Ticket #43693: main.log

File main.log, 27.9 KB (added by serra@…, 10 years ago)

main.log from attempted install of hdf5-18

Line 
1version:1
2:debug:main epoch: in tree: 2 installed: 2
3:debug:main gcc48 4.8.2_0 exists in the ports tree
4:debug:main gcc48 4.8.2_0  is the latest installed
5:debug:main gcc48 4.8.2_0  is active
6:debug:main Merging existing variants '' into variants
7:debug:main new fully merged portvariants:
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/gcc48
9:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
10:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
11:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
12:debug:main universal variant already exists, so not adding the default one
13:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
14:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
15:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
16:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
17:debug:main No need to upgrade! gcc48 4.8.2_0 >= gcc48 4.8.2_0
18:debug:main epoch: in tree: 0 installed: 0
19:debug:main gmp 6.0.0_0 exists in the ports tree
20:debug:main gmp 6.0.0_0  is the latest installed
21:debug:main gmp 6.0.0_0  is active
22:debug:main Merging existing variants '' into variants
23:debug:main new fully merged portvariants:
24:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/gmp
25:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
26:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
27:debug:main universal variant already exists, so not adding the default one
28:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
29:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
30:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
31:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
32:debug:main No need to upgrade! gmp 6.0.0_0 >= gmp 6.0.0_0
33:debug:main epoch: in tree: 0 installed: 0
34:debug:main mpfr 3.1.1-p2_0 exists in the ports tree
35:debug:main mpfr 3.1.1-p2_0  is the latest installed
36:debug:main mpfr 3.1.1-p2_0  is active
37:debug:main Merging existing variants '' into variants
38:debug:main new fully merged portvariants:
39:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/mpfr
40:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
41:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
42:debug:main universal variant already exists, so not adding the default one
43:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
44:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
45:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
46:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
47:debug:main No need to upgrade! mpfr 3.1.1-p2_0 >= mpfr 3.1.1-p2_0
48:debug:main epoch: in tree: 0 installed: 0
49:debug:main libiconv 1.14_0 exists in the ports tree
50:debug:main libiconv 1.14_0  is the latest installed
51:debug:main libiconv 1.14_0  is active
52:debug:main Merging existing variants '' into variants
53:debug:main new fully merged portvariants:
54:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/libiconv
55:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
56:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
57:debug:main universal variant already exists, so not adding the default one
58:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
59:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
60:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
61:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
62:debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
63:debug:main epoch: in tree: 0 installed: 0
64:debug:main libmpc 1.0.2_0 exists in the ports tree
65:debug:main libmpc 1.0.2_0  is the latest installed
66:debug:main libmpc 1.0.2_0  is active
67:debug:main Merging existing variants '' into variants
68:debug:main new fully merged portvariants:
69:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libmpc
70:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
71:debug:main adding the default universal variant
72:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
73:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
74:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
75:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
76:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
77:debug:main No need to upgrade! libmpc 1.0.2_0 >= libmpc 1.0.2_0
78:debug:main epoch: in tree: 1 installed: 1
79:debug:main cloog 0.18.1_0 exists in the ports tree
80:debug:main cloog 0.18.1_0  is the latest installed
81:debug:main cloog 0.18.1_0  is active
82:debug:main Merging existing variants '' into variants
83:debug:main new fully merged portvariants:
84:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/cloog
85:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
86:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
87:debug:main universal variant already exists, so not adding the default one
88:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
89:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
90:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
91:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
92:debug:main No need to upgrade! cloog 0.18.1_0 >= cloog 0.18.1_0
93:debug:main epoch: in tree: 2 installed: 2
94:debug:main isl 0.12.2_0 exists in the ports tree
95:debug:main isl 0.12.2_0  is the latest installed
96:debug:main isl 0.12.2_0  is active
97:debug:main Merging existing variants '' into variants
98:debug:main new fully merged portvariants:
99:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/isl
100:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
101:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
102:debug:main universal variant already exists, so not adding the default one
103:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
104:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
105:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
106:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
107:debug:main No need to upgrade! isl 0.12.2_0 >= isl 0.12.2_0
108:debug:main epoch: in tree: 2 installed: 2
109:debug:main libgcc 4.8.2_0 exists in the ports tree
110:debug:main libgcc 4.8.2_0  is the latest installed
111:debug:main libgcc 4.8.2_0  is active
112:debug:main Merging existing variants '' into variants
113:debug:main new fully merged portvariants:
114:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/gcc48
115:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
116:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
117:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
118:debug:main universal variant already exists, so not adding the default one
119:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
120:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
121:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
122:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
123:debug:main No need to upgrade! libgcc 4.8.2_0 >= libgcc 4.8.2_0
124:debug:main epoch: in tree: 0 installed: 0
125:debug:main gcc_select 0.1_8 exists in the ports tree
126:debug:main gcc_select 0.1_8  is the latest installed
127:debug:main gcc_select 0.1_8  is active
128:debug:main Merging existing variants '' into variants
129:debug:main new fully merged portvariants:
130:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/sysutils/gcc_select
131:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
132:debug:main universal_variant is false, so not adding the default universal variant
133:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
134:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
135:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
136:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
137:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
138:debug:main epoch: in tree: 0 installed: 0
139:debug:main ld64 136_2 exists in the ports tree
140:debug:main ld64 136_2 +llvm33 is the latest installed
141:debug:main ld64 136_2 +llvm33 is active
142:debug:main Merging existing variants '+llvm33' into variants
143:debug:main new fully merged portvariants: llvm33 +
144:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ld64
145:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
146:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
147:debug:main universal variant already exists, so not adding the default one
148:debug:main Executing variant llvm33 provides llvm33
149:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
150:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
151:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
152:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
153:debug:main No need to upgrade! ld64 136_2 >= ld64 136_2
154:debug:main epoch: in tree: 1 installed: 1
155:debug:main llvm-3.3 3.3_1 exists in the ports tree
156:debug:main llvm-3.3 3.3_1  is the latest installed
157:debug:main llvm-3.3 3.3_1  is active
158:debug:main Merging existing variants '' into variants
159:debug:main new fully merged portvariants:
160:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/llvm-3.3
161:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
162:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
163:debug:main universal variant already exists, so not adding the default one
164:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
165:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
166:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
167:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
168:debug:main No need to upgrade! llvm-3.3 3.3_1 >= llvm-3.3 3.3_1
169:debug:main epoch: in tree: 0 installed: 0
170:debug:main libffi 3.0.13_0 exists in the ports tree
171:debug:main libffi 3.0.13_0  is the latest installed
172:debug:main libffi 3.0.13_0  is active
173:debug:main Merging existing variants '' into variants
174:debug:main new fully merged portvariants:
175:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/libffi
176:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
177:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
178:debug:main universal variant already exists, so not adding the default one
179:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
180:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
181:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
182:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
183:debug:main No need to upgrade! libffi 3.0.13_0 >= libffi 3.0.13_0
184:debug:main Found Dependency: path: /usr/bin filename: perl regex: ^perl$
185:debug:main perl5 is *not* installed by MacPorts
186:debug:main Searching for dependency: perl5
187:debug:main Didn't find receipt, going to depspec regex for: perl5
188:debug:main Found Dependency: path: /usr/bin filename: perl regex: ^perl$
189:debug:main perl5 not installed, soft dependency satisfied
190:debug:main epoch: in tree: 0 installed: 0
191:debug:main llvm_select 0.2_0 exists in the ports tree
192:debug:main llvm_select 0.2_0  is the latest installed
193:debug:main llvm_select 0.2_0  is active
194:debug:main Merging existing variants '' into variants
195:debug:main new fully merged portvariants:
196:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/sysutils/llvm_select
197:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
198:debug:main universal_variant is false, so not adding the default universal variant
199:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
200:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
201:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
202:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
203:debug:main No need to upgrade! llvm_select 0.2_0 >= llvm_select 0.2_0
204:debug:main epoch: in tree: 0 installed: 0
205:debug:main cctools 845_1 exists in the ports tree
206:debug:main cctools 845_1 +llvm33 is the latest installed
207:debug:main cctools 845_1 +llvm33 is active
208:debug:main Merging existing variants '+llvm33' into variants
209:debug:main new fully merged portvariants: llvm33 +
210:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/cctools
211:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
212:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
213:debug:main universal variant already exists, so not adding the default one
214:debug:main Executing variant llvm33 provides llvm33
215:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
216:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
217:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
218:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
219:debug:main No need to upgrade! cctools 845_1 >= cctools 845_1
220:debug:main epoch: in tree: 0 installed: 0
221:debug:main cctools-headers 845_0 exists in the ports tree
222:debug:main cctools-headers 845_0  is the latest installed
223:debug:main cctools-headers 845_0  is active
224:debug:main Merging existing variants '' into variants
225:debug:main new fully merged portvariants:
226:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/cctools-headers
227:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
228:debug:main universal_variant is false, so not adding the default universal variant
229:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
230:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
231:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
232:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
233:debug:main No need to upgrade! cctools-headers 845_0 >= cctools-headers 845_0
234:debug:main epoch: in tree: 0 installed: 0
235:debug:main zlib 1.2.8_0 exists in the ports tree
236:debug:main zlib 1.2.8_0  is the latest installed
237:debug:main zlib 1.2.8_0  is active
238:debug:main Merging existing variants '' into variants
239:debug:main new fully merged portvariants:
240:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/zlib
241:debug:main OS darwin/13.1.0 (Mac OS X 10.9) arch i386
242:debug:main adding the default universal variant
243:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf
244:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
245:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
246:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
247:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
248:debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0
249:msg:main --->  Computing dependencies for hdf5-18:info:main .:debug:main Checking for conflicts against hdf5-18
250:debug:main Searching for dependency: hdf5
251:debug:main Didn't find receipt, going to depspec regex for: hdf5
252:debug:main Searching for dependency: gcc48
253:debug:main Found Dependency: receipt exists for gcc48
254:debug:main Searching for dependency: zlib
255:debug:main Found Dependency: receipt exists for zlib
256:debug:main Searching for dependency: libgcc
257:debug:main Found Dependency: receipt exists for libgcc
258:msg:main
259:debug:main Executing org.macports.main (hdf5-18)
260:debug:main changing euid/egid - current euid: 0 - current egid: 0
261:debug:main egid changed to: 501
262:debug:main euid changed to: 501
263:debug:archivefetch archivefetch phase started at Mon May 12 15:50:11 MST 2014
264:msg:archivefetch --->  Fetching archive for hdf5-18
265:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
266:debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: zlib libgcc
267:debug:archivefetch Executing org.macports.archivefetch (hdf5-18)
268:debug:archivefetch euid/egid changed to: 0/0
269:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
270:debug:archivefetch euid/egid changed to: 501/501
271:info:archivefetch --->  hdf5-18-1.8.12_1+cxx+gcc48.darwin_13.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
272:msg:archivefetch --->  Attempting to fetch hdf5-18-1.8.12_1+cxx+gcc48.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/hdf5-18
273:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
274:msg:archivefetch --->  Attempting to fetch hdf5-18-1.8.12_1+cxx+gcc48.darwin_13.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/hdf5-18
275:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
276:msg:archivefetch --->  Attempting to fetch hdf5-18-1.8.12_1+cxx+gcc48.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/hdf5-18
277:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
278:debug:archivefetch Privilege de-escalation not attempted as not running as root.
279:debug:fetch fetch phase started at Mon May 12 15:50:14 MST 2014
280:notice:fetch --->  Fetching distfiles for hdf5-18
281:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
282:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
283:debug:fetch Executing proc-pre-org.macports.fetch-fetch-2
284:debug:fetch Executing org.macports.fetch (hdf5-18)
285:debug:fetch Privilege de-escalation not attempted as not running as root.
286:debug:checksum checksum phase started at Mon May 12 15:50:15 MST 2014
287:notice:checksum --->  Verifying checksums for hdf5-18
288:debug:checksum Executing org.macports.checksum (hdf5-18)
289:info:checksum --->  Checksumming hdf5-1.8.12.tar.bz2
290:debug:checksum Correct (rmd160) checksum for hdf5-1.8.12.tar.bz2
291:debug:checksum Correct (sha256) checksum for hdf5-1.8.12.tar.bz2
292:debug:checksum Privilege de-escalation not attempted as not running as root.
293:debug:extract extract phase started at Mon May 12 15:50:15 MST 2014
294:notice:extract --->  Extracting hdf5-18
295:debug:extract setting option extract.cmd to /usr/bin/bzip2
296:debug:extract Executing org.macports.extract (hdf5-18)
297:info:extract --->  Extracting hdf5-1.8.12.tar.bz2
298:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/hdf5-18/hdf5-1.8.12.tar.bz2'
299:debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.9'
300:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work" && /usr/bin/bzip2 -dc '/opt/local/var/macports/distfiles/hdf5-18/hdf5-1.8.12.tar.bz2' | /usr/bin/tar -xf -'
301:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work" && /usr/bin/bzip2 -dc '/opt/local/var/macports/distfiles/hdf5-18/hdf5-1.8.12.tar.bz2' | /usr/bin/tar -xf -
302:debug:extract euid/egid changed to: 0/0
303:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work to macports
304:debug:extract euid/egid changed to: 501/501
305:debug:extract Privilege de-escalation not attempted as not running as root.
306:debug:patch patch phase started at Mon May 12 15:50:23 MST 2014
307:debug:patch Executing org.macports.patch (hdf5-18)
308:debug:patch Privilege de-escalation not attempted as not running as root.
309:debug:configure configure phase started at Mon May 12 15:50:23 MST 2014
310:notice:configure --->  Configuring hdf5-18
311:debug:configure Using compiler 'Xcode Clang'
312:debug:configure Executing proc-pre-org.macports.configure-configure-0
313:debug:configure Executing proc-pre-org.macports.configure-configure-1
314:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: zlib libgcc gcc48
315:debug:configure Executing org.macports.configure (hdf5-18)
316:debug:configure Environment: CPATH='/opt/local/include' CFLAGS='-pipe -Os' CPPFLAGS='-I/opt/local/include' CXXFLAGS='-pipe -Os' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.9' CXX='/opt/local/bin/g++-mp-4.8' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -Os' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names' FCFLAGS='-pipe -Os' OBJC='/opt/local/bin/gcc-mp-4.8' OBJCXX='/usr/bin/clang++' INSTALL='/usr/bin/install -c' F90='/opt/local/bin/gfortran-mp-4.8' FC='/opt/local/bin/gfortran-mp-4.8' FFLAGS='-pipe -Os' OBJCXXFLAGS='-pipe -Os -arch x86_64' OBJCFLAGS='-pipe -Os' F77='/opt/local/bin/gfortran-mp-4.8' CC_PRINT_OPTIONS='YES' CC='/opt/local/bin/gcc-mp-4.8'
317:debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.12" && ./configure --prefix=/opt/local --with-zlib=yes --enable-filters=all --enable-production --disable-fortran --enable-shared --enable-static --disable-parallel --disable-threadsafe --enable-cxx'
318:debug:configure Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.12" && ./configure --prefix=/opt/local --with-zlib=yes --enable-filters=all --enable-production --disable-fortran --enable-shared --enable-static --disable-parallel --disable-threadsafe --enable-cxx
319:info:configure checking for a BSD-compatible install... /usr/bin/install -c
320:info:configure checking whether build environment is sane... yes
321:info:configure checking for a thread-safe mkdir -p... bin/install-sh -c -d
322:info:configure checking for gawk... no
323:info:configure checking for mawk... no
324:info:configure checking for nawk... no
325:info:configure checking for awk... awk
326:info:configure checking whether make sets $(MAKE)... yes
327:info:configure checking whether make supports nested variables... yes
328:info:configure checking whether to enable maintainer-specific portions of Makefiles... no
329:info:configure checking build system type... i386-apple-darwin13.1.0
330:info:configure checking host system type... i386-apple-darwin13.1.0
331:info:configure checking shell variables initial values... done
332:info:configure checking if basename works... yes
333:info:configure checking if xargs works... yes
334:info:configure checking for cached host... none
335:info:configure checking for config i386-apple-darwin13.1.0... no
336:info:configure checking for config i386-apple-darwin13.1.0... no
337:info:configure checking for config apple-darwin13.1.0... no
338:info:configure checking for config apple-darwin13.1.0... no
339:info:configure checking for config i386-darwin13.1.0... no
340:info:configure checking for config i386-darwin13.1.0... no
341:info:configure checking for config i386-apple... no
342:info:configure checking for config darwin13.1.0... no
343:info:configure checking for config darwin13.1.0... no
344:info:configure checking for config apple... found
345:info:configure compiler '/opt/local/bin/gcc-mp-4.8' is GNU gcc-4.8.2
346:info:configure compiler '/opt/local/bin/gfortran-mp-4.8' is GNU gfortran-4.8.2
347:info:configure checking for config ./config/site-specific/host-ocean.atmo.arizona.edu... no
348:info:configure checking for config ./config/site-specific/host-atmo.arizona.edu... no
349:info:configure checking for config ./config/site-specific/host-arizona.edu... no
350:info:configure checking for config ./config/site-specific/host-edu... no
351:info:configure checking for gcc... /opt/local/bin/gcc-mp-4.8
352:info:configure checking whether the C compiler works... yes
353:info:configure checking for C compiler default output file name... a.out
354:info:configure checking for suffix of executables...
355:info:configure checking whether we are cross compiling... configure: error: in `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.12':
356:info:configure configure: error: cannot run C compiled programs.
357:info:configure If you meant to cross compile, use `--host'.
358:info:configure See `config.log' for more details
359:info:configure Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.12" && ./configure --prefix=/opt/local --with-zlib=yes --enable-filters=all --enable-production --disable-fortran --enable-shared --enable-static --disable-parallel --disable-threadsafe --enable-cxx
360:info:configure Exit code: 1
361:error:configure Failed to configure hdf5-18, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.12/config.log
362:error:configure org.macports.configure for port hdf5-18 returned: configure failure: command execution failed
363:debug:configure Error code: NONE
364:debug:configure Backtrace: configure failure: command execution failed
365    while executing
366"$procedure $targetname"
367:info:configure Warning: targets not executed for hdf5-18: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install
368:notice:configure Please see the log file for port hdf5-18 for details:
369    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/hdf5-18/main.log