1051:debug:main new fully merged portvariants:
1052:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/SuiteSparse
1053:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1054:debug:main adding the default universal variant
1055:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1056:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1057:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1058:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1059:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1060:debug:main No need to upgrade! SuiteSparse 4.2.1_2 >= SuiteSparse 4.2.1_2
1061:debug:main epoch: in tree: 0 installed: 0
1062:debug:main petsc 3.4.3_1 exists in the ports tree
1063:debug:main petsc 3.4.3_1 +accelerate+mpich is the latest installed
1064:debug:main petsc 3.4.3_1 +accelerate+mpich is active
1065:debug:main Merging existing variants '+accelerate+mpich' into variants
1066:debug:main new fully merged portvariants: mpich + accelerate +
1067:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/petsc
1068:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1069:debug:main universal_variant is false, so not adding the default universal variant
1070:debug:main Executing variant mpich provides mpich
1071:debug:main Executing variant accelerate provides accelerate
1072:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1073:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1074:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1075:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1076:debug:main No need to upgrade! petsc 3.4.3_1 >= petsc 3.4.3_1
1077:debug:main epoch: in tree: 0 installed: 0
1078:debug:main slepc 3.4.3_0 exists in the ports tree
1079:debug:main slepc 3.4.3_0  is the latest installed
1080:debug:main slepc 3.4.3_0  is active
1081:debug:main Merging existing variants '' into variants
1082:debug:main new fully merged portvariants:
1083:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/slepc
1084:debug:main OS darwin/13.0.0 (Mac OS X 10.9) arch i386
1085:debug:main petsc is installed with the following variants: +accelerate+mpich
1086:debug:main   required: , forbidden:
1087:debug:main   accepted
1088:debug:main petsc is installed with the following variants: +accelerate+mpich
1089:debug:main   required: mpich, forbidden:
1090:debug:main   accepted
1091:debug:main petsc is installed with the following variants: +accelerate+mpich
1092:debug:main   required: , forbidden:
1093:debug:main   accepted
1094:debug:main petsc is installed with the following variants: +accelerate+mpich
1095:debug:main   required: clang30, forbidden:
1096:debug:main   rejected, because required variant clang30 is missing
1097:debug:main petsc is installed with the following variants: +accelerate+mpich
1098:debug:main   required: clang31, forbidden:
1099:debug:main   rejected, because required variant clang31 is missing
1100:debug:main petsc is installed with the following variants: +accelerate+mpich
1101:debug:main   required: clang32, forbidden:
1102:debug:main   rejected, because required variant clang32 is missing
1103:debug:main petsc is installed with the following variants: +accelerate+mpich
1104:debug:main   required: clang33, forbidden:
1105:debug:main   rejected, because required variant clang33 is missing
1106:debug:main petsc is installed with the following variants: +accelerate+mpich
1107:debug:main   required: clang34, forbidden:
1108:debug:main   rejected, because required variant clang34 is missing
1109:debug:main petsc is installed with the following variants: +accelerate+mpich
1110:debug:main   required: clang35, forbidden:
1111:debug:main   rejected, because required variant clang35 is missing
1112:debug:main petsc is installed with the following variants: +accelerate+mpich
1113:debug:main   required: dragonegg30, forbidden:
1114:debug:main   rejected, because required variant dragonegg30 is missing
1115:debug:main petsc is installed with the following variants: +accelerate+mpich
1116:debug:main   required: dragonegg31, forbidden:
1117:debug:main   rejected, because required variant dragonegg31 is missing
1118:debug:main petsc is installed with the following variants: +accelerate+mpich
1119:debug:main   required: dragonegg32, forbidden:
1120:debug:main   rejected, because required variant dragonegg32 is missing
1121:debug:main petsc is installed with the following variants: +accelerate+mpich
1122:debug:main   required: dragonegg33, forbidden:
1123:debug:main   rejected, because required variant dragonegg33 is missing
1124:debug:main petsc is installed with the following variants: +accelerate+mpich
1125:debug:main   required: dragonegg34, forbidden:
1126:debug:main   rejected, because required variant dragonegg34 is missing
1127:debug:main petsc is installed with the following variants: +accelerate+mpich
1128:debug:main   required: gcc44, forbidden:
1129:debug:main   rejected, because required variant gcc44 is missing
1130:debug:main petsc is installed with the following variants: +accelerate+mpich
1131:debug:main   required: gcc45, forbidden:
1132:debug:main   rejected, because required variant gcc45 is missing
1133:debug:main petsc is installed with the following variants: +accelerate+mpich
1134:debug:main   required: gcc46, forbidden:
1135:debug:main   rejected, because required variant gcc46 is missing
1136:debug:main petsc is installed with the following variants: +accelerate+mpich
1137:debug:main   required: gcc47, forbidden:
1138:debug:main   rejected, because required variant gcc47 is missing
1139:debug:main petsc is installed with the following variants: +accelerate+mpich
1140:debug:main   required: gcc48, forbidden:
1141:debug:main   rejected, because required variant gcc48 is missing
1142:debug:main petsc is installed with the following variants: +accelerate+mpich
1143:debug:main   required: gcc49, forbidden:
1144:debug:main   rejected, because required variant gcc49 is missing
1145:debug:main petsc is installed with the following variants: +accelerate+mpich
1146:debug:main   required: llvm, forbidden:
1147:debug:main   rejected, because required variant llvm is missing
1148:debug:main universal_variant is false, so not adding the default universal variant
1149:debug:main Executing variant mpich provides mpich
1150:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1151:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1152:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1153:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1154:debug:main Skipping upgrade since slepc 3.4.3_0 >= slepc 3.4.3_0, even though installed variants "" do not match "+mpich".
1155:msg:main --->  Computing dependencies for dolfin:info:main .:debug:main dolfin has no conflicts
1156:debug:main Searching for dependency: cmake
1157:debug:main Found Dependency: receipt exists for cmake
1158:debug:main Searching for dependency: py27-ply
1159:debug:main Found Dependency: receipt exists for py27-ply
1160:debug:main Searching for dependency: armadillo
1161:debug:main Found Dependency: receipt exists for armadillo
1162:debug:main Searching for dependency: py27-ffc
1163:debug:main Found Dependency: receipt exists for py27-ffc
1164:debug:main Searching for dependency: mpich-default
1165:debug:main Found Dependency: receipt exists for mpich-default
1166:debug:main Searching for dependency: cgal
1167:debug:main Found Dependency: receipt exists for cgal
1168:debug:main Searching for dependency: parmetis
1169:debug:main Found Dependency: receipt exists for parmetis
1170:debug:main Searching for dependency: suitesparse
1171:debug:main Found Dependency: receipt exists for suitesparse
1172:debug:main Searching for dependency: petsc
1173:debug:main Found Dependency: receipt exists for petsc
1174:debug:main Searching for dependency: slepc
1175:debug:main Found Dependency: receipt exists for slepc
1176:msg:main
1177:debug:main Executing org.macports.main (dolfin)
1178:debug:main changing euid/egid - current euid: 0 - current egid: 0
1179:debug:main egid changed to: 501
1180:debug:main euid changed to: 502
1181:debug:archivefetch archivefetch phase started at Wed Jan 29 08:59:49 MST 2014
1182:msg:archivefetch --->  Fetching archive for dolfin
1183:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
1184:debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: py27-ply armadillo py27-ffc mpich-default cgal parmetis suitesparse petsc slepc
1185:debug:archivefetch Executing org.macports.archivefetch (dolfin)
1186:debug:archivefetch euid/egid changed to: 0/0
1187:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
1188:debug:archivefetch euid/egid changed to: 502/501
1189:info:archivefetch --->  dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
1190:msg:archivefetch --->  Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://packages.macports.org/dolfin
1191:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1192:msg:archivefetch --->  Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/dolfin
1193:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1194:msg:archivefetch --->  Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/dolfin
1195:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1196:debug:archivefetch Privilege de-escalation not attempted as not running as root.
1197:debug:fetch fetch phase started at Wed Jan 29 08:59:57 MST 2014
1198:notice:fetch --->  Fetching distfiles for dolfin
1199:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
1200:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
1201:debug:fetch Executing proc-pre-org.macports.fetch-fetch-2
1202:debug:fetch Executing org.macports.fetch (dolfin)
1203:debug:fetch Privilege de-escalation not attempted as not running as root.
1204:debug:checksum checksum phase started at Wed Jan 29 08:59:57 MST 2014
1205:notice:checksum --->  Verifying checksums for dolfin
1206:debug:checksum Executing org.macports.checksum (dolfin)
1207:info:checksum --->  Checksumming dolfin-1.3.0.tar.gz
1208:debug:checksum Correct (rmd160) checksum for dolfin-1.3.0.tar.gz
1209:debug:checksum Correct (sha256) checksum for dolfin-1.3.0.tar.gz
1210:debug:checksum Privilege de-escalation not attempted as not running as root.
1211:debug:extract extract phase started at Wed Jan 29 08:59:57 MST 2014
1212:notice:extract --->  Extracting dolfin
1213:debug:extract Executing org.macports.extract (dolfin)
1214:info:extract --->  Extracting dolfin-1.3.0.tar.gz
1215:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/dolfin/dolfin-1.3.0.tar.gz'
1216:debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9'
1217:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/dolfin/dolfin-1.3.0.tar.gz' | /usr/bin/tar -xf -'
1218:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/dolfin/dolfin-1.3.0.tar.gz' | /usr/bin/tar -xf -
1219:debug:extract euid/egid changed to: 0/0
1220:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work to macports
1221:debug:extract euid/egid changed to: 502/501
1222:debug:extract Executing proc-post-org.macports.extract-extract-0
1223:debug:extract Executing proc-post-org.macports.extract-extract-1
1224:debug:extract delete: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/cmake/post-install/
1225:debug:extract Executing reinplace: /usr/bin/sed s,add_subdirectory(cmake/post-install),, < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/CMakeLists.txt >@ file10
1226:debug:extract euid/egid changed to: 0/0
1227:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/CMakeLists.txt to macports
1228:debug:extract euid/egid changed to: 502/501
1229:debug:extract euid/egid changed to: 0/0
1230:debug:extract setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/CMakeLists.txt
1231:debug:extract euid/egid changed to: 502/501
1232:debug:extract Privilege de-escalation not attempted as not running as root.
1233:debug:patch patch phase started at Wed Jan 29 08:59:58 MST 2014
1234:debug:patch Executing org.macports.patch (dolfin)
1235:debug:patch Privilege de-escalation not attempted as not running as root.
1236:debug:configure configure phase started at Wed Jan 29 08:59:58 MST 2014
1237:notice:configure --->  Configuring dolfin
1238:debug:configure Using compiler 'Xcode Clang'
1239:debug:configure Executing proc-pre-org.macports.configure-configure-0
1240:debug:configure Executing proc-pre-org.macports.configure-configure-1
1241:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: py27-ply armadillo py27-ffc mpich-default cgal parmetis suitesparse petsc slepc cmake
1242:debug:configure Executing proc-pre-org.macports.configure-configure-2
1243:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1244:debug:configure   required: , forbidden:
1245:debug:configure   accepted
1246:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1247:debug:configure   required: mpich, forbidden:
1248:debug:configure   accepted
1249:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1250:debug:configure   required: , forbidden:
1251:debug:configure   accepted
1252:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1253:debug:configure   required: clang30, forbidden:
1254:debug:configure   rejected, because required variant clang30 is missing
1255:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1256:debug:configure   required: clang31, forbidden:
1257:debug:configure   rejected, because required variant clang31 is missing
1258:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1259:debug:configure   required: clang32, forbidden:
1260:debug:configure   rejected, because required variant clang32 is missing
1261:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1262:debug:configure   required: clang33, forbidden:
1263:debug:configure   rejected, because required variant clang33 is missing
1264:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1265:debug:configure   required: clang34, forbidden:
1266:debug:configure   rejected, because required variant clang34 is missing
1267:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1268:debug:configure   required: clang35, forbidden:
1269:debug:configure   rejected, because required variant clang35 is missing
1270:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1271:debug:configure   required: dragonegg30, forbidden:
1272:debug:configure   rejected, because required variant dragonegg30 is missing
1273:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1274:debug:configure   required: dragonegg31, forbidden:
1275:debug:configure   rejected, because required variant dragonegg31 is missing
1276:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1277:debug:configure   required: dragonegg32, forbidden:
1278:debug:configure   rejected, because required variant dragonegg32 is missing
1279:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1280:debug:configure   required: dragonegg33, forbidden:
1281:debug:configure   rejected, because required variant dragonegg33 is missing
1282:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1283:debug:configure   required: dragonegg34, forbidden:
1284:debug:configure   rejected, because required variant dragonegg34 is missing
1285:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1286:debug:configure   required: gcc44, forbidden:
1287:debug:configure   rejected, because required variant gcc44 is missing
1288:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1289:debug:configure   required: gcc45, forbidden:
1290:debug:configure   rejected, because required variant gcc45 is missing
1291:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1292:debug:configure   required: gcc46, forbidden:
1293:debug:configure   rejected, because required variant gcc46 is missing
1294:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1295:debug:configure   required: gcc47, forbidden:
1296:debug:configure   rejected, because required variant gcc47 is missing
1297:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1298:debug:configure   required: gcc48, forbidden:
1299:debug:configure   rejected, because required variant gcc48 is missing
1300:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1301:debug:configure   required: gcc49, forbidden:
1302:debug:configure   rejected, because required variant gcc49 is missing
1303:debug:configure boost is installed with the following variants: +mpich+no_single+no_static+python27
1304:debug:configure   required: llvm, forbidden:
1305:debug:configure   rejected, because required variant llvm is missing
1306:debug:configure Executing org.macports.configure (dolfin)
1307:debug:configure Environment: CPATH='/opt/local/include' CXXFLAGS='-pipe -Os -I/opt/local/include -arch x86_64' CFLAGS='-pipe -Os -I/opt/local/include -arch x86_64' CPPFLAGS='-I/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.9' CXX='mpicxx-mpich-mp' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -Os -m64' PETSC_ARCH='' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64' FCFLAGS='-pipe -Os -m64' OBJC='/usr/bin/clang' OBJCXX='/usr/bin/clang++' INSTALL='/usr/bin/install -c' F90='mpif90-mpich-mp' FC='mpif90-mpich-mp' FFLAGS='-pipe -Os -m64' OBJCXXFLAGS='-pipe -Os -arch x86_64' OBJCFLAGS='-pipe -Os -arch x86_64' F77='mpif77-mpich-mp' CC_PRINT_OPTIONS='YES' PETSC_DIR='/opt/local/lib/petsc' CC='mpicc-mpich-mp'
1308:debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/build" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -DPYTHON_EXECUTABLE:FILEPATH=/opt/local/bin/python2.7 -DPYTHON_INCLUDE_DIR:PATH=/opt/local/Library/Frameworks/Python.framework/Headers -DPYTHON_LIBRARY:FILEPATH=/opt/local/lib/libpython2.7.dylib -DDOLFIN_INSTALL_PYTHON_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_INSTALL_PYTHON_PURE_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_SKIP_BUILD_TESTS=ON -DDOLFIN_ENABLE_DOCS:BOOL=OFF -DDOLFIN_ENABLE_HDF5:BOOL=OFF -DDOLFIN_ENABLE_MPI:BOOL=ON -DDOLFIN_ENABLE_PETSC4PY:BOOL=OFF -DDOLFIN_ENABLE_SCOTCH:BOOL=OFF -DDOLFIN_ENABLE_SPHINX:BOOL=OFF -DDOLFIN_ENABLE_TRILINOS:BOOL=OFF -DDOLFIN_ENABLE_CGAL:BOOL=ON -DDOLFIN_ENABLE_PARMETIS:BOOL=ON -DDOLFIN_ENABLE_CHOLMOD:BOOL=ON -DDOLFIN_ENABLE_UMFPACK:BOOL=ON -DDOLFIN_ENABLE_PETSC:BOOL=ON -DDOLFIN_ENABLE_SLEPC:BOOL=ON -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_SYSROOT=/ -DCMAKE_OSX_DEPLOYMENT_TARGET="" -DCMAKE_C_COMPILER=mpicc-mpich-mp -DCMAKE_CXX_COMPILER=mpicxx-mpich-mp -DCMAKE_Fortran_COMPILER=mpif90-mpich-mp -DMPI_C_COMPILER=mpicc-mpich-mp -DMPI_CXX_COMPILER=mpicxx-mpich-mp -DMPI_Fortran_COMPILER=mpif90-mpich-mp ..'
1309:debug:configure Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/build" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -DPYTHON_EXECUTABLE:FILEPATH=/opt/local/bin/python2.7 -DPYTHON_INCLUDE_DIR:PATH=/opt/local/Library/Frameworks/Python.framework/Headers -DPYTHON_LIBRARY:FILEPATH=/opt/local/lib/libpython2.7.dylib -DDOLFIN_INSTALL_PYTHON_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_INSTALL_PYTHON_PURE_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_SKIP_BUILD_TESTS=ON -DDOLFIN_ENABLE_DOCS:BOOL=OFF -DDOLFIN_ENABLE_HDF5:BOOL=OFF -DDOLFIN_ENABLE_MPI:BOOL=ON -DDOLFIN_ENABLE_PETSC4PY:BOOL=OFF -DDOLFIN_ENABLE_SCOTCH:BOOL=OFF -DDOLFIN_ENABLE_SPHINX:BOOL=OFF -DDOLFIN_ENABLE_TRILINOS:BOOL=OFF -DDOLFIN_ENABLE_CGAL:BOOL=ON -DDOLFIN_ENABLE_PARMETIS:BOOL=ON -DDOLFIN_ENABLE_CHOLMOD:BOOL=ON -DDOLFIN_ENABLE_UMFPACK:BOOL=ON -DDOLFIN_ENABLE_PETSC:BOOL=ON -DDOLFIN_ENABLE_SLEPC:BOOL=ON -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_SYSROOT=/ -DCMAKE_OSX_DEPLOYMENT_TARGET="" -DCMAKE_C_COMPILER=mpicc-mpich-mp -DCMAKE_CXX_COMPILER=mpicxx-mpich-mp -DCMAKE_Fortran_COMPILER=mpif90-mpich-mp -DMPI_C_COMPILER=mpicc-mpich-mp -DMPI_CXX_COMPILER=mpicxx-mpich-mp -DMPI_Fortran_COMPILER=mpif90-mpich-mp ..
1310:info:configure -- The C compiler identification is Clang 5.0.0
1311:info:configure -- The CXX compiler identification is Clang 5.0.0
1312:info:configure -- Check for working C compiler: /opt/local/bin/mpicc-mpich-mp
1313:info:configure -- Check for working C compiler: /opt/local/bin/mpicc-mpich-mp -- works
1314:info:configure -- Detecting C compiler ABI info
1315:info:configure -- Detecting C compiler ABI info - done
1316:info:configure -- Check for working CXX compiler: /opt/local/bin/mpicxx-mpich-mp
1317:info:configure -- Check for working CXX compiler: /opt/local/bin/mpicxx-mpich-mp -- works
1318:info:configure -- Detecting CXX compiler ABI info
1319:info:configure -- Detecting CXX compiler ABI info - done
1320:info:configure fatal: Not a git repository (or any of the parent directories): .git
1321:info:configure -- Performing Test HAVE_PIPE
1322:info:configure -- Performing Test HAVE_PIPE - Success
1323:info:configure -- Performing Test HAVE_PEDANTIC
1324:info:configure -- Performing Test HAVE_PEDANTIC - Success
1325:info:configure -- Performing Test HAVE_STD
1326:info:configure -- Performing Test HAVE_STD - Success
1327:info:configure -- Performing Test HAVE_DEBUG
1328:info:configure -- Performing Test HAVE_DEBUG - Success
1329:info:configure -- Performing Test HAVE_O2_OPTIMISATION
1330:info:configure -- Performing Test HAVE_O2_OPTIMISATION - Success
1331:info:configure -- The Fortran compiler identification is GNU
1332:info:configure -- Check for working Fortran compiler: /opt/local/bin/mpif90-mpich-mp
1333:info:configure -- Check for working Fortran compiler: /opt/local/bin/mpif90-mpich-mp  -- works
1334:info:configure -- Detecting Fortran compiler ABI info
1335:info:configure -- Detecting Fortran compiler ABI info - done
1336:info:configure -- Checking whether /opt/local/bin/mpif90-mpich-mp supports Fortran 90
1337:info:configure -- Checking whether /opt/local/bin/mpif90-mpich-mp supports Fortran 90 -- yes
1338:info:configure -- Found MPI_C: /opt/local/lib/mpich-mp/libpmpich.dylib;/opt/local/lib/mpich-mp/libmpich.dylib;/opt/local/lib/mpich-mp/libopa.dylib;/opt/local/lib/mpich-mp/libmpl.dylib;/usr/lib/libpthread.dylib 
1339:info:configure -- Found MPI_CXX: /opt/local/lib/mpich-mp/libmpichcxx.dylib;/opt/local/lib/mpich-mp/libpmpich.dylib;/opt/local/lib/mpich-mp/libmpich.dylib;/opt/local/lib/mpich-mp/libopa.dylib;/opt/local/lib/mpich-mp/libmpl.dylib;/usr/lib/libpthread.dylib 
1340:info:configure -- Found MPI_Fortran: /opt/local/lib/mpich-mp/libmpichf90.dylib;/opt/local/lib/mpich-mp/libpmpich.dylib;/opt/local/lib/mpich-mp/libmpich.dylib;/opt/local/lib/mpich-mp/libopa.dylib;/opt/local/lib/mpich-mp/libmpl.dylib;/usr/lib/libpthread.dylib 
1341:info:configure -- Try OpenMP C flag = [-fopenmp]
1342:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1343:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1344:info:configure -- Try OpenMP C flag = [/openmp]
1345:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1346:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1347:info:configure -- Try OpenMP C flag = [-Qopenmp]
1348:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1349:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1350:info:configure -- Try OpenMP C flag = [-openmp]
1351:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1352:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1353:info:configure -- Try OpenMP C flag = [ ]
1354:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1355:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1356:info:configure -- Try OpenMP C flag = [-xopenmp]
1357:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1358:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1359:info:configure -- Try OpenMP C flag = [+Oopenmp]
1360:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1361:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1362:info:configure -- Try OpenMP C flag = [-qsmp]
1363:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1364:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1365:info:configure -- Try OpenMP C flag = [-mp]
1366:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1367:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1368:info:configure -- Try OpenMP CXX flag = [-fopenmp]
1369:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1370:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1371:info:configure -- Try OpenMP CXX flag = [/openmp]
1372:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1373:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1374:info:configure -- Try OpenMP CXX flag = [-Qopenmp]
1375:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1376:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1377:info:configure -- Try OpenMP CXX flag = [-openmp]
1378:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1379:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1380:info:configure -- Try OpenMP CXX flag = [ ]
1381:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1382:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1383:info:configure -- Try OpenMP CXX flag = [-xopenmp]
1384:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1385:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1386:info:configure -- Try OpenMP CXX flag = [+Oopenmp]
1387:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1388:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1389:info:configure -- Try OpenMP CXX flag = [-qsmp]
1390:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1391:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1392:info:configure -- Try OpenMP CXX flag = [-mp]
1393:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1394:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1395:info:configure -- Could NOT find OpenMP (missing:  OpenMP_C_FLAGS OpenMP_CXX_FLAGS)
1396:info:configure -- Try OpenMP C flag = [-fopenmp]
1397:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1398:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1399:info:configure -- Try OpenMP C flag = [/openmp]
1400:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1401:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1402:info:configure -- Try OpenMP C flag = [-Qopenmp]
1403:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1404:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1405:info:configure -- Try OpenMP C flag = [-openmp]
1406:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1407:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1408:info:configure -- Try OpenMP C flag = [ ]
1409:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1410:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1411:info:configure -- Try OpenMP C flag = [-xopenmp]
1412:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1413:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1414:info:configure -- Try OpenMP C flag = [+Oopenmp]
1415:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1416:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1417:info:configure -- Try OpenMP C flag = [-qsmp]
1418:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1419:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1420:info:configure -- Try OpenMP C flag = [-mp]
1421:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1422:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1423:info:configure -- Try OpenMP CXX flag = [-fopenmp]
1424:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1425:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1426:info:configure -- Try OpenMP CXX flag = [/openmp]
1427:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1428:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1429:info:configure -- Try OpenMP CXX flag = [-Qopenmp]
1430:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1431:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1432:info:configure -- Try OpenMP CXX flag = [-openmp]
1433:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1434:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1435:info:configure -- Try OpenMP CXX flag = [ ]
1436:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1437:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1438:info:configure -- Try OpenMP CXX flag = [-xopenmp]
1439:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1440:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1441:info:configure -- Try OpenMP CXX flag = [+Oopenmp]
1442:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1443:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1444:info:configure -- Try OpenMP CXX flag = [-qsmp]
1445:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1446:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1447:info:configure -- Try OpenMP CXX flag = [-mp]
1448:info:configure -- Performing Test OpenMP_FLAG_DETECTED
1449:info:configure -- Performing Test OpenMP_FLAG_DETECTED - Failed
1450:info:configure -- Could NOT find OpenMP (missing:  OpenMP_C_FLAGS OpenMP_CXX_FLAGS)
1451:info:configure -- Performing Test OPENMP_UINT_TEST_RUNS
1452:info:configure -- Performing Test OPENMP_UINT_TEST_RUNS - Failed
1453:info:configure -- Boost version: 1.55.0
1454:info:configure -- Found the following Boost libraries:
1455:info:configure --   filesystem
1456:info:configure --   program_options
1457:info:configure --   system
1458:info:configure --   thread
1459:info:configure --   iostreams
1460:info:configure --   mpi
1461:info:configure --   serialization
1462:info:configure --   timer
1463:info:configure --   chrono
1464:info:configure -- UFC version: 2.3.0
1465:info:configure -- Found Eigen3: /opt/local/include/eigen3 (Required is at least version "3.0.0")
1466:info:configure -- Found LibXml2: /opt/local/lib/libxml2.dylib (found version "2.9.1")
1467:info:configure -- Found PythonInterp: /opt/local/bin/python2.7 (found suitable version "2.7.6", minimum required is "2")
1468:info:configure -- NumPy header version 1.8.0 found
1469:info:configure -- Found SWIG: /opt/local/bin/swig (found version "2.0.11")
1470:info:configure -- Checking for package 'PETSc'
1471:info:configure -- PETSC_DIR is /opt/local/lib/petsc
1472:info:configure -- PETSC_ARCH is empty
1473:info:configure -- Found petscconf.h
1474:info:configure -- Looking for XOpenDisplay in /opt/local/lib/libX11.dylib;/opt/local/lib/libXext.dylib
1475:info:configure -- Looking for XOpenDisplay in /opt/local/lib/libX11.dylib;/opt/local/lib/libXext.dylib - found
1476:info:configure -- Looking for gethostbyname
1477:info:configure -- Looking for gethostbyname - found
1478:info:configure -- Looking for connect
1479:info:configure -- Looking for connect - found
1480:info:configure -- Looking for remove
1481:info:configure -- Looking for remove - found
1482:info:configure -- Looking for shmat
1483:info:configure -- Looking for shmat - found
1484:info:configure -- Looking for IceConnectionNumber in ICE
1485:info:configure -- Looking for IceConnectionNumber in ICE - found
1486:info:configure -- Found X11: /opt/local/lib/libX11.dylib
1487:info:configure -- Found PETSc: /opt/local/lib/petsc/lib/libpetsc.dylib (Required is at least version "3.2")
1488:info:configure -- Checking for package 'SLEPc'
1489:info:configure -- SLEPC_DIR is /opt/local/lib/petsc
1490:info:configure -- Found SLEPc: /opt/local/lib/petsc/lib/libslepc.dylib (Required is at least version "3.2")
1491:info:configure -- Checking for package 'TAO'
1492:info:configure -- TAO_DIR is TAO_DIR-NOTFOUND
1493:info:configure -- TAO could not be found. Be sure to set TAO_DIR, PETSC_DIR, and PETSC_ARCH. (missing:  TAO_LIBRARIES TAO_DIR TAO_INCLUDE_DIRS)
1494:info:configure -- Found ParMETIS: /opt/local/lib/libparmetis.dylib;/opt/local/lib/libmetis.dylib (Required is at least version "4.0.2")
1495:info:configure -- Checking for package 'AMD'
1496:info:configure -- Looking for Fortran dgemm
1497:info:configure -- Looking for Fortran dgemm - found
1498:info:configure -- Looking for include file pthread.h
1499:info:configure -- Looking for include file pthread.h - found
1500:info:configure -- Looking for pthread_create
1501:info:configure -- Looking for pthread_create - found
1502:info:configure -- Found Threads: TRUE 
1503:info:configure -- Checking for package 'UMFPACK'
1504:info:configure -- Checking for package 'AMD'
1505:info:configure -- Checking for package 'CHOLMOD'
1506:info:configure -- Checking for package 'AMD'
1507:info:configure -- A library with BLAS API found.
1508:info:configure -- Looking for Fortran cheev
1509:info:configure -- Looking for Fortran cheev - found
1510:info:configure -- Checking for package 'CHOLMOD'
1511:info:configure -- Checking for package 'AMD'
1512:info:configure -- A library with BLAS API found.
1513:info:configure -- A library with BLAS API found.
1514:info:configure -- PaStiX could not be found. Be sure to set PASTIX_DIR. (missing:  PASTIX_INCLUDE_DIRS PASTIX_VERSION PASTIX_VERSION_OK)
1515:info:configure -- Checking for package 'CGAL'
1516:info:configure -- Found CGAL: /opt/local/lib/libCGAL.dylib;/opt/local/lib/libboost_thread-mt.dylib;/opt/local/lib/libboost_system-mt.dylib;/opt/local/lib/libgmp.dylib;/opt/local/lib/libmpfr.dylib (Required is at least version "4.1")
1517:info:configure -- Found ZLIB: /opt/local/lib/libz.dylib (found version "1.2.8")
1518:info:configure -- Found PkgConfig: /opt/local/bin/pkg-config (found version "0.28")
1519:info:configure -- checking for module 'cppunit'
1520:info:configure --   found cppunit, version 1.12.1
1521:info:configure -- Found CPPUNIT: /opt/local/lib/libcppunit.dylib 
1522:info:configure -- Found unsuitable Qt version "" from NOTFOUND
1523:info:configure CMake Warning at CMakeLists.txt:488 (find_package):
1524:info:configure   Could not find a package configuration file provided by "VTK" with any of
1525:info:configure   the following names:
1526:info:configure
1527:info:configure     VTKConfig.cmake
1528:info:configure     vtk-config.cmake
1529:info:configure
1530:info:configure   Add the installation prefix of "VTK" to CMAKE_PREFIX_PATH or set "VTK_DIR"
1531:info:configure   to a directory containing one of the above files.  If "VTK" provides a
1532:info:configure   separate development package or SDK, be sure it has been installed.
1533:info:configure
1534:info:configure
1535:info:configure --
1536:info:configure -- The following optional packages were found:
1537:info:configure -- -------------------------------------------
1538:info:configure -- (OK) MPI
1539:info:configure -- (OK) PETSC
1540:info:configure -- (OK) SLEPC
1541:info:configure -- (OK) UMFPACK
1542:info:configure -- (OK) CHOLMOD
1543:info:configure -- (OK) PARMETIS
1544:info:configure -- (OK) CGAL
1545:info:configure -- (OK) ZLIB
1546:info:configure -- (OK) PYTHON
1547:info:configure --
1548:info:configure -- The following optional packages were not enabled:
1549:info:configure -- -------------------------------------------------
1550:info:configure -- (--) PETSC4PY
1551:info:configure -- (--) TRILINOS
1552:info:configure -- (--) SCOTCH
1553:info:configure -- (--) SPHINX
1554:info:configure -- (--) HDF5
1555:info:configure --
1556:info:configure -- The following optional packages were not found:
1557:info:configure -- -----------------------------------------------
1558:info:configure -- (**) OPENMP
1559:info:configure -- (**) TAO
1560:info:configure -- (**) PASTIX
1561:info:configure -- (**) VTK
1562:info:configure -- (**) QT
1563:info:configure --
1564:info:configure Fatal Python error: PyThreadState_Get: no current thread
1565:info:configure CMake Warning at dolfin/CMakeLists.txt:327 (message):
1566:info:configure   Unable to import UFC.  Install latest UFC or check that PYTHONPATH is set
1567:info:configure   appropriately.  Python will be disabled.
1568:info:configure
1569:info:configure
1570:info:configure --
1571:info:configure -- Generating form files in demo, test, bench and dolfin directories. May take some time...
1572:info:configure -- ----------------------------------------------------------------------------------------
1573:info:configure CMake Error at CMakeLists.txt:760 (message):
1574:info:configure   Generation of form files failed:
1575:info:configure
1576:info:configure   Fatal Python error: PyThreadState_Get: no current thread
1577:info:configure
1578:info:configure   sh: line 1: 24640 Abort trap: 6 ffc -v -O -f no_ferari -l dolfin
1579:info:configure   Poisson1D.ufl >> compile.log
1580:info:configure
1581:info:configure   Traceback (most recent call last):
1582:info:configure
1583:info:configure     File "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/cmake/scripts/generate-form-files", line 73, in <module>
1584:info:configure       raise RuntimeError, "Unable to compile form: %s/%s" % (root, f)
1585:info:configure
1586:info:configure   RuntimeError: Unable to compile form: dolfin/ale/Poisson1D.ufl
1587:info:configure
1588:info:configure
1589:info:configure
1590:info:configure -- Configuring incomplete, errors occurred!
1591:info:configure See also "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/build/CMakeFiles/CMakeOutput.log".
1592:info:configure See also "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/build/CMakeFiles/CMakeError.log".
1593:info:configure Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.3.0/build" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -DPYTHON_EXECUTABLE:FILEPATH=/opt/local/bin/python2.7 -DPYTHON_INCLUDE_DIR:PATH=/opt/local/Library/Frameworks/Python.framework/Headers -DPYTHON_LIBRARY:FILEPATH=/opt/local/lib/libpython2.7.dylib -DDOLFIN_INSTALL_PYTHON_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_INSTALL_PYTHON_PURE_MODULE_DIR=/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages -DDOLFIN_SKIP_BUILD_TESTS=ON -DDOLFIN_ENABLE_DOCS:BOOL=OFF -DDOLFIN_ENABLE_HDF5:BOOL=OFF -DDOLFIN_ENABLE_MPI:BOOL=ON -DDOLFIN_ENABLE_PETSC4PY:BOOL=OFF -DDOLFIN_ENABLE_SCOTCH:BOOL=OFF -DDOLFIN_ENABLE_SPHINX:BOOL=OFF -DDOLFIN_ENABLE_TRILINOS:BOOL=OFF -DDOLFIN_ENABLE_CGAL:BOOL=ON -DDOLFIN_ENABLE_PARMETIS:BOOL=ON -DDOLFIN_ENABLE_CHOLMOD:BOOL=ON -DDOLFIN_ENABLE_UMFPACK:BOOL=ON -DDOLFIN_ENABLE_PETSC:BOOL=ON -DDOLFIN_ENABLE_SLEPC:BOOL=ON -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_SYSROOT=/ -DCMAKE_OSX_DEPLOYMENT_TARGET="" -DCMAKE_C_COMPILER=mpicc-mpich-mp -DCMAKE_CXX_COMPILER=mpicxx-mpich-mp -DCMAKE_Fortran_COMPILER=mpif90-mpich-mp -DMPI_C_COMPILER=mpicc-mpich-mp -DMPI_CXX_COMPILER=mpicxx-mpich-mp -DMPI_Fortran_COMPILER=mpif90-mpich-mp ..
1594:info:configure Exit code: 1
1595:error:configure org.macports.configure for port dolfin returned: configure failure: command execution failed
1596:debug:configure Error code: NONE
1597:debug:configure Backtrace: configure failure: command execution failed
1598    while executing
1599"$procedure $targetname"
1600:info:configure Warning: targets not executed for dolfin: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install
1601:notice:configure Please see the log file for port dolfin for details:
1602    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/main.log