Ticket #55045: main.log

File main.log, 28.3 KB (added by matt-hammond-bbc (Matt Hammond), 7 years ago)

py27-rpy2/main.log

Line 
1version:1
2:msg:clean --->  Computing dependencies for py27-rpy2:info:clean .:debug:clean py27-rpy2 has no conflicts
3:debug:clean Searching for dependency: py27-setuptools
4:debug:clean Found Dependency: receipt exists for py27-setuptools
5:debug:clean Searching for dependency: python27
6:debug:clean Found Dependency: receipt exists for python27
7:debug:clean Searching for dependency: R
8:debug:clean Found Dependency: receipt exists for R
9:debug:clean Searching for dependency: py27-six
10:debug:clean Found Dependency: receipt exists for py27-six
11:debug:clean Searching for dependency: py27-singledispatch
12:debug:clean Found Dependency: receipt exists for py27-singledispatch
13:debug:main Executing org.macports.main (py27-rpy2)
14:debug:main dropping privileges: euid changed to 501, egid changed to 20.
15:debug:archivefetch archivefetch phase started at Mon Sep 11 19:43:41 BST 2017
16:msg:archivefetch --->  Fetching archive for py27-rpy2
17:debug:archivefetch Executing org.macports.archivefetch (py27-rpy2)
18:debug:archivefetch euid/egid changed to: 0/0
19:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
20:debug:archivefetch euid/egid changed to: 501/20
21:info:archivefetch --->  py27-rpy2-2.9.0_0.darwin_16.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
22:msg:archivefetch --->  Attempting to fetch py27-rpy2-2.9.0_0.darwin_16.x86_64.tbz2 from https://packages.macports.org/py27-rpy2
23:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
24:msg:archivefetch --->  Attempting to fetch py27-rpy2-2.9.0_0.darwin_16.x86_64.tbz2 from http://fco.it.packages.macports.org/mirrors/macports-packages/py27-rpy2
25:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
26:msg:archivefetch --->  Attempting to fetch py27-rpy2-2.9.0_0.darwin_16.x86_64.tbz2 from http://her.gr.packages.macports.org/py27-rpy2
27:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
28:debug:archivefetch Privilege de-escalation not attempted as not running as root.
29:debug:fetch fetch phase started at Mon Sep 11 19:43:41 BST 2017
30:notice:fetch --->  Fetching distfiles for py27-rpy2
31:debug:fetch Executing org.macports.fetch (py27-rpy2)
32:info:fetch --->  rpy2-2.9.0.tar.gz does not exist in /opt/local/var/macports/distfiles/py-rpy2
33:notice:fetch --->  Attempting to fetch rpy2-2.9.0.tar.gz from https://pypi.python.org/packages/source/r/rpy2
34:debug:fetch Fetching distfile failed: The requested URL returned error: 404 Not Found
35:notice:fetch --->  Attempting to fetch rpy2-2.9.0.tar.gz from https://files.pythonhosted.org/packages/source/r/rpy2
36:debug:fetch Privilege de-escalation not attempted as not running as root.
37:debug:checksum checksum phase started at Mon Sep 11 19:43:44 BST 2017
38:notice:checksum --->  Verifying checksums for py27-rpy2
39:debug:checksum Executing org.macports.checksum (py27-rpy2)
40:info:checksum --->  Checksumming rpy2-2.9.0.tar.gz
41:debug:checksum Calculated (rmd160) is 94f55b341b47f2a29e785c72a0596ef6014b7cf2
42:debug:checksum Correct (rmd160) checksum for rpy2-2.9.0.tar.gz
43:debug:checksum Calculated (sha256) is d1e6c109093965f717293b6c3a8d22d9c172c3721b6a8360c84572dcb284112f
44:debug:checksum Correct (sha256) checksum for rpy2-2.9.0.tar.gz
45:debug:checksum Privilege de-escalation not attempted as not running as root.
46:debug:extract extract phase started at Mon Sep 11 19:43:44 BST 2017
47:notice:extract --->  Extracting py27-rpy2
48:debug:extract Executing org.macports.extract (py27-rpy2)
49:info:extract --->  Extracting rpy2-2.9.0.tar.gz
50:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/py-rpy2/rpy2-2.9.0.tar.gz'
51:debug:extract Environment:
52:debug:extract CC_PRINT_OPTIONS='YES'
53:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
54:debug:extract CPATH='/opt/local/include'
55:debug:extract LIBRARY_PATH='/opt/local/lib'
56:debug:extract MACOSX_DEPLOYMENT_TARGET='10.12'
57:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-rpy2/rpy2-2.9.0.tar.gz' | /usr/bin/tar -xf -
58:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-rpy2/rpy2-2.9.0.tar.gz' | /usr/bin/tar -xf -
59:debug:extract euid/egid changed to: 0/0
60:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work to macports
61:debug:extract euid/egid changed to: 501/20
62:debug:extract Privilege de-escalation not attempted as not running as root.
63:debug:patch patch phase started at Mon Sep 11 19:43:44 BST 2017
64:debug:patch Executing org.macports.patch (py27-rpy2)
65:debug:patch Privilege de-escalation not attempted as not running as root.
66:debug:configure configure phase started at Mon Sep 11 19:43:44 BST 2017
67:notice:configure --->  Configuring py27-rpy2
68:debug:configure Preferred compilers: clang macports-clang-3.9 macports-clang-3.8 macports-clang-3.7
69:debug:configure Using compiler 'Xcode Clang'
70:debug:configure Executing org.macports.configure (py27-rpy2)
71:debug:configure Privilege de-escalation not attempted as not running as root.
72:debug:build build phase started at Mon Sep 11 19:43:44 BST 2017
73:notice:build --->  Building py27-rpy2
74:debug:build Executing proc-pre-org.macports.build-build-0
75:debug:build Executing org.macports.build (py27-rpy2)
76:debug:build Environment:
77:debug:build CC='/usr/bin/clang'
78:debug:build CC_PRINT_OPTIONS='YES'
79:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
80:debug:build CFLAGS='-arch x86_64'
81:debug:build CPATH='/opt/local/include'
82:debug:build CXX='/usr/bin/clang++'
83:debug:build CXXFLAGS='-arch x86_64'
84:debug:build F90FLAGS='-m64'
85:debug:build FCFLAGS='-m64'
86:debug:build FFLAGS='-m64'
87:debug:build LDFLAGS='-arch x86_64'
88:debug:build LIBRARY_PATH='/opt/local/lib'
89:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
90:debug:build OBJC='/usr/bin/clang'
91:debug:build OBJCFLAGS='-arch x86_64'
92:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
93:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
94:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
95:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
96:info:build Exit code: 1
97:error:build Failed to build py27-rpy2: command execution failed
98:debug:build Error code: CHILDSTATUS 53281 1
99:debug:build Backtrace: command execution failed
100:debug:build     while executing
101:debug:build "system {*}$notty {*}$nice $fullcmdstring"
102:debug:build     invoked from within
103:debug:build "command_exec build"
104:debug:build     (procedure "portbuild::build_main" line 8)
105:debug:build     invoked from within
106:debug:build "$procedure $targetname"
107:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.
108version:1
109:msg:clean --->  Computing dependencies for py27-rpy2:info:clean .:debug:clean py27-rpy2 has no conflicts
110:debug:clean Searching for dependency: py27-setuptools
111:debug:clean Found Dependency: receipt exists for py27-setuptools
112:debug:clean Searching for dependency: python27
113:debug:clean Found Dependency: receipt exists for python27
114:debug:clean Searching for dependency: R
115:debug:clean Found Dependency: receipt exists for R
116:debug:clean Searching for dependency: py27-six
117:debug:clean Found Dependency: receipt exists for py27-six
118:debug:clean Searching for dependency: py27-singledispatch
119:debug:clean Found Dependency: receipt exists for py27-singledispatch
120:debug:main Executing org.macports.main (py27-rpy2)
121:debug:main dropping privileges: euid changed to 501, egid changed to 20.
122:debug:main Skipping completed org.macports.archivefetch (py27-rpy2)
123:debug:main Privilege de-escalation not attempted as not running as root.
124:debug:main Skipping completed org.macports.fetch (py27-rpy2)
125:debug:main Privilege de-escalation not attempted as not running as root.
126:debug:main Skipping completed org.macports.checksum (py27-rpy2)
127:debug:main Privilege de-escalation not attempted as not running as root.
128:debug:main Skipping completed org.macports.extract (py27-rpy2)
129:debug:main Privilege de-escalation not attempted as not running as root.
130:debug:main Skipping completed org.macports.patch (py27-rpy2)
131:debug:main Privilege de-escalation not attempted as not running as root.
132:debug:main Skipping completed org.macports.configure (py27-rpy2)
133:debug:main Privilege de-escalation not attempted as not running as root.
134:debug:build build phase started at Tue Oct  3 21:09:02 BST 2017
135:notice:build --->  Building py27-rpy2
136:debug:build Executing proc-pre-org.macports.build-build-0
137:debug:build Executing org.macports.build (py27-rpy2)
138:debug:build Environment:
139:debug:build CC='/usr/bin/clang'
140:debug:build CC_PRINT_OPTIONS='YES'
141:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
142:debug:build CFLAGS='-arch x86_64'
143:debug:build CPATH='/opt/local/include'
144:debug:build CXX='/usr/bin/clang++'
145:debug:build CXXFLAGS='-arch x86_64'
146:debug:build F90FLAGS='-m64'
147:debug:build FCFLAGS='-m64'
148:debug:build FFLAGS='-m64'
149:debug:build LDFLAGS='-arch x86_64'
150:debug:build LIBRARY_PATH='/opt/local/lib'
151:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
152:debug:build OBJC='/usr/bin/clang'
153:debug:build OBJCFLAGS='-arch x86_64'
154:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
155:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
156:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
157:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
158:info:build Exit code: 1
159:error:build Failed to build py27-rpy2: command execution failed
160:debug:build Error code: CHILDSTATUS 35363 1
161:debug:build Backtrace: command execution failed
162:debug:build     while executing
163:debug:build "system {*}$notty {*}$nice $fullcmdstring"
164:debug:build     invoked from within
165:debug:build "command_exec build"
166:debug:build     (procedure "portbuild::build_main" line 8)
167:debug:build     invoked from within
168:debug:build "$procedure $targetname"
169:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.
170version:1
171:msg:clean --->  Computing dependencies for py27-rpy2:info:clean .:debug:clean py27-rpy2 has no conflicts
172:debug:clean Searching for dependency: py27-setuptools
173:debug:clean Found Dependency: receipt exists for py27-setuptools
174:debug:clean Searching for dependency: python27
175:debug:clean Found Dependency: receipt exists for python27
176:debug:clean Searching for dependency: R
177:debug:clean Found Dependency: receipt exists for R
178:debug:clean Searching for dependency: py27-six
179:debug:clean Found Dependency: receipt exists for py27-six
180:debug:clean Searching for dependency: py27-singledispatch
181:debug:clean Found Dependency: receipt exists for py27-singledispatch
182:debug:main Executing org.macports.main (py27-rpy2)
183:debug:main dropping privileges: euid changed to 501, egid changed to 20.
184:debug:main Skipping completed org.macports.archivefetch (py27-rpy2)
185:debug:main Privilege de-escalation not attempted as not running as root.
186:debug:main Skipping completed org.macports.fetch (py27-rpy2)
187:debug:main Privilege de-escalation not attempted as not running as root.
188:debug:main Skipping completed org.macports.checksum (py27-rpy2)
189:debug:main Privilege de-escalation not attempted as not running as root.
190:debug:main Skipping completed org.macports.extract (py27-rpy2)
191:debug:main Privilege de-escalation not attempted as not running as root.
192:debug:main Skipping completed org.macports.patch (py27-rpy2)
193:debug:main Privilege de-escalation not attempted as not running as root.
194:debug:main Skipping completed org.macports.configure (py27-rpy2)
195:debug:main Privilege de-escalation not attempted as not running as root.
196:debug:build build phase started at Fri Oct  6 09:33:14 BST 2017
197:notice:build --->  Building py27-rpy2
198:debug:build Executing proc-pre-org.macports.build-build-0
199:debug:build Executing org.macports.build (py27-rpy2)
200:debug:build Environment:
201:debug:build CC='/usr/bin/clang'
202:debug:build CC_PRINT_OPTIONS='YES'
203:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
204:debug:build CFLAGS='-arch x86_64'
205:debug:build CPATH='/opt/local/include'
206:debug:build CXX='/usr/bin/clang++'
207:debug:build CXXFLAGS='-arch x86_64'
208:debug:build F90FLAGS='-m64'
209:debug:build FCFLAGS='-m64'
210:debug:build FFLAGS='-m64'
211:debug:build LDFLAGS='-arch x86_64'
212:debug:build LIBRARY_PATH='/opt/local/lib'
213:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
214:debug:build OBJC='/usr/bin/clang'
215:debug:build OBJCFLAGS='-arch x86_64'
216:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
217:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
218:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
219:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
220:info:build Exit code: 1
221:error:build Failed to build py27-rpy2: command execution failed
222:debug:build Error code: CHILDSTATUS 57015 1
223:debug:build Backtrace: command execution failed
224:debug:build     while executing
225:debug:build "system {*}$notty {*}$nice $fullcmdstring"
226:debug:build     invoked from within
227:debug:build "command_exec build"
228:debug:build     (procedure "portbuild::build_main" line 8)
229:debug:build     invoked from within
230:debug:build "$procedure $targetname"
231:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.
232version:1
233:msg:main --->  Computing dependencies for py27-rpy2:info:main .:debug:main py27-rpy2 has no conflicts
234:debug:main Searching for dependency: py27-setuptools
235:debug:main Found Dependency: receipt exists for py27-setuptools
236:debug:main Searching for dependency: python27
237:debug:main Found Dependency: receipt exists for python27
238:debug:main Searching for dependency: R
239:debug:main Found Dependency: receipt exists for R
240:debug:main Searching for dependency: py27-six
241:debug:main Found Dependency: receipt exists for py27-six
242:debug:main Searching for dependency: py27-singledispatch
243:debug:main Found Dependency: receipt exists for py27-singledispatch
244:debug:main Executing org.macports.main (py27-rpy2)
245:debug:main dropping privileges: euid changed to 501, egid changed to 20.
246:debug:main Skipping completed org.macports.archivefetch (py27-rpy2)
247:debug:main Privilege de-escalation not attempted as not running as root.
248:debug:main Skipping completed org.macports.fetch (py27-rpy2)
249:debug:main Privilege de-escalation not attempted as not running as root.
250:debug:main Skipping completed org.macports.checksum (py27-rpy2)
251:debug:main Privilege de-escalation not attempted as not running as root.
252:debug:main Skipping completed org.macports.extract (py27-rpy2)
253:debug:main Privilege de-escalation not attempted as not running as root.
254:debug:main Skipping completed org.macports.patch (py27-rpy2)
255:debug:main Privilege de-escalation not attempted as not running as root.
256:debug:main Skipping completed org.macports.configure (py27-rpy2)
257:debug:main Privilege de-escalation not attempted as not running as root.
258:debug:build build phase started at Sun Oct  8 13:22:49 BST 2017
259:notice:build --->  Building py27-rpy2
260:debug:build Executing proc-pre-org.macports.build-build-0
261:debug:build Executing org.macports.build (py27-rpy2)
262:debug:build Environment:
263:debug:build CC='/usr/bin/clang'
264:debug:build CC_PRINT_OPTIONS='YES'
265:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
266:debug:build CFLAGS='-arch x86_64'
267:debug:build CPATH='/opt/local/include'
268:debug:build CXX='/usr/bin/clang++'
269:debug:build CXXFLAGS='-arch x86_64'
270:debug:build F90FLAGS='-m64'
271:debug:build FCFLAGS='-m64'
272:debug:build FFLAGS='-m64'
273:debug:build LDFLAGS='-arch x86_64'
274:debug:build LIBRARY_PATH='/opt/local/lib'
275:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
276:debug:build OBJC='/usr/bin/clang'
277:debug:build OBJCFLAGS='-arch x86_64'
278:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
279:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
280:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
281:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
282:info:build Exit code: 1
283:error:build Failed to build py27-rpy2: command execution failed
284:debug:build Error code: CHILDSTATUS 6691 1
285:debug:build Backtrace: command execution failed
286:debug:build     while executing
287:debug:build "system {*}$notty {*}$nice $fullcmdstring"
288:debug:build     invoked from within
289:debug:build "command_exec build"
290:debug:build     (procedure "portbuild::build_main" line 8)
291:debug:build     invoked from within
292:debug:build "$procedure $targetname"
293:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.
294version:1
295:msg:main --->  Computing dependencies for py27-rpy2:info:main .:debug:main py27-rpy2 has no conflicts
296:debug:main Searching for dependency: py27-setuptools
297:debug:main Found Dependency: receipt exists for py27-setuptools
298:debug:main Searching for dependency: python27
299:debug:main Found Dependency: receipt exists for python27
300:debug:main Searching for dependency: R
301:debug:main Found Dependency: receipt exists for R
302:debug:main Searching for dependency: py27-six
303:debug:main Found Dependency: receipt exists for py27-six
304:debug:main Searching for dependency: py27-singledispatch
305:debug:main Found Dependency: receipt exists for py27-singledispatch
306:debug:main Executing org.macports.main (py27-rpy2)
307:debug:main dropping privileges: euid changed to 501, egid changed to 20.
308:debug:main Skipping completed org.macports.archivefetch (py27-rpy2)
309:debug:main Privilege de-escalation not attempted as not running as root.
310:debug:main Skipping completed org.macports.fetch (py27-rpy2)
311:debug:main Privilege de-escalation not attempted as not running as root.
312:debug:main Skipping completed org.macports.checksum (py27-rpy2)
313:debug:main Privilege de-escalation not attempted as not running as root.
314:debug:main Skipping completed org.macports.extract (py27-rpy2)
315:debug:main Privilege de-escalation not attempted as not running as root.
316:debug:main Skipping completed org.macports.patch (py27-rpy2)
317:debug:main Privilege de-escalation not attempted as not running as root.
318:debug:main Skipping completed org.macports.configure (py27-rpy2)
319:debug:main Privilege de-escalation not attempted as not running as root.
320:debug:build build phase started at Sun Oct  8 13:24:01 BST 2017
321:notice:build --->  Building py27-rpy2
322:debug:build Executing proc-pre-org.macports.build-build-0
323:debug:build Executing org.macports.build (py27-rpy2)
324:debug:build Environment:
325:debug:build CC='/usr/bin/clang'
326:debug:build CC_PRINT_OPTIONS='YES'
327:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
328:debug:build CFLAGS='-arch x86_64'
329:debug:build CPATH='/opt/local/include'
330:debug:build CXX='/usr/bin/clang++'
331:debug:build CXXFLAGS='-arch x86_64'
332:debug:build F90FLAGS='-m64'
333:debug:build FCFLAGS='-m64'
334:debug:build FFLAGS='-m64'
335:debug:build LDFLAGS='-arch x86_64'
336:debug:build LIBRARY_PATH='/opt/local/lib'
337:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
338:debug:build OBJC='/usr/bin/clang'
339:debug:build OBJCFLAGS='-arch x86_64'
340:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
341:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
342:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
343:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
344:info:build Exit code: 1
345:error:build Failed to build py27-rpy2: command execution failed
346:debug:build Error code: CHILDSTATUS 6730 1
347:debug:build Backtrace: command execution failed
348:debug:build     while executing
349:debug:build "system {*}$notty {*}$nice $fullcmdstring"
350:debug:build     invoked from within
351:debug:build "command_exec build"
352:debug:build     (procedure "portbuild::build_main" line 8)
353:debug:build     invoked from within
354:debug:build "$procedure $targetname"
355:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.
356version:1
357:msg:clean --->  Computing dependencies for py27-rpy2:info:clean .:debug:clean py27-rpy2 has no conflicts
358:debug:clean Searching for dependency: py27-setuptools
359:debug:clean Found Dependency: receipt exists for py27-setuptools
360:debug:clean Searching for dependency: python27
361:debug:clean Found Dependency: receipt exists for python27
362:debug:clean Searching for dependency: R
363:debug:clean Found Dependency: receipt exists for R
364:debug:clean Searching for dependency: py27-six
365:debug:clean Found Dependency: receipt exists for py27-six
366:debug:clean Searching for dependency: py27-singledispatch
367:debug:clean Found Dependency: receipt exists for py27-singledispatch
368:debug:main Executing org.macports.main (py27-rpy2)
369:debug:main dropping privileges: euid changed to 501, egid changed to 20.
370:debug:main Skipping completed org.macports.archivefetch (py27-rpy2)
371:debug:main Privilege de-escalation not attempted as not running as root.
372:debug:main Skipping completed org.macports.fetch (py27-rpy2)
373:debug:main Privilege de-escalation not attempted as not running as root.
374:debug:main Skipping completed org.macports.checksum (py27-rpy2)
375:debug:main Privilege de-escalation not attempted as not running as root.
376:debug:main Skipping completed org.macports.extract (py27-rpy2)
377:debug:main Privilege de-escalation not attempted as not running as root.
378:debug:main Skipping completed org.macports.patch (py27-rpy2)
379:debug:main Privilege de-escalation not attempted as not running as root.
380:debug:main Skipping completed org.macports.configure (py27-rpy2)
381:debug:main Privilege de-escalation not attempted as not running as root.
382:debug:build build phase started at Mon Oct  9 11:01:23 BST 2017
383:notice:build --->  Building py27-rpy2
384:debug:build Executing proc-pre-org.macports.build-build-0
385:debug:build Executing org.macports.build (py27-rpy2)
386:debug:build Environment:
387:debug:build CC='/usr/bin/clang'
388:debug:build CC_PRINT_OPTIONS='YES'
389:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/.CC_PRINT_OPTIONS'
390:debug:build CFLAGS='-arch x86_64'
391:debug:build CPATH='/opt/local/include'
392:debug:build CXX='/usr/bin/clang++'
393:debug:build CXXFLAGS='-arch x86_64'
394:debug:build F90FLAGS='-m64'
395:debug:build FCFLAGS='-m64'
396:debug:build FFLAGS='-m64'
397:debug:build LDFLAGS='-arch x86_64'
398:debug:build LIBRARY_PATH='/opt/local/lib'
399:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
400:debug:build OBJC='/usr/bin/clang'
401:debug:build OBJCFLAGS='-arch x86_64'
402:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
403:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
404:info:build rpy2 is no longer supporting Python < 3. Consider using an older rpy2 release when using an older Python release.
405:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/work/rpy2-2.9.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg build
406:info:build Exit code: 1
407:error:build Failed to build py27-rpy2: command execution failed
408:debug:build Error code: CHILDSTATUS 50998 1
409:debug:build Backtrace: command execution failed
410:debug:build     while executing
411:debug:build "system {*}$notty {*}$nice $fullcmdstring"
412:debug:build     invoked from within
413:debug:build "command_exec build"
414:debug:build     (procedure "portbuild::build_main" line 8)
415:debug:build     invoked from within
416:debug:build "$procedure $targetname"
417:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-rpy2/py27-rpy2/main.log for details.