Ticket #44075: netcdf_main.log

File netcdf_main.log, 60.0 KB (added by richard.j.tisinai@…, 10 years ago)

main.log

Line 
1version:1
2:debug:main epoch: in tree: 0 installed: 0
3:debug:main hdf5-18 1.8.13_0 exists in the ports tree
4:debug:main hdf5-18 1.8.13_0 +cxx is the latest installed
5:debug:main hdf5-18 1.8.13_0 +cxx is active
6:debug:main Merging existing variants '+cxx' into variants
7:debug:main new fully merged portvariants: cxx +
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/hdf5-18
9:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
10:debug:main Sourcing PortGroup conflicts_build 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/conflicts_build-1.0.tcl
11:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
12:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
13:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
14:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
15:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
16:debug:main universal variant already exists, so not adding the default one
17:debug:main Executing variant cxx provides cxx
18:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
19:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
20:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
21:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
22:debug:main No need to upgrade! hdf5-18 1.8.13_0 >= hdf5-18 1.8.13_0
23:debug:main epoch: in tree: 0 installed: 0
24:debug:main zlib 1.2.8_0 exists in the ports tree
25:debug:main zlib 1.2.8_0  is the latest installed
26:debug:main zlib 1.2.8_0  is active
27:debug:main Merging existing variants '' into variants
28:debug:main new fully merged portvariants:
29:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib
30:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
31:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
32:debug:main adding the default universal variant
33:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
34:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
35:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
36:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
37:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
38:debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0
39:debug:main epoch: in tree: 0 installed: 0
40:debug:main hdf4 4.2.9_0 exists in the ports tree
41:debug:main hdf4 4.2.9_0 +gcc48 is the latest installed
42:debug:main hdf4 4.2.9_0 +gcc48 is active
43:debug:main Merging existing variants '+gcc48' into variants
44:debug:main new fully merged portvariants: gcc48 +
45:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/hdf4
46:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
47:debug:main adding the default universal variant
48:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
49:debug:main Executing variant gcc48 provides gcc48
50:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
51:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
52:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
53:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
54:debug:main No need to upgrade! hdf4 4.2.9_0 >= hdf4 4.2.9_0
55:debug:main epoch: in tree: 0 installed: 0
56:debug:main jpeg 9a_1 exists in the ports tree
57:debug:main jpeg 9a_1  is the latest installed
58:debug:main jpeg 9a_1  is active
59:debug:main Merging existing variants '' into variants
60:debug:main new fully merged portvariants:
61:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jpeg
62:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
63:debug:main adding the default universal variant
64:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
65:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
66:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
67:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
68:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
69:debug:main No need to upgrade! jpeg 9a_1 >= jpeg 9a_1
70:debug:main epoch: in tree: 2 installed: 2
71:debug:main libgcc 4.8.2_2 exists in the ports tree
72:debug:main libgcc 4.8.2_2  is the latest installed
73:debug:main libgcc 4.8.2_2  is active
74:debug:main Merging existing variants '' into variants
75:debug:main new fully merged portvariants:
76:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/gcc48
77:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
78:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
79:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
80:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
81:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
82:debug:main universal variant already exists, so not adding the default one
83:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
84:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
85:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
86:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
87:debug:main No need to upgrade! libgcc 4.8.2_2 >= libgcc 4.8.2_2
88:debug:main epoch: in tree: 0 installed: 0
89:debug:main gmp 6.0.0_0 exists in the ports tree
90:debug:main gmp 6.0.0_0  is the latest installed
91:debug:main gmp 6.0.0_0  is active
92:debug:main Merging existing variants '' into variants
93:debug:main new fully merged portvariants:
94:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gmp
95:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
96:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
97:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
98:debug:main universal variant already exists, so not adding the default one
99:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
100:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
101:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
102:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
103:debug:main No need to upgrade! gmp 6.0.0_0 >= gmp 6.0.0_0
104:debug:main epoch: in tree: 0 installed: 0
105:debug:main mpfr 3.1.1-p2_0 exists in the ports tree
106:debug:main mpfr 3.1.1-p2_0  is the latest installed
107:debug:main mpfr 3.1.1-p2_0  is active
108:debug:main Merging existing variants '' into variants
109:debug:main new fully merged portvariants:
110:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/mpfr
111:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
112:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
113:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
114:debug:main universal variant already exists, so not adding the default one
115:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
116:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
117:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
118:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
119:debug:main No need to upgrade! mpfr 3.1.1-p2_0 >= mpfr 3.1.1-p2_0
120:debug:main epoch: in tree: 0 installed: 0
121:debug:main libiconv 1.14_0 exists in the ports tree
122:debug:main libiconv 1.14_0  is the latest installed
123:debug:main libiconv 1.14_0  is active
124:debug:main Merging existing variants '' into variants
125:debug:main new fully merged portvariants:
126:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv
127:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
128:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
129:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
130:debug:main universal variant already exists, so not adding the default one
131:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
132:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
133:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
134:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
135:debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
136:debug:main epoch: in tree: 0 installed: 0
137:debug:main libmpc 1.0.2_0 exists in the ports tree
138:debug:main libmpc 1.0.2_0  is the latest installed
139:debug:main libmpc 1.0.2_0  is active
140:debug:main Merging existing variants '' into variants
141:debug:main new fully merged portvariants:
142:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libmpc
143:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
144:debug:main adding the default universal variant
145:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
146:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
147:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
148:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
149:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
150:debug:main No need to upgrade! libmpc 1.0.2_0 >= libmpc 1.0.2_0
151:debug:main epoch: in tree: 1 installed: 1
152:debug:main cloog 0.18.2_0 exists in the ports tree
153:debug:main cloog 0.18.2_0  is the latest installed
154:debug:main cloog 0.18.2_0  is active
155:debug:main Merging existing variants '' into variants
156:debug:main new fully merged portvariants:
157:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cloog
158:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
159:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
160:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
161:debug:main universal variant already exists, so not adding the default one
162:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
163:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
164:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
165:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
166:debug:main No need to upgrade! cloog 0.18.2_0 >= cloog 0.18.2_0
167:debug:main epoch: in tree: 2 installed: 2
168:debug:main isl 0.13_0 exists in the ports tree
169:debug:main isl 0.13_0  is the latest installed
170:debug:main isl 0.13_0  is active
171:debug:main Merging existing variants '' into variants
172:debug:main new fully merged portvariants:
173:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/isl
174:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
175:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
176:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
177:debug:main universal variant already exists, so not adding the default one
178:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
179:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
180:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
181:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
182:debug:main No need to upgrade! isl 0.13_0 >= isl 0.13_0
183:debug:main epoch: in tree: 0 installed: 0
184:debug:main gcc_select 0.1_8 exists in the ports tree
185:debug:main gcc_select 0.1_8  is the latest installed
186:debug:main gcc_select 0.1_8  is active
187:debug:main Merging existing variants '' into variants
188:debug:main new fully merged portvariants:
189:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/gcc_select
190:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
191:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
192:debug:main universal_variant is false, so not adding the default universal variant
193:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
194:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
195:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
196:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
197:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
198:debug:main epoch: in tree: 1 installed: 1
199:debug:main ld64 236.3_1 exists in the ports tree
200:debug:main ld64 236.3_1 +llvm34 is the latest installed
201:debug:main ld64 236.3_1 +llvm34 is active
202:debug:main Merging existing variants '+llvm34' into variants
203:debug:main new fully merged portvariants: llvm34 +
204:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ld64
205:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
206:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
207:debug:main universal variant already exists, so not adding the default one
208:debug:main Executing variant llvm34 provides llvm34
209:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
210:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
211:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
212:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
213:debug:main No need to upgrade! ld64 236.3_1 >= ld64 236.3_1
214:debug:main epoch: in tree: 1 installed: 1
215:debug:main llvm-3.4 3.4_3 exists in the ports tree
216:debug:main llvm-3.4 3.4_3  is the latest installed
217:debug:main llvm-3.4 3.4_3  is active
218:debug:main Merging existing variants '' into variants
219:debug:main new fully merged portvariants:
220:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/llvm-3.4
221:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
222:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
223:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
224:debug:main universal variant already exists, so not adding the default one
225:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
226:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
227:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
228:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
229:debug:main No need to upgrade! llvm-3.4 3.4_3 >= llvm-3.4 3.4_3
230:debug:main epoch: in tree: 0 installed: 0
231:debug:main libffi 3.0.13_0 exists in the ports tree
232:debug:main libffi 3.0.13_0  is the latest installed
233:debug:main libffi 3.0.13_0  is active
234:debug:main Merging existing variants '' into variants
235:debug:main new fully merged portvariants:
236:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libffi
237:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
238:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
239:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
240:debug:main universal variant already exists, so not adding the default one
241:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
242:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
243:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
244:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
245:debug:main No need to upgrade! libffi 3.0.13_0 >= libffi 3.0.13_0
246:debug:main epoch: in tree: 0 installed: 0
247:debug:main perl5 5.12.4_0 exists in the ports tree
248:debug:main perl5 5.12.4_0 +perl5_16 is the latest installed
249:debug:main perl5 5.12.4_0 +perl5_16 is active
250:debug:main Merging existing variants '+perl5_16' into variants
251:debug:main new fully merged portvariants: perl5_16 +
252:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
253:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
254:debug:main universal_variant is false, so not adding the default universal variant
255:debug:main Executing variant perl5_16 provides perl5_16
256:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
257:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
258:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
259:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
260:debug:main No need to upgrade! perl5 5.12.4_0 >= perl5 5.12.4_0
261:debug:main epoch: in tree: 0 installed: 0
262:debug:main perl5.16 5.16.3_0 exists in the ports tree
263:debug:main perl5.16 5.16.3_0  is the latest installed
264:debug:main perl5.16 5.16.3_0  is active
265:debug:main Merging existing variants '' into variants
266:debug:main new fully merged portvariants:
267:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5.16
268:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
269:debug:main adding the default universal variant
270:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
271:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
272:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
273:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
274:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
275:debug:main No need to upgrade! perl5.16 5.16.3_0 >= perl5.16 5.16.3_0
276:debug:main epoch: in tree: 0 installed: 0
277:debug:main gdbm 1.11_0 exists in the ports tree
278:debug:main gdbm 1.11_0  is the latest installed
279:debug:main gdbm 1.11_0  is active
280:debug:main Merging existing variants '' into variants
281:debug:main new fully merged portvariants:
282:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm
283:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
284:debug:main adding the default universal variant
285:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
286:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
287:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
288:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
289:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
290:debug:main No need to upgrade! gdbm 1.11_0 >= gdbm 1.11_0
291:debug:main epoch: in tree: 2 installed: 2
292:debug:main gettext 0.19.1_0 exists in the ports tree
293:debug:main gettext 0.19.1_0  is the latest installed
294:debug:main gettext 0.19.1_0  is active
295:debug:main Merging existing variants '' into variants
296:debug:main new fully merged portvariants:
297:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext
298:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
299:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
300:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
301:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
302:debug:main compiler clang 503.0.40 not blacklisted because it doesn't match {clang < 211.10.1}
303:debug:main universal variant already exists, so not adding the default one
304:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
305:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
306:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
307:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
308:debug:main No need to upgrade! gettext 0.19.1_0 >= gettext 0.19.1_0
309:debug:main epoch: in tree: 0 installed: 0
310:debug:main expat 2.1.0_0 exists in the ports tree
311:debug:main expat 2.1.0_0  is the latest installed
312:debug:main expat 2.1.0_0  is active
313:debug:main Merging existing variants '' into variants
314:debug:main new fully merged portvariants:
315:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat
316:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
317:debug:main adding the default universal variant
318:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
319:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
320:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
321:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
322:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
323:debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0
324:debug:main epoch: in tree: 0 installed: 0
325:debug:main ncurses 5.9_2 exists in the ports tree
326:debug:main ncurses 5.9_2  is the latest installed
327:debug:main ncurses 5.9_2  is active
328:debug:main Merging existing variants '' into variants
329:debug:main new fully merged portvariants:
330:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses
331:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
332:debug:main adding the default universal variant
333:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
334:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
335:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
336:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
337:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
338:debug:main No need to upgrade! ncurses 5.9_2 >= ncurses 5.9_2
339:debug:main epoch: in tree: 0 installed: 0
340:debug:main llvm_select 1.0_0 exists in the ports tree
341:debug:main llvm_select 1.0_0  is the latest installed
342:debug:main llvm_select 1.0_0  is active
343:debug:main Merging existing variants '' into variants
344:debug:main new fully merged portvariants:
345:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/llvm_select
346:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
347:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
348:debug:main universal_variant is false, so not adding the default universal variant
349:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
350:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
351:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
352:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
353:debug:main No need to upgrade! llvm_select 1.0_0 >= llvm_select 1.0_0
354:debug:main epoch: in tree: 0 installed: 0
355:debug:main cctools 855_1 exists in the ports tree
356:debug:main cctools 855_1 +llvm34 is the latest installed
357:debug:main cctools 855_1 +llvm34 is active
358:debug:main Merging existing variants '+llvm34' into variants
359:debug:main new fully merged portvariants: llvm34 +
360:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools
361:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
362:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
363:debug:main universal variant already exists, so not adding the default one
364:debug:main Executing variant llvm34 provides llvm34
365:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
366:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
367:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
368:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
369:debug:main No need to upgrade! cctools 855_1 >= cctools 855_1
370:debug:main epoch: in tree: 0 installed: 0
371:debug:main cctools-headers 855_0 exists in the ports tree
372:debug:main cctools-headers 855_0  is the latest installed
373:debug:main cctools-headers 855_0  is active
374:debug:main Merging existing variants '' into variants
375:debug:main new fully merged portvariants:
376:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools-headers
377:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
378:debug:main universal_variant is false, so not adding the default universal variant
379:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
380:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
381:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
382:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
383:debug:main No need to upgrade! cctools-headers 855_0 >= cctools-headers 855_0
384:debug:main epoch: in tree: 0 installed: 0
385:debug:main curl 7.37.0_0 exists in the ports tree
386:debug:main curl 7.37.0_0 +ssl is the latest installed
387:debug:main curl 7.37.0_0 +ssl is active
388:debug:main Merging existing variants '+ssl' into variants
389:debug:main new fully merged portvariants: ssl +
390:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl
391:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
392:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
393:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
394:debug:main universal variant already exists, so not adding the default one
395:debug:main Executing variant ssl provides ssl
396:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
397:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
398:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
399:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
400:debug:main No need to upgrade! curl 7.37.0_0 >= curl 7.37.0_0
401:debug:main epoch: in tree: 0 installed: 0
402:debug:main libidn 1.26_0 exists in the ports tree
403:debug:main libidn 1.26_0  is the latest installed
404:debug:main libidn 1.26_0  is active
405:debug:main Merging existing variants '' into variants
406:debug:main new fully merged portvariants:
407:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/mail/libidn
408:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
409:debug:main Sourcing PortGroup conflicts_build 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/conflicts_build-1.0.tcl
410:debug:main adding the default universal variant
411:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
412:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
413:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
414:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
415:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
416:debug:main No need to upgrade! libidn 1.26_0 >= libidn 1.26_0
417:debug:main epoch: in tree: 1 installed: 1
418:debug:main openssl 1.0.1h_0 exists in the ports tree
419:debug:main openssl 1.0.1h_0  is the latest installed
420:debug:main openssl 1.0.1h_0  is active
421:debug:main Merging existing variants '' into variants
422:debug:main new fully merged portvariants:
423:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl
424:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
425:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
426:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
427:debug:main universal variant already exists, so not adding the default one
428:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
429:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
430:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
431:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
432:debug:main No need to upgrade! openssl 1.0.1h_0 >= openssl 1.0.1h_0
433:debug:main epoch: in tree: 0 installed: 0
434:debug:main curl-ca-bundle 7.37.0_0 exists in the ports tree
435:debug:main curl-ca-bundle 7.37.0_0  is the latest installed
436:debug:main curl-ca-bundle 7.37.0_0  is active
437:debug:main Merging existing variants '' into variants
438:debug:main new fully merged portvariants:
439:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl
440:debug:main OS darwin/13.2.0 (Mac OS X 10.9) arch i386
441:debug:main universal_variant is false, so not adding the default universal variant
442:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
443:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
444:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
445:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
446:debug:main No need to upgrade! curl-ca-bundle 7.37.0_0 >= curl-ca-bundle 7.37.0_0
447:msg:main --->  Computing dependencies for netcdf:info:main .:debug:main netcdf has no conflicts
448:debug:main Searching for dependency: hdf5-18
449:debug:main Found Dependency: receipt exists for hdf5-18
450:debug:main Searching for dependency: hdf4
451:debug:main Found Dependency: receipt exists for hdf4
452:debug:main Searching for dependency: curl
453:debug:main Found Dependency: receipt exists for curl
454:msg:main
455:debug:main Executing org.macports.main (netcdf)
456:debug:main changing euid/egid - current euid: 0 - current egid: 0
457:debug:main egid changed to: 501
458:debug:main euid changed to: 504
459:debug:archivefetch archivefetch phase started at Thu Jun 12 16:43:28 MDT 2014
460:msg:archivefetch --->  Fetching archive for netcdf
461:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
462:debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: hdf5-18 hdf4 curl
463:debug:archivefetch Executing org.macports.archivefetch (netcdf)
464:debug:archivefetch euid/egid changed to: 0/0
465:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
466:debug:archivefetch euid/egid changed to: 504/501
467:info:archivefetch --->  netcdf-4.3.2_0+dap+hdf4+netcdf4.darwin_13.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
468:msg:archivefetch --->  Attempting to fetch netcdf-4.3.2_0+dap+hdf4+netcdf4.darwin_13.x86_64.tbz2 from http://packages.macports.org/netcdf
469:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
470:msg:archivefetch --->  Attempting to fetch netcdf-4.3.2_0+dap+hdf4+netcdf4.darwin_13.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/netcdf
471:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
472:msg:archivefetch --->  Attempting to fetch netcdf-4.3.2_0+dap+hdf4+netcdf4.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/netcdf
473:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
474:debug:archivefetch Privilege de-escalation not attempted as not running as root.
475:debug:fetch fetch phase started at Thu Jun 12 16:43:30 MDT 2014
476:notice:fetch --->  Fetching distfiles for netcdf
477:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
478:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
479:debug:fetch Executing proc-pre-org.macports.fetch-fetch-2
480:debug:fetch Executing org.macports.fetch (netcdf)
481:debug:fetch Privilege de-escalation not attempted as not running as root.
482:debug:checksum checksum phase started at Thu Jun 12 16:43:30 MDT 2014
483:notice:checksum --->  Verifying checksums for netcdf
484:debug:checksum Executing org.macports.checksum (netcdf)
485:info:checksum --->  Checksumming netcdf-c-4.3.2.tar.gz
486:debug:checksum Calculated (md5) is 59611c95fe65237cc45c870a0d423fee
487:debug:checksum Correct (md5) checksum for netcdf-c-4.3.2.tar.gz
488:debug:checksum Calculated (sha1) is 2a24a354059bad5b52dd1d61db4bcd36edd85d48
489:debug:checksum Correct (sha1) checksum for netcdf-c-4.3.2.tar.gz
490:debug:checksum Calculated (rmd160) is 61a1434ff1f2c8ddf2ad178bf3eb519f7ba1558d
491:debug:checksum Correct (rmd160) checksum for netcdf-c-4.3.2.tar.gz
492:debug:checksum Privilege de-escalation not attempted as not running as root.
493:debug:extract extract phase started at Thu Jun 12 16:43:30 MDT 2014
494:notice:extract --->  Extracting netcdf
495:debug:extract Executing org.macports.extract (netcdf)
496:info:extract --->  Extracting netcdf-c-4.3.2.tar.gz
497:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/netcdf/netcdf-c-4.3.2.tar.gz'
498:debug:extract Environment:
499CC_PRINT_OPTIONS='YES'
500CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/.CC_PRINT_OPTIONS'
501CPATH='/opt/local/include'
502LIBRARY_PATH='/opt/local/lib'
503MACOSX_DEPLOYMENT_TARGET='10.9'
504:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/netcdf/netcdf-c-4.3.2.tar.gz' | /usr/bin/tar -xf -'
505:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/netcdf/netcdf-c-4.3.2.tar.gz' | /usr/bin/tar -xf -
506:debug:extract euid/egid changed to: 0/0
507:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work to macports
508:debug:extract euid/egid changed to: 504/501
509:debug:extract Executing proc-post-org.macports.extract-extract-0
510:debug:extract Privilege de-escalation not attempted as not running as root.
511:debug:patch patch phase started at Thu Jun 12 16:43:35 MDT 2014
512:debug:patch Executing org.macports.patch (netcdf)
513:notice:patch --->  Applying patches to netcdf
514:info:patch --->  Applying patch-configure.diff
515:debug:patch Environment:
516CC_PRINT_OPTIONS='YES'
517CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/.CC_PRINT_OPTIONS'
518CPATH='/opt/local/include'
519LIBRARY_PATH='/opt/local/lib'
520MACOSX_DEPLOYMENT_TARGET='10.9'
521:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2" && /usr/bin/patch -p0'
522:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/netcdf/files/patch-configure.diff'
523:info:patch patching file configure
524:debug:patch Privilege de-escalation not attempted as not running as root.
525:debug:configure configure phase started at Thu Jun 12 16:43:36 MDT 2014
526:notice:configure --->  Configuring netcdf
527:debug:configure Using compiler 'Xcode Clang'
528:debug:configure Executing proc-pre-org.macports.configure-configure-0
529:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: hdf5-18 hdf4 curl
530:debug:configure Executing org.macports.configure (netcdf)
531:debug:configure Environment:
532CC='/usr/bin/clang'
533CC_PRINT_OPTIONS='YES'
534CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/.CC_PRINT_OPTIONS'
535CFLAGS='-pipe -Os -fno-common -arch x86_64'
536CPATH='/opt/local/include'
537CPPFLAGS='-I/opt/local/include -DNDEBUG'
538CXX='/usr/bin/clang++'
539CXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
540F77FLAGS='-m64'
541F90FLAGS='-pipe -Os -m64'
542FCFLAGS='-pipe -Os -m64'
543FFLAGS='-pipe -Os'
544INSTALL='/usr/bin/install -c'
545LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64'
546LIBRARY_PATH='/opt/local/lib'
547MACOSX_DEPLOYMENT_TARGET='10.9'
548OBJC='/usr/bin/clang'
549OBJCFLAGS='-pipe -Os -arch x86_64'
550OBJCXX='/usr/bin/clang++'
551OBJCXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
552:debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2" && ./configure --prefix=/opt/local --disable-doxygen --enable-netcdf-4 --enable-hdf4 --disable-hdf4-file-tests'
553:debug:configure Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2" && ./configure --prefix=/opt/local --disable-doxygen --enable-netcdf-4 --enable-hdf4 --disable-hdf4-file-tests
554:info:configure configure: netCDF 4.3.2
555:info:configure checking build system type... x86_64-apple-darwin13.2.0
556:info:configure checking host system type... x86_64-apple-darwin13.2.0
557:info:configure checking target system type... x86_64-apple-darwin13.2.0
558:info:configure checking for a BSD-compatible install... /usr/bin/install -c
559:info:configure checking whether build environment is sane... yes
560:info:configure checking for a thread-safe mkdir -p... ./install-sh -c -d
561:info:configure checking for gawk... no
562:info:configure checking for mawk... no
563:info:configure checking for nawk... no
564:info:configure checking for awk... awk
565:info:configure checking whether make sets $(MAKE)... yes
566:info:configure checking whether make supports nested variables... yes
567:info:configure checking whether to enable maintainer-specific portions of Makefiles... no
568:info:configure configure: checking user options
569:info:configure checking whether a win32 DLL is desired... no
570:info:configure checking whether a NCIO_MINBLOCKSIZE was specified... 256
571:info:configure checking if fsync support is enabled... no
572:info:configure checking if jna bug workaround is enabledd... no
573:info:configure checking whether extra valgrind tests should be run... no
574:info:configure checking whether we should try to build netCDF-4... yes
575:info:configure checking do we require hdf5 dynamic-loading support... xno
576:info:configure checking whether reading of HDF4 SD files is to be enabled... yes
577:info:configure checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget)... no
578:info:configure checking whether parallel I/O for classic and 64-bit offset files using parallel-netcdf is to be enabled... no
579:info:configure checking whether extra example tests should be run... no
580:info:configure checking whether parallel IO tests should be run... no
581:info:configure checking whether a default chunk size in bytes was specified... 4194304
582:info:configure checking whether a maximum per-variable cache size for HDF5 was specified... 67108864
583:info:configure checking whether a number of chunks for the default per-variable cache was specified... 10
584:info:configure checking whether a default file cache size for HDF5 was specified... 4194304
585:info:configure checking whether a default file cache maximum number of elements for HDF5 was specified... 1009
586:info:configure checking whether a default cache preemption for HDF5 was specified... 0.75
587:info:configure checking whether netCDF-4 logging is enabled... no
588:info:configure checking whether cdmremote client is to be built... no
589:info:configure checking whether DAP client is to be built... yes
590:info:configure checking for style of include used by make... GNU
591:info:configure checking for gcc... /usr/bin/clang
592:info:configure checking whether the C compiler works... yes
593:info:configure checking for C compiler default output file name... a.out
594:info:configure checking for suffix of executables...
595:info:configure checking whether we are cross compiling... no
596:info:configure checking for suffix of object files... o
597:info:configure checking whether we are using the GNU C compiler... yes
598:info:configure checking whether /usr/bin/clang accepts -g... yes
599:info:configure checking for /usr/bin/clang option to accept ISO C89... none needed
600:info:configure checking whether /usr/bin/clang understands -c and -o together... yes
601:info:configure checking dependency style of /usr/bin/clang... gcc3
602:info:configure checking for curl_easy_setopt in -lcurl... yes
603:info:configure checking for library containing curl_easy_setopt... -lcurl
604:info:configure checking whether dap remote testing should be enabled (default on)... yes
605:info:configure checking whether dap remote authorization testing should be enabled (default off)... no
606:info:configure checking whether netcdf4 group names should be enabled (default on)... yes
607:info:configure checking whether the time-consuming dap tests should be enabled (default off)... no
608:info:configure checking whether netCDF extra tests should be run (developers only)... no
609:info:configure checking whether FFIO will be used... no
610:info:configure checking whether examples should be built... yes
611:info:configure checking whether v2 netCDF API should be built... yes
612:info:configure checking whether the ncgen/ncdump/nccopy should be built... yes
613:info:configure checking whether test should be built and run... yes
614:info:configure checking whether large file (> 2GB) tests should be run... no
615:info:configure checking whether benchmaks should be run (experimental)... no
616:info:configure checking whether extreme numbers should be used in tests... yes
617:info:configure checking where to put large temp files if large file tests are run... .
618:info:configure configure: finding C compiler
619:info:configure checking for gcc... (cached) /usr/bin/clang
620:info:configure checking whether we are using the GNU C compiler... (cached) yes
621:info:configure checking whether /usr/bin/clang accepts -g... (cached) yes
622:info:configure checking for /usr/bin/clang option to accept ISO C89... (cached) none needed
623:info:configure checking whether /usr/bin/clang understands -c and -o together... (cached) yes
624:info:configure checking dependency style of /usr/bin/clang... (cached) gcc3
625:info:configure checking for an ANSI C-conforming const... yes
626:info:configure checking whether CURLOPT_USERNAME is defined... yes
627:info:configure checking whether CURLOPT_PASSWORD is defined... yes
628:info:configure checking whether CURLOPT_KEYPASSWD is defined... yes
629:info:configure checking whether CURLINFO_RESPONSE_CODE is defined... yes
630:info:configure configure: setting up libtool
631:info:configure checking how to print strings... printf
632:info:configure checking for a sed that does not truncate output... /usr/bin/sed
633:info:configure checking for grep that handles long lines and -e... /usr/bin/grep
634:info:configure checking for egrep... /usr/bin/grep -E
635:info:configure checking for fgrep... /usr/bin/grep -F
636:info:configure checking for ld used by /usr/bin/clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
637:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
638:info:configure checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm
639:info:configure checking the name lister (/opt/local/bin/nm) interface... BSD nm
640:info:configure checking whether ln -s works... yes
641:info:configure checking the maximum length of command line arguments... 196608
642:info:configure checking whether the shell understands some XSI constructs... yes
643:info:configure checking whether the shell understands "+="... yes
644:info:configure checking how to convert x86_64-apple-darwin13.2.0 file names to x86_64-apple-darwin13.2.0 format... func_convert_file_noop
645:info:configure checking how to convert x86_64-apple-darwin13.2.0 file names to toolchain format... func_convert_file_noop
646:info:configure checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
647:info:configure checking for objdump... no
648:info:configure checking how to recognize dependent libraries... pass_all
649:info:configure checking for dlltool... no
650:info:configure checking how to associate runtime and link libraries... printf %s\n
651:info:configure checking for ar... ar
652:info:configure checking for archiver @FILE support... no
653:info:configure checking for strip... strip
654:info:configure checking for ranlib... ranlib
655:info:configure checking command to parse /opt/local/bin/nm output from /usr/bin/clang object... ok
656:info:configure checking for sysroot... no
657:info:configure checking for mt... no
658:info:configure checking if : is a manifest tool... no
659:info:configure checking for dsymutil... dsymutil
660:info:configure checking for nmedit... nmedit
661:info:configure checking for lipo... lipo
662:info:configure checking for otool... otool
663:info:configure checking for otool64... no
664:info:configure checking for -single_module linker flag... yes
665:info:configure checking for -exported_symbols_list linker flag... yes
666:info:configure checking for -force_load linker flag... yes
667:info:configure checking how to run the C preprocessor... /usr/bin/clang -E
668:info:configure checking for ANSI C header files... yes
669:info:configure checking for sys/types.h... yes
670:info:configure checking for sys/stat.h... yes
671:info:configure checking for stdlib.h... yes
672:info:configure checking for string.h... yes
673:info:configure checking for memory.h... yes
674:info:configure checking for strings.h... yes
675:info:configure checking for inttypes.h... yes
676:info:configure checking for stdint.h... yes
677:info:configure checking for unistd.h... yes
678:info:configure checking for dlfcn.h... yes
679:info:configure checking for objdir... .libs
680:info:configure checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
681:info:configure checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
682:info:configure checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
683:info:configure checking if /usr/bin/clang static flag -static works... no
684:info:configure checking if /usr/bin/clang supports -c -o file.o... yes
685:info:configure checking if /usr/bin/clang supports -c -o file.o... (cached) yes
686:info:configure checking whether the /usr/bin/clang linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
687:info:configure checking dynamic linker characteristics... darwin13.2.0 dyld
688:info:configure checking how to hardcode library paths into programs... immediate
689:info:configure checking whether stripping libraries is possible... yes
690:info:configure checking if libtool supports shared libraries... yes
691:info:configure checking whether to build shared libraries... yes
692:info:configure checking whether to build static libraries... yes
693:info:configure configure: finding other utilities
694:info:configure checking for doxygen... no
695:info:configure configure: WARNING: Doxygen not found - documentation will not be built
696:info:configure checking for dot... no
697:info:configure configure: WARNING: dot not found - will use simple charts in documentation
698:info:configure checking for special C compiler options needed for large files... no
699:info:configure checking for _FILE_OFFSET_BITS value needed for large files... no
700:info:configure configure: displaying some results
701:info:configure checking CPPFLAGS... -I/opt/local/include -DNDEBUG
702:info:configure checking CC CFLAGS... /usr/bin/clang -pipe -Os -fno-common -arch x86_64
703:info:configure checking type /usr/bin/clang... /usr/bin/clang is /usr/bin/clang
704:info:configure checking CXX... /usr/bin/clang++
705:info:configure checking CXXFLAGS... -pipe -Os -arch x86_64 -stdlib=libc++
706:info:configure checking type /usr/bin/clang++... /usr/bin/clang++ is /usr/bin/clang++
707:info:configure checking FC... unset
708:info:configure checking F90... unset
709:info:configure checking AR... ar
710:info:configure checking AR_FLAGS... cru
711:info:configure checking type ar... ar is hashed (/opt/local/bin/ar)
712:info:configure checking NM... /opt/local/bin/nm
713:info:configure checking NMFLAGS...
714:info:configure configure: checking types, headers, and functions
715:info:configure checking for stdlib.h... (cached) yes
716:info:configure checking for sys/types.h... (cached) yes
717:info:configure checking sys/param.h usability... yes
718:info:configure checking sys/param.h presence... yes
719:info:configure checking for sys/param.h... yes
720:info:configure checking for dirent.h that defines DIR... yes
721:info:configure checking for library containing opendir... none required
722:info:configure checking for ANSI C header files... (cached) yes
723:info:configure checking for sys/wait.h that is POSIX.1 compatible... yes
724:info:configure checking whether time.h and sys/time.h may both be included... yes
725:info:configure checking locale.h usability... yes
726:info:configure checking locale.h presence... yes
727:info:configure checking for locale.h... yes
728:info:configure checking stdio.h usability... yes
729:info:configure checking stdio.h presence... yes
730:info:configure checking for stdio.h... yes
731:info:configure checking stdarg.h usability... yes
732:info:configure checking stdarg.h presence... yes
733:info:configure checking for stdarg.h... yes
734:info:configure checking errno.h usability... yes
735:info:configure checking errno.h presence... yes
736:info:configure checking for errno.h... yes
737:info:configure checking ctype.h usability... yes
738:info:configure checking ctype.h presence... yes
739:info:configure checking for ctype.h... yes
740:info:configure checking fcntl.h usability... yes
741:info:configure checking fcntl.h presence... yes
742:info:configure checking for fcntl.h... yes
743:info:configure checking malloc.h usability... no
744:info:configure checking malloc.h presence... no
745:info:configure checking for malloc.h... no
746:info:configure checking for stdlib.h... (cached) yes
747:info:configure checking for string.h... (cached) yes
748:info:configure checking for strings.h... (cached) yes
749:info:configure checking for unistd.h... (cached) yes
750:info:configure checking for sys/stat.h... (cached) yes
751:info:configure checking getopt.h usability... yes
752:info:configure checking getopt.h presence... yes
753:info:configure checking for getopt.h... yes
754:info:configure checking sys/time.h usability... yes
755:info:configure checking sys/time.h presence... yes
756:info:configure checking for sys/time.h... yes
757:info:configure checking for vprintf... yes
758:info:configure checking for _doprnt... no
759:info:configure checking sys/resource.h usability... yes
760:info:configure checking sys/resource.h presence... yes
761:info:configure checking for sys/resource.h... yes
762:info:configure checking for stdbool.h that conforms to C99... yes
763:info:configure checking for _Bool... yes
764:info:configure checking for strlcat... yes
765:info:configure checking for strerror... yes
766:info:configure checking for snprintf... yes
767:info:configure checking for strchr... yes
768:info:configure checking for strrchr... yes
769:info:configure checking for strcat... yes
770:info:configure checking for strcpy... yes
771:info:configure checking for strdup... yes
772:info:configure checking for strcasecmp... yes
773:info:configure checking for strtod... yes
774:info:configure checking for strtoll... yes
775:info:configure checking for strtoull... yes
776:info:configure checking for strstr... yes
777:info:configure checking for mkstemp... yes
778:info:configure checking for rand... yes
779:info:configure checking for memcmp... yes
780:info:configure checking for getrlimit... yes
781:info:configure checking for gettimeofday... yes
782:info:configure checking for fsync... yes
783:info:configure checking for MPI_Comm_f2c... no
784:info:configure checking whether in-memory files are enabled... configure: --enable-dap requires --enable-diskless
785:info:configure yes
786:info:configure checking for memmove... yes
787:info:configure checking for getpagesize... yes
788:info:configure checking for sysconf... yes
789:info:configure checking whether mmap is enabled for in-memory files... no
790:info:configure checking for stdlib.h... (cached) yes
791:info:configure checking for unistd.h... (cached) yes
792:info:configure checking for sys/param.h... (cached) yes
793:info:configure checking for getpagesize... (cached) yes
794:info:configure checking for working mmap... yes
795:info:configure checking for mremap... no
796:info:configure mmap function or mremap function is not available: disabling mmap
797:info:configure checking for size_t... yes
798:info:configure checking for working alloca.h... yes
799:info:configure checking for alloca... yes
800:info:configure checking whether isnan is declared... yes
801:info:configure checking whether isinf is declared... yes
802:info:configure checking whether isfinite is declared... yes
803:info:configure checking whether signbit is declared... yes
804:info:configure checking for struct stat.st_blksize... yes
805:info:configure checking for IEEE floating point format... yes
806:info:configure checking for size_t... (cached) yes
807:info:configure checking for off_t... yes
808:info:configure checking for ssize_t... yes
809:info:configure checking for ptrdiff_t... yes
810:info:configure checking for uchar... no
811:info:configure checking for longlong... no
812:info:configure checking whether char is unsigned... no
813:info:configure checking whether byte ordering is bigendian... no
814:info:configure checking size of short... 2
815:info:configure checking size of int... 4
816:info:configure checking size of long... 8
817:info:configure checking size of long long... 8
818:info:configure checking size of float... 4
819:info:configure checking size of double... 8
820:info:configure checking size of off_t... 8
821:info:configure checking size of size_t... 8
822:info:configure checking for library containing deflate... -lz
823:info:configure checking for floor in -lm... yes
824:info:configure checking for library containing H5Fflush... -lhdf5
825:info:configure checking for library containing H5DSis_scale... -lhdf5_hl
826:info:configure checking hdf5.h usability... yes
827:info:configure checking hdf5.h presence... yes
828:info:configure checking for hdf5.h... yes
829:info:configure checking for H5Pget_fapl_mpiposix... no
830:info:configure checking for H5Pget_fapl_mpio... no
831:info:configure checking for H5Pset_deflate... yes
832:info:configure checking for H5Z_SZIP... no
833:info:configure checking whether parallel I/O features are to be included... no
834:info:configure checking mfhdf.h usability... yes
835:info:configure checking mfhdf.h presence... yes
836:info:configure checking for mfhdf.h... yes
837:info:configure checking for Hclose in -ldf... no
838:info:configure configure: error: Can't find or link to the hdf4 df library. See config.log for errors.
839:info:configure Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2" && ./configure --prefix=/opt/local --disable-doxygen --enable-netcdf-4 --enable-hdf4 --disable-hdf4-file-tests
840:info:configure Exit code: 1
841:error:configure Failed to configure netcdf, consult /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/work/netcdf-c-4.3.2/config.log
842:error:configure org.macports.configure for port netcdf returned: configure failure: command execution failed
843:debug:configure Error code: NONE
844:debug:configure Backtrace: configure failure: command execution failed
845    while executing
846"portconfigure::configure_main org.macports.configure"
847    ("eval" body line 1)
848    invoked from within
849"eval $procedure $targetname"
850:info:configure Warning: targets not executed for netcdf: org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install
851:notice:configure Please see the log file for port netcdf for details:
852    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/main.log