| 1 | version:1 |
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| 2 | :debug:clean Attempting ln -sf /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/atlas/work |
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| 3 | :debug:clean changing euid/egid - current euid: 0 - current egid: 0 |
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| 4 | :debug:clean egid changed to: 501 |
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| 5 | :debug:clean euid changed to: 502 |
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| 6 | :debug:main Executing org.macports.main (atlas) |
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| 7 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 8 | :debug:archivefetch archivefetch phase started at Thu Mar 27 13:48:11 PHT 2014 |
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| 9 | :msg:archivefetch ---> Fetching archive for atlas |
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| 10 | :debug:archivefetch Executing org.macports.archivefetch (atlas) |
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| 11 | :debug:archivefetch euid/egid changed to: 0/0 |
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| 12 | :debug:archivefetch chowned /opt/local/var/macports/incoming to macports |
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| 13 | :debug:archivefetch euid/egid changed to: 502/501 |
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| 14 | :info:archivefetch ---> atlas-3.10.1_5+mpclang33.darwin_13.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified |
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| 15 | :msg:archivefetch ---> Attempting to fetch atlas-3.10.1_5+mpclang33.darwin_13.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/atlas |
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| 16 | :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found |
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| 17 | :msg:archivefetch ---> Attempting to fetch atlas-3.10.1_5+mpclang33.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/atlas |
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| 18 | :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found |
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| 19 | :msg:archivefetch ---> Attempting to fetch atlas-3.10.1_5+mpclang33.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/atlas |
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| 20 | :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found |
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| 21 | :debug:archivefetch Privilege de-escalation not attempted as not running as root. |
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| 22 | :debug:fetch fetch phase started at Thu Mar 27 13:48:16 PHT 2014 |
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| 23 | :notice:fetch ---> Fetching distfiles for atlas |
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| 24 | :debug:fetch Can't run fetch on this port without elevated privileges. Escalating privileges back to root. |
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| 25 | :debug:fetch euid changed to: 0. egid changed to: 0. |
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| 26 | :debug:fetch changing euid/egid - current euid: 0 - current egid: 0 |
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| 27 | :debug:fetch egid changed to: 501 |
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| 28 | :debug:fetch euid changed to: 502 |
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| 29 | :debug:fetch Executing org.macports.fetch (atlas) |
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| 30 | :info:fetch ---> atlas3.10.1.tar.bz2 doesn't seem to exist in /opt/local/var/macports/distfiles/atlas |
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| 31 | :notice:fetch ---> Attempting to fetch atlas3.10.1.tar.bz2 from http://nchc.dl.sourceforge.net/project/math-atlas/Stable/3.10.1 |
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| 32 | :info:fetch ---> lapack-3.4.2.tgz doesn't seem to exist in /opt/local/var/macports/distfiles/atlas |
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| 33 | :notice:fetch ---> Attempting to fetch lapack-3.4.2.tgz from http://sea.us.distfiles.macports.org/macports/distfiles/atlas |
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| 34 | :debug:fetch Privilege de-escalation not attempted as not running as root. |
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| 35 | :debug:checksum checksum phase started at Thu Mar 27 13:48:38 PHT 2014 |
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| 36 | :notice:checksum ---> Verifying checksums for atlas |
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| 37 | :debug:checksum Executing org.macports.checksum (atlas) |
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| 38 | :info:checksum ---> Checksumming atlas3.10.1.tar.bz2 |
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| 39 | :debug:checksum Correct (rmd160) checksum for atlas3.10.1.tar.bz2 |
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| 40 | :debug:checksum Correct (sha256) checksum for atlas3.10.1.tar.bz2 |
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| 41 | :info:checksum ---> Checksumming lapack-3.4.2.tgz |
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| 42 | :debug:checksum Correct (rmd160) checksum for lapack-3.4.2.tgz |
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| 43 | :debug:checksum Correct (sha256) checksum for lapack-3.4.2.tgz |
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| 44 | :debug:checksum Privilege de-escalation not attempted as not running as root. |
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| 45 | :debug:extract extract phase started at Thu Mar 27 13:48:38 PHT 2014 |
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| 46 | :notice:extract ---> Extracting atlas |
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| 47 | :debug:extract setting option extract.cmd to /usr/bin/bzip2 |
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| 48 | :debug:extract Executing org.macports.extract (atlas) |
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| 49 | :info:extract ---> Extracting atlas3.10.1.tar.bz2 |
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| 50 | :debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/atlas/atlas3.10.1.tar.bz2' |
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| 51 | :debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' |
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| 52 | :debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work" && /usr/bin/bzip2 -dc '/opt/local/var/macports/distfiles/atlas/atlas3.10.1.tar.bz2' | /usr/bin/tar -xkf - || true' |
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| 53 | :debug:extract Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work" && /usr/bin/bzip2 -dc '/opt/local/var/macports/distfiles/atlas/atlas3.10.1.tar.bz2' | /usr/bin/tar -xkf - || true |
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| 54 | :info:extract ATLAS/CONFIG/: Already exists |
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| 55 | :info:extract ATLAS/CONFIG/src/: Already exists |
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| 56 | :info:extract ATLAS/CONFIG/src/winf77.c: Already exists |
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| 57 | :info:extract ATLAS/CONFIG/src/Makefile: Already exists |
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| 58 | :info:extract ATLAS/CONFIG/src/probe_arch.c: Already exists |
|---|
| 59 | :info:extract ATLAS/CONFIG/src/Make.ext: Already exists |
|---|
| 60 | :info:extract ATLAS/CONFIG/src/probe_asm.c: Already exists |
|---|
| 61 | :info:extract ATLAS/CONFIG/src/probe_aff.c: Already exists |
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| 62 | :info:extract ATLAS/CONFIG/src/gnuf90w.c: Already exists |
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| 63 | :info:extract ATLAS/CONFIG/src/wincc.c: Already exists |
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| 64 | :info:extract ATLAS/CONFIG/src/probe_OS.c: Already exists |
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| 65 | :info:extract ATLAS/CONFIG/src/gcc3p.c: Already exists |
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| 66 | :info:extract ATLAS/CONFIG/src/print_enums.c: Already exists |
|---|
| 67 | :info:extract ATLAS/CONFIG/src/probe_f2c.c: Already exists |
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| 68 | :info:extract ATLAS/CONFIG/src/CompMake.txt: Already exists |
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| 69 | :info:extract ATLAS/CONFIG/src/SpewMakeInc.c: Already exists |
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| 70 | :info:extract ATLAS/CONFIG/src/atlcomp.txt: Already exists |
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| 71 | :info:extract ATLAS/CONFIG/src/probe_pmake.c: Already exists |
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| 72 | :info:extract ATLAS/CONFIG/src/backend/: Already exists |
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| 73 | :info:extract ATLAS/CONFIG/src/backend/probe_dAVX.c: Already exists |
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| 74 | :info:extract ATLAS/CONFIG/src/backend/probe_dSSE3.c: Already exists |
|---|
| 75 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_arm.S: Already exists |
|---|
| 76 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_ppc.S: Already exists |
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| 77 | :info:extract ATLAS/CONFIG/src/backend/probe_NEON.S: Already exists |
|---|
| 78 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_x8664.S: Already exists |
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| 79 | :info:extract ATLAS/CONFIG/src/backend/archinfo_aix.c: Already exists |
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| 80 | :info:extract ATLAS/CONFIG/src/backend/comptestF.f: Already exists |
|---|
| 81 | :info:extract ATLAS/CONFIG/src/backend/archinfo_x86.c: Already exists |
|---|
| 82 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_s390.S: Already exists |
|---|
| 83 | :info:extract ATLAS/CONFIG/src/backend/probe_SSE3.S: Already exists |
|---|
| 84 | :info:extract ATLAS/CONFIG/src/backend/probe_SSE2.S: Already exists |
|---|
| 85 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_parisc.S: Already exists |
|---|
| 86 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_PBIND.c: Already exists |
|---|
| 87 | :info:extract ATLAS/CONFIG/src/backend/Make.ext: Already exists |
|---|
| 88 | :info:extract ATLAS/CONFIG/src/backend/archinfo_sfu.c: Already exists |
|---|
| 89 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_mips.S: Already exists |
|---|
| 90 | :info:extract ATLAS/CONFIG/src/backend/probe_dvec.c: Already exists |
|---|
| 91 | :info:extract ATLAS/CONFIG/src/backend/c2cmaster.c: Already exists |
|---|
| 92 | :info:extract ATLAS/CONFIG/src/backend/f2cintC.c: Already exists |
|---|
| 93 | :info:extract ATLAS/CONFIG/src/backend/flibchkF.f: Already exists |
|---|
| 94 | :info:extract ATLAS/CONFIG/src/backend/probe_AVXMAC.S: Already exists |
|---|
| 95 | :info:extract ATLAS/CONFIG/src/backend/probe_this_asm.c: Already exists |
|---|
| 96 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_WIN64.c: Already exists |
|---|
| 97 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_BINDP.c: Already exists |
|---|
| 98 | :info:extract ATLAS/CONFIG/src/backend/probe_VSX.S: Already exists |
|---|
| 99 | :info:extract ATLAS/CONFIG/src/backend/c2cslave.c: Already exists |
|---|
| 100 | :info:extract ATLAS/CONFIG/src/backend/comptestC.c: Already exists |
|---|
| 101 | :info:extract ATLAS/CONFIG/src/backend/archinfo_irix.c: Already exists |
|---|
| 102 | :info:extract ATLAS/CONFIG/src/backend/probe_AVXFMA4.S: Already exists |
|---|
| 103 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_WIN.c: Already exists |
|---|
| 104 | :info:extract ATLAS/CONFIG/src/backend/flibchkC.c: Already exists |
|---|
| 105 | :info:extract ATLAS/CONFIG/src/backend/cpuid.S: Already exists |
|---|
| 106 | :info:extract ATLAS/CONFIG/src/backend/probe_AltiVec.S: Already exists |
|---|
| 107 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_SCHED.c: Already exists |
|---|
| 108 | :info:extract ATLAS/CONFIG/src/backend/f2cnameC.c: Already exists |
|---|
| 109 | :info:extract ATLAS/CONFIG/src/backend/f2cstrC.c: Already exists |
|---|
| 110 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_RUNON.c: Already exists |
|---|
| 111 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_x8632.S: Already exists |
|---|
| 112 | :info:extract ATLAS/CONFIG/src/backend/probe_gas_sparc.S: Already exists |
|---|
| 113 | :info:extract ATLAS/CONFIG/src/backend/probe_SSE1.S: Already exists |
|---|
| 114 | :info:extract ATLAS/CONFIG/src/backend/archinfo_linux.c: Already exists |
|---|
| 115 | :info:extract ATLAS/CONFIG/src/backend/archinfo_freebsd.c: Already exists |
|---|
| 116 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_SETPROCNP.c: Already exists |
|---|
| 117 | :info:extract ATLAS/CONFIG/src/backend/archinfo_win.c: Already exists |
|---|
| 118 | :info:extract ATLAS/CONFIG/src/backend/probe_3DNow.S: Already exists |
|---|
| 119 | :info:extract ATLAS/CONFIG/src/backend/probe_svec.c: Already exists |
|---|
| 120 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_CPUSET.c: Already exists |
|---|
| 121 | :info:extract ATLAS/CONFIG/src/backend/f2cintF.f: Already exists |
|---|
| 122 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_SETAFFNP.c: Already exists |
|---|
| 123 | :info:extract ATLAS/CONFIG/src/backend/f2cstrF.f: Already exists |
|---|
| 124 | :info:extract ATLAS/CONFIG/src/backend/archinfo_sunos.c: Already exists |
|---|
| 125 | :info:extract ATLAS/CONFIG/src/backend/probe_aff_PLPA.c: Already exists |
|---|
| 126 | :info:extract ATLAS/CONFIG/src/backend/probe_AVX.S: Already exists |
|---|
| 127 | :info:extract ATLAS/CONFIG/src/backend/f2cnameF.f: Already exists |
|---|
| 128 | :info:extract ATLAS/CONFIG/src/atlbench.c: Already exists |
|---|
| 129 | :info:extract ATLAS/CONFIG/src/config.c: Already exists |
|---|
| 130 | :info:extract ATLAS/CONFIG/src/IsGcc.c: Already exists |
|---|
| 131 | :info:extract ATLAS/CONFIG/src/ATLrun.sh: Already exists |
|---|
| 132 | :info:extract ATLAS/CONFIG/src/probe_vec.c: Already exists |
|---|
| 133 | :info:extract ATLAS/CONFIG/src/atlconf_misc.c: Already exists |
|---|
| 134 | :info:extract ATLAS/CONFIG/src/mgwcmp.c: Already exists |
|---|
| 135 | :info:extract ATLAS/CONFIG/src/probe_comp.c: Already exists |
|---|
| 136 | :info:extract ATLAS/CONFIG/src/gnuccw.c: Already exists |
|---|
| 137 | :info:extract ATLAS/CONFIG/include/: Already exists |
|---|
| 138 | :info:extract ATLAS/CONFIG/include/atlconf_misc.h: Already exists |
|---|
| 139 | :info:extract ATLAS/CONFIG/include/atlas_asm.h: Already exists |
|---|
| 140 | :info:extract ATLAS/CONFIG/include/Make.ext: Already exists |
|---|
| 141 | :info:extract ATLAS/CONFIG/include/atlconf.h: Already exists |
|---|
| 142 | :info:extract ATLAS/CONFIG/include/atlas_sys.h: Already exists |
|---|
| 143 | :info:extract ATLAS/include/C_lapack.h: Already exists |
|---|
| 144 | :info:extract tar: Error exit delayed from previous errors. |
|---|
| 145 | :debug:extract euid/egid changed to: 0/0 |
|---|
| 146 | :debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work to macports |
|---|
| 147 | :debug:extract euid/egid changed to: 502/501 |
|---|
| 148 | :debug:extract Privilege de-escalation not attempted as not running as root. |
|---|
| 149 | :debug:patch patch phase started at Thu Mar 27 13:48:40 PHT 2014 |
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| 150 | :debug:patch Executing org.macports.patch (atlas) |
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| 151 | :notice:patch ---> Applying patches to atlas |
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| 152 | :info:patch ---> Applying patch-emit_mm_c.diff |
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| 153 | :debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' |
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| 154 | :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0' |
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| 155 | :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/atlas/files/patch-emit_mm_c.diff' |
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| 156 | :info:patch patching file tune/blas/gemm/emit_mm.c |
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| 157 | :info:patch ---> Applying patch-ATL_cmm4x4x128_av_c.diff |
|---|
| 158 | :debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' |
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| 159 | :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0' |
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| 160 | :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/atlas/files/patch-ATL_cmm4x4x128_av_c.diff' |
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| 161 | :info:patch patching file tune/blas/gemm/CASES/ATL_cmm4x4x128_av.c |
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| 162 | :info:patch ---> Applying patch-makes-Make.lib.diff |
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| 163 | :debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9' |
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| 164 | :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0' |
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| 165 | :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/atlas/files/patch-makes-Make.lib.diff' |
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| 166 | :info:patch patching file makes/Make.lib |
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| 167 | :debug:patch Executing proc-post-org.macports.patch-patch-0 |
|---|
| 168 | :debug:patch Privilege de-escalation not attempted as not running as root. |
|---|
| 169 | :debug:configure configure phase started at Thu Mar 27 13:48:40 PHT 2014 |
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| 170 | :notice:configure ---> Configuring atlas |
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| 171 | :debug:configure Using compiler 'MacPorts Clang 3.3' |
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| 172 | :debug:configure Executing proc-pre-org.macports.configure-configure-0 |
|---|
| 173 | :msg:configure Selected C compiler: /opt/local/bin/clang-mp-3.3 |
|---|
| 174 | :error:configure org.macports.configure for port atlas returned: Atlas could not detect any fortran compiler. If you really don’t need the fortran interface to be built, please use the +nofortran option, else install a fortran compiler (e.g. gcc4X) before building Atlas. |
|---|
| 175 | :debug:configure Error code: NONE |
|---|
| 176 | :debug:configure Backtrace: Atlas could not detect any fortran compiler. If you really don’t need the fortran interface to be built, please use the +nofortran option, else install a fortran compiler (e.g. gcc4X) before building Atlas. |
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| 177 | while executing |
|---|
| 178 | "$pre $targetname" |
|---|
| 179 | :info:configure Warning: targets not executed for atlas: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install |
|---|
| 180 | :error:configure Failed to install atlas |
|---|
| 181 | :debug:configure could not read "/opt/local/share/doc/clang-3.3/ps/clang.ps": no such file or directory |
|---|
| 182 | while executing |
|---|
| 183 | "::file type $file" |
|---|
| 184 | :notice:configure Please see the log file for port atlas for details: |
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| 185 | /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log |
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