Ticket #49867: buildports-mtln-x86_64-26188-main.log

--->  Extracting py27-bob-core
DEBUG: Executing org.macports.extract (py27-bob-core)
--->  Extracting bob.core-2.0.5.tar.gz
DEBUG: setting option extract.args to '/opt/local/var/macports/distfiles/py-bob-core/bob.core-2.0.5.tar.gz'
DEBUG: Environment: 
CC_PRINT_OPTIONS='YES'
CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/.CC_PRINT_OPTIONS'
CPATH='/opt/local/include'
LIBRARY_PATH='/opt/local/lib'
MACOSX_DEPLOYMENT_TARGET='10.8'
DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-bob-core/bob.core-2.0.5.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -'
DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-bob-core/bob.core-2.0.5.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - 
DEBUG: euid/egid changed to: 0/0
DEBUG: chowned /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work to macports
DEBUG: euid/egid changed to: 502/501
DEBUG: Executing proc-post-org.macports.extract-extract-0
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: patch phase started at Mon Nov 30 15:55:40 PST 2015
DEBUG: Executing org.macports.patch (py27-bob-core)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: configure phase started at Mon Nov 30 15:55:40 PST 2015
--->  Configuring py27-bob-core
DEBUG: Using compiler 'Xcode Clang'
DEBUG: Executing proc-pre-org.macports.configure-configure-0
DEBUG: Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: python27 blitz ffmpeg matio cmake jpeg netpbm libpng tiff giflib hdf5 fftw-3 vlfeat libsvm boost py27-sphinx py27-setuptools py27-numpy py27-matplotlib py27-sqlalchemy py27-scipy py27-nose py27-pillow py27-bob-blitz py27-bob-extension pkgconfig
DEBUG: Checking boost for active variants for depspec 'port:boost'
DEBUG: boost is installed with the following variants: +no_single+no_static+python27
DEBUG:   required: python27, forbidden: 
DEBUG:   accepted
DEBUG: Executing org.macports.configure (py27-bob-core)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: build phase started at Mon Nov 30 15:55:40 PST 2015
--->  Building py27-bob-core
DEBUG: Executing proc-pre-org.macports.build-build-0
DEBUG: Executing org.macports.build (py27-bob-core)
DEBUG: Environment: 
CC='/usr/bin/clang'
CC_PRINT_OPTIONS='YES'
CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/.CC_PRINT_OPTIONS'
CFLAGS='-arch x86_64'
CPATH='/opt/local/include'
CXX='/usr/bin/clang++'
CXXFLAGS='-arch x86_64'
F90FLAGS='-m64'
FCFLAGS='-m64'
FFLAGS='-m64'
LDFLAGS='-arch x86_64'
LIBRARY_PATH='/opt/local/lib'
MACOSX_DEPLOYMENT_TARGET='10.8'
OBJC='/usr/bin/clang'
OBJCFLAGS='-arch x86_64'
DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build'
DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build 
running build
running build_py
creating build
creating build/lib.macosx-10.8-x86_64-2.7
creating build/lib.macosx-10.8-x86_64-2.7/bob
copying bob/__init__.py -> build/lib.macosx-10.8-x86_64-2.7/bob
creating build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/__init__.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/log.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/test_convert.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/test_logging.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/test_random.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core
creating build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/__init__.py -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
running egg_info
creating bob.core.egg-info
writing requirements to bob.core.egg-info/requires.txt
writing bob.core.egg-info/PKG-INFO
writing top-level names to bob.core.egg-info/top_level.txt
writing dependency_links to bob.core.egg-info/dependency_links.txt
writing manifest file 'bob.core.egg-info/SOURCES.txt'
reading manifest file 'bob.core.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'bob.core.egg-info/SOURCES.txt'
copying bob/core/convert.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/logging.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core
copying bob/core/version.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core
creating build/lib.macosx-10.8-x86_64-2.7/bob/core/cpp
copying bob/core/cpp/logging.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/cpp
creating build/lib.macosx-10.8-x86_64-2.7/bob/core/include
creating build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/api.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_cat.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_convert.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_copy.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_index.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_random.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_repmat.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_reshape.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/array_sort.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/assert.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/cast.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/check.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/config.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/logging.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/random.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
copying bob/core/include/bob.core/random_api.h -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core
creating build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/README.txt -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/binomial_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/discrete_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/exponential_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/gamma_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/integer_log2.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/lognormal_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/normal_distribution.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/include/bob.core/boost/operators.hpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/include/bob.core/boost
copying bob/core/random/binomial.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/discrete.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/gamma.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/lognormal.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/main.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/mt19937.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/normal.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
copying bob/core/random/uniform.cpp -> build/lib.macosx-10.8-x86_64-2.7/bob/core/random
running build_ext
Re-run cmake no build system arguments
-- The C compiler identification is AppleClang 5.1.0.5030040
-- The CXX compiler identification is AppleClang 5.1.0.5030040
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done
-- Generating done
-- Build files have been written to: /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core
/opt/local/bin/cmake -H/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core -B/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core --check-build-system CMakeFiles/Makefile.cmake 0
/opt/local/bin/cmake -E cmake_progress_start /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make -f CMakeFiles/bob_core.dir/build.make CMakeFiles/bob_core.dir/depend
cd /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core && /opt/local/bin/cmake -E cmake_depends "Unix Makefiles" /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/bob_core.dir/DependInfo.cmake --color=
Dependee "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/bob_core.dir/DependInfo.cmake" is newer than depender "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/bob_core.dir/depend.internal".
Dependee "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/build/build_cmake/bob_core/CMakeFiles/bob_core.dir/depend.internal".
Scanning dependencies of target bob_core
make -f CMakeFiles/bob_core.dir/build.make CMakeFiles/bob_core.dir/build
[ 50%] Building CXX object CMakeFiles/bob_core.dir/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/cpp/logging.cpp.o
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++   -DBLITZ_VERSION=\"0.10\" -DHAVE_BLITZ=1 -DNO_IMPORT_ARRAY=1 -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPY_ARRAY_UNIQUE_SYMBOL=BOB_NUMPY_C_API -Dbob_core_EXPORTS -I/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/bob/blitz/include -isystem /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -isystem /opt/local/include  -std=c++0x -pedantic -Wall -pthread -Qunused-arguments -m64 -arch x86_64  -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.8.sdk -mmacosx-version-min=10.8 -fPIC   -o CMakeFiles/bob_core.dir/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/cpp/logging.cpp.o -c /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/cpp/logging.cpp
In file included from /opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/cpp/logging.cpp:30:
In file included from /opt/local/include/boost/thread/mutex.hpp:16:
In file included from /opt/local/include/boost/thread/pthread/mutex.hpp:16:
In file included from /opt/local/include/boost/thread/lock_types.hpp:11:
/opt/local/include/boost/thread/detail/move.hpp:31:10: fatal error: 'type_traits' file not found
#include <type_traits>
         ^
1 error generated.
make[2]: *** [CMakeFiles/bob_core.dir/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5/bob/core/cpp/logging.cpp.o] Error 1
make[1]: *** [CMakeFiles/bob_core.dir/all] Error 2
make: *** [all] Error 2
error: CMake compilation stopped with an error; stopping ...
Command failed:  cd "/opt/local/var/macports/build/_opt_mports_dports_python_py-bob-core/py27-bob-core/work/bob.core-2.0.5" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build 
Exit code: 1
Error: org.macports.build for port py27-bob-core returned: command execution failed
DEBUG: Error code: CHILDSTATUS 76396 1
DEBUG: Backtrace: command execution failed
    while executing
"system -nice 0 $fullcmdstring"
    ("eval" body line 1)
    invoked from within
"eval system $notty $nice \$fullcmdstring"
    invoked from within
"command_exec build"
    (procedure "portbuild::build_main" line 8)
    invoked from within
"portbuild::build_main org.macports.build"
    ("eval" body line 1)
    invoked from within
"eval $procedure $targetname"
Warning: targets not executed for py27-bob-core: org.macports.activate org.macports.build org.macports.destroot org.macports.install
Please see the log file for port py27-bob-core for details:
    /opt/local/var/macports/logs/_opt_mports_dports_python_py-bob-core/py27-bob-core/main.log
To report a bug, follow the instructions in the guide:
    http://guide.macports.org/#project.tickets
Error: Processing of port py27-bob-core failed
failure