Ticket #55076: memsuite-test-fail.log

File memsuite-test-fail.log, 478.5 KB (added by kencu (Ken), 7 years ago)
Line 
1version:1
2:debug:main epoch: in tree: 0 installed: 0
3:debug:main ghostscript 9.22_0 exists in the ports tree
4:debug:main ghostscript 9.22_0 +x11 is the latest installed
5:debug:main ghostscript 9.22_0 +x11 is active
6:debug:main Merging existing variants '+x11' into variants
7:debug:main new fully merged portvariants: x11 +
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/ghostscript
9:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
10:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
11:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
12:debug:main universal variant already exists, so not adding the default one
13:debug:main Executing variant x11 provides x11
14:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
15:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
16:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
17:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
18:debug:main No need to upgrade! ghostscript 9.22_0 >= ghostscript 9.22_0
19:debug:main epoch: in tree: 0 installed: 0
20:debug:main expat 2.2.4_0 exists in the ports tree
21:debug:main expat 2.2.4_0  is the latest installed
22:debug:main expat 2.2.4_0  is active
23:debug:main Merging existing variants '' into variants
24:debug:main new fully merged portvariants:
25:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat
26:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
27:debug:main adding the default universal variant
28:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
29:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
30:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
31:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
32:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
33:debug:main No need to upgrade! expat 2.2.4_0 >= expat 2.2.4_0
34:debug:main epoch: in tree: 0 installed: 0
35:debug:main fontconfig 2.12.6_1 exists in the ports tree
36:debug:main fontconfig 2.12.6_1  is the latest installed
37:debug:main fontconfig 2.12.6_1  is active
38:debug:main Merging existing variants '' into variants
39:debug:main new fully merged portvariants:
40:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/fontconfig
41:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
42:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
43:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
44:debug:main universal variant already exists, so not adding the default one
45:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
46:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
47:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
48:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
49:debug:main No need to upgrade! fontconfig 2.12.6_1 >= fontconfig 2.12.6_1
50:debug:main epoch: in tree: 0 installed: 0
51:debug:main libiconv 1.15_0 exists in the ports tree
52:debug:main libiconv 1.15_0  is the latest installed
53:debug:main libiconv 1.15_0  is active
54:debug:main Merging existing variants '' into variants
55:debug:main new fully merged portvariants:
56:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv
57:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
58:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
59:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
60:debug:main universal variant already exists, so not adding the default one
61:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
62:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
63:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
64:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
65:debug:main No need to upgrade! libiconv 1.15_0 >= libiconv 1.15_0
66:debug:main epoch: in tree: 0 installed: 0
67:debug:main freetype 2.8_0 exists in the ports tree
68:debug:main freetype 2.8_0  is the latest installed
69:debug:main freetype 2.8_0  is active
70:debug:main Merging existing variants '' into variants
71:debug:main new fully merged portvariants:
72:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/freetype
73:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
74:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
75:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
76:debug:main universal variant already exists, so not adding the default one
77:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
78:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
79:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
80:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
81:debug:main No need to upgrade! freetype 2.8_0 >= freetype 2.8_0
82:debug:main epoch: in tree: 0 installed: 0
83:debug:main bzip2 1.0.6_0 exists in the ports tree
84:debug:main bzip2 1.0.6_0  is the latest installed
85:debug:main bzip2 1.0.6_0  is active
86:debug:main Merging existing variants '' into variants
87:debug:main new fully merged portvariants:
88:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2
89:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
90:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
91:debug:main universal variant already exists, so not adding the default one
92:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
93:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
94:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
95:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
96:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
97:debug:main epoch: in tree: 0 installed: 0
98:debug:main libpng 1.6.32_0 exists in the ports tree
99:debug:main libpng 1.6.32_0  is the latest installed
100:debug:main libpng 1.6.32_0  is active
101:debug:main Merging existing variants '' into variants
102:debug:main new fully merged portvariants:
103:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/libpng
104:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
105:debug:main adding the default universal variant
106:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
107:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
108:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
109:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
110:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
111:debug:main No need to upgrade! libpng 1.6.32_0 >= libpng 1.6.32_0
112:debug:main epoch: in tree: 0 installed: 0
113:debug:main zlib 1.2.11_0 exists in the ports tree
114:debug:main zlib 1.2.11_0  is the latest installed
115:debug:main zlib 1.2.11_0  is active
116:debug:main Merging existing variants '' into variants
117:debug:main new fully merged portvariants:
118:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib
119:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
120:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
121:debug:main adding the default universal variant
122:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
123:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
124:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
125:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
126:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
127:debug:main No need to upgrade! zlib 1.2.11_0 >= zlib 1.2.11_0
128:debug:main epoch: in tree: 0 installed: 0
129:debug:main jbig2dec 0.14_0 exists in the ports tree
130:debug:main jbig2dec 0.14_0  is the latest installed
131:debug:main jbig2dec 0.14_0  is active
132:debug:main Merging existing variants '' into variants
133:debug:main new fully merged portvariants:
134:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jbig2dec
135:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
136:debug:main adding the default universal variant
137:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
138:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
139:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
140:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
141:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
142:debug:main No need to upgrade! jbig2dec 0.14_0 >= jbig2dec 0.14_0
143:debug:main epoch: in tree: 0 installed: 0
144:debug:main jpeg 9b_0 exists in the ports tree
145:debug:main jpeg 9b_0  is the latest installed
146:debug:main jpeg 9b_0  is active
147:debug:main Merging existing variants '' into variants
148:debug:main new fully merged portvariants:
149:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/jpeg
150:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
151:debug:main adding the default universal variant
152:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
153:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
154:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
155:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
156:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
157:debug:main No need to upgrade! jpeg 9b_0 >= jpeg 9b_0
158:debug:main epoch: in tree: 0 installed: 0
159:debug:main libidn 1.33_0 exists in the ports tree
160:debug:main libidn 1.33_0  is the latest installed
161:debug:main libidn 1.33_0  is active
162:debug:main Merging existing variants '' into variants
163:debug:main new fully merged portvariants:
164:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/mail/libidn
165:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
166:debug:main adding the default universal variant
167:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
168:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
169:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
170:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
171:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
172:debug:main No need to upgrade! libidn 1.33_0 >= libidn 1.33_0
173:debug:main epoch: in tree: 2 installed: 2
174:debug:main gettext 0.19.8.1_0 exists in the ports tree
175:debug:main gettext 0.19.8.1_0  is the latest installed
176:debug:main gettext 0.19.8.1_0  is active
177:debug:main Merging existing variants '' into variants
178:debug:main new fully merged portvariants:
179:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext
180:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
181:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
182:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
183:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
184:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang < 211.10.1}
185:debug:main universal variant already exists, so not adding the default one
186:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
187:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
188:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
189:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
190:debug:main No need to upgrade! gettext 0.19.8.1_0 >= gettext 0.19.8.1_0
191:debug:main epoch: in tree: 0 installed: 0
192:debug:main ncurses 6.0-20170916_0 exists in the ports tree
193:debug:main ncurses 6.0-20170916_0  is the latest installed
194:debug:main ncurses 6.0-20170916_0  is active
195:debug:main Merging existing variants '' into variants
196:debug:main new fully merged portvariants:
197:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses
198:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
199:debug:main adding the default universal variant
200:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
201:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
202:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
203:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
204:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
205:debug:main No need to upgrade! ncurses 6.0-20170916_0 >= ncurses 6.0-20170916_0
206:debug:main epoch: in tree: 0 installed: 0
207:debug:main libpaper 1.1.24.5_0 exists in the ports tree
208:debug:main libpaper 1.1.24.5_0  is the latest installed
209:debug:main libpaper 1.1.24.5_0  is active
210:debug:main Merging existing variants '' into variants
211:debug:main new fully merged portvariants:
212:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/libpaper
213:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
214:debug:main adding the default universal variant
215:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
216:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
217:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
218:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
219:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
220:debug:main No need to upgrade! libpaper 1.1.24.5_0 >= libpaper 1.1.24.5_0
221:debug:main epoch: in tree: 0 installed: 0
222:debug:main tiff 4.0.8_0 exists in the ports tree
223:debug:main tiff 4.0.8_0  is the latest installed
224:debug:main tiff 4.0.8_0  is active
225:debug:main Merging existing variants '' into variants
226:debug:main new fully merged portvariants:
227:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/tiff
228:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
229:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
230:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
231:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
232:debug:main universal variant already exists, so not adding the default one
233:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
234:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
235:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
236:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
237:debug:main No need to upgrade! tiff 4.0.8_0 >= tiff 4.0.8_0
238:debug:main epoch: in tree: 0 installed: 0
239:debug:main xz 5.2.3_0 exists in the ports tree
240:debug:main xz 5.2.3_0  is the latest installed
241:debug:main xz 5.2.3_0  is active
242:debug:main Merging existing variants '' into variants
243:debug:main new fully merged portvariants:
244:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/xz
245:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
246:debug:main adding the default universal variant
247:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
248:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
249:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
250:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
251:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
252:debug:main No need to upgrade! xz 5.2.3_0 >= xz 5.2.3_0
253:debug:main epoch: in tree: 0 installed: 0
254:debug:main lcms2 2.8_0 exists in the ports tree
255:debug:main lcms2 2.8_0  is the latest installed
256:debug:main lcms2 2.8_0  is active
257:debug:main Merging existing variants '' into variants
258:debug:main new fully merged portvariants:
259:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/lcms2
260:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
261:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
262:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
263:debug:main universal variant already exists, so not adding the default one
264:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
265:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
266:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
267:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
268:debug:main No need to upgrade! lcms2 2.8_0 >= lcms2 2.8_0
269:debug:main epoch: in tree: 0 installed: 0
270:debug:main xorg-libXext 1.3.3_0 exists in the ports tree
271:debug:main xorg-libXext 1.3.3_0  is the latest installed
272:debug:main xorg-libXext 1.3.3_0  is active
273:debug:main Merging existing variants '' into variants
274:debug:main new fully merged portvariants:
275:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXext
276:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
277:debug:main adding the default universal variant
278:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
279:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
280:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
281:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
282:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
283:debug:main No need to upgrade! xorg-libXext 1.3.3_0 >= xorg-libXext 1.3.3_0
284:debug:main epoch: in tree: 0 installed: 0
285:debug:main xorg-libX11 1.6.5_0 exists in the ports tree
286:debug:main xorg-libX11 1.6.5_0  is the latest installed
287:debug:main xorg-libX11 1.6.5_0  is active
288:debug:main Merging existing variants '' into variants
289:debug:main new fully merged portvariants:
290:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libX11
291:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
292:debug:main adding the default universal variant
293:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
294:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
295:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
296:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
297:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
298:debug:main No need to upgrade! xorg-libX11 1.6.5_0 >= xorg-libX11 1.6.5_0
299:debug:main epoch: in tree: 0 installed: 0
300:debug:main xorg-libXdmcp 1.1.2_0 exists in the ports tree
301:debug:main xorg-libXdmcp 1.1.2_0  is the latest installed
302:debug:main xorg-libXdmcp 1.1.2_0  is active
303:debug:main Merging existing variants '' into variants
304:debug:main new fully merged portvariants:
305:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXdmcp
306:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
307:debug:main adding the default universal variant
308:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
309:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
310:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
311:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
312:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
313:debug:main No need to upgrade! xorg-libXdmcp 1.1.2_0 >= xorg-libXdmcp 1.1.2_0
314:debug:main epoch: in tree: 0 installed: 0
315:debug:main xorg-libXau 1.0.8_0 exists in the ports tree
316:debug:main xorg-libXau 1.0.8_0  is the latest installed
317:debug:main xorg-libXau 1.0.8_0  is active
318:debug:main Merging existing variants '' into variants
319:debug:main new fully merged portvariants:
320:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXau
321:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
322:debug:main adding the default universal variant
323:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
324:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
325:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
326:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
327:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
328:debug:main No need to upgrade! xorg-libXau 1.0.8_0 >= xorg-libXau 1.0.8_0
329:debug:main epoch: in tree: 0 installed: 0
330:debug:main xorg-xproto 7.0.31_0 exists in the ports tree
331:debug:main xorg-xproto 7.0.31_0  is the latest installed
332:debug:main xorg-xproto 7.0.31_0  is active
333:debug:main Merging existing variants '' into variants
334:debug:main new fully merged portvariants:
335:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xproto
336:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
337:debug:main only one arch supported, so not adding the default universal variant
338:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
339:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
340:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
341:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
342:debug:main No need to upgrade! xorg-xproto 7.0.31_0 >= xorg-xproto 7.0.31_0
343:debug:main epoch: in tree: 0 installed: 0
344:debug:main xorg-libxcb 1.12_2 exists in the ports tree
345:debug:main xorg-libxcb 1.12_2 +python27 is the latest installed
346:debug:main xorg-libxcb 1.12_2 +python27 is active
347:debug:main Merging existing variants '+python27' into variants
348:debug:main new fully merged portvariants: python27 +
349:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libxcb
350:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
351:debug:main adding the default universal variant
352:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
353:debug:main Executing variant python27 provides python27
354:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
355:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
356:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
357:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
358:debug:main No need to upgrade! xorg-libxcb 1.12_2 >= xorg-libxcb 1.12_2
359:debug:main epoch: in tree: 0 installed: 0
360:debug:main xorg-xcb-proto 1.12_1 exists in the ports tree
361:debug:main xorg-xcb-proto 1.12_1 +python27 is the latest installed
362:debug:main xorg-xcb-proto 1.12_1 +python27 is active
363:debug:main Merging existing variants '+python27' into variants
364:debug:main new fully merged portvariants: python27 +
365:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xcb-proto
366:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
367:debug:main only one arch supported, so not adding the default universal variant
368:debug:main Executing variant python27 provides python27
369:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
370:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
371:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
372:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
373:debug:main No need to upgrade! xorg-xcb-proto 1.12_1 >= xorg-xcb-proto 1.12_1
374:debug:main epoch: in tree: 2 installed: 2
375:debug:main python27 2.7.14_0 exists in the ports tree
376:debug:main python27 2.7.14_0  is the latest installed
377:debug:main python27 2.7.14_0  is active
378:debug:main Merging existing variants '' into variants
379:debug:main new fully merged portvariants:
380:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27
381:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
382:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
383:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
384:debug:main universal variant already exists, so not adding the default one
385:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
386:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
387:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
388:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
389:debug:main No need to upgrade! python27 2.7.14_0 >= python27 2.7.14_0
390:debug:main epoch: in tree: 0 installed: 0
391:debug:main db48 4.8.30_4 exists in the ports tree
392:debug:main db48 4.8.30_4  is the latest installed
393:debug:main db48 4.8.30_4  is active
394:debug:main Merging existing variants '' into variants
395:debug:main new fully merged portvariants:
396:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db48
397:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
398:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
399:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
400:debug:main universal variant already exists, so not adding the default one
401:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
402:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
403:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
404:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
405:debug:main No need to upgrade! db48 4.8.30_4 >= db48 4.8.30_4
406:debug:main epoch: in tree: 20090923 installed: 20090923
407:debug:main libedit 20170329-3.1_2 exists in the ports tree
408:debug:main libedit 20170329-3.1_2  is the latest installed
409:debug:main libedit 20170329-3.1_2  is active
410:debug:main Merging existing variants '' into variants
411:debug:main new fully merged portvariants:
412:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit
413:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
414:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
415:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
416:debug:main universal variant already exists, so not adding the default one
417:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
418:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
419:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
420:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
421:debug:main No need to upgrade! libedit 20170329-3.1_2 >= libedit 20170329-3.1_2
422:debug:main epoch: in tree: 0 installed: 0
423:debug:main libffi 3.2.1_0 exists in the ports tree
424:debug:main libffi 3.2.1_0  is the latest installed
425:debug:main libffi 3.2.1_0  is active
426:debug:main Merging existing variants '' into variants
427:debug:main new fully merged portvariants:
428:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libffi
429:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
430:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
431:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
432:debug:main universal variant already exists, so not adding the default one
433:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
434:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
435:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
436:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
437:debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0
438:debug:main epoch: in tree: 1 installed: 1
439:debug:main openssl 1.0.2l_0 exists in the ports tree
440:debug:main openssl 1.0.2l_0  is the latest installed
441:debug:main openssl 1.0.2l_0  is active
442:debug:main Merging existing variants '' into variants
443:debug:main new fully merged portvariants:
444:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl
445:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
446:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
447:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
448:debug:main universal variant already exists, so not adding the default one
449:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
450:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
451:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
452:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
453:debug:main No need to upgrade! openssl 1.0.2l_0 >= openssl 1.0.2l_0
454:debug:main epoch: in tree: 0 installed: 0
455:debug:main sqlite3 3.20.1_0 exists in the ports tree
456:debug:main sqlite3 3.20.1_0  is the latest installed
457:debug:main sqlite3 3.20.1_0  is active
458:debug:main Merging existing variants '' into variants
459:debug:main new fully merged portvariants:
460:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3
461:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
462:debug:main adding the default universal variant
463:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
464:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
465:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
466:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
467:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
468:debug:main No need to upgrade! sqlite3 3.20.1_0 >= sqlite3 3.20.1_0
469:debug:main epoch: in tree: 0 installed: 0
470:debug:main python_select 0.3_7 exists in the ports tree
471:debug:main python_select 0.3_7  is the latest installed
472:debug:main python_select 0.3_7  is active
473:debug:main Merging existing variants '' into variants
474:debug:main new fully merged portvariants:
475:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select
476:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
477:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
478:debug:main universal_variant is false, so not adding the default universal variant
479:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
480:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
481:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
482:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
483:debug:main No need to upgrade! python_select 0.3_7 >= python_select 0.3_7
484:debug:main epoch: in tree: 0 installed: 0
485:debug:main python2_select 0.0_2 exists in the ports tree
486:debug:main python2_select 0.0_2  is the latest installed
487:debug:main python2_select 0.0_2  is active
488:debug:main Merging existing variants '' into variants
489:debug:main new fully merged portvariants:
490:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python2_select
491:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
492:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
493:debug:main universal_variant is false, so not adding the default universal variant
494:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
495:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
496:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
497:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
498:debug:main No need to upgrade! python2_select 0.0_2 >= python2_select 0.0_2
499:debug:main epoch: in tree: 0 installed: 0
500:debug:main libxml2 2.9.6_0 exists in the ports tree
501:debug:main libxml2 2.9.6_0  is the latest installed
502:debug:main libxml2 2.9.6_0  is active
503:debug:main Merging existing variants '' into variants
504:debug:main new fully merged portvariants:
505:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxml2
506:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
507:debug:main adding the default universal variant
508:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
509:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
510:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
511:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
512:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
513:debug:main No need to upgrade! libxml2 2.9.6_0 >= libxml2 2.9.6_0
514:debug:main epoch: in tree: 0 installed: 0
515:debug:main xorg-libpthread-stubs 0.3_0 exists in the ports tree
516:debug:main xorg-libpthread-stubs 0.3_0  is the latest installed
517:debug:main xorg-libpthread-stubs 0.3_0  is active
518:debug:main Merging existing variants '' into variants
519:debug:main new fully merged portvariants:
520:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libpthread-stubs
521:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
522:debug:main only one arch supported, so not adding the default universal variant
523:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
524:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
525:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
526:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
527:debug:main No need to upgrade! xorg-libpthread-stubs 0.3_0 >= xorg-libpthread-stubs 0.3_0
528:debug:main epoch: in tree: 0 installed: 0
529:debug:main xorg-kbproto 1.0.7_0 exists in the ports tree
530:debug:main xorg-kbproto 1.0.7_0  is the latest installed
531:debug:main xorg-kbproto 1.0.7_0  is active
532:debug:main Merging existing variants '' into variants
533:debug:main new fully merged portvariants:
534:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-kbproto
535:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
536:debug:main only one arch supported, so not adding the default universal variant
537:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
538:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
539:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
540:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
541:debug:main No need to upgrade! xorg-kbproto 1.0.7_0 >= xorg-kbproto 1.0.7_0
542:debug:main epoch: in tree: 0 installed: 0
543:debug:main xorg-xextproto 7.3.0_0 exists in the ports tree
544:debug:main xorg-xextproto 7.3.0_0  is the latest installed
545:debug:main xorg-xextproto 7.3.0_0  is active
546:debug:main Merging existing variants '' into variants
547:debug:main new fully merged portvariants:
548:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xextproto
549:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
550:debug:main only one arch supported, so not adding the default universal variant
551:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
552:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
553:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
554:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
555:debug:main No need to upgrade! xorg-xextproto 7.3.0_0 >= xorg-xextproto 7.3.0_0
556:debug:main epoch: in tree: 0 installed: 0
557:debug:main xorg-libXt 1.1.5_1 exists in the ports tree
558:debug:main xorg-libXt 1.1.5_1  is the latest installed
559:debug:main xorg-libXt 1.1.5_1  is active
560:debug:main Merging existing variants '' into variants
561:debug:main new fully merged portvariants:
562:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXt
563:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
564:debug:main adding the default universal variant
565:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
566:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
567:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
568:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
569:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
570:debug:main No need to upgrade! xorg-libXt 1.1.5_1 >= xorg-libXt 1.1.5_1
571:debug:main epoch: in tree: 0 installed: 0
572:debug:main xorg-libsm 1.2.2_0 exists in the ports tree
573:debug:main xorg-libsm 1.2.2_0  is the latest installed
574:debug:main xorg-libsm 1.2.2_0  is active
575:debug:main Merging existing variants '' into variants
576:debug:main new fully merged portvariants:
577:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libsm
578:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
579:debug:main adding the default universal variant
580:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
581:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
582:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
583:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
584:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
585:debug:main No need to upgrade! xorg-libsm 1.2.2_0 >= xorg-libsm 1.2.2_0
586:debug:main epoch: in tree: 0 installed: 0
587:debug:main xorg-libice 1.0.9_0 exists in the ports tree
588:debug:main xorg-libice 1.0.9_0  is the latest installed
589:debug:main xorg-libice 1.0.9_0  is active
590:debug:main Merging existing variants '' into variants
591:debug:main new fully merged portvariants:
592:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libice
593:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
594:debug:main adding the default universal variant
595:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
596:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
597:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
598:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
599:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
600:debug:main No need to upgrade! xorg-libice 1.0.9_0 >= xorg-libice 1.0.9_0
601:debug:main epoch: in tree: 0 installed: 0
602:debug:main perl5 5.24.2_0 exists in the ports tree
603:debug:main perl5 5.24.2_0 +perl5_24 is the latest installed
604:debug:main perl5 5.24.2_0 +perl5_24 is active
605:debug:main Merging existing variants '+perl5_24' into variants
606:debug:main new fully merged portvariants: perl5_24 +
607:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
608:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
609:debug:main Re-registering default for configure.universal_args
610:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
611:debug:main universal_variant is false, so not adding the default universal variant
612:debug:main Executing variant perl5_24 provides perl5_24
613:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
614:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
615:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
616:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
617:debug:main No need to upgrade! perl5 5.24.2_0 >= perl5 5.24.2_0
618:debug:main epoch: in tree: 0 installed: 0
619:debug:main perl5.24 5.24.2_0 exists in the ports tree
620:debug:main perl5.24 5.24.2_0  is the latest installed
621:debug:main perl5.24 5.24.2_0  is active
622:debug:main Merging existing variants '' into variants
623:debug:main new fully merged portvariants:
624:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
625:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
626:debug:main Re-registering default for configure.universal_args
627:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
628:debug:main adding the default universal variant
629:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
630:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
631:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
632:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
633:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
634:debug:main No need to upgrade! perl5.24 5.24.2_0 >= perl5.24 5.24.2_0
635:debug:main epoch: in tree: 0 installed: 0
636:debug:main gdbm 1.13_3 exists in the ports tree
637:debug:main gdbm 1.13_3  is the latest installed
638:debug:main gdbm 1.13_3  is active
639:debug:main Merging existing variants '' into variants
640:debug:main new fully merged portvariants:
641:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm
642:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
643:debug:main adding the default universal variant
644:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
645:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
646:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
647:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
648:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
649:debug:main No need to upgrade! gdbm 1.13_3 >= gdbm 1.13_3
650:debug:main epoch: in tree: 0 installed: 0
651:debug:main readline 7.0.003_1 exists in the ports tree
652:debug:main readline 7.0.003_1  is the latest installed
653:debug:main readline 7.0.003_1  is active
654:debug:main Merging existing variants '' into variants
655:debug:main new fully merged portvariants:
656:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/readline
657:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
658:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
659:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
660:debug:main universal variant already exists, so not adding the default one
661:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
662:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
663:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
664:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
665:debug:main No need to upgrade! readline 7.0.003_1 >= readline 7.0.003_1
666:debug:main epoch: in tree: 0 installed: 0
667:debug:main libxslt 1.1.29_1 exists in the ports tree
668:debug:main libxslt 1.1.29_1  is the latest installed
669:debug:main libxslt 1.1.29_1  is active
670:debug:main Merging existing variants '' into variants
671:debug:main new fully merged portvariants:
672:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxslt
673:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
674:debug:main adding the default universal variant
675:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
676:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
677:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
678:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
679:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
680:debug:main No need to upgrade! libxslt 1.1.29_1 >= libxslt 1.1.29_1
681:debug:main epoch: in tree: 0 installed: 0
682:debug:main p5.24-file-which 1.220.0_0 exists in the ports tree
683:debug:main p5.24-file-which 1.220.0_0  is the latest installed
684:debug:main p5.24-file-which 1.220.0_0  is active
685:debug:main Merging existing variants '' into variants
686:debug:main new fully merged portvariants:
687:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-file-which
688:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
689:debug:main Re-registering default for configure.universal_args
690:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
691:debug:main Re-registering default for livecheck.version
692:debug:main only one arch supported, so not adding the default universal variant
693:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
694:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
695:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
696:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
697:debug:main No need to upgrade! p5.24-file-which 1.220.0_0 >= p5.24-file-which 1.220.0_0
698:debug:main epoch: in tree: 0 installed: 0
699:debug:main p5.24-html-template 2.970.0_0 exists in the ports tree
700:debug:main p5.24-html-template 2.970.0_0  is the latest installed
701:debug:main p5.24-html-template 2.970.0_0  is active
702:debug:main Merging existing variants '' into variants
703:debug:main new fully merged portvariants:
704:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-html-template
705:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
706:debug:main Re-registering default for configure.universal_args
707:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
708:debug:main Re-registering default for livecheck.version
709:debug:main only one arch supported, so not adding the default universal variant
710:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
711:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
712:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
713:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
714:debug:main No need to upgrade! p5.24-html-template 2.970.0_0 >= p5.24-html-template 2.970.0_0
715:debug:main epoch: in tree: 0 installed: 0
716:debug:main p5.24-cgi 4.360.0_0 exists in the ports tree
717:debug:main p5.24-cgi 4.360.0_0  is the latest installed
718:debug:main p5.24-cgi 4.360.0_0  is active
719:debug:main Merging existing variants '' into variants
720:debug:main new fully merged portvariants:
721:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-cgi
722:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
723:debug:main Re-registering default for configure.universal_args
724:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
725:debug:main Re-registering default for livecheck.version
726:debug:main only one arch supported, so not adding the default universal variant
727:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
728:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
729:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
730:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
731:debug:main No need to upgrade! p5.24-cgi 4.360.0_0 >= p5.24-cgi 4.360.0_0
732:debug:main epoch: in tree: 0 installed: 0
733:debug:main p5.24-html-parser 3.720.0_0 exists in the ports tree
734:debug:main p5.24-html-parser 3.720.0_0  is the latest installed
735:debug:main p5.24-html-parser 3.720.0_0  is active
736:debug:main Merging existing variants '' into variants
737:debug:main new fully merged portvariants:
738:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-html-parser
739:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
740:debug:main Re-registering default for configure.universal_args
741:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
742:debug:main Re-registering default for livecheck.version
743:debug:main adding the default universal variant
744:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
745:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
746:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
747:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
748:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
749:debug:main No need to upgrade! p5.24-html-parser 3.720.0_0 >= p5.24-html-parser 3.720.0_0
750:debug:main epoch: in tree: 0 installed: 0
751:debug:main p5.24-html-tagset 3.200.0_4 exists in the ports tree
752:debug:main p5.24-html-tagset 3.200.0_4  is the latest installed
753:debug:main p5.24-html-tagset 3.200.0_4  is active
754:debug:main Merging existing variants '' into variants
755:debug:main new fully merged portvariants:
756:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-html-tagset
757:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
758:debug:main Re-registering default for configure.universal_args
759:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
760:debug:main Re-registering default for livecheck.version
761:debug:main only one arch supported, so not adding the default universal variant
762:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
763:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
764:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
765:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
766:debug:main No need to upgrade! p5.24-html-tagset 3.200.0_4 >= p5.24-html-tagset 3.200.0_4
767:debug:main epoch: in tree: 1 installed: 1
768:debug:main p5.24-html-tree 5.60.0_0 exists in the ports tree
769:debug:main p5.24-html-tree 5.60.0_0  is the latest installed
770:debug:main p5.24-html-tree 5.60.0_0  is active
771:debug:main Merging existing variants '' into variants
772:debug:main new fully merged portvariants:
773:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-html-tree
774:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
775:debug:main Re-registering default for configure.universal_args
776:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
777:debug:main Re-registering default for livecheck.version
778:debug:main Re-registering default for configure.args
779:debug:main only one arch supported, so not adding the default universal variant
780:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
781:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
782:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
783:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
784:debug:main No need to upgrade! p5.24-html-tree 5.60.0_0 >= p5.24-html-tree 5.60.0_0
785:debug:main epoch: in tree: 2 installed: 2
786:debug:main p5.24-module-build 0.422.400_0 exists in the ports tree
787:debug:main p5.24-module-build 0.422.400_0  is the latest installed
788:debug:main p5.24-module-build 0.422.400_0  is active
789:debug:main Merging existing variants '' into variants
790:debug:main new fully merged portvariants:
791:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-module-build
792:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
793:debug:main Re-registering default for configure.universal_args
794:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
795:debug:main Re-registering default for livecheck.version
796:debug:main Re-registering default for configure.args
797:debug:main only one arch supported, so not adding the default universal variant
798:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
799:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
800:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
801:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
802:debug:main No need to upgrade! p5.24-module-build 0.422.400_0 >= p5.24-module-build 0.422.400_0
803:debug:main epoch: in tree: 0 installed: 0
804:debug:main p5.24-cpan-meta 2.150.10_0 exists in the ports tree
805:debug:main p5.24-cpan-meta 2.150.10_0  is the latest installed
806:debug:main p5.24-cpan-meta 2.150.10_0  is active
807:debug:main Merging existing variants '' into variants
808:debug:main new fully merged portvariants:
809:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-cpan-meta
810:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
811:debug:main Re-registering default for configure.universal_args
812:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
813:debug:main Re-registering default for livecheck.version
814:debug:main only one arch supported, so not adding the default universal variant
815:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
816:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
817:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
818:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
819:debug:main No need to upgrade! p5.24-cpan-meta 2.150.10_0 >= p5.24-cpan-meta 2.150.10_0
820:debug:main epoch: in tree: 0 installed: 0
821:debug:main p5.24-cpan-meta-requirements 2.140.0_0 exists in the ports tree
822:debug:main p5.24-cpan-meta-requirements 2.140.0_0  is the latest installed
823:debug:main p5.24-cpan-meta-requirements 2.140.0_0  is active
824:debug:main Merging existing variants '' into variants
825:debug:main new fully merged portvariants:
826:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-cpan-meta-requirements
827:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
828:debug:main Re-registering default for configure.universal_args
829:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
830:debug:main Re-registering default for livecheck.version
831:debug:main only one arch supported, so not adding the default universal variant
832:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
833:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
834:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
835:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
836:debug:main No need to upgrade! p5.24-cpan-meta-requirements 2.140.0_0 >= p5.24-cpan-meta-requirements 2.140.0_0
837:debug:main epoch: in tree: 0 installed: 0
838:debug:main p5.24-cpan-meta-yaml 0.18.0_0 exists in the ports tree
839:debug:main p5.24-cpan-meta-yaml 0.18.0_0  is the latest installed
840:debug:main p5.24-cpan-meta-yaml 0.18.0_0  is active
841:debug:main Merging existing variants '' into variants
842:debug:main new fully merged portvariants:
843:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-cpan-meta-yaml
844:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
845:debug:main Re-registering default for configure.universal_args
846:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
847:debug:main Re-registering default for livecheck.version
848:debug:main only one arch supported, so not adding the default universal variant
849:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
850:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
851:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
852:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
853:debug:main No need to upgrade! p5.24-cpan-meta-yaml 0.18.0_0 >= p5.24-cpan-meta-yaml 0.18.0_0
854:debug:main epoch: in tree: 0 installed: 0
855:debug:main p5.24-encode 2.930.0_0 exists in the ports tree
856:debug:main p5.24-encode 2.930.0_0  is the latest installed
857:debug:main p5.24-encode 2.930.0_0  is active
858:debug:main Merging existing variants '' into variants
859:debug:main new fully merged portvariants:
860:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-encode
861:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
862:debug:main Re-registering default for configure.universal_args
863:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
864:debug:main Re-registering default for livecheck.version
865:debug:main adding the default universal variant
866:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
867:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
868:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
869:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
870:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
871:debug:main No need to upgrade! p5.24-encode 2.930.0_0 >= p5.24-encode 2.930.0_0
872:debug:main epoch: in tree: 0 installed: 0
873:debug:main p5.24-scalar-list-utils 1.490.0_0 exists in the ports tree
874:debug:main p5.24-scalar-list-utils 1.490.0_0  is the latest installed
875:debug:main p5.24-scalar-list-utils 1.490.0_0  is active
876:debug:main Merging existing variants '' into variants
877:debug:main new fully merged portvariants:
878:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-scalar-list-utils
879:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
880:debug:main Re-registering default for configure.universal_args
881:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
882:debug:main Re-registering default for livecheck.version
883:debug:main adding the default universal variant
884:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
885:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
886:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
887:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
888:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
889:debug:main No need to upgrade! p5.24-scalar-list-utils 1.490.0_0 >= p5.24-scalar-list-utils 1.490.0_0
890:debug:main epoch: in tree: 2 installed: 2
891:debug:main p5.24-version 0.991.800_0 exists in the ports tree
892:debug:main p5.24-version 0.991.800_0  is the latest installed
893:debug:main p5.24-version 0.991.800_0  is active
894:debug:main Merging existing variants '' into variants
895:debug:main new fully merged portvariants:
896:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-version
897:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
898:debug:main Re-registering default for configure.universal_args
899:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
900:debug:main Re-registering default for livecheck.version
901:debug:main adding the default universal variant
902:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
903:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
904:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
905:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
906:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
907:debug:main No need to upgrade! p5.24-version 0.991.800_0 >= p5.24-version 0.991.800_0
908:debug:main epoch: in tree: 0 installed: 0
909:debug:main p5.24-inc-latest 0.500.0_0 exists in the ports tree
910:debug:main p5.24-inc-latest 0.500.0_0  is the latest installed
911:debug:main p5.24-inc-latest 0.500.0_0  is active
912:debug:main Merging existing variants '' into variants
913:debug:main new fully merged portvariants:
914:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-inc-latest
915:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
916:debug:main Re-registering default for configure.universal_args
917:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
918:debug:main Re-registering default for livecheck.version
919:debug:main only one arch supported, so not adding the default universal variant
920:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
921:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
922:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
923:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
924:debug:main No need to upgrade! p5.24-inc-latest 0.500.0_0 >= p5.24-inc-latest 0.500.0_0
925:debug:main epoch: in tree: 0 installed: 0
926:debug:main p5.24-module-metadata 1.0.33_0 exists in the ports tree
927:debug:main p5.24-module-metadata 1.0.33_0  is the latest installed
928:debug:main p5.24-module-metadata 1.0.33_0  is active
929:debug:main Merging existing variants '' into variants
930:debug:main new fully merged portvariants:
931:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-module-metadata
932:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
933:debug:main Re-registering default for configure.universal_args
934:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
935:debug:main Re-registering default for livecheck.version
936:debug:main only one arch supported, so not adding the default universal variant
937:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
938:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
939:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
940:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
941:debug:main No need to upgrade! p5.24-module-metadata 1.0.33_0 >= p5.24-module-metadata 1.0.33_0
942:debug:main epoch: in tree: 0 installed: 0
943:debug:main p5.24-perl-ostype 1.10.0_0 exists in the ports tree
944:debug:main p5.24-perl-ostype 1.10.0_0  is the latest installed
945:debug:main p5.24-perl-ostype 1.10.0_0  is active
946:debug:main Merging existing variants '' into variants
947:debug:main new fully merged portvariants:
948:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-perl-ostype
949:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
950:debug:main Re-registering default for configure.universal_args
951:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
952:debug:main Re-registering default for livecheck.version
953:debug:main only one arch supported, so not adding the default universal variant
954:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
955:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
956:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
957:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
958:debug:main No need to upgrade! p5.24-perl-ostype 1.10.0_0 >= p5.24-perl-ostype 1.10.0_0
959:debug:main epoch: in tree: 0 installed: 0
960:debug:main p5.24-podlators 4.90.0_0 exists in the ports tree
961:debug:main p5.24-podlators 4.90.0_0  is the latest installed
962:debug:main p5.24-podlators 4.90.0_0  is active
963:debug:main Merging existing variants '' into variants
964:debug:main new fully merged portvariants:
965:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-podlators
966:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
967:debug:main Re-registering default for configure.universal_args
968:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
969:debug:main Re-registering default for livecheck.version
970:debug:main only one arch supported, so not adding the default universal variant
971:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
972:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
973:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
974:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
975:debug:main No need to upgrade! p5.24-podlators 4.90.0_0 >= p5.24-podlators 4.90.0_0
976:debug:main epoch: in tree: 0 installed: 0
977:debug:main p5.24-pod-simple 3.350.0_0 exists in the ports tree
978:debug:main p5.24-pod-simple 3.350.0_0  is the latest installed
979:debug:main p5.24-pod-simple 3.350.0_0  is active
980:debug:main Merging existing variants '' into variants
981:debug:main new fully merged portvariants:
982:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-pod-simple
983:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
984:debug:main Re-registering default for configure.universal_args
985:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
986:debug:main Re-registering default for livecheck.version
987:debug:main only one arch supported, so not adding the default universal variant
988:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
989:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
990:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
991:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
992:debug:main No need to upgrade! p5.24-pod-simple 3.350.0_0 >= p5.24-pod-simple 3.350.0_0
993:debug:main epoch: in tree: 0 installed: 0
994:debug:main p5.24-pod-escapes 1.70.0_0 exists in the ports tree
995:debug:main p5.24-pod-escapes 1.70.0_0  is the latest installed
996:debug:main p5.24-pod-escapes 1.70.0_0  is active
997:debug:main Merging existing variants '' into variants
998:debug:main new fully merged portvariants:
999:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-pod-escapes
1000:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1001:debug:main Re-registering default for configure.universal_args
1002:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1003:debug:main Re-registering default for livecheck.version
1004:debug:main only one arch supported, so not adding the default universal variant
1005:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1006:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1007:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1008:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1009:debug:main No need to upgrade! p5.24-pod-escapes 1.70.0_0 >= p5.24-pod-escapes 1.70.0_0
1010:debug:main epoch: in tree: 0 installed: 0
1011:debug:main p5.24-test-exception 0.430.0_0 exists in the ports tree
1012:debug:main p5.24-test-exception 0.430.0_0  is the latest installed
1013:debug:main p5.24-test-exception 0.430.0_0  is active
1014:debug:main Merging existing variants '' into variants
1015:debug:main new fully merged portvariants:
1016:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-test-exception
1017:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1018:debug:main Re-registering default for configure.universal_args
1019:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1020:debug:main Re-registering default for livecheck.version
1021:debug:main only one arch supported, so not adding the default universal variant
1022:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1023:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1024:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1025:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1026:debug:main No need to upgrade! p5.24-test-exception 0.430.0_0 >= p5.24-test-exception 0.430.0_0
1027:debug:main epoch: in tree: 1 installed: 1
1028:debug:main p5.24-sub-uplevel 0.280.0_0 exists in the ports tree
1029:debug:main p5.24-sub-uplevel 0.280.0_0  is the latest installed
1030:debug:main p5.24-sub-uplevel 0.280.0_0  is active
1031:debug:main Merging existing variants '' into variants
1032:debug:main new fully merged portvariants:
1033:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-sub-uplevel
1034:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1035:debug:main Re-registering default for configure.universal_args
1036:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1037:debug:main Re-registering default for livecheck.version
1038:debug:main only one arch supported, so not adding the default universal variant
1039:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1040:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1041:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1042:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1043:debug:main No need to upgrade! p5.24-sub-uplevel 0.280.0_0 >= p5.24-sub-uplevel 0.280.0_0
1044:debug:main epoch: in tree: 0 installed: 0
1045:debug:main p5.24-test-fatal 0.14.0_0 exists in the ports tree
1046:debug:main p5.24-test-fatal 0.14.0_0  is the latest installed
1047:debug:main p5.24-test-fatal 0.14.0_0  is active
1048:debug:main Merging existing variants '' into variants
1049:debug:main new fully merged portvariants:
1050:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-test-fatal
1051:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1052:debug:main Re-registering default for configure.universal_args
1053:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1054:debug:main Re-registering default for livecheck.version
1055:debug:main only one arch supported, so not adding the default universal variant
1056:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1057:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1058:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1059:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1060:debug:main No need to upgrade! p5.24-test-fatal 0.14.0_0 >= p5.24-test-fatal 0.14.0_0
1061:debug:main epoch: in tree: 0 installed: 0
1062:debug:main p5.24-try-tiny 0.280.0_0 exists in the ports tree
1063:debug:main p5.24-try-tiny 0.280.0_0  is the latest installed
1064:debug:main p5.24-try-tiny 0.280.0_0  is active
1065:debug:main Merging existing variants '' into variants
1066:debug:main new fully merged portvariants:
1067:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-try-tiny
1068:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1069:debug:main Re-registering default for configure.universal_args
1070:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1071:debug:main Re-registering default for livecheck.version
1072:debug:main only one arch supported, so not adding the default universal variant
1073:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1074:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1075:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1076:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1077:debug:main No need to upgrade! p5.24-try-tiny 0.280.0_0 >= p5.24-try-tiny 0.280.0_0
1078:debug:main epoch: in tree: 0 installed: 0
1079:debug:main p5.24-sub-name 0.210.0_0 exists in the ports tree
1080:debug:main p5.24-sub-name 0.210.0_0  is the latest installed
1081:debug:main p5.24-sub-name 0.210.0_0  is active
1082:debug:main Merging existing variants '' into variants
1083:debug:main new fully merged portvariants:
1084:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-sub-name
1085:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1086:debug:main Re-registering default for configure.universal_args
1087:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1088:debug:main Re-registering default for livecheck.version
1089:debug:main adding the default universal variant
1090:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1091:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1092:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1093:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1094:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1095:debug:main No need to upgrade! p5.24-sub-name 0.210.0_0 >= p5.24-sub-name 0.210.0_0
1096:debug:main epoch: in tree: 0 installed: 0
1097:debug:main p5.24-json 2.940.0_0 exists in the ports tree
1098:debug:main p5.24-json 2.940.0_0  is the latest installed
1099:debug:main p5.24-json 2.940.0_0  is active
1100:debug:main Merging existing variants '' into variants
1101:debug:main new fully merged portvariants:
1102:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-json
1103:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1104:debug:main Re-registering default for configure.universal_args
1105:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1106:debug:main Re-registering default for livecheck.version
1107:debug:main only one arch supported, so not adding the default universal variant
1108:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1109:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1110:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1111:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1112:debug:main No need to upgrade! p5.24-json 2.940.0_0 >= p5.24-json 2.940.0_0
1113:debug:main epoch: in tree: 1 installed: 1
1114:debug:main p5.24-json-xs 3.40.0_0 exists in the ports tree
1115:debug:main p5.24-json-xs 3.40.0_0  is the latest installed
1116:debug:main p5.24-json-xs 3.40.0_0  is active
1117:debug:main Merging existing variants '' into variants
1118:debug:main new fully merged portvariants:
1119:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-json-xs
1120:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1121:debug:main Re-registering default for configure.universal_args
1122:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1123:debug:main Re-registering default for livecheck.version
1124:debug:main adding the default universal variant
1125:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1126:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1127:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1128:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1129:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1130:debug:main No need to upgrade! p5.24-json-xs 3.40.0_0 >= p5.24-json-xs 3.40.0_0
1131:debug:main epoch: in tree: 0 installed: 0
1132:debug:main p5.24-common-sense 3.740.0_0 exists in the ports tree
1133:debug:main p5.24-common-sense 3.740.0_0  is the latest installed
1134:debug:main p5.24-common-sense 3.740.0_0  is active
1135:debug:main Merging existing variants '' into variants
1136:debug:main new fully merged portvariants:
1137:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-common-sense
1138:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1139:debug:main Re-registering default for configure.universal_args
1140:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1141:debug:main Re-registering default for livecheck.version
1142:debug:main only one arch supported, so not adding the default universal variant
1143:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1144:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1145:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1146:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1147:debug:main No need to upgrade! p5.24-common-sense 3.740.0_0 >= p5.24-common-sense 3.740.0_0
1148:debug:main epoch: in tree: 0 installed: 0
1149:debug:main p5.24-types-serialiser 1.0.0_0 exists in the ports tree
1150:debug:main p5.24-types-serialiser 1.0.0_0  is the latest installed
1151:debug:main p5.24-types-serialiser 1.0.0_0  is active
1152:debug:main Merging existing variants '' into variants
1153:debug:main new fully merged portvariants:
1154:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-types-serialiser
1155:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1156:debug:main Re-registering default for configure.universal_args
1157:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1158:debug:main Re-registering default for livecheck.version
1159:debug:main only one arch supported, so not adding the default universal variant
1160:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1161:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1162:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1163:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1164:debug:main No need to upgrade! p5.24-types-serialiser 1.0.0_0 >= p5.24-types-serialiser 1.0.0_0
1165:debug:main epoch: in tree: 0 installed: 0
1166:debug:main p5.24-math-cdf 0.100.0_0 exists in the ports tree
1167:debug:main p5.24-math-cdf 0.100.0_0  is the latest installed
1168:debug:main p5.24-math-cdf 0.100.0_0  is active
1169:debug:main Merging existing variants '' into variants
1170:debug:main new fully merged portvariants:
1171:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-math-cdf
1172:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1173:debug:main Re-registering default for configure.universal_args
1174:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1175:debug:main Re-registering default for livecheck.version
1176:debug:main adding the default universal variant
1177:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1178:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1179:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1180:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1181:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1182:debug:main No need to upgrade! p5.24-math-cdf 0.100.0_0 >= p5.24-math-cdf 0.100.0_0
1183:debug:main epoch: in tree: 0 installed: 0
1184:debug:main p5.24-xml-simple 2.240.0_0 exists in the ports tree
1185:debug:main p5.24-xml-simple 2.240.0_0  is the latest installed
1186:debug:main p5.24-xml-simple 2.240.0_0  is active
1187:debug:main Merging existing variants '' into variants
1188:debug:main new fully merged portvariants:
1189:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-simple
1190:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1191:debug:main Re-registering default for configure.universal_args
1192:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1193:debug:main Re-registering default for livecheck.version
1194:debug:main only one arch supported, so not adding the default universal variant
1195:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1196:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1197:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1198:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1199:debug:main No need to upgrade! p5.24-xml-simple 2.240.0_0 >= p5.24-xml-simple 2.240.0_0
1200:debug:main epoch: in tree: 0 installed: 0
1201:debug:main p5.24-xml-namespacesupport 1.120.0_0 exists in the ports tree
1202:debug:main p5.24-xml-namespacesupport 1.120.0_0  is the latest installed
1203:debug:main p5.24-xml-namespacesupport 1.120.0_0  is active
1204:debug:main Merging existing variants '' into variants
1205:debug:main new fully merged portvariants:
1206:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-namespacesupport
1207:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1208:debug:main Re-registering default for configure.universal_args
1209:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1210:debug:main Re-registering default for livecheck.version
1211:debug:main only one arch supported, so not adding the default universal variant
1212:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1213:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1214:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1215:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1216:debug:main No need to upgrade! p5.24-xml-namespacesupport 1.120.0_0 >= p5.24-xml-namespacesupport 1.120.0_0
1217:debug:main epoch: in tree: 0 installed: 0
1218:debug:main p5.24-xml-sax 0.990.0_2 exists in the ports tree
1219:debug:main p5.24-xml-sax 0.990.0_2  is the latest installed
1220:debug:main p5.24-xml-sax 0.990.0_2  is active
1221:debug:main Merging existing variants '' into variants
1222:debug:main new fully merged portvariants:
1223:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-sax
1224:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1225:debug:main Re-registering default for configure.universal_args
1226:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1227:debug:main Re-registering default for livecheck.version
1228:debug:main only one arch supported, so not adding the default universal variant
1229:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1230:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1231:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1232:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1233:debug:main No need to upgrade! p5.24-xml-sax 0.990.0_2 >= p5.24-xml-sax 0.990.0_2
1234:debug:main epoch: in tree: 0 installed: 0
1235:debug:main p5.24-xml-sax-base 1.90.0_0 exists in the ports tree
1236:debug:main p5.24-xml-sax-base 1.90.0_0  is the latest installed
1237:debug:main p5.24-xml-sax-base 1.90.0_0  is active
1238:debug:main Merging existing variants '' into variants
1239:debug:main new fully merged portvariants:
1240:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-sax-base
1241:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1242:debug:main Re-registering default for configure.universal_args
1243:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1244:debug:main Re-registering default for livecheck.version
1245:debug:main adding the default universal variant
1246:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1247:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1248:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1249:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1250:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1251:debug:main No need to upgrade! p5.24-xml-sax-base 1.90.0_0 >= p5.24-xml-sax-base 1.90.0_0
1252:debug:main epoch: in tree: 0 installed: 0
1253:debug:main p5.24-xml-sax-expat 0.510.0_1 exists in the ports tree
1254:debug:main p5.24-xml-sax-expat 0.510.0_1  is the latest installed
1255:debug:main p5.24-xml-sax-expat 0.510.0_1  is active
1256:debug:main Merging existing variants '' into variants
1257:debug:main new fully merged portvariants:
1258:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-sax-expat
1259:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1260:debug:main Re-registering default for configure.universal_args
1261:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1262:debug:main Re-registering default for livecheck.version
1263:debug:main only one arch supported, so not adding the default universal variant
1264:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1265:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1266:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1267:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1268:debug:main No need to upgrade! p5.24-xml-sax-expat 0.510.0_1 >= p5.24-xml-sax-expat 0.510.0_1
1269:debug:main epoch: in tree: 0 installed: 0
1270:debug:main p5.24-xml-parser 2.440.0_0 exists in the ports tree
1271:debug:main p5.24-xml-parser 2.440.0_0  is the latest installed
1272:debug:main p5.24-xml-parser 2.440.0_0  is active
1273:debug:main Merging existing variants '' into variants
1274:debug:main new fully merged portvariants:
1275:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-xml-parser
1276:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1277:debug:main Re-registering default for configure.universal_args
1278:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1279:debug:main Re-registering default for livecheck.version
1280:debug:main adding the default universal variant
1281:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1282:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1283:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1284:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1285:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1286:debug:main No need to upgrade! p5.24-xml-parser 2.440.0_0 >= p5.24-xml-parser 2.440.0_0
1287:debug:main epoch: in tree: 0 installed: 0
1288:debug:main p5.24-libwww-perl 6.270.0_0 exists in the ports tree
1289:debug:main p5.24-libwww-perl 6.270.0_0  is the latest installed
1290:debug:main p5.24-libwww-perl 6.270.0_0  is active
1291:debug:main Merging existing variants '' into variants
1292:debug:main new fully merged portvariants:
1293:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-libwww-perl
1294:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1295:debug:main Re-registering default for configure.universal_args
1296:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1297:debug:main Re-registering default for livecheck.version
1298:debug:main only one arch supported, so not adding the default universal variant
1299:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1300:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1301:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1302:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1303:debug:main No need to upgrade! p5.24-libwww-perl 6.270.0_0 >= p5.24-libwww-perl 6.270.0_0
1304:debug:main epoch: in tree: 0 installed: 0
1305:debug:main p5.24-encode-locale 1.50.0_0 exists in the ports tree
1306:debug:main p5.24-encode-locale 1.50.0_0  is the latest installed
1307:debug:main p5.24-encode-locale 1.50.0_0  is active
1308:debug:main Merging existing variants '' into variants
1309:debug:main new fully merged portvariants:
1310:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-encode-locale
1311:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1312:debug:main Re-registering default for configure.universal_args
1313:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1314:debug:main Re-registering default for livecheck.version
1315:debug:main only one arch supported, so not adding the default universal variant
1316:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1317:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1318:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1319:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1320:debug:main No need to upgrade! p5.24-encode-locale 1.50.0_0 >= p5.24-encode-locale 1.50.0_0
1321:debug:main epoch: in tree: 0 installed: 0
1322:debug:main p5.24-file-listing 6.40.0_1 exists in the ports tree
1323:debug:main p5.24-file-listing 6.40.0_1  is the latest installed
1324:debug:main p5.24-file-listing 6.40.0_1  is active
1325:debug:main Merging existing variants '' into variants
1326:debug:main new fully merged portvariants:
1327:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-file-listing
1328:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1329:debug:main Re-registering default for configure.universal_args
1330:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1331:debug:main Re-registering default for livecheck.version
1332:debug:main only one arch supported, so not adding the default universal variant
1333:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1334:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1335:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1336:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1337:debug:main No need to upgrade! p5.24-file-listing 6.40.0_1 >= p5.24-file-listing 6.40.0_1
1338:debug:main epoch: in tree: 0 installed: 0
1339:debug:main p5.24-http-date 6.20.0_1 exists in the ports tree
1340:debug:main p5.24-http-date 6.20.0_1  is the latest installed
1341:debug:main p5.24-http-date 6.20.0_1  is active
1342:debug:main Merging existing variants '' into variants
1343:debug:main new fully merged portvariants:
1344:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-http-date
1345:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1346:debug:main Re-registering default for configure.universal_args
1347:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1348:debug:main Re-registering default for livecheck.version
1349:debug:main only one arch supported, so not adding the default universal variant
1350:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1351:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1352:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1353:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1354:debug:main No need to upgrade! p5.24-http-date 6.20.0_1 >= p5.24-http-date 6.20.0_1
1355:debug:main epoch: in tree: 0 installed: 0
1356:debug:main p5.24-html-form 6.30.0_1 exists in the ports tree
1357:debug:main p5.24-html-form 6.30.0_1  is the latest installed
1358:debug:main p5.24-html-form 6.30.0_1  is active
1359:debug:main Merging existing variants '' into variants
1360:debug:main new fully merged portvariants:
1361:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-html-form
1362:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1363:debug:main Re-registering default for configure.universal_args
1364:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1365:debug:main Re-registering default for livecheck.version
1366:debug:main only one arch supported, so not adding the default universal variant
1367:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1368:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1369:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1370:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1371:debug:main No need to upgrade! p5.24-html-form 6.30.0_1 >= p5.24-html-form 6.30.0_1
1372:debug:main epoch: in tree: 0 installed: 0
1373:debug:main p5.24-http-message 6.130.0_0 exists in the ports tree
1374:debug:main p5.24-http-message 6.130.0_0  is the latest installed
1375:debug:main p5.24-http-message 6.130.0_0  is active
1376:debug:main Merging existing variants '' into variants
1377:debug:main new fully merged portvariants:
1378:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-http-message
1379:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1380:debug:main Re-registering default for configure.universal_args
1381:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1382:debug:main Re-registering default for livecheck.version
1383:debug:main only one arch supported, so not adding the default universal variant
1384:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1385:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1386:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1387:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1388:debug:main No need to upgrade! p5.24-http-message 6.130.0_0 >= p5.24-http-message 6.130.0_0
1389:debug:main epoch: in tree: 0 installed: 0
1390:debug:main p5.24-io-html 1.1.0_0 exists in the ports tree
1391:debug:main p5.24-io-html 1.1.0_0  is the latest installed
1392:debug:main p5.24-io-html 1.1.0_0  is active
1393:debug:main Merging existing variants '' into variants
1394:debug:main new fully merged portvariants:
1395:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-html
1396:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1397:debug:main Re-registering default for configure.universal_args
1398:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1399:debug:main Re-registering default for livecheck.version
1400:debug:main only one arch supported, so not adding the default universal variant
1401:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1402:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1403:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1404:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1405:debug:main No need to upgrade! p5.24-io-html 1.1.0_0 >= p5.24-io-html 1.1.0_0
1406:debug:main epoch: in tree: 0 installed: 0
1407:debug:main p5.24-lwp-mediatypes 6.20.0_1 exists in the ports tree
1408:debug:main p5.24-lwp-mediatypes 6.20.0_1  is the latest installed
1409:debug:main p5.24-lwp-mediatypes 6.20.0_1  is active
1410:debug:main Merging existing variants '' into variants
1411:debug:main new fully merged portvariants:
1412:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-lwp-mediatypes
1413:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1414:debug:main Re-registering default for configure.universal_args
1415:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1416:debug:main Re-registering default for livecheck.version
1417:debug:main only one arch supported, so not adding the default universal variant
1418:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1419:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1420:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1421:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1422:debug:main No need to upgrade! p5.24-lwp-mediatypes 6.20.0_1 >= p5.24-lwp-mediatypes 6.20.0_1
1423:debug:main epoch: in tree: 0 installed: 0
1424:debug:main p5.24-uri 1.720.0_0 exists in the ports tree
1425:debug:main p5.24-uri 1.720.0_0  is the latest installed
1426:debug:main p5.24-uri 1.720.0_0  is active
1427:debug:main Merging existing variants '' into variants
1428:debug:main new fully merged portvariants:
1429:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-uri
1430:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1431:debug:main Re-registering default for configure.universal_args
1432:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1433:debug:main Re-registering default for livecheck.version
1434:debug:main only one arch supported, so not adding the default universal variant
1435:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1436:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1437:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1438:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1439:debug:main No need to upgrade! p5.24-uri 1.720.0_0 >= p5.24-uri 1.720.0_0
1440:debug:main epoch: in tree: 0 installed: 0
1441:debug:main p5.24-http-cookies 6.40.0_0 exists in the ports tree
1442:debug:main p5.24-http-cookies 6.40.0_0  is the latest installed
1443:debug:main p5.24-http-cookies 6.40.0_0  is active
1444:debug:main Merging existing variants '' into variants
1445:debug:main new fully merged portvariants:
1446:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-http-cookies
1447:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1448:debug:main Re-registering default for configure.universal_args
1449:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1450:debug:main Re-registering default for livecheck.version
1451:debug:main only one arch supported, so not adding the default universal variant
1452:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1453:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1454:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1455:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1456:debug:main No need to upgrade! p5.24-http-cookies 6.40.0_0 >= p5.24-http-cookies 6.40.0_0
1457:debug:main epoch: in tree: 0 installed: 0
1458:debug:main p5.24-http-daemon 6.10.0_1 exists in the ports tree
1459:debug:main p5.24-http-daemon 6.10.0_1  is the latest installed
1460:debug:main p5.24-http-daemon 6.10.0_1  is active
1461:debug:main Merging existing variants '' into variants
1462:debug:main new fully merged portvariants:
1463:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-http-daemon
1464:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1465:debug:main Re-registering default for configure.universal_args
1466:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1467:debug:main Re-registering default for livecheck.version
1468:debug:main only one arch supported, so not adding the default universal variant
1469:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1470:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1471:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1472:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1473:debug:main No need to upgrade! p5.24-http-daemon 6.10.0_1 >= p5.24-http-daemon 6.10.0_1
1474:debug:main epoch: in tree: 0 installed: 0
1475:debug:main p5.24-http-negotiate 6.10.0_1 exists in the ports tree
1476:debug:main p5.24-http-negotiate 6.10.0_1  is the latest installed
1477:debug:main p5.24-http-negotiate 6.10.0_1  is active
1478:debug:main Merging existing variants '' into variants
1479:debug:main new fully merged portvariants:
1480:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-http-negotiate
1481:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1482:debug:main Re-registering default for configure.universal_args
1483:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1484:debug:main Re-registering default for livecheck.version
1485:debug:main only one arch supported, so not adding the default universal variant
1486:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1487:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1488:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1489:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1490:debug:main No need to upgrade! p5.24-http-negotiate 6.10.0_1 >= p5.24-http-negotiate 6.10.0_1
1491:debug:main epoch: in tree: 0 installed: 0
1492:debug:main p5.24-lwp-protocol-https 6.70.0_0 exists in the ports tree
1493:debug:main p5.24-lwp-protocol-https 6.70.0_0  is the latest installed
1494:debug:main p5.24-lwp-protocol-https 6.70.0_0  is active
1495:debug:main Merging existing variants '' into variants
1496:debug:main new fully merged portvariants:
1497:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-lwp-protocol-https
1498:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1499:debug:main Re-registering default for configure.universal_args
1500:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1501:debug:main Re-registering default for livecheck.version
1502:debug:main only one arch supported, so not adding the default universal variant
1503:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1504:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1505:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1506:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1507:debug:main No need to upgrade! p5.24-lwp-protocol-https 6.70.0_0 >= p5.24-lwp-protocol-https 6.70.0_0
1508:debug:main epoch: in tree: 0 installed: 0
1509:debug:main p5.24-io-socket-ssl 2.51.0_0 exists in the ports tree
1510:debug:main p5.24-io-socket-ssl 2.51.0_0  is the latest installed
1511:debug:main p5.24-io-socket-ssl 2.51.0_0  is active
1512:debug:main Merging existing variants '' into variants
1513:debug:main new fully merged portvariants:
1514:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-socket-ssl
1515:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1516:debug:main Re-registering default for configure.universal_args
1517:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1518:debug:main Re-registering default for livecheck.version
1519:debug:main only one arch supported, so not adding the default universal variant
1520:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1521:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1522:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1523:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1524:debug:main No need to upgrade! p5.24-io-socket-ssl 2.51.0_0 >= p5.24-io-socket-ssl 2.51.0_0
1525:debug:main epoch: in tree: 0 installed: 0
1526:debug:main p5.24-mozilla-ca 20160104_0 exists in the ports tree
1527:debug:main p5.24-mozilla-ca 20160104_0  is the latest installed
1528:debug:main p5.24-mozilla-ca 20160104_0  is active
1529:debug:main Merging existing variants '' into variants
1530:debug:main new fully merged portvariants:
1531:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-mozilla-ca
1532:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1533:debug:main Re-registering default for configure.universal_args
1534:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1535:debug:main Re-registering default for livecheck.version
1536:debug:main only one arch supported, so not adding the default universal variant
1537:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1538:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1539:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1540:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1541:debug:main No need to upgrade! p5.24-mozilla-ca 20160104_0 >= p5.24-mozilla-ca 20160104_0
1542:debug:main epoch: in tree: 0 installed: 0
1543:debug:main p5.24-net-libidn 0.120.0_4 exists in the ports tree
1544:debug:main p5.24-net-libidn 0.120.0_4  is the latest installed
1545:debug:main p5.24-net-libidn 0.120.0_4  is active
1546:debug:main Merging existing variants '' into variants
1547:debug:main new fully merged portvariants:
1548:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-net-libidn
1549:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1550:debug:main Re-registering default for configure.universal_args
1551:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1552:debug:main Re-registering default for livecheck.version
1553:debug:main adding the default universal variant
1554:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1555:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1556:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1557:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1558:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1559:debug:main No need to upgrade! p5.24-net-libidn 0.120.0_4 >= p5.24-net-libidn 0.120.0_4
1560:debug:main epoch: in tree: 0 installed: 0
1561:debug:main p5.24-net-ssleay 1.810.0_0 exists in the ports tree
1562:debug:main p5.24-net-ssleay 1.810.0_0  is the latest installed
1563:debug:main p5.24-net-ssleay 1.810.0_0  is active
1564:debug:main Merging existing variants '' into variants
1565:debug:main new fully merged portvariants:
1566:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-net-ssleay
1567:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1568:debug:main Re-registering default for configure.universal_args
1569:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1570:debug:main Re-registering default for livecheck.version
1571:debug:main adding the default universal variant
1572:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1573:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1574:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1575:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1576:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1577:debug:main No need to upgrade! p5.24-net-ssleay 1.810.0_0 >= p5.24-net-ssleay 1.810.0_0
1578:debug:main epoch: in tree: 0 installed: 0
1579:debug:main p5.24-net-http 6.170.0_0 exists in the ports tree
1580:debug:main p5.24-net-http 6.170.0_0  is the latest installed
1581:debug:main p5.24-net-http 6.170.0_0  is active
1582:debug:main Merging existing variants '' into variants
1583:debug:main new fully merged portvariants:
1584:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-net-http
1585:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1586:debug:main Re-registering default for configure.universal_args
1587:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1588:debug:main Re-registering default for livecheck.version
1589:debug:main only one arch supported, so not adding the default universal variant
1590:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1591:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1592:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1593:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1594:debug:main No need to upgrade! p5.24-net-http 6.170.0_0 >= p5.24-net-http 6.170.0_0
1595:debug:main epoch: in tree: 0 installed: 0
1596:debug:main p5.24-www-robotrules 6.20.0_1 exists in the ports tree
1597:debug:main p5.24-www-robotrules 6.20.0_1  is the latest installed
1598:debug:main p5.24-www-robotrules 6.20.0_1  is active
1599:debug:main Merging existing variants '' into variants
1600:debug:main new fully merged portvariants:
1601:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-www-robotrules
1602:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1603:debug:main Re-registering default for configure.universal_args
1604:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1605:debug:main Re-registering default for livecheck.version
1606:debug:main only one arch supported, so not adding the default universal variant
1607:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1608:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1609:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1610:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1611:debug:main No need to upgrade! p5.24-www-robotrules 6.20.0_1 >= p5.24-www-robotrules 6.20.0_1
1612:debug:main epoch: in tree: 0 installed: 0
1613:debug:main p5.24-soap-lite 1.220.0_0 exists in the ports tree
1614:debug:main p5.24-soap-lite 1.220.0_0  is the latest installed
1615:debug:main p5.24-soap-lite 1.220.0_0  is active
1616:debug:main Merging existing variants '' into variants
1617:debug:main new fully merged portvariants:
1618:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-soap-lite
1619:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1620:debug:main Re-registering default for configure.universal_args
1621:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1622:debug:main Re-registering default for livecheck.version
1623:debug:main only one arch supported, so not adding the default universal variant
1624:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1625:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1626:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1627:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1628:debug:main No need to upgrade! p5.24-soap-lite 1.220.0_0 >= p5.24-soap-lite 1.220.0_0
1629:debug:main epoch: in tree: 0 installed: 0
1630:debug:main p5.24-class-inspector 1.320.0_0 exists in the ports tree
1631:debug:main p5.24-class-inspector 1.320.0_0  is the latest installed
1632:debug:main p5.24-class-inspector 1.320.0_0  is active
1633:debug:main Merging existing variants '' into variants
1634:debug:main new fully merged portvariants:
1635:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-class-inspector
1636:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1637:debug:main Re-registering default for configure.universal_args
1638:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1639:debug:main Re-registering default for livecheck.version
1640:debug:main only one arch supported, so not adding the default universal variant
1641:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1642:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1643:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1644:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1645:debug:main No need to upgrade! p5.24-class-inspector 1.320.0_0 >= p5.24-class-inspector 1.320.0_0
1646:debug:main epoch: in tree: 0 installed: 0
1647:debug:main p5.24-io-compress 2.74.0_0 exists in the ports tree
1648:debug:main p5.24-io-compress 2.74.0_0  is the latest installed
1649:debug:main p5.24-io-compress 2.74.0_0  is active
1650:debug:main Merging existing variants '' into variants
1651:debug:main new fully merged portvariants:
1652:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-compress
1653:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1654:debug:main Re-registering default for configure.universal_args
1655:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1656:debug:main Re-registering default for livecheck.version
1657:debug:main only one arch supported, so not adding the default universal variant
1658:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1659:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1660:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1661:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1662:debug:main No need to upgrade! p5.24-io-compress 2.74.0_0 >= p5.24-io-compress 2.74.0_0
1663:debug:main epoch: in tree: 0 installed: 0
1664:debug:main p5.24-compress-raw-bzip2 2.74.0_0 exists in the ports tree
1665:debug:main p5.24-compress-raw-bzip2 2.74.0_0  is the latest installed
1666:debug:main p5.24-compress-raw-bzip2 2.74.0_0  is active
1667:debug:main Merging existing variants '' into variants
1668:debug:main new fully merged portvariants:
1669:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-compress-raw-bzip2
1670:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1671:debug:main Re-registering default for configure.universal_args
1672:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1673:debug:main Re-registering default for livecheck.version
1674:debug:main adding the default universal variant
1675:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1676:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1677:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1678:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1679:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1680:debug:main No need to upgrade! p5.24-compress-raw-bzip2 2.74.0_0 >= p5.24-compress-raw-bzip2 2.74.0_0
1681:debug:main epoch: in tree: 0 installed: 0
1682:debug:main p5.24-compress-raw-zlib 2.74.0_0 exists in the ports tree
1683:debug:main p5.24-compress-raw-zlib 2.74.0_0  is the latest installed
1684:debug:main p5.24-compress-raw-zlib 2.74.0_0  is active
1685:debug:main Merging existing variants '' into variants
1686:debug:main new fully merged portvariants:
1687:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-compress-raw-zlib
1688:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1689:debug:main Re-registering default for configure.universal_args
1690:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1691:debug:main Re-registering default for livecheck.version
1692:debug:main adding the default universal variant
1693:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1694:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1695:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1696:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1697:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1698:debug:main No need to upgrade! p5.24-compress-raw-zlib 2.74.0_0 >= p5.24-compress-raw-zlib 2.74.0_0
1699:debug:main epoch: in tree: 0 installed: 0
1700:debug:main p5.24-io-sessiondata 1.30.0_0 exists in the ports tree
1701:debug:main p5.24-io-sessiondata 1.30.0_0  is the latest installed
1702:debug:main p5.24-io-sessiondata 1.30.0_0  is active
1703:debug:main Merging existing variants '' into variants
1704:debug:main new fully merged portvariants:
1705:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-sessiondata
1706:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1707:debug:main Re-registering default for configure.universal_args
1708:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1709:debug:main Re-registering default for livecheck.version
1710:debug:main only one arch supported, so not adding the default universal variant
1711:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1712:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1713:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1714:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1715:debug:main No need to upgrade! p5.24-io-sessiondata 1.30.0_0 >= p5.24-io-sessiondata 1.30.0_0
1716:debug:main epoch: in tree: 0 installed: 0
1717:debug:main p5.24-mime-base64 3.150.0_0 exists in the ports tree
1718:debug:main p5.24-mime-base64 3.150.0_0  is the latest installed
1719:debug:main p5.24-mime-base64 3.150.0_0  is active
1720:debug:main Merging existing variants '' into variants
1721:debug:main new fully merged portvariants:
1722:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-mime-base64
1723:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1724:debug:main Re-registering default for configure.universal_args
1725:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1726:debug:main Re-registering default for livecheck.version
1727:debug:main adding the default universal variant
1728:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1729:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1730:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1731:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1732:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1733:debug:main No need to upgrade! p5.24-mime-base64 3.150.0_0 >= p5.24-mime-base64 3.150.0_0
1734:debug:main epoch: in tree: 0 installed: 0
1735:debug:main p5.24-mime-tools 5.509.0_0 exists in the ports tree
1736:debug:main p5.24-mime-tools 5.509.0_0  is the latest installed
1737:debug:main p5.24-mime-tools 5.509.0_0  is active
1738:debug:main Merging existing variants '' into variants
1739:debug:main new fully merged portvariants:
1740:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-mime-tools
1741:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1742:debug:main Re-registering default for configure.universal_args
1743:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1744:debug:main Re-registering default for livecheck.version
1745:debug:main only one arch supported, so not adding the default universal variant
1746:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1747:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1748:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1749:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1750:debug:main No need to upgrade! p5.24-mime-tools 5.509.0_0 >= p5.24-mime-tools 5.509.0_0
1751:debug:main epoch: in tree: 0 installed: 0
1752:debug:main p5.24-convert-binhex 1.125.0_0 exists in the ports tree
1753:debug:main p5.24-convert-binhex 1.125.0_0  is the latest installed
1754:debug:main p5.24-convert-binhex 1.125.0_0  is active
1755:debug:main Merging existing variants '' into variants
1756:debug:main new fully merged portvariants:
1757:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-convert-binhex
1758:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1759:debug:main Re-registering default for configure.universal_args
1760:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1761:debug:main Re-registering default for livecheck.version
1762:debug:main only one arch supported, so not adding the default universal variant
1763:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1764:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1765:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1766:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1767:debug:main No need to upgrade! p5.24-convert-binhex 1.125.0_0 >= p5.24-convert-binhex 1.125.0_0
1768:debug:main epoch: in tree: 0 installed: 0
1769:debug:main p5.24-file-temp 0.230.400_0 exists in the ports tree
1770:debug:main p5.24-file-temp 0.230.400_0  is the latest installed
1771:debug:main p5.24-file-temp 0.230.400_0  is active
1772:debug:main Merging existing variants '' into variants
1773:debug:main new fully merged portvariants:
1774:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-file-temp
1775:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1776:debug:main Re-registering default for configure.universal_args
1777:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1778:debug:main Re-registering default for livecheck.version
1779:debug:main only one arch supported, so not adding the default universal variant
1780:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1781:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1782:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1783:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1784:debug:main No need to upgrade! p5.24-file-temp 0.230.400_0 >= p5.24-file-temp 0.230.400_0
1785:debug:main epoch: in tree: 0 installed: 0
1786:debug:main p5.24-io-stringy 2.111.0_0 exists in the ports tree
1787:debug:main p5.24-io-stringy 2.111.0_0  is the latest installed
1788:debug:main p5.24-io-stringy 2.111.0_0  is active
1789:debug:main Merging existing variants '' into variants
1790:debug:main new fully merged portvariants:
1791:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-stringy
1792:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1793:debug:main Re-registering default for configure.universal_args
1794:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1795:debug:main Re-registering default for livecheck.version
1796:debug:main only one arch supported, so not adding the default universal variant
1797:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1798:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1799:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1800:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1801:debug:main No need to upgrade! p5.24-io-stringy 2.111.0_0 >= p5.24-io-stringy 2.111.0_0
1802:debug:main epoch: in tree: 0 installed: 0
1803:debug:main p5.24-mailtools 2.190.0_0 exists in the ports tree
1804:debug:main p5.24-mailtools 2.190.0_0  is the latest installed
1805:debug:main p5.24-mailtools 2.190.0_0  is active
1806:debug:main Merging existing variants '' into variants
1807:debug:main new fully merged portvariants:
1808:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-mailtools
1809:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1810:debug:main Re-registering default for configure.universal_args
1811:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1812:debug:main Re-registering default for livecheck.version
1813:debug:main only one arch supported, so not adding the default universal variant
1814:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1815:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1816:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1817:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1818:debug:main No need to upgrade! p5.24-mailtools 2.190.0_0 >= p5.24-mailtools 2.190.0_0
1819:debug:main epoch: in tree: 0 installed: 0
1820:debug:main p5.24-net 3.100.0_0 exists in the ports tree
1821:debug:main p5.24-net 3.100.0_0  is the latest installed
1822:debug:main p5.24-net 3.100.0_0  is active
1823:debug:main Merging existing variants '' into variants
1824:debug:main new fully merged portvariants:
1825:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-net
1826:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1827:debug:main Re-registering default for configure.universal_args
1828:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1829:debug:main Re-registering default for livecheck.version
1830:debug:main only one arch supported, so not adding the default universal variant
1831:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1832:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1833:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1834:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1835:debug:main No need to upgrade! p5.24-net 3.100.0_0 >= p5.24-net 3.100.0_0
1836:debug:main epoch: in tree: 0 installed: 0
1837:debug:main p5.24-authen-sasl 2.160.0_0 exists in the ports tree
1838:debug:main p5.24-authen-sasl 2.160.0_0  is the latest installed
1839:debug:main p5.24-authen-sasl 2.160.0_0  is active
1840:debug:main Merging existing variants '' into variants
1841:debug:main new fully merged portvariants:
1842:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-authen-sasl
1843:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1844:debug:main Re-registering default for configure.universal_args
1845:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1846:debug:main Re-registering default for livecheck.version
1847:debug:main only one arch supported, so not adding the default universal variant
1848:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1849:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1850:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1851:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1852:debug:main No need to upgrade! p5.24-authen-sasl 2.160.0_0 >= p5.24-authen-sasl 2.160.0_0
1853:debug:main epoch: in tree: 0 installed: 0
1854:debug:main p5.24-digest-hmac 1.30.0_0 exists in the ports tree
1855:debug:main p5.24-digest-hmac 1.30.0_0  is the latest installed
1856:debug:main p5.24-digest-hmac 1.30.0_0  is active
1857:debug:main Merging existing variants '' into variants
1858:debug:main new fully merged portvariants:
1859:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-digest-hmac
1860:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1861:debug:main Re-registering default for configure.universal_args
1862:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1863:debug:main Re-registering default for livecheck.version
1864:debug:main only one arch supported, so not adding the default universal variant
1865:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1866:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1867:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1868:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1869:debug:main No need to upgrade! p5.24-digest-hmac 1.30.0_0 >= p5.24-digest-hmac 1.30.0_0
1870:debug:main epoch: in tree: 0 installed: 0
1871:debug:main p5.24-digest-sha1 2.130.0_4 exists in the ports tree
1872:debug:main p5.24-digest-sha1 2.130.0_4  is the latest installed
1873:debug:main p5.24-digest-sha1 2.130.0_4  is active
1874:debug:main Merging existing variants '' into variants
1875:debug:main new fully merged portvariants:
1876:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-digest-sha1
1877:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1878:debug:main Re-registering default for configure.universal_args
1879:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1880:debug:main Re-registering default for livecheck.version
1881:debug:main adding the default universal variant
1882:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1883:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1884:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1885:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1886:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1887:debug:main No need to upgrade! p5.24-digest-sha1 2.130.0_4 >= p5.24-digest-sha1 2.130.0_4
1888:debug:main epoch: in tree: 0 installed: 0
1889:debug:main p5.24-gssapi 0.280.0_3 exists in the ports tree
1890:debug:main p5.24-gssapi 0.280.0_3  is the latest installed
1891:debug:main p5.24-gssapi 0.280.0_3  is active
1892:debug:main Merging existing variants '' into variants
1893:debug:main new fully merged portvariants:
1894:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-gssapi
1895:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1896:debug:main Re-registering default for configure.universal_args
1897:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1898:debug:main Re-registering default for livecheck.version
1899:debug:main adding the default universal variant
1900:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1901:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1902:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1903:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1904:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1905:debug:main No need to upgrade! p5.24-gssapi 0.280.0_3 >= p5.24-gssapi 0.280.0_3
1906:debug:main epoch: in tree: 0 installed: 0
1907:debug:main kerberos5 1.15.2_0 exists in the ports tree
1908:debug:main kerberos5 1.15.2_0  is the latest installed
1909:debug:main kerberos5 1.15.2_0  is active
1910:debug:main Merging existing variants '' into variants
1911:debug:main new fully merged portvariants:
1912:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/kerberos5
1913:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1914:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
1915:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang <= 318.0.61}
1916:debug:main adding the default universal variant
1917:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1918:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1919:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1920:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1921:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1922:debug:main No need to upgrade! kerberos5 1.15.2_0 >= kerberos5 1.15.2_0
1923:debug:main epoch: in tree: 0 installed: 0
1924:debug:main libcomerr 1.43.6_0 exists in the ports tree
1925:debug:main libcomerr 1.43.6_0  is the latest installed
1926:debug:main libcomerr 1.43.6_0  is active
1927:debug:main Merging existing variants '' into variants
1928:debug:main new fully merged portvariants:
1929:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/e2fsprogs
1930:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1931:debug:main adding the default universal variant
1932:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1933:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1934:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1935:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1936:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1937:debug:main No need to upgrade! libcomerr 1.43.6_0 >= libcomerr 1.43.6_0
1938:debug:main epoch: in tree: 0 installed: 0
1939:debug:main p5.24-io-socket-ip 0.390.0_0 exists in the ports tree
1940:debug:main p5.24-io-socket-ip 0.390.0_0  is the latest installed
1941:debug:main p5.24-io-socket-ip 0.390.0_0  is active
1942:debug:main Merging existing variants '' into variants
1943:debug:main new fully merged portvariants:
1944:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-io-socket-ip
1945:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1946:debug:main Re-registering default for configure.universal_args
1947:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1948:debug:main Re-registering default for livecheck.version
1949:debug:main only one arch supported, so not adding the default universal variant
1950:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1951:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1952:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1953:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1954:debug:main No need to upgrade! p5.24-io-socket-ip 0.390.0_0 >= p5.24-io-socket-ip 0.390.0_0
1955:debug:main epoch: in tree: 0 installed: 0
1956:debug:main p5.24-socket 2.24.0_0 exists in the ports tree
1957:debug:main p5.24-socket 2.24.0_0  is the latest installed
1958:debug:main p5.24-socket 2.24.0_0  is active
1959:debug:main Merging existing variants '' into variants
1960:debug:main new fully merged portvariants:
1961:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-socket
1962:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1963:debug:main Re-registering default for configure.universal_args
1964:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1965:debug:main Re-registering default for livecheck.version
1966:debug:main adding the default universal variant
1967:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1968:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1969:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1970:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1971:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1972:debug:main No need to upgrade! p5.24-socket 2.24.0_0 >= p5.24-socket 2.24.0_0
1973:debug:main epoch: in tree: 0 installed: 0
1974:debug:main p5.24-timedate 2.300.0_1 exists in the ports tree
1975:debug:main p5.24-timedate 2.300.0_1  is the latest installed
1976:debug:main p5.24-timedate 2.300.0_1  is active
1977:debug:main Merging existing variants '' into variants
1978:debug:main new fully merged portvariants:
1979:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-timedate
1980:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1981:debug:main Re-registering default for configure.universal_args
1982:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
1983:debug:main Re-registering default for livecheck.version
1984:debug:main only one arch supported, so not adding the default universal variant
1985:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1986:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1987:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1988:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1989:debug:main No need to upgrade! p5.24-timedate 2.300.0_1 >= p5.24-timedate 2.300.0_1
1990:debug:main epoch: in tree: 0 installed: 0
1991:debug:main p5.24-task-weaken 1.40.0_1 exists in the ports tree
1992:debug:main p5.24-task-weaken 1.40.0_1  is the latest installed
1993:debug:main p5.24-task-weaken 1.40.0_1  is active
1994:debug:main Merging existing variants '' into variants
1995:debug:main new fully merged portvariants:
1996:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-task-weaken
1997:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
1998:debug:main Re-registering default for configure.universal_args
1999:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
2000:debug:main Re-registering default for livecheck.version
2001:debug:main only one arch supported, so not adding the default universal variant
2002:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
2003:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
2004:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
2005:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
2006:debug:main No need to upgrade! p5.24-task-weaken 1.40.0_1 >= p5.24-task-weaken 1.40.0_1
2007:debug:main epoch: in tree: 0 installed: 0
2008:debug:main p5.24-log-log4perl 1.490.0_0 exists in the ports tree
2009:debug:main p5.24-log-log4perl 1.490.0_0  is the latest installed
2010:debug:main p5.24-log-log4perl 1.490.0_0  is active
2011:debug:main Merging existing variants '' into variants
2012:debug:main new fully merged portvariants:
2013:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/perl/p5-log-log4perl
2014:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
2015:debug:main Re-registering default for configure.universal_args
2016:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
2017:debug:main Re-registering default for livecheck.version
2018:debug:main only one arch supported, so not adding the default universal variant
2019:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
2020:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
2021:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
2022:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
2023:debug:main No need to upgrade! p5.24-log-log4perl 1.490.0_0 >= p5.24-log-log4perl 1.490.0_0
2024:debug:main epoch: in tree: 0 installed: 0
2025:debug:main py27-gnureadline 6.3.3-20151013_0 exists in the ports tree
2026:debug:main py27-gnureadline 6.3.3-20151013_0  is the latest installed
2027:debug:main py27-gnureadline 6.3.3-20151013_0  is active
2028:debug:main Merging existing variants '' into variants
2029:debug:main new fully merged portvariants:
2030:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-gnureadline
2031:debug:main OS darwin/17.0.0 (Mac OS X 10.13) arch i386
2032:debug:main Re-registering default for build.cmd
2033:debug:main Re-registering default for destroot.cmd
2034:debug:main Re-registering default for destroot.destdir
2035:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
2036:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
2037:debug:main adding the default universal variant
2038:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
2039:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
2040:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
2041:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
2042:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
2043:debug:main No need to upgrade! py27-gnureadline 6.3.3-20151013_0 >= py27-gnureadline 6.3.3-20151013_0
2044:msg:main --->  Computing dependencies for memesuite:info:main .:debug:main Searching for dependency: ghostscript
2045:debug:main Found Dependency: receipt exists for ghostscript
2046:debug:main Searching for dependency: libxml2
2047:debug:main Found Dependency: receipt exists for libxml2
2048:debug:main Searching for dependency: libxslt
2049:debug:main Found Dependency: receipt exists for libxslt
2050:debug:main Searching for dependency: perl5.24
2051:debug:main Found Dependency: receipt exists for perl5.24
2052:debug:main Searching for dependency: p5.24-file-which
2053:debug:main Found Dependency: receipt exists for p5.24-file-which
2054:debug:main Searching for dependency: p5.24-html-template
2055:debug:main Found Dependency: receipt exists for p5.24-html-template
2056:debug:main Searching for dependency: p5.24-html-tree
2057:debug:main Found Dependency: receipt exists for p5.24-html-tree
2058:debug:main Searching for dependency: p5.24-json
2059:debug:main Found Dependency: receipt exists for p5.24-json
2060:debug:main Searching for dependency: p5.24-math-cdf
2061:debug:main Found Dependency: receipt exists for p5.24-math-cdf
2062:debug:main Searching for dependency: p5.24-xml-simple
2063:debug:main Found Dependency: receipt exists for p5.24-xml-simple
2064:debug:main Searching for dependency: p5.24-soap-lite
2065:debug:main Found Dependency: receipt exists for p5.24-soap-lite
2066:debug:main Searching for dependency: p5.24-log-log4perl
2067:debug:main Found Dependency: receipt exists for p5.24-log-log4perl
2068:debug:main Searching for dependency: python27
2069:debug:main Found Dependency: receipt exists for python27
2070:debug:main Searching for dependency: py27-gnureadline
2071:debug:main Found Dependency: receipt exists for py27-gnureadline
2072:debug:main Searching for dependency: zlib
2073:debug:main Found Dependency: receipt exists for zlib
2074:debug:main Executing org.macports.main (memesuite)
2075:debug:main dropping privileges: euid changed to 502, egid changed to 501.
2076:debug:fetch fetch phase started at Thu Oct 12 17:42:54 PDT 2017
2077:notice:fetch --->  Fetching distfiles for memesuite
2078:debug:fetch Executing org.macports.fetch (memesuite)
2079:debug:fetch Privilege de-escalation not attempted as not running as root.
2080:debug:checksum checksum phase started at Thu Oct 12 17:42:54 PDT 2017
2081:notice:checksum --->  Verifying checksums for memesuite
2082:debug:checksum Executing org.macports.checksum (memesuite)
2083:info:checksum --->  Checksumming meme-4.12.1.tar.gz
2084:debug:checksum Calculated (rmd160) is 87f16c5686924d00a2767f1fe1e56961e9f0d84c
2085:debug:checksum Correct (rmd160) checksum for meme-4.12.1.tar.gz
2086:debug:checksum Calculated (sha256) is c506ba2584666861b9b71f8ee224b32b07d5dd480005af75d6a6f559142a6a62
2087:debug:checksum Correct (sha256) checksum for meme-4.12.1.tar.gz
2088:debug:checksum Privilege de-escalation not attempted as not running as root.
2089:debug:extract extract phase started at Thu Oct 12 17:42:54 PDT 2017
2090:notice:extract --->  Extracting memesuite
2091:debug:extract Executing org.macports.extract (memesuite)
2092:info:extract --->  Extracting meme-4.12.1.tar.gz
2093:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/memesuite/meme-4.12.1.tar.gz'
2094:debug:extract Environment:
2095:debug:extract CC_PRINT_OPTIONS='YES'
2096:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/.CC_PRINT_OPTIONS'
2097:debug:extract CPATH='/opt/local/include'
2098:debug:extract LIBRARY_PATH='/opt/local/lib'
2099:debug:extract MACOSX_DEPLOYMENT_TARGET='10.13'
2100:info:extract Executing:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/memesuite/meme-4.12.1.tar.gz' | /usr/bin/tar -xf -
2101:debug:extract system:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/memesuite/meme-4.12.1.tar.gz' | /usr/bin/tar -xf -
2102:debug:extract euid/egid changed to: 0/0
2103:debug:extract chowned /opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work to macports
2104:debug:extract euid/egid changed to: 502/501
2105:debug:extract Privilege de-escalation not attempted as not running as root.
2106:debug:patch patch phase started at Thu Oct 12 17:42:55 PDT 2017
2107:debug:patch Executing org.macports.patch (memesuite)
2108:debug:patch Privilege de-escalation not attempted as not running as root.
2109:debug:configure configure phase started at Thu Oct 12 17:42:55 PDT 2017
2110:notice:configure --->  Configuring memesuite
2111:debug:configure Preferred compilers: clang macports-clang-4.0
2112:debug:configure Using compiler 'Xcode Clang'
2113:debug:configure Executing org.macports.configure (memesuite)
2114:debug:configure Environment:
2115:debug:configure CC='/usr/bin/clang'
2116:debug:configure CC_PRINT_OPTIONS='YES'
2117:debug:configure CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/.CC_PRINT_OPTIONS'
2118:debug:configure CFLAGS='-pipe -Os -arch x86_64'
2119:debug:configure CPATH='/opt/local/include'
2120:debug:configure CPPFLAGS='-I/opt/local/include'
2121:debug:configure CXX='/usr/bin/clang++'
2122:debug:configure CXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64'
2123:debug:configure F77FLAGS='-m64'
2124:debug:configure F90FLAGS='-pipe -Os -m64'
2125:debug:configure FCFLAGS='-pipe -Os -m64'
2126:debug:configure FFLAGS='-pipe -Os'
2127:debug:configure INSTALL='/usr/bin/install -c'
2128:debug:configure LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64'
2129:debug:configure LIBRARY_PATH='/opt/local/lib'
2130:debug:configure MACOSX_DEPLOYMENT_TARGET='10.13'
2131:debug:configure OBJC='/usr/bin/clang'
2132:debug:configure OBJCFLAGS='-pipe -Os -arch x86_64'
2133:debug:configure OBJCXX='/usr/bin/clang++'
2134:debug:configure OBJCXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64'
2135:info:configure Executing:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && ./configure --prefix=/opt/local --with-python=/opt/local/bin/python2.7 --with-perl=/opt/local/bin/perl5.24 --with-gs=/opt/local/bin/gs
2136:debug:configure system:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && ./configure --prefix=/opt/local --with-python=/opt/local/bin/python2.7 --with-perl=/opt/local/bin/perl5.24 --with-gs=/opt/local/bin/gs
2137:info:configure checking for a BSD-compatible install... /usr/bin/install -c
2138:info:configure checking whether build environment is sane... yes
2139:info:configure checking for a thread-safe mkdir -p... config/install-sh -c -d
2140:info:configure checking for gawk... no
2141:info:configure checking for mawk... no
2142:info:configure checking for nawk... no
2143:info:configure checking for awk... awk
2144:info:configure checking whether make sets $(MAKE)... yes
2145:info:configure checking whether make supports nested variables... yes
2146:info:configure checking whether make supports nested variables... (cached) yes
2147:info:configure checking for gcc... /usr/bin/clang
2148:info:configure checking whether the C compiler works... yes
2149:info:configure checking for C compiler default output file name... a.out
2150:info:configure checking for suffix of executables...
2151:info:configure checking whether we are cross compiling... no
2152:info:configure checking for suffix of object files... o
2153:info:configure checking whether we are using the GNU C compiler... yes
2154:info:configure checking whether /usr/bin/clang accepts -g... yes
2155:info:configure checking for /usr/bin/clang option to accept ISO C89... none needed
2156:info:configure checking whether /usr/bin/clang understands -c and -o together... yes
2157:info:configure checking for style of include used by make... GNU
2158:info:configure checking dependency style of /usr/bin/clang... gcc3
2159:info:configure checking whether /usr/bin/clang and cc understand -c and -o together... yes
2160:info:configure checking build system type... x86_64-apple-darwin17.0.0
2161:info:configure checking host system type... x86_64-apple-darwin17.0.0
2162:info:configure checking how to print strings... printf
2163:info:configure checking for a sed that does not truncate output... /usr/bin/sed
2164:info:configure checking for grep that handles long lines and -e... /usr/bin/grep
2165:info:configure checking for egrep... /usr/bin/grep -E
2166:info:configure checking for fgrep... /usr/bin/grep -F
2167:info:configure checking for ld used by /usr/bin/clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
2168:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
2169:info:configure checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm -B
2170:info:configure checking the name lister (/opt/local/bin/nm -B) interface... BSD nm
2171:info:configure checking whether ln -s works... yes
2172:info:configure checking the maximum length of command line arguments... 196608
2173:info:configure checking how to convert x86_64-apple-darwin17.0.0 file names to x86_64-apple-darwin17.0.0 format... func_convert_file_noop
2174:info:configure checking how to convert x86_64-apple-darwin17.0.0 file names to toolchain format... func_convert_file_noop
2175:info:configure checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
2176:info:configure checking for objdump... objdump
2177:info:configure checking how to recognize dependent libraries... pass_all
2178:info:configure checking for dlltool... no
2179:info:configure checking how to associate runtime and link libraries... printf %s\n
2180:info:configure checking for ar... ar
2181:info:configure checking for archiver @FILE support... no
2182:info:configure checking for strip... strip
2183:info:configure checking for ranlib... ranlib
2184:info:configure checking command to parse /opt/local/bin/nm -B output from /usr/bin/clang object... ok
2185:info:configure checking for sysroot... no
2186:info:configure checking for a working dd... /bin/dd
2187:info:configure checking how to truncate binary pipes... /bin/dd bs=4096 count=1
2188:info:configure checking for mt... no
2189:info:configure checking if : is a manifest tool... no
2190:info:configure checking for dsymutil... dsymutil
2191:info:configure checking for nmedit... nmedit
2192:info:configure checking for lipo... lipo
2193:info:configure checking for otool... otool
2194:info:configure checking for otool64... no
2195:info:configure checking for -single_module linker flag... yes
2196:info:configure checking for -exported_symbols_list linker flag... yes
2197:info:configure checking for -force_load linker flag... yes
2198:info:configure checking how to run the C preprocessor... /usr/bin/clang -E
2199:info:configure checking for ANSI C header files... yes
2200:info:configure checking for sys/types.h... yes
2201:info:configure checking for sys/stat.h... yes
2202:info:configure checking for stdlib.h... yes
2203:info:configure checking for string.h... yes
2204:info:configure checking for memory.h... yes
2205:info:configure checking for strings.h... yes
2206:info:configure checking for inttypes.h... yes
2207:info:configure checking for stdint.h... yes
2208:info:configure checking for unistd.h... yes
2209:info:configure checking for dlfcn.h... yes
2210:info:configure checking for objdir... .libs
2211:info:configure checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
2212:info:configure checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
2213:info:configure checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
2214:info:configure checking if /usr/bin/clang static flag -static works... no
2215:info:configure checking if /usr/bin/clang supports -c -o file.o... yes
2216:info:configure checking if /usr/bin/clang supports -c -o file.o... (cached) yes
2217:info:configure checking whether the /usr/bin/clang linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
2218:info:configure checking dynamic linker characteristics... darwin17.0.0 dyld
2219:info:configure checking how to hardcode library paths into programs... immediate
2220:info:configure checking whether stripping libraries is possible... yes
2221:info:configure checking if libtool supports shared libraries... yes
2222:info:configure checking whether to build shared libraries... yes
2223:info:configure checking whether to build static libraries... yes
2224:info:configure checking whether make sets $(MAKE)... (cached) yes
2225:info:configure checking for ld... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
2226:info:configure checking for sed... (cached) /usr/bin/sed
2227:info:configure checking for sendmail... /usr/sbin/sendmail
2228:info:configure checking for perl... /opt/local/bin/perl
2229:info:configure checking for python... /usr/bin/python
2230:info:configure checking for python3... (cached) /usr/bin/python
2231:info:configure checking for convert... no
2232:info:configure checking for gs... /opt/local/bin/gs
2233:info:configure checking for xml2-config... /opt/local/bin/xml2-config
2234:info:configure checking for xslt-config... /opt/local/bin/xslt-config
2235:info:configure checking for ant... no
2236:info:configure checking for isnan, sqrt, log, exp, fabs, pow, floor, ceil in -lm... no
2237:info:configure configure: WARNING: Math library not found
2238:info:configure checking for compress in -lz... yes
2239:info:configure checking for ANSI C header files... (cached) yes
2240:info:configure checking for sys/wait.h that is POSIX.1 compatible... yes
2241:info:configure checking arpa/inet.h usability... yes
2242:info:configure checking arpa/inet.h presence... yes
2243:info:configure checking for arpa/inet.h... yes
2244:info:configure checking ctype.h usability... yes
2245:info:configure checking ctype.h presence... yes
2246:info:configure checking for ctype.h... yes
2247:info:configure checking fcntl.h usability... yes
2248:info:configure checking fcntl.h presence... yes
2249:info:configure checking for fcntl.h... yes
2250:info:configure checking limits.h usability... yes
2251:info:configure checking limits.h presence... yes
2252:info:configure checking for limits.h... yes
2253:info:configure checking netdb.h usability... yes
2254:info:configure checking netdb.h presence... yes
2255:info:configure checking for netdb.h... yes
2256:info:configure checking netinet/in.h usability... yes
2257:info:configure checking netinet/in.h presence... yes
2258:info:configure checking for netinet/in.h... yes
2259:info:configure checking for stdlib.h... (cached) yes
2260:info:configure checking for string.h... (cached) yes
2261:info:configure checking for strings.h... (cached) yes
2262:info:configure checking sys/socket.h usability... yes
2263:info:configure checking sys/socket.h presence... yes
2264:info:configure checking for sys/socket.h... yes
2265:info:configure checking sys/time.h usability... yes
2266:info:configure checking sys/time.h presence... yes
2267:info:configure checking for sys/time.h... yes
2268:info:configure checking for unistd.h... (cached) yes
2269:info:configure checking for an ANSI C-conforming const... yes
2270:info:configure checking for stdbool.h that conforms to C99... yes
2271:info:configure checking for _Bool... yes
2272:info:configure checking for pid_t... yes
2273:info:configure checking for size_t... yes
2274:info:configure checking vfork.h usability... no
2275:info:configure checking vfork.h presence... no
2276:info:configure checking for vfork.h... no
2277:info:configure checking for fork... yes
2278:info:configure checking for vfork... yes
2279:info:configure checking for working fork... yes
2280:info:configure checking for working vfork... (cached) yes
2281:info:configure checking for stdlib.h... (cached) yes
2282:info:configure checking for GNU libc compatible malloc... yes
2283:info:configure checking for stdlib.h... (cached) yes
2284:info:configure checking for GNU libc compatible realloc... yes
2285:info:configure checking return type of signal handlers... void
2286:info:configure checking whether lstat correctly handles trailing slash... no
2287:info:configure checking whether stat accepts an empty string... no
2288:info:configure checking for floor... yes
2289:info:configure checking for getcwd... yes
2290:info:configure checking for gethostbyname... yes
2291:info:configure checking for isascii... yes
2292:info:configure checking for memset... yes
2293:info:configure checking for pow... yes
2294:info:configure checking for rint... yes
2295:info:configure checking for socket... yes
2296:info:configure checking for sqrt... yes
2297:info:configure checking for strchr... yes
2298:info:configure checking for strcspn... yes
2299:info:configure checking for strdup... yes
2300:info:configure checking for strspn... yes
2301:info:configure checking for strstr... yes
2302:info:configure checking for strlcpy... yes
2303:info:configure getconf: no such configuration parameter `LFS_CFLAGS'
2304:info:configure Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
2305:info:configure checking for mpicc... no
2306:info:configure checking for openmpicc... no
2307:info:configure checking for mpcc... no
2308:info:configure checking for mpirun... no
2309:info:configure checking for openmpirun... no
2310:info:configure checking for python3... no
2311:info:configure checking for convert... no
2312:info:configure checking that generated files are newer than configure... done
2313:info:configure configure: creating ./config.status
2314:info:configure config.status: creating Makefile
2315:info:configure config.status: creating doc/Makefile
2316:info:configure config.status: creating doc/css/Makefile
2317:info:configure config.status: creating doc/examples/Makefile
2318:info:configure config.status: creating doc/examples/compute_prior_dist_example_output_files/Makefile
2319:info:configure config.status: creating doc/examples/sample_opal_scripts/Makefile
2320:info:configure config.status: creating doc/images/Makefile
2321:info:configure config.status: creating doc/js/Makefile
2322:info:configure config.status: creating etc/Makefile
2323:info:configure config.status: creating src/filters/Makefile
2324:info:configure config.status: creating src/filters/purge/Makefile
2325:info:configure config.status: creating src/filters/dust/Makefile
2326:info:configure config.status: creating scripts/Makefile
2327:info:configure config.status: creating src/Makefile
2328:info:configure config.status: creating src/libxml2/Makefile
2329:info:configure config.status: creating src/libxml2/include/Makefile
2330:info:configure config.status: creating src/libxml2/include/libxml/Makefile
2331:info:configure config.status: creating src/libxslt/Makefile
2332:info:configure config.status: creating src/libexslt/Makefile
2333:info:configure config.status: creating src/parallel/Makefile
2334:info:configure config.status: creating tests/Makefile
2335:info:configure config.status: creating tests/ame/Makefile
2336:info:configure config.status: creating tests/centrimo/Makefile
2337:info:configure config.status: creating tests/clustalw2fasta/Makefile
2338:info:configure config.status: creating tests/common/Makefile
2339:info:configure config.status: creating tests/common/motif.crp0/Makefile
2340:info:configure config.status: creating tests/common/motif.Puf3p/Makefile
2341:info:configure config.status: creating tests/create-priors/Makefile
2342:info:configure config.status: creating tests/draw-mhmm/Makefile
2343:info:configure config.status: creating tests/dreme/Makefile
2344:info:configure config.status: creating tests/fasta-center/Makefile
2345:info:configure config.status: creating tests/fimo/Makefile
2346:info:configure config.status: creating tests/glam2/Makefile
2347:info:configure config.status: creating tests/glam2scan/Makefile
2348:info:configure config.status: creating tests/gomo/Makefile
2349:info:configure config.status: creating tests/mast/Makefile
2350:info:configure config.status: creating tests/mcast/Makefile
2351:info:configure config.status: creating tests/meme/Makefile
2352:info:configure config.status: creating tests/meme-chip/Makefile
2353:info:configure config.status: creating tests/mhmm/Makefile
2354:info:configure config.status: creating tests/mhmms/Makefile
2355:info:configure config.status: creating tests/mhmmscan/Makefile
2356:info:configure config.status: creating tests/momo/Makefile
2357:info:configure config.status: creating tests/motiph/Makefile
2358:info:configure config.status: creating tests/psp-gen/Makefile
2359:info:configure config.status: creating tests/qvalue/Makefile
2360:info:configure config.status: creating tests/scaffold/Makefile
2361:info:configure config.status: creating tests/spamo/Makefile
2362:info:configure config.status: creating tests/scripts/Makefile
2363:info:configure config.status: creating tests/tomtom/Makefile
2364:info:configure config.status: creating tests/web/Makefile
2365:info:configure config.status: creating config.h
2366:info:configure config.status: linking doc/js/simple-shared-doc.js to etc/doc/js/simple-shared-doc.js
2367:info:configure config.status: executing depfiles commands
2368:info:configure config.status: executing libtool commands
2369:info:configure configure: WARNING:     
2370:info:configure Checking Required Perl Modules:
2371:info:configure XML::Compile::SOAP11 missing. Used for downloading sequence databases from RSAT
2372:info:configure XML::Compile::WSDL11 missing. Used for downloading sequence databases from RSAT
2373:info:configure XML::Compile::Transport::SOAPHTTP missing. Used for downloading sequence databases from RSAT
2374:info:configure Checking Optional Modules:   
2375:info:configure         ========================
2376:info:configure         Configuration parameters
2377:info:configure         ========================
2378:info:configure   Install path:               /opt/local
2379:info:configure   Install UID:               
2380:info:configure   Version:                    4.12.1
2381:info:configure   C compiler:                 /usr/bin/clang
2382:info:configure   C compiler flags:           -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3
2383:info:configure   Linker:                     /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
2384:info:configure   Special Libs:               -lz
2385:info:configure   MPICC                       /usr/bin/clang
2386:info:configure   MPIRUN                     
2387:info:configure   MPI_CMD                     
2388:info:configure   MPIINC                     
2389:info:configure   MPILIBDIR                   
2390:info:configure   MPIFLAGS                   
2391:info:configure   MEME URL:                   
2392:info:configure   PREVIOUS VERSION URL:       
2393:info:configure   SERVER CONTACT:             
2394:info:configure   DEVELOPER CONTACT:          meme-suite@uw.edu
2395:info:configure   GO-SERVER URL:              http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID
2396:info:configure   PERL:                       /opt/local/bin/perl5.24
2397:info:configure   PYTHON:                     /opt/local/bin/python2.7
2398:info:configure   PYTHON3:                   
2399:info:configure   CONVERT:                   
2400:info:configure   GHOSTSCRIPT:                /opt/local/bin/gs
2401:info:configure   BUILD LIBXML2:              no
2402:info:configure   LIBXML2 compiler flags:     -I/opt/local/include/libxml2
2403:info:configure   LIBXML2 libs:               -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm
2404:info:configure   BUILD LIBXSLT:              no
2405:info:configure   LIBXSLT compiler flags:     -I/opt/local/include -I/opt/local/include/libxml2
2406:info:configure   LIBXSLT libs:               -L/opt/local/lib -lxslt -lxml2 -lz -llzma -lpthread -liconv -lm -lexslt
2407:info:configure   MEME DB:                    ${datarootdir}/${PACKAGE_NAME}-4.12.1/db
2408:info:configure   MEME LOGS:                  ${localstatedir}/${PACKAGE_NAME}-4.12.1/LOGS
2409:info:configure   MEME TEMP FILES:           
2410:info:configure   OPAL URL:                   no
2411:info:configure   OPAL DEPLOY DIRECTORY:     
2412:info:configure   Run the following commands to compile, test and install meme:
2413:info:configure         make
2414:info:configure         make test
2415:info:configure         make install
2416:debug:configure Privilege de-escalation not attempted as not running as root.
2417:debug:build build phase started at Thu Oct 12 17:43:13 PDT 2017
2418:notice:build --->  Building memesuite
2419:debug:build Executing org.macports.build (memesuite)
2420:debug:build Environment:
2421:debug:build CC_PRINT_OPTIONS='YES'
2422:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/.CC_PRINT_OPTIONS'
2423:debug:build CPATH='/opt/local/include'
2424:debug:build LIBRARY_PATH='/opt/local/lib'
2425:debug:build MACOSX_DEPLOYMENT_TARGET='10.13'
2426:info:build Executing:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && /usr/bin/make -j16 -w all
2427:debug:build system:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && /usr/bin/make -j16 -w all
2428:info:build make: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
2429:info:build /usr/bin/sed -e 's%@catalina.home@%%' -e 's%@version@%4.12.1%' -e 's%@site.url@%%' -e 's%@site.services@%no%' -e 's%@site.DN@%%' -e 's%@site.contact@%%' -e 's%@developer.contact@%meme-suite@uw.edu%' -e 's%@expiry@%4%' -e 's%@bin.dir@%/opt/local/bin%' -e 's%@etc.dir@%/opt/local/etc%' -e 's%@lib.dir@%/opt/local/lib%' -e 's%@db.dir@%/opt/local/share/meme-4.12.1/db%' -e 's%@sendmail@%/usr/sbin/sendmail%' -e 's%@quota@%%' MemeSuite.properties.in > MemeSuite.properties
2430:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-recursive
2431:info:build make[1]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
2432:info:build Making all in src
2433:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
2434:info:build echo '#define MEME_DIR "/opt/local"' >dir.h
2435:info:build echo '#define REVISION "7bc036d2e0d7b7cd63f6894d8593c1578ced0596"' > projrel.h
2436:info:build echo '#define DATA_DIR "/opt/local/share/meme-4.12.1" ' >> dir.h 
2437:info:build echo '#define ARCHIVE_DATE "Thu Oct 12 13:33:47 2017 -0700"' >> projrel.h
2438:info:build echo '#define BIN_DIR "/opt/local/bin" ' >> dir.h
2439:info:build echo '#define TEMP_DIR "" ' >> dir.h
2440:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-recursive
2441:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
2442:info:build Making all in filters
2443:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters'
2444:info:build Making all in purge
2445:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters/purge'
2446:info:build depbase=`echo afnio.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2447:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT afnio.o -MD -MP -MF $depbase.Tpo -c -o afnio.o afnio.c &&\
2448:info:build     mv -f $depbase.Tpo $depbase.Po
2449:info:build depbase=`echo alphabet.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2450:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT alphabet.o -MD -MP -MF $depbase.Tpo -c -o alphabet.o alphabet.c &&\
2451:info:build     mv -f $depbase.Tpo $depbase.Po
2452:info:build depbase=`echo block.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2453:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT block.o -MD -MP -MF $depbase.Tpo -c -o block.o block.c &&\
2454:info:build     mv -f $depbase.Tpo $depbase.Po
2455:info:build depbase=`echo dheap.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2456:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT dheap.o -MD -MP -MF $depbase.Tpo -c -o dheap.o dheap.c &&\
2457:info:build     mv -f $depbase.Tpo $depbase.Po
2458:info:build depbase=`echo gblast.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2459:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gblast.o -MD -MP -MF $depbase.Tpo -c -o gblast.o gblast.c &&\
2460:info:build     mv -f $depbase.Tpo $depbase.Po
2461:info:build depbase=`echo karlin.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2462:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT karlin.o -MD -MP -MF $depbase.Tpo -c -o karlin.o karlin.c &&\
2463:info:build     mv -f $depbase.Tpo $depbase.Po
2464:info:build depbase=`echo mheap.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2465:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mheap.o -MD -MP -MF $depbase.Tpo -c -o mheap.o mheap.c &&\
2466:info:build     mv -f $depbase.Tpo $depbase.Po
2467:info:build depbase=`echo mlist.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2468:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mlist.o -MD -MP -MF $depbase.Tpo -c -o mlist.o mlist.c &&\
2469:info:build     mv -f $depbase.Tpo $depbase.Po
2470:info:build depbase=`echo pairaln.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2471:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT pairaln.o -MD -MP -MF $depbase.Tpo -c -o pairaln.o pairaln.c &&\
2472:info:build     mv -f $depbase.Tpo $depbase.Po
2473:info:build depbase=`echo pmain.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2474:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT pmain.o -MD -MP -MF $depbase.Tpo -c -o pmain.o pmain.c &&\
2475:info:build     mv -f $depbase.Tpo $depbase.Po
2476:info:build depbase=`echo purge.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2477:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT purge.o -MD -MP -MF $depbase.Tpo -c -o purge.o purge.c &&\
2478:info:build     mv -f $depbase.Tpo $depbase.Po
2479:info:build depbase=`echo random.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2480:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT random.o -MD -MP -MF $depbase.Tpo -c -o random.o random.c &&\
2481:info:build     mv -f $depbase.Tpo $depbase.Po
2482:info:build depbase=`echo seqset.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2483:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT seqset.o -MD -MP -MF $depbase.Tpo -c -o seqset.o seqset.c &&\
2484:info:build     mv -f $depbase.Tpo $depbase.Po
2485:info:build depbase=`echo sequence.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2486:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT sequence.o -MD -MP -MF $depbase.Tpo -c -o sequence.o sequence.c &&\
2487:info:build     mv -f $depbase.Tpo $depbase.Po
2488:info:build /bin/sh ../../../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o -lm -lz
2489:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o  -L/opt/local/lib -lm -lz
2490:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters/purge'
2491:info:build Making all in dust
2492:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters/dust'
2493:info:build depbase=`echo tust.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2494:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT tust.o -MD -MP -MF $depbase.Tpo -c -o tust.o tust.c &&\
2495:info:build     mv -f $depbase.Tpo $depbase.Po
2496:info:build depbase=`echo dust.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2497:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT dust.o -MD -MP -MF $depbase.Tpo -c -o dust.o dust.c &&\
2498:info:build     mv -f $depbase.Tpo $depbase.Po
2499:info:build depbase=`echo getfa.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2500:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I../../..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT getfa.o -MD -MP -MF $depbase.Tpo -c -o getfa.o getfa.c &&\
2501:info:build     mv -f $depbase.Tpo $depbase.Po
2502:info:build /bin/sh ../../../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o dust tust.o dust.o getfa.o  -lz
2503:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o dust tust.o dust.o getfa.o  -L/opt/local/lib -lz
2504:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters/dust'
2505:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters'
2506:info:build make[5]: Nothing to be done for `all-am'.
2507:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters'
2508:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/filters'
2509:info:build Making all in libxml2
2510:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxml2'
2511:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxml2'
2512:info:build make[5]: Nothing to be done for `all-am'.
2513:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxml2'
2514:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxml2'
2515:info:build Making all in libxslt
2516:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxslt'
2517:info:build make[4]: Nothing to be done for `all'.
2518:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libxslt'
2519:info:build Making all in libexslt
2520:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libexslt'
2521:info:build make[4]: Nothing to be done for `all'.
2522:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/libexslt'
2523:info:build Making all in .
2524:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
2525:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c -o libcommon_la-alignment.lo `test -f 'alignment.c' || echo './'`alignment.c
2526:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c -o libcommon_la-alph-in.lo `test -f 'alph-in.c' || echo './'`alph-in.c
2527:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c -o libcommon_la-alphabet.lo `test -f 'alphabet.c' || echo './'`alphabet.c
2528:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c -o libcommon_la-array.lo `test -f 'array.c' || echo './'`array.c
2529:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c -o libcommon_la-array-list.lo `test -f 'array-list.c' || echo './'`array-list.c
2530:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c -o libcommon_la-binary-search.lo `test -f 'binary-search.c' || echo './'`binary-search.c
2531:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c -o libcommon_la-binomial.lo `test -f 'binomial.c' || echo './'`binomial.c
2532:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c -o libcommon_la-build-hmm.lo `test -f 'build-hmm.c' || echo './'`build-hmm.c
2533:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c -o libcommon_la-buffer.lo `test -f 'buffer.c' || echo './'`buffer.c
2534:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c -o libcommon_la-ceqlogo.lo `test -f 'ceqlogo.c' || echo './'`ceqlogo.c
2535:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c -o libcommon_la-cisml.lo `test -f 'cisml.c' || echo './'`cisml.c
2536:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-cisml-sax.lo -MD -MP -MF .deps/libcommon_la-cisml-sax.Tpo -c -o libcommon_la-cisml-sax.lo `test -f 'cisml-sax.c' || echo './'`cisml-sax.c
2537:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-clustalw-io.lo -MD -MP -MF .deps/libcommon_la-clustalw-io.Tpo -c -o libcommon_la-clustalw-io.lo `test -f 'clustalw-io.c' || echo './'`clustalw-io.c
2538:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-dp.lo -MD -MP -MF .deps/libcommon_la-dp.Tpo -c -o libcommon_la-dp.lo `test -f 'dp.c' || echo './'`dp.c
2539:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-dreme-sax.lo -MD -MP -MF .deps/libcommon_la-dreme-sax.Tpo -c -o libcommon_la-dreme-sax.lo `test -f 'dreme-sax.c' || echo './'`dreme-sax.c
2540:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-eps2png.lo -MD -MP -MF .deps/libcommon_la-eps2png.Tpo -c -o libcommon_la-eps2png.lo `test -f 'eps2png.c' || echo './'`eps2png.c
2541:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c alphabet.c  -fno-common -DPIC -o .libs/libcommon_la-alphabet.o
2542:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c array-list.c  -fno-common -DPIC -o .libs/libcommon_la-array-list.o
2543:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c alignment.c  -fno-common -DPIC -o .libs/libcommon_la-alignment.o
2544:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c alph-in.c  -fno-common -DPIC -o .libs/libcommon_la-alph-in.o
2545:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c array.c  -fno-common -DPIC -o .libs/libcommon_la-array.o
2546:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c build-hmm.c  -fno-common -DPIC -o .libs/libcommon_la-build-hmm.o
2547:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c binary-search.c  -fno-common -DPIC -o .libs/libcommon_la-binary-search.o
2548:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c  -fno-common -DPIC -o .libs/libcommon_la-ceqlogo.o
2549:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c cisml.c  -fno-common -DPIC -o .libs/libcommon_la-cisml.o
2550:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-dreme-sax.lo -MD -MP -MF .deps/libcommon_la-dreme-sax.Tpo -c dreme-sax.c  -fno-common -DPIC -o .libs/libcommon_la-dreme-sax.o
2551:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-dp.lo -MD -MP -MF .deps/libcommon_la-dp.Tpo -c dp.c  -fno-common -DPIC -o .libs/libcommon_la-dp.o
2552:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c buffer.c  -fno-common -DPIC -o .libs/libcommon_la-buffer.o
2553:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c binomial.c  -fno-common -DPIC -o .libs/libcommon_la-binomial.o
2554:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml-sax.lo -MD -MP -MF .deps/libcommon_la-cisml-sax.Tpo -c cisml-sax.c  -fno-common -DPIC -o .libs/libcommon_la-cisml-sax.o
2555:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-clustalw-io.lo -MD -MP -MF .deps/libcommon_la-clustalw-io.Tpo -c clustalw-io.c  -fno-common -DPIC -o .libs/libcommon_la-clustalw-io.o
2556:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-eps2png.lo -MD -MP -MF .deps/libcommon_la-eps2png.Tpo -c eps2png.c  -fno-common -DPIC -o .libs/libcommon_la-eps2png.o
2557:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binary-search.lo -MD -MP -MF .deps/libcommon_la-binary-search.Tpo -c binary-search.c -o libcommon_la-binary-search.o >/dev/null 2>&1
2558:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-binomial.lo -MD -MP -MF .deps/libcommon_la-binomial.Tpo -c binomial.c -o libcommon_la-binomial.o >/dev/null 2>&1
2559:info:build mv -f .deps/libcommon_la-binary-search.Tpo .deps/libcommon_la-binary-search.Plo
2560:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-empirical-qvalue.lo -MD -MP -MF .deps/libcommon_la-empirical-qvalue.Tpo -c -o libcommon_la-empirical-qvalue.lo `test -f 'empirical-qvalue.c' || echo './'`empirical-qvalue.c
2561:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-eps2png.lo -MD -MP -MF .deps/libcommon_la-eps2png.Tpo -c eps2png.c -o libcommon_la-eps2png.o >/dev/null 2>&1
2562:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-clustalw-io.lo -MD -MP -MF .deps/libcommon_la-clustalw-io.Tpo -c clustalw-io.c -o libcommon_la-clustalw-io.o >/dev/null 2>&1
2563:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array-list.lo -MD -MP -MF .deps/libcommon_la-array-list.Tpo -c array-list.c -o libcommon_la-array-list.o >/dev/null 2>&1
2564:info:build mv -f .deps/libcommon_la-binomial.Tpo .deps/libcommon_la-binomial.Plo
2565:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-evomodel.lo -MD -MP -MF .deps/libcommon_la-evomodel.Tpo -c -o libcommon_la-evomodel.lo `test -f 'evomodel.c' || echo './'`evomodel.c
2566:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml-sax.lo -MD -MP -MF .deps/libcommon_la-cisml-sax.Tpo -c cisml-sax.c -o libcommon_la-cisml-sax.o >/dev/null 2>&1
2567:info:build mv -f .deps/libcommon_la-eps2png.Tpo .deps/libcommon_la-eps2png.Plo
2568:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-fasta-io.lo -MD -MP -MF .deps/libcommon_la-fasta-io.Tpo -c -o libcommon_la-fasta-io.lo `test -f 'fasta-io.c' || echo './'`fasta-io.c
2569:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-empirical-qvalue.lo -MD -MP -MF .deps/libcommon_la-empirical-qvalue.Tpo -c empirical-qvalue.c  -fno-common -DPIC -o .libs/libcommon_la-empirical-qvalue.o
2570:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-buffer.lo -MD -MP -MF .deps/libcommon_la-buffer.Tpo -c buffer.c -o libcommon_la-buffer.o >/dev/null 2>&1
2571:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-dreme-sax.lo -MD -MP -MF .deps/libcommon_la-dreme-sax.Tpo -c dreme-sax.c -o libcommon_la-dreme-sax.o >/dev/null 2>&1
2572:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-dp.lo -MD -MP -MF .deps/libcommon_la-dp.Tpo -c dp.c -o libcommon_la-dp.o >/dev/null 2>&1
2573:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alignment.lo -MD -MP -MF .deps/libcommon_la-alignment.Tpo -c alignment.c -o libcommon_la-alignment.o >/dev/null 2>&1
2574:info:build mv -f .deps/libcommon_la-clustalw-io.Tpo .deps/libcommon_la-clustalw-io.Plo
2575:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-fitevd.lo -MD -MP -MF .deps/libcommon_la-fitevd.Tpo -c -o libcommon_la-fitevd.lo `test -f 'fitevd.c' || echo './'`fitevd.c
2576:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-evomodel.lo -MD -MP -MF .deps/libcommon_la-evomodel.Tpo -c evomodel.c  -fno-common -DPIC -o .libs/libcommon_la-evomodel.o
2577:info:build mv -f .deps/libcommon_la-array-list.Tpo .deps/libcommon_la-array-list.Plo
2578:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-empirical-qvalue.lo -MD -MP -MF .deps/libcommon_la-empirical-qvalue.Tpo -c empirical-qvalue.c -o libcommon_la-empirical-qvalue.o >/dev/null 2>&1
2579:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-build-hmm.lo -MD -MP -MF .deps/libcommon_la-build-hmm.Tpo -c build-hmm.c -o libcommon_la-build-hmm.o >/dev/null 2>&1
2580:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-gendb.lo -MD -MP -MF .deps/libcommon_la-gendb.Tpo -c -o libcommon_la-gendb.lo `test -f 'gendb.c' || echo './'`gendb.c
2581:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-fasta-io.lo -MD -MP -MF .deps/libcommon_la-fasta-io.Tpo -c fasta-io.c  -fno-common -DPIC -o .libs/libcommon_la-fasta-io.o
2582:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ceqlogo.lo -MD -MP -MF .deps/libcommon_la-ceqlogo.Tpo -c ceqlogo.c -o libcommon_la-ceqlogo.o >/dev/null 2>&1
2583:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alph-in.lo -MD -MP -MF .deps/libcommon_la-alph-in.Tpo -c alph-in.c -o libcommon_la-alph-in.o >/dev/null 2>&1
2584:info:build mv -f .deps/libcommon_la-cisml-sax.Tpo .deps/libcommon_la-cisml-sax.Plo
2585:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-hash_table.lo -MD -MP -MF .deps/libcommon_la-hash_table.Tpo -c -o libcommon_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c
2586:info:build mv -f .deps/libcommon_la-empirical-qvalue.Tpo .deps/libcommon_la-empirical-qvalue.Plo
2587:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-array.lo -MD -MP -MF .deps/libcommon_la-array.Tpo -c array.c -o libcommon_la-array.o >/dev/null 2>&1
2588:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-heap.lo -MD -MP -MF .deps/libcommon_la-heap.Tpo -c -o libcommon_la-heap.lo `test -f 'heap.c' || echo './'`heap.c
2589:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-fitevd.lo -MD -MP -MF .deps/libcommon_la-fitevd.Tpo -c fitevd.c  -fno-common -DPIC -o .libs/libcommon_la-fitevd.o
2590:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-gendb.lo -MD -MP -MF .deps/libcommon_la-gendb.Tpo -c gendb.c  -fno-common -DPIC -o .libs/libcommon_la-gendb.o
2591:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-fasta-io.lo -MD -MP -MF .deps/libcommon_la-fasta-io.Tpo -c fasta-io.c -o libcommon_la-fasta-io.o >/dev/null 2>&1
2592:info:build mv -f .deps/libcommon_la-buffer.Tpo .deps/libcommon_la-buffer.Plo
2593:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-html-data.lo -MD -MP -MF .deps/libcommon_la-html-data.Tpo -c -o libcommon_la-html-data.lo `test -f 'html-data.c' || echo './'`html-data.c
2594:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-hash_table.lo -MD -MP -MF .deps/libcommon_la-hash_table.Tpo -c hash_table.c  -fno-common -DPIC -o .libs/libcommon_la-hash_table.o
2595:info:build mv -f .deps/libcommon_la-dp.Tpo .deps/libcommon_la-dp.Plo
2596:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-html-monolith.lo -MD -MP -MF .deps/libcommon_la-html-monolith.Tpo -c -o libcommon_la-html-monolith.lo `test -f 'html-monolith.c' || echo './'`html-monolith.c
2597:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-evomodel.lo -MD -MP -MF .deps/libcommon_la-evomodel.Tpo -c evomodel.c -o libcommon_la-evomodel.o >/dev/null 2>&1
2598:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-heap.lo -MD -MP -MF .deps/libcommon_la-heap.Tpo -c heap.c  -fno-common -DPIC -o .libs/libcommon_la-heap.o
2599:info:build mv -f .deps/libcommon_la-dreme-sax.Tpo .deps/libcommon_la-dreme-sax.Plo
2600:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-io.lo -MD -MP -MF .deps/libcommon_la-io.Tpo -c -o libcommon_la-io.lo `test -f 'io.c' || echo './'`io.c
2601:info:build mv -f .deps/libcommon_la-alignment.Tpo .deps/libcommon_la-alignment.Plo
2602:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-json-checker.lo -MD -MP -MF .deps/libcommon_la-json-checker.Tpo -c -o libcommon_la-json-checker.lo `test -f 'json-checker.c' || echo './'`json-checker.c
2603:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-gendb.lo -MD -MP -MF .deps/libcommon_la-gendb.Tpo -c gendb.c -o libcommon_la-gendb.o >/dev/null 2>&1
2604:info:build mv -f .deps/libcommon_la-fasta-io.Tpo .deps/libcommon_la-fasta-io.Plo
2605:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-html-data.lo -MD -MP -MF .deps/libcommon_la-html-data.Tpo -c html-data.c  -fno-common -DPIC -o .libs/libcommon_la-html-data.o
2606:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-cisml.lo -MD -MP -MF .deps/libcommon_la-cisml.Tpo -c cisml.c -o libcommon_la-cisml.o >/dev/null 2>&1
2607:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-json-reader.lo -MD -MP -MF .deps/libcommon_la-json-reader.Tpo -c -o libcommon_la-json-reader.lo `test -f 'json-reader.c' || echo './'`json-reader.c
2608:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-hash_table.lo -MD -MP -MF .deps/libcommon_la-hash_table.Tpo -c hash_table.c -o libcommon_la-hash_table.o >/dev/null 2>&1
2609:info:build mv -f .deps/libcommon_la-ceqlogo.Tpo .deps/libcommon_la-ceqlogo.Plo
2610:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-json-writer.lo -MD -MP -MF .deps/libcommon_la-json-writer.Tpo -c -o libcommon_la-json-writer.lo `test -f 'json-writer.c' || echo './'`json-writer.c
2611:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-html-monolith.lo -MD -MP -MF .deps/libcommon_la-html-monolith.Tpo -c html-monolith.c  -fno-common -DPIC -o .libs/libcommon_la-html-monolith.o
2612:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-heap.lo -MD -MP -MF .deps/libcommon_la-heap.Tpo -c heap.c -o libcommon_la-heap.o >/dev/null 2>&1
2613:info:build mv -f .deps/libcommon_la-build-hmm.Tpo .deps/libcommon_la-build-hmm.Plo
2614:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-karlin.lo -MD -MP -MF .deps/libcommon_la-karlin.Tpo -c -o libcommon_la-karlin.lo `test -f 'karlin.c' || echo './'`karlin.c
2615:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-io.lo -MD -MP -MF .deps/libcommon_la-io.Tpo -c io.c  -fno-common -DPIC -o .libs/libcommon_la-io.o
2616:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-checker.lo -MD -MP -MF .deps/libcommon_la-json-checker.Tpo -c json-checker.c  -fno-common -DPIC -o .libs/libcommon_la-json-checker.o
2617:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-reader.lo -MD -MP -MF .deps/libcommon_la-json-reader.Tpo -c json-reader.c  -fno-common -DPIC -o .libs/libcommon_la-json-reader.o
2618:info:build mv -f .deps/libcommon_la-alph-in.Tpo .deps/libcommon_la-alph-in.Plo
2619:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-linked-list.lo -MD -MP -MF .deps/libcommon_la-linked-list.Tpo -c -o libcommon_la-linked-list.lo `test -f 'linked-list.c' || echo './'`linked-list.c
2620:info:build mv -f .deps/libcommon_la-hash_table.Tpo .deps/libcommon_la-hash_table.Plo
2621:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-io.lo -MD -MP -MF .deps/libcommon_la-io.Tpo -c io.c -o libcommon_la-io.o >/dev/null 2>&1
2622:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-log-hmm.lo -MD -MP -MF .deps/libcommon_la-log-hmm.Tpo -c -o libcommon_la-log-hmm.lo `test -f 'log-hmm.c' || echo './'`log-hmm.c
2623:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-writer.lo -MD -MP -MF .deps/libcommon_la-json-writer.Tpo -c json-writer.c  -fno-common -DPIC -o .libs/libcommon_la-json-writer.o
2624:info:build mv -f .deps/libcommon_la-gendb.Tpo .deps/libcommon_la-gendb.Plo
2625:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-html-monolith.lo -MD -MP -MF .deps/libcommon_la-html-monolith.Tpo -c html-monolith.c -o libcommon_la-html-monolith.o >/dev/null 2>&1
2626:info:build mv -f .deps/libcommon_la-heap.Tpo .deps/libcommon_la-heap.Plo
2627:info:build mv -f .deps/libcommon_la-evomodel.Tpo .deps/libcommon_la-evomodel.Plo
2628:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-logodds.lo -MD -MP -MF .deps/libcommon_la-logodds.Tpo -c -o libcommon_la-logodds.lo `test -f 'logodds.c' || echo './'`logodds.c
2629:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mast-util.lo -MD -MP -MF .deps/libcommon_la-mast-util.Tpo -c -o libcommon_la-mast-util.lo `test -f 'mast-util.c' || echo './'`mast-util.c
2630:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-match.lo -MD -MP -MF .deps/libcommon_la-match.Tpo -c -o libcommon_la-match.lo `test -f 'match.c' || echo './'`match.c
2631:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-karlin.lo -MD -MP -MF .deps/libcommon_la-karlin.Tpo -c karlin.c  -fno-common -DPIC -o .libs/libcommon_la-karlin.o
2632:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-alphabet.lo -MD -MP -MF .deps/libcommon_la-alphabet.Tpo -c alphabet.c -o libcommon_la-alphabet.o >/dev/null 2>&1
2633:info:build mv -f .deps/libcommon_la-io.Tpo .deps/libcommon_la-io.Plo
2634:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-html-data.lo -MD -MP -MF .deps/libcommon_la-html-data.Tpo -c html-data.c -o libcommon_la-html-data.o >/dev/null 2>&1
2635:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-matrix.lo -MD -MP -MF .deps/libcommon_la-matrix.Tpo -c -o libcommon_la-matrix.lo `test -f 'matrix.c' || echo './'`matrix.c
2636:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-linked-list.lo -MD -MP -MF .deps/libcommon_la-linked-list.Tpo -c linked-list.c  -fno-common -DPIC -o .libs/libcommon_la-linked-list.o
2637:info:build mv -f .deps/libcommon_la-array.Tpo .deps/libcommon_la-array.Plo
2638:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mcast-match.lo -MD -MP -MF .deps/libcommon_la-mcast-match.Tpo -c -o libcommon_la-mcast-match.lo `test -f 'mcast-match.c' || echo './'`mcast-match.c
2639:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-log-hmm.lo -MD -MP -MF .deps/libcommon_la-log-hmm.Tpo -c log-hmm.c  -fno-common -DPIC -o .libs/libcommon_la-log-hmm.o
2640:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-logodds.lo -MD -MP -MF .deps/libcommon_la-logodds.Tpo -c logodds.c  -fno-common -DPIC -o .libs/libcommon_la-logodds.o
2641:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mast-util.lo -MD -MP -MF .deps/libcommon_la-mast-util.Tpo -c mast-util.c  -fno-common -DPIC -o .libs/libcommon_la-mast-util.o
2642:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-match.lo -MD -MP -MF .deps/libcommon_la-match.Tpo -c match.c  -fno-common -DPIC -o .libs/libcommon_la-match.o
2643:info:build mv -f .deps/libcommon_la-html-monolith.Tpo .deps/libcommon_la-html-monolith.Plo
2644:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-meme-sax.lo -MD -MP -MF .deps/libcommon_la-meme-sax.Tpo -c -o libcommon_la-meme-sax.lo `test -f 'meme-sax.c' || echo './'`meme-sax.c
2645:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-karlin.lo -MD -MP -MF .deps/libcommon_la-karlin.Tpo -c karlin.c -o libcommon_la-karlin.o >/dev/null 2>&1
2646:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-checker.lo -MD -MP -MF .deps/libcommon_la-json-checker.Tpo -c json-checker.c -o libcommon_la-json-checker.o >/dev/null 2>&1
2647:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-matrix.lo -MD -MP -MF .deps/libcommon_la-matrix.Tpo -c matrix.c  -fno-common -DPIC -o .libs/libcommon_la-matrix.o
2648:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-writer.lo -MD -MP -MF .deps/libcommon_la-json-writer.Tpo -c json-writer.c -o libcommon_la-json-writer.o >/dev/null 2>&1
2649:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-linked-list.lo -MD -MP -MF .deps/libcommon_la-linked-list.Tpo -c linked-list.c -o libcommon_la-linked-list.o >/dev/null 2>&1
2650:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-fitevd.lo -MD -MP -MF .deps/libcommon_la-fitevd.Tpo -c fitevd.c -o libcommon_la-fitevd.o >/dev/null 2>&1
2651:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mcast-match.lo -MD -MP -MF .deps/libcommon_la-mcast-match.Tpo -c mcast-match.c  -fno-common -DPIC -o .libs/libcommon_la-mcast-match.o
2652:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-log-hmm.lo -MD -MP -MF .deps/libcommon_la-log-hmm.Tpo -c log-hmm.c -o libcommon_la-log-hmm.o >/dev/null 2>&1
2653:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-meme-sax.lo -MD -MP -MF .deps/libcommon_la-meme-sax.Tpo -c meme-sax.c  -fno-common -DPIC -o .libs/libcommon_la-meme-sax.o
2654:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-match.lo -MD -MP -MF .deps/libcommon_la-match.Tpo -c match.c -o libcommon_la-match.o >/dev/null 2>&1
2655:info:build mv -f .deps/libcommon_la-karlin.Tpo .deps/libcommon_la-karlin.Plo
2656:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-metameme.lo -MD -MP -MF .deps/libcommon_la-metameme.Tpo -c -o libcommon_la-metameme.lo `test -f 'metameme.c' || echo './'`metameme.c
2657:info:build mv -f .deps/libcommon_la-html-data.Tpo .deps/libcommon_la-html-data.Plo
2658:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mhmm.lo -MD -MP -MF .deps/libcommon_la-mhmm.Tpo -c -o libcommon_la-mhmm.lo `test -f 'mhmm.c' || echo './'`mhmm.c
2659:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-json-reader.lo -MD -MP -MF .deps/libcommon_la-json-reader.Tpo -c json-reader.c -o libcommon_la-json-reader.o >/dev/null 2>&1
2660:info:build mv -f .deps/libcommon_la-linked-list.Tpo .deps/libcommon_la-linked-list.Plo
2661:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mhmms.lo -MD -MP -MF .deps/libcommon_la-mhmms.Tpo -c -o libcommon_la-mhmms.lo `test -f 'mhmms.c' || echo './'`mhmms.c
2662:info:build mv -f .deps/libcommon_la-json-checker.Tpo .deps/libcommon_la-json-checker.Plo
2663:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mhmmscan.lo -MD -MP -MF .deps/libcommon_la-mhmmscan.Tpo -c -o libcommon_la-mhmmscan.lo `test -f 'mhmmscan.c' || echo './'`mhmmscan.c
2664:info:build mv -f .deps/libcommon_la-log-hmm.Tpo .deps/libcommon_la-log-hmm.Plo
2665:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mhmm-state.lo -MD -MP -MF .deps/libcommon_la-mhmm-state.Tpo -c -o libcommon_la-mhmm-state.lo `test -f 'mhmm-state.c' || echo './'`mhmm-state.c
2666:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-logodds.lo -MD -MP -MF .deps/libcommon_la-logodds.Tpo -c logodds.c -o libcommon_la-logodds.o >/dev/null 2>&1
2667:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-metameme.lo -MD -MP -MF .deps/libcommon_la-metameme.Tpo -c metameme.c  -fno-common -DPIC -o .libs/libcommon_la-metameme.o
2668:info:build mv -f .deps/libcommon_la-match.Tpo .deps/libcommon_la-match.Plo
2669:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in.lo -MD -MP -MF .deps/libcommon_la-motif-in.Tpo -c -o libcommon_la-motif-in.lo `test -f 'motif-in.c' || echo './'`motif-in.c
2670:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmm.lo -MD -MP -MF .deps/libcommon_la-mhmm.Tpo -c mhmm.c  -fno-common -DPIC -o .libs/libcommon_la-mhmm.o
2671:info:build mv -f .deps/libcommon_la-json-writer.Tpo .deps/libcommon_la-json-writer.Plo
2672:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-common.lo -MD -MP -MF .deps/libcommon_la-motif-in-common.Tpo -c -o libcommon_la-motif-in-common.lo `test -f 'motif-in-common.c' || echo './'`motif-in-common.c
2673:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mast-util.lo -MD -MP -MF .deps/libcommon_la-mast-util.Tpo -c mast-util.c -o libcommon_la-mast-util.o >/dev/null 2>&1
2674:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmms.lo -MD -MP -MF .deps/libcommon_la-mhmms.Tpo -c mhmms.c  -fno-common -DPIC -o .libs/libcommon_la-mhmms.o
2675:info:build mv -f .deps/libcommon_la-cisml.Tpo .deps/libcommon_la-cisml.Plo
2676:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmmscan.lo -MD -MP -MF .deps/libcommon_la-mhmmscan.Tpo -c mhmmscan.c  -fno-common -DPIC -o .libs/libcommon_la-mhmmscan.o
2677:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-dreme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-dreme-xml.Tpo -c -o libcommon_la-motif-in-dreme-xml.lo `test -f 'motif-in-dreme-xml.c' || echo './'`motif-in-dreme-xml.c
2678:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmm-state.lo -MD -MP -MF .deps/libcommon_la-mhmm-state.Tpo -c mhmm-state.c  -fno-common -DPIC -o .libs/libcommon_la-mhmm-state.o
2679:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mcast-match.lo -MD -MP -MF .deps/libcommon_la-mcast-match.Tpo -c mcast-match.c -o libcommon_la-mcast-match.o >/dev/null 2>&1
2680:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-metameme.lo -MD -MP -MF .deps/libcommon_la-metameme.Tpo -c metameme.c -o libcommon_la-metameme.o >/dev/null 2>&1
2681:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in.lo -MD -MP -MF .deps/libcommon_la-motif-in.Tpo -c motif-in.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in.o
2682:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-common.lo -MD -MP -MF .deps/libcommon_la-motif-in-common.Tpo -c motif-in-common.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-common.o
2683:info:build mv -f .deps/libcommon_la-metameme.Tpo .deps/libcommon_la-metameme.Plo
2684:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-meme-html.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-html.Tpo -c -o libcommon_la-motif-in-meme-html.lo `test -f 'motif-in-meme-html.c' || echo './'`motif-in-meme-html.c
2685:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-dreme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-dreme-xml.Tpo -c motif-in-dreme-xml.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-dreme-xml.o
2686:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-common.lo -MD -MP -MF .deps/libcommon_la-motif-in-common.Tpo -c motif-in-common.c -o libcommon_la-motif-in-common.o >/dev/null 2>&1
2687:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmm-state.lo -MD -MP -MF .deps/libcommon_la-mhmm-state.Tpo -c mhmm-state.c -o libcommon_la-mhmm-state.o >/dev/null 2>&1
2688:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-matrix.lo -MD -MP -MF .deps/libcommon_la-matrix.Tpo -c matrix.c -o libcommon_la-matrix.o >/dev/null 2>&1
2689:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmm.lo -MD -MP -MF .deps/libcommon_la-mhmm.Tpo -c mhmm.c -o libcommon_la-mhmm.o >/dev/null 2>&1
2690:info:build mv -f .deps/libcommon_la-logodds.Tpo .deps/libcommon_la-logodds.Plo
2691:info:build mv -f .deps/libcommon_la-json-reader.Tpo .deps/libcommon_la-json-reader.Plo
2692:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-meme-json.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-json.Tpo -c -o libcommon_la-motif-in-meme-json.lo `test -f 'motif-in-meme-json.c' || echo './'`motif-in-meme-json.c
2693:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-meme-text.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-text.Tpo -c -o libcommon_la-motif-in-meme-text.lo `test -f 'motif-in-meme-text.c' || echo './'`motif-in-meme-text.c
2694:info:build mv -f .deps/libcommon_la-motif-in-common.Tpo .deps/libcommon_la-motif-in-common.Plo
2695:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif-in-meme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-xml.Tpo -c -o libcommon_la-motif-in-meme-xml.lo `test -f 'motif-in-meme-xml.c' || echo './'`motif-in-meme-xml.c
2696:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmmscan.lo -MD -MP -MF .deps/libcommon_la-mhmmscan.Tpo -c mhmmscan.c -o libcommon_la-mhmmscan.o >/dev/null 2>&1
2697:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-meme-sax.lo -MD -MP -MF .deps/libcommon_la-meme-sax.Tpo -c meme-sax.c -o libcommon_la-meme-sax.o >/dev/null 2>&1
2698:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-html.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-html.Tpo -c motif-in-meme-html.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-meme-html.o
2699:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in.lo -MD -MP -MF .deps/libcommon_la-motif-in.Tpo -c motif-in.c -o libcommon_la-motif-in.o >/dev/null 2>&1
2700:info:build mv -f .deps/libcommon_la-fitevd.Tpo .deps/libcommon_la-fitevd.Plo
2701:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif.lo -MD -MP -MF .deps/libcommon_la-motif.Tpo -c -o libcommon_la-motif.lo `test -f 'motif.c' || echo './'`motif.c
2702:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-dreme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-dreme-xml.Tpo -c motif-in-dreme-xml.c -o libcommon_la-motif-in-dreme-xml.o >/dev/null 2>&1
2703:info:build mv -f .deps/libcommon_la-mcast-match.Tpo .deps/libcommon_la-mcast-match.Plo
2704:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motif_regexp.lo -MD -MP -MF .deps/libcommon_la-motif_regexp.Tpo -c -o libcommon_la-motif_regexp.lo `test -f 'motif_regexp.c' || echo './'`motif_regexp.c
2705:info:build mv -f .deps/libcommon_la-mhmm-state.Tpo .deps/libcommon_la-mhmm-state.Plo
2706:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motifs.lo -MD -MP -MF .deps/libcommon_la-motifs.Tpo -c -o libcommon_la-motifs.lo `test -f 'motifs.c' || echo './'`motifs.c
2707:info:build mv -f .deps/libcommon_la-mast-util.Tpo .deps/libcommon_la-mast-util.Plo
2708:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mhmms.lo -MD -MP -MF .deps/libcommon_la-mhmms.Tpo -c mhmms.c -o libcommon_la-mhmms.o >/dev/null 2>&1
2709:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-json.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-json.Tpo -c motif-in-meme-json.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-meme-json.o
2710:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-motiph-scoring.lo -MD -MP -MF .deps/libcommon_la-motiph-scoring.Tpo -c -o libcommon_la-motiph-scoring.lo `test -f 'motiph-scoring.c' || echo './'`motiph-scoring.c
2711:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-text.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-text.Tpo -c motif-in-meme-text.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-meme-text.o
2712:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-xml.Tpo -c motif-in-meme-xml.c  -fno-common -DPIC -o .libs/libcommon_la-motif-in-meme-xml.o
2713:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif.lo -MD -MP -MF .deps/libcommon_la-motif.Tpo -c motif.c  -fno-common -DPIC -o .libs/libcommon_la-motif.o
2714:info:build mv -f .deps/libcommon_la-mhmm.Tpo .deps/libcommon_la-mhmm.Plo
2715:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-mtwist.lo -MD -MP -MF .deps/libcommon_la-mtwist.Tpo -c -o libcommon_la-mtwist.lo `test -f 'mtwist.c' || echo './'`mtwist.c
2716:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif_regexp.lo -MD -MP -MF .deps/libcommon_la-motif_regexp.Tpo -c motif_regexp.c  -fno-common -DPIC -o .libs/libcommon_la-motif_regexp.o
2717:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motifs.lo -MD -MP -MF .deps/libcommon_la-motifs.Tpo -c motifs.c  -fno-common -DPIC -o .libs/libcommon_la-motifs.o
2718:info:build mv -f .deps/libcommon_la-alphabet.Tpo .deps/libcommon_la-alphabet.Plo
2719:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-object-list.lo -MD -MP -MF .deps/libcommon_la-object-list.Tpo -c -o libcommon_la-object-list.lo `test -f 'object-list.c' || echo './'`object-list.c
2720:info:build mv -f .deps/libcommon_la-motif-in-dreme-xml.Tpo .deps/libcommon_la-motif-in-dreme-xml.Plo
2721:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-order.lo -MD -MP -MF .deps/libcommon_la-order.Tpo -c -o libcommon_la-order.lo `test -f 'order.c' || echo './'`order.c
2722:info:build mv -f .deps/libcommon_la-mhmmscan.Tpo .deps/libcommon_la-mhmmscan.Plo
2723:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-data-block.lo -MD -MP -MF .deps/libcommon_la-data-block.Tpo -c -o libcommon_la-data-block.lo `test -f 'data-block.c' || echo './'`data-block.c
2724:info:build mv -f .deps/libcommon_la-motif-in.Tpo .deps/libcommon_la-motif-in.Plo
2725:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motiph-scoring.lo -MD -MP -MF .deps/libcommon_la-motiph-scoring.Tpo -c motiph-scoring.c  -fno-common -DPIC -o .libs/libcommon_la-motiph-scoring.o
2726:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-data-block-reader.lo -MD -MP -MF .deps/libcommon_la-data-block-reader.Tpo -c -o libcommon_la-data-block-reader.lo `test -f 'data-block-reader.c' || echo './'`data-block-reader.c
2727:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-html.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-html.Tpo -c motif-in-meme-html.c -o libcommon_la-motif-in-meme-html.o >/dev/null 2>&1
2728:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif_regexp.lo -MD -MP -MF .deps/libcommon_la-motif_regexp.Tpo -c motif_regexp.c -o libcommon_la-motif_regexp.o >/dev/null 2>&1
2729:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mtwist.lo -MD -MP -MF .deps/libcommon_la-mtwist.Tpo -c mtwist.c  -fno-common -DPIC -o .libs/libcommon_la-mtwist.o
2730:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-json.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-json.Tpo -c motif-in-meme-json.c -o libcommon_la-motif-in-meme-json.o >/dev/null 2>&1
2731:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-xml.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-xml.Tpo -c motif-in-meme-xml.c -o libcommon_la-motif-in-meme-xml.o >/dev/null 2>&1
2732:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motifs.lo -MD -MP -MF .deps/libcommon_la-motifs.Tpo -c motifs.c -o libcommon_la-motifs.o >/dev/null 2>&1
2733:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-object-list.lo -MD -MP -MF .deps/libcommon_la-object-list.Tpo -c object-list.c  -fno-common -DPIC -o .libs/libcommon_la-object-list.o
2734:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-order.lo -MD -MP -MF .deps/libcommon_la-order.Tpo -c order.c  -fno-common -DPIC -o .libs/libcommon_la-order.o
2735:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-data-block.lo -MD -MP -MF .deps/libcommon_la-data-block.Tpo -c data-block.c  -fno-common -DPIC -o .libs/libcommon_la-data-block.o
2736:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-data-block-reader.lo -MD -MP -MF .deps/libcommon_la-data-block-reader.Tpo -c data-block-reader.c  -fno-common -DPIC -o .libs/libcommon_la-data-block-reader.o
2737:info:build mv -f .deps/libcommon_la-motif_regexp.Tpo .deps/libcommon_la-motif_regexp.Plo
2738:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-parser-message.lo -MD -MP -MF .deps/libcommon_la-parser-message.Tpo -c -o libcommon_la-parser-message.lo `test -f 'parser-message.c' || echo './'`parser-message.c
2739:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-object-list.lo -MD -MP -MF .deps/libcommon_la-object-list.Tpo -c object-list.c -o libcommon_la-object-list.o >/dev/null 2>&1
2740:info:build mv -f .deps/libcommon_la-mhmms.Tpo .deps/libcommon_la-mhmms.Plo
2741:info:build mv -f .deps/libcommon_la-matrix.Tpo .deps/libcommon_la-matrix.Plo
2742:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-data-block.lo -MD -MP -MF .deps/libcommon_la-data-block.Tpo -c data-block.c -o libcommon_la-data-block.o >/dev/null 2>&1
2743:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-prealigned-io.lo -MD -MP -MF .deps/libcommon_la-prealigned-io.Tpo -c -o libcommon_la-prealigned-io.lo `test -f 'prealigned-io.c' || echo './'`prealigned-io.c
2744:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-prior-reader-from-psp.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-psp.Tpo -c -o libcommon_la-prior-reader-from-psp.lo `test -f 'prior-reader-from-psp.c' || echo './'`prior-reader-from-psp.c
2745:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-data-block-reader.lo -MD -MP -MF .deps/libcommon_la-data-block-reader.Tpo -c data-block-reader.c -o libcommon_la-data-block-reader.o >/dev/null 2>&1
2746:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-mtwist.lo -MD -MP -MF .deps/libcommon_la-mtwist.Tpo -c mtwist.c -o libcommon_la-mtwist.o >/dev/null 2>&1
2747:info:build mv -f .deps/libcommon_la-motifs.Tpo .deps/libcommon_la-motifs.Plo
2748:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-order.lo -MD -MP -MF .deps/libcommon_la-order.Tpo -c order.c -o libcommon_la-order.o >/dev/null 2>&1
2749:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-prior-reader-from-wig.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-wig.Tpo -c -o libcommon_la-prior-reader-from-wig.lo `test -f 'prior-reader-from-wig.c' || echo './'`prior-reader-from-wig.c
2750:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif-in-meme-text.lo -MD -MP -MF .deps/libcommon_la-motif-in-meme-text.Tpo -c motif-in-meme-text.c -o libcommon_la-motif-in-meme-text.o >/dev/null 2>&1
2751:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motif.lo -MD -MP -MF .deps/libcommon_la-motif.Tpo -c motif.c -o libcommon_la-motif.o >/dev/null 2>&1
2752:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-motiph-scoring.lo -MD -MP -MF .deps/libcommon_la-motiph-scoring.Tpo -c motiph-scoring.c -o libcommon_la-motiph-scoring.o >/dev/null 2>&1
2753:info:build mv -f .deps/libcommon_la-motif-in-meme-json.Tpo .deps/libcommon_la-motif-in-meme-json.Plo
2754:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-prior-dist.lo -MD -MP -MF .deps/libcommon_la-prior-dist.Tpo -c -o libcommon_la-prior-dist.lo `test -f 'prior-dist.c' || echo './'`prior-dist.c
2755:info:build mv -f .deps/libcommon_la-data-block.Tpo .deps/libcommon_la-data-block.Plo
2756:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-pssm.lo -MD -MP -MF .deps/libcommon_la-pssm.Tpo -c -o libcommon_la-pssm.lo `test -f 'pssm.c' || echo './'`pssm.c
2757:info:build mv -f .deps/libcommon_la-motif-in-meme-html.Tpo .deps/libcommon_la-motif-in-meme-html.Plo
2758:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-parser-message.lo -MD -MP -MF .deps/libcommon_la-parser-message.Tpo -c parser-message.c  -fno-common -DPIC -o .libs/libcommon_la-parser-message.o
2759:info:build mv -f .deps/libcommon_la-motif-in-meme-xml.Tpo .deps/libcommon_la-motif-in-meme-xml.Plo
2760:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-pssm-distr.lo -MD -MP -MF .deps/libcommon_la-pssm-distr.Tpo -c -o libcommon_la-pssm-distr.lo `test -f 'pssm-distr.c' || echo './'`pssm-distr.c
2761:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-qvalue.lo -MD -MP -MF .deps/libcommon_la-qvalue.Tpo -c -o libcommon_la-qvalue.lo `test -f 'qvalue.c' || echo './'`qvalue.c
2762:info:build mv -f .deps/libcommon_la-object-list.Tpo .deps/libcommon_la-object-list.Plo
2763:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-ranksum_test.lo -MD -MP -MF .deps/libcommon_la-ranksum_test.Tpo -c -o libcommon_la-ranksum_test.lo `test -f 'ranksum_test.c' || echo './'`ranksum_test.c
2764:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prealigned-io.lo -MD -MP -MF .deps/libcommon_la-prealigned-io.Tpo -c prealigned-io.c  -fno-common -DPIC -o .libs/libcommon_la-prealigned-io.o
2765:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-reader-from-psp.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-psp.Tpo -c prior-reader-from-psp.c  -fno-common -DPIC -o .libs/libcommon_la-prior-reader-from-psp.o
2766:info:build mv -f .deps/libcommon_la-meme-sax.Tpo .deps/libcommon_la-meme-sax.Plo
2767:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-rdb-matrix.lo -MD -MP -MF .deps/libcommon_la-rdb-matrix.Tpo -c -o libcommon_la-rdb-matrix.lo `test -f 'rdb-matrix.c' || echo './'`rdb-matrix.c
2768:info:build mv -f .deps/libcommon_la-data-block-reader.Tpo .deps/libcommon_la-data-block-reader.Plo
2769:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-read-mhmm.lo -MD -MP -MF .deps/libcommon_la-read-mhmm.Tpo -c -o libcommon_la-read-mhmm.lo `test -f 'read-mhmm.c' || echo './'`read-mhmm.c
2770:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-reader-from-wig.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-wig.Tpo -c prior-reader-from-wig.c  -fno-common -DPIC -o .libs/libcommon_la-prior-reader-from-wig.o
2771:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-parser-message.lo -MD -MP -MF .deps/libcommon_la-parser-message.Tpo -c parser-message.c -o libcommon_la-parser-message.o >/dev/null 2>&1
2772:info:build mv -f .deps/libcommon_la-order.Tpo .deps/libcommon_la-order.Plo
2773:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-read_sequence.lo -MD -MP -MF .deps/libcommon_la-read_sequence.Tpo -c -o libcommon_la-read_sequence.lo `test -f 'read_sequence.c' || echo './'`read_sequence.c
2774:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-dist.lo -MD -MP -MF .deps/libcommon_la-prior-dist.Tpo -c prior-dist.c  -fno-common -DPIC -o .libs/libcommon_la-prior-dist.o
2775:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-pssm.lo -MD -MP -MF .deps/libcommon_la-pssm.Tpo -c pssm.c  -fno-common -DPIC -o .libs/libcommon_la-pssm.o
2776:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-qvalue.lo -MD -MP -MF .deps/libcommon_la-qvalue.Tpo -c qvalue.c  -fno-common -DPIC -o .libs/libcommon_la-qvalue.o
2777:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-pssm-distr.lo -MD -MP -MF .deps/libcommon_la-pssm-distr.Tpo -c pssm-distr.c  -fno-common -DPIC -o .libs/libcommon_la-pssm-distr.o
2778:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prealigned-io.lo -MD -MP -MF .deps/libcommon_la-prealigned-io.Tpo -c prealigned-io.c -o libcommon_la-prealigned-io.o >/dev/null 2>&1
2779:info:build mv -f .deps/libcommon_la-mtwist.Tpo .deps/libcommon_la-mtwist.Plo
2780:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-red-black-tree.lo -MD -MP -MF .deps/libcommon_la-red-black-tree.Tpo -c -o libcommon_la-red-black-tree.lo `test -f 'red-black-tree.c' || echo './'`red-black-tree.c
2781:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ranksum_test.lo -MD -MP -MF .deps/libcommon_la-ranksum_test.Tpo -c ranksum_test.c  -fno-common -DPIC -o .libs/libcommon_la-ranksum_test.o
2782:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-reader-from-wig.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-wig.Tpo -c prior-reader-from-wig.c -o libcommon_la-prior-reader-from-wig.o >/dev/null 2>&1
2783:info:build mv -f .deps/libcommon_la-parser-message.Tpo .deps/libcommon_la-parser-message.Plo
2784:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-regex-utils.lo -MD -MP -MF .deps/libcommon_la-regex-utils.Tpo -c -o libcommon_la-regex-utils.lo `test -f 'regex-utils.c' || echo './'`regex-utils.c
2785:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-reader-from-psp.lo -MD -MP -MF .deps/libcommon_la-prior-reader-from-psp.Tpo -c prior-reader-from-psp.c -o libcommon_la-prior-reader-from-psp.o >/dev/null 2>&1
2786:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-rdb-matrix.lo -MD -MP -MF .deps/libcommon_la-rdb-matrix.Tpo -c rdb-matrix.c  -fno-common -DPIC -o .libs/libcommon_la-rdb-matrix.o
2787:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-read-mhmm.lo -MD -MP -MF .deps/libcommon_la-read-mhmm.Tpo -c read-mhmm.c  -fno-common -DPIC -o .libs/libcommon_la-read-mhmm.o
2788:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-prior-dist.lo -MD -MP -MF .deps/libcommon_la-prior-dist.Tpo -c prior-dist.c -o libcommon_la-prior-dist.o >/dev/null 2>&1
2789:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-pssm-distr.lo -MD -MP -MF .deps/libcommon_la-pssm-distr.Tpo -c pssm-distr.c -o libcommon_la-pssm-distr.o >/dev/null 2>&1
2790:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-read_sequence.lo -MD -MP -MF .deps/libcommon_la-read_sequence.Tpo -c read_sequence.c  -fno-common -DPIC -o .libs/libcommon_la-read_sequence.o
2791:info:build mv -f .deps/libcommon_la-prealigned-io.Tpo .deps/libcommon_la-prealigned-io.Plo
2792:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-regress.lo -MD -MP -MF .deps/libcommon_la-regress.Tpo -c -o libcommon_la-regress.lo `test -f 'regress.c' || echo './'`regress.c
2793:info:build mv -f .deps/libcommon_la-prior-reader-from-wig.Tpo .deps/libcommon_la-prior-reader-from-wig.Plo
2794:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-red-black-tree.lo -MD -MP -MF .deps/libcommon_la-red-black-tree.Tpo -c red-black-tree.c  -fno-common -DPIC -o .libs/libcommon_la-red-black-tree.o
2795:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-reservoir.lo -MD -MP -MF .deps/libcommon_la-reservoir.Tpo -c -o libcommon_la-reservoir.lo `test -f 'reservoir.c' || echo './'`reservoir.c
2796:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-qvalue.lo -MD -MP -MF .deps/libcommon_la-qvalue.Tpo -c qvalue.c -o libcommon_la-qvalue.o >/dev/null 2>&1
2797:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-regex-utils.lo -MD -MP -MF .deps/libcommon_la-regex-utils.Tpo -c regex-utils.c  -fno-common -DPIC -o .libs/libcommon_la-regex-utils.o
2798:info:build mv -f .deps/libcommon_la-motiph-scoring.Tpo .deps/libcommon_la-motiph-scoring.Plo
2799:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-sax-parser-utils.lo -MD -MP -MF .deps/libcommon_la-sax-parser-utils.Tpo -c -o libcommon_la-sax-parser-utils.lo `test -f 'sax-parser-utils.c' || echo './'`sax-parser-utils.c
2800:info:build mv -f .deps/libcommon_la-prior-dist.Tpo .deps/libcommon_la-prior-dist.Plo
2801:info:build mv -f .deps/libcommon_la-prior-reader-from-psp.Tpo .deps/libcommon_la-prior-reader-from-psp.Plo
2802:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-scanned-sequence.lo -MD -MP -MF .deps/libcommon_la-scanned-sequence.Tpo -c -o libcommon_la-scanned-sequence.lo `test -f 'scanned-sequence.c' || echo './'`scanned-sequence.c
2803:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-scored-sites.lo -MD -MP -MF .deps/libcommon_la-scored-sites.Tpo -c -o libcommon_la-scored-sites.lo `test -f 'scored-sites.c' || echo './'`scored-sites.c
2804:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-ranksum_test.lo -MD -MP -MF .deps/libcommon_la-ranksum_test.Tpo -c ranksum_test.c -o libcommon_la-ranksum_test.o >/dev/null 2>&1
2805:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-rdb-matrix.lo -MD -MP -MF .deps/libcommon_la-rdb-matrix.Tpo -c rdb-matrix.c -o libcommon_la-rdb-matrix.o >/dev/null 2>&1
2806:info:build mv -f .deps/libcommon_la-pssm-distr.Tpo .deps/libcommon_la-pssm-distr.Plo
2807:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-seq.lo -MD -MP -MF .deps/libcommon_la-seq.Tpo -c -o libcommon_la-seq.lo `test -f 'seq.c' || echo './'`seq.c
2808:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-regress.lo -MD -MP -MF .deps/libcommon_la-regress.Tpo -c regress.c  -fno-common -DPIC -o .libs/libcommon_la-regress.o
2809:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-read_sequence.lo -MD -MP -MF .deps/libcommon_la-read_sequence.Tpo -c read_sequence.c -o libcommon_la-read_sequence.o >/dev/null 2>&1
2810:info:build mv -f .deps/libcommon_la-motif.Tpo .deps/libcommon_la-motif.Plo
2811:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-seq-reader-from-fasta.lo -MD -MP -MF .deps/libcommon_la-seq-reader-from-fasta.Tpo -c -o libcommon_la-seq-reader-from-fasta.lo `test -f 'seq-reader-from-fasta.c' || echo './'`seq-reader-from-fasta.c
2812:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-reservoir.lo -MD -MP -MF .deps/libcommon_la-reservoir.Tpo -c reservoir.c  -fno-common -DPIC -o .libs/libcommon_la-reservoir.o
2813:info:build mv -f .deps/libcommon_la-motif-in-meme-text.Tpo .deps/libcommon_la-motif-in-meme-text.Plo
2814:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-simple-getopt.lo -MD -MP -MF .deps/libcommon_la-simple-getopt.Tpo -c -o libcommon_la-simple-getopt.lo `test -f 'simple-getopt.c' || echo './'`simple-getopt.c
2815:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-sax-parser-utils.lo -MD -MP -MF .deps/libcommon_la-sax-parser-utils.Tpo -c sax-parser-utils.c  -fno-common -DPIC -o .libs/libcommon_la-sax-parser-utils.o
2816:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-regex-utils.lo -MD -MP -MF .deps/libcommon_la-regex-utils.Tpo -c regex-utils.c -o libcommon_la-regex-utils.o >/dev/null 2>&1
2817:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-read-mhmm.lo -MD -MP -MF .deps/libcommon_la-read-mhmm.Tpo -c read-mhmm.c -o libcommon_la-read-mhmm.o >/dev/null 2>&1
2818:info:build mv -f .deps/libcommon_la-qvalue.Tpo .deps/libcommon_la-qvalue.Plo
2819:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-spearman-rank-correlation.lo -MD -MP -MF .deps/libcommon_la-spearman-rank-correlation.Tpo -c -o libcommon_la-spearman-rank-correlation.lo `test -f 'spearman-rank-correlation.c' || echo './'`spearman-rank-correlation.c
2820:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-scanned-sequence.lo -MD -MP -MF .deps/libcommon_la-scanned-sequence.Tpo -c scanned-sequence.c  -fno-common -DPIC -o .libs/libcommon_la-scanned-sequence.o
2821:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-scored-sites.lo -MD -MP -MF .deps/libcommon_la-scored-sites.Tpo -c scored-sites.c  -fno-common -DPIC -o .libs/libcommon_la-scored-sites.o
2822:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-regress.lo -MD -MP -MF .deps/libcommon_la-regress.Tpo -c regress.c -o libcommon_la-regress.o >/dev/null 2>&1
2823:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-seq.lo -MD -MP -MF .deps/libcommon_la-seq.Tpo -c seq.c  -fno-common -DPIC -o .libs/libcommon_la-seq.o
2824:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-reservoir.lo -MD -MP -MF .deps/libcommon_la-reservoir.Tpo -c reservoir.c -o libcommon_la-reservoir.o >/dev/null 2>&1
2825:info:build mv -f .deps/libcommon_la-rdb-matrix.Tpo .deps/libcommon_la-rdb-matrix.Plo
2826:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-seq-reader-from-fasta.lo -MD -MP -MF .deps/libcommon_la-seq-reader-from-fasta.Tpo -c seq-reader-from-fasta.c  -fno-common -DPIC -o .libs/libcommon_la-seq-reader-from-fasta.o
2827:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-string-builder.lo -MD -MP -MF .deps/libcommon_la-string-builder.Tpo -c -o libcommon_la-string-builder.lo `test -f 'string-builder.c' || echo './'`string-builder.c
2828:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-red-black-tree.lo -MD -MP -MF .deps/libcommon_la-red-black-tree.Tpo -c red-black-tree.c -o libcommon_la-red-black-tree.o >/dev/null 2>&1
2829:info:build mv -f .deps/libcommon_la-read_sequence.Tpo .deps/libcommon_la-read_sequence.Plo
2830:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-string-list.lo -MD -MP -MF .deps/libcommon_la-string-list.Tpo -c -o libcommon_la-string-list.lo `test -f 'string-list.c' || echo './'`string-list.c
2831:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-scanned-sequence.lo -MD -MP -MF .deps/libcommon_la-scanned-sequence.Tpo -c scanned-sequence.c -o libcommon_la-scanned-sequence.o >/dev/null 2>&1
2832:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-simple-getopt.lo -MD -MP -MF .deps/libcommon_la-simple-getopt.Tpo -c simple-getopt.c  -fno-common -DPIC -o .libs/libcommon_la-simple-getopt.o
2833:info:build mv -f .deps/libcommon_la-ranksum_test.Tpo .deps/libcommon_la-ranksum_test.Plo
2834:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-string-match.lo -MD -MP -MF .deps/libcommon_la-string-match.Tpo -c -o libcommon_la-string-match.lo `test -f 'string-match.c' || echo './'`string-match.c
2835:info:build mv -f .deps/libcommon_la-regress.Tpo .deps/libcommon_la-regress.Plo
2836:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-subst-matrix.lo -MD -MP -MF .deps/libcommon_la-subst-matrix.Tpo -c -o libcommon_la-subst-matrix.lo `test -f 'subst-matrix.c' || echo './'`subst-matrix.c
2837:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-spearman-rank-correlation.lo -MD -MP -MF .deps/libcommon_la-spearman-rank-correlation.Tpo -c spearman-rank-correlation.c  -fno-common -DPIC -o .libs/libcommon_la-spearman-rank-correlation.o
2838:info:build mv -f .deps/libcommon_la-reservoir.Tpo .deps/libcommon_la-reservoir.Plo
2839:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-substmatrix-table.lo -MD -MP -MF .deps/libcommon_la-substmatrix-table.Tpo -c -o libcommon_la-substmatrix-table.lo `test -f 'substmatrix-table.c' || echo './'`substmatrix-table.c
2840:info:build mv -f .deps/libcommon_la-regex-utils.Tpo .deps/libcommon_la-regex-utils.Plo
2841:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-sax-parser-utils.lo -MD -MP -MF .deps/libcommon_la-sax-parser-utils.Tpo -c sax-parser-utils.c -o libcommon_la-sax-parser-utils.o >/dev/null 2>&1
2842:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-transfac.lo -MD -MP -MF .deps/libcommon_la-transfac.Tpo -c -o libcommon_la-transfac.lo `test -f 'transfac.c' || echo './'`transfac.c
2843:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-scored-sites.lo -MD -MP -MF .deps/libcommon_la-scored-sites.Tpo -c scored-sites.c -o libcommon_la-scored-sites.o >/dev/null 2>&1
2844:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-simple-getopt.lo -MD -MP -MF .deps/libcommon_la-simple-getopt.Tpo -c simple-getopt.c -o libcommon_la-simple-getopt.o >/dev/null 2>&1
2845:info:build mv -f .deps/libcommon_la-scanned-sequence.Tpo .deps/libcommon_la-scanned-sequence.Plo
2846:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-tree.lo -MD -MP -MF .deps/libcommon_la-tree.Tpo -c -o libcommon_la-tree.lo `test -f 'tree.c' || echo './'`tree.c
2847:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-builder.lo -MD -MP -MF .deps/libcommon_la-string-builder.Tpo -c string-builder.c  -fno-common -DPIC -o .libs/libcommon_la-string-builder.o
2848:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-list.lo -MD -MP -MF .deps/libcommon_la-string-list.Tpo -c string-list.c  -fno-common -DPIC -o .libs/libcommon_la-string-list.o
2849:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-pssm.lo -MD -MP -MF .deps/libcommon_la-pssm.Tpo -c pssm.c -o libcommon_la-pssm.o >/dev/null 2>&1
2850:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-match.lo -MD -MP -MF .deps/libcommon_la-string-match.Tpo -c string-match.c  -fno-common -DPIC -o .libs/libcommon_la-string-match.o
2851:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-subst-matrix.lo -MD -MP -MF .deps/libcommon_la-subst-matrix.Tpo -c subst-matrix.c  -fno-common -DPIC -o .libs/libcommon_la-subst-matrix.o
2852:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-spearman-rank-correlation.lo -MD -MP -MF .deps/libcommon_la-spearman-rank-correlation.Tpo -c spearman-rank-correlation.c -o libcommon_la-spearman-rank-correlation.o >/dev/null 2>&1
2853:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-seq-reader-from-fasta.lo -MD -MP -MF .deps/libcommon_la-seq-reader-from-fasta.Tpo -c seq-reader-from-fasta.c -o libcommon_la-seq-reader-from-fasta.o >/dev/null 2>&1
2854:info:build mv -f .deps/libcommon_la-simple-getopt.Tpo .deps/libcommon_la-simple-getopt.Plo
2855:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-utils.lo -MD -MP -MF .deps/libcommon_la-utils.Tpo -c -o libcommon_la-utils.lo `test -f 'utils.c' || echo './'`utils.c
2856:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-seq.lo -MD -MP -MF .deps/libcommon_la-seq.Tpo -c seq.c -o libcommon_la-seq.o >/dev/null 2>&1
2857:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-substmatrix-table.lo -MD -MP -MF .deps/libcommon_la-substmatrix-table.Tpo -c substmatrix-table.c  -fno-common -DPIC -o .libs/libcommon_la-substmatrix-table.o
2858:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-transfac.lo -MD -MP -MF .deps/libcommon_la-transfac.Tpo -c transfac.c  -fno-common -DPIC -o .libs/libcommon_la-transfac.o
2859:info:build mv -f .deps/libcommon_la-read-mhmm.Tpo .deps/libcommon_la-read-mhmm.Plo
2860:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-wiggle-reader.lo -MD -MP -MF .deps/libcommon_la-wiggle-reader.Tpo -c -o libcommon_la-wiggle-reader.lo `test -f 'wiggle-reader.c' || echo './'`wiggle-reader.c
2861:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-tree.lo -MD -MP -MF .deps/libcommon_la-tree.Tpo -c tree.c  -fno-common -DPIC -o .libs/libcommon_la-tree.o
2862:info:build mv -f .deps/libcommon_la-red-black-tree.Tpo .deps/libcommon_la-red-black-tree.Plo
2863:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-write-mhmm.lo -MD -MP -MF .deps/libcommon_la-write-mhmm.Tpo -c -o libcommon_la-write-mhmm.lo `test -f 'write-mhmm.c' || echo './'`write-mhmm.c
2864:info:build mv -f .deps/libcommon_la-scored-sites.Tpo .deps/libcommon_la-scored-sites.Plo
2865:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-xlate-in.lo -MD -MP -MF .deps/libcommon_la-xlate-in.Tpo -c -o libcommon_la-xlate-in.lo `test -f 'xlate-in.c' || echo './'`xlate-in.c
2866:info:build mv -f .deps/libcommon_la-sax-parser-utils.Tpo .deps/libcommon_la-sax-parser-utils.Plo
2867:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-xml-out.lo -MD -MP -MF .deps/libcommon_la-xml-out.Tpo -c -o libcommon_la-xml-out.lo `test -f 'xml-out.c' || echo './'`xml-out.c
2868:info:build mv -f .deps/libcommon_la-spearman-rank-correlation.Tpo .deps/libcommon_la-spearman-rank-correlation.Plo
2869:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT libcommon_la-xml-util.lo -MD -MP -MF .deps/libcommon_la-xml-util.Tpo -c -o libcommon_la-xml-util.lo `test -f 'xml-util.c' || echo './'`xml-util.c
2870:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-builder.lo -MD -MP -MF .deps/libcommon_la-string-builder.Tpo -c string-builder.c -o libcommon_la-string-builder.o >/dev/null 2>&1
2871:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-match.lo -MD -MP -MF .deps/libcommon_la-string-match.Tpo -c string-match.c -o libcommon_la-string-match.o >/dev/null 2>&1
2872:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-utils.lo -MD -MP -MF .deps/libcommon_la-utils.Tpo -c utils.c  -fno-common -DPIC -o .libs/libcommon_la-utils.o
2873:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-subst-matrix.lo -MD -MP -MF .deps/libcommon_la-subst-matrix.Tpo -c subst-matrix.c -o libcommon_la-subst-matrix.o >/dev/null 2>&1
2874:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-wiggle-reader.lo -MD -MP -MF .deps/libcommon_la-wiggle-reader.Tpo -c wiggle-reader.c  -fno-common -DPIC -o .libs/libcommon_la-wiggle-reader.o
2875:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-transfac.lo -MD -MP -MF .deps/libcommon_la-transfac.Tpo -c transfac.c -o libcommon_la-transfac.o >/dev/null 2>&1
2876:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-substmatrix-table.lo -MD -MP -MF .deps/libcommon_la-substmatrix-table.Tpo -c substmatrix-table.c -o libcommon_la-substmatrix-table.o >/dev/null 2>&1
2877:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-write-mhmm.lo -MD -MP -MF .deps/libcommon_la-write-mhmm.Tpo -c write-mhmm.c  -fno-common -DPIC -o .libs/libcommon_la-write-mhmm.o
2878:info:build mv -f .deps/libcommon_la-seq-reader-from-fasta.Tpo .deps/libcommon_la-seq-reader-from-fasta.Plo
2879:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT alphtype-alphtype.o -MD -MP -MF .deps/alphtype-alphtype.Tpo -c -o alphtype-alphtype.o `test -f 'alphtype.c' || echo './'`alphtype.c
2880:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xlate-in.lo -MD -MP -MF .deps/libcommon_la-xlate-in.Tpo -c xlate-in.c  -fno-common -DPIC -o .libs/libcommon_la-xlate-in.o
2881:info:build mv -f .deps/libcommon_la-seq.Tpo .deps/libcommon_la-seq.Plo
2882:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ama-ama.o -MD -MP -MF .deps/ama-ama.Tpo -c -o ama-ama.o `test -f 'ama.c' || echo './'`ama.c
2883:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xml-out.lo -MD -MP -MF .deps/libcommon_la-xml-out.Tpo -c xml-out.c  -fno-common -DPIC -o .libs/libcommon_la-xml-out.o
2884:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xml-util.lo -MD -MP -MF .deps/libcommon_la-xml-util.Tpo -c xml-util.c  -fno-common -DPIC -o .libs/libcommon_la-xml-util.o
2885:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-string-list.lo -MD -MP -MF .deps/libcommon_la-string-list.Tpo -c string-list.c -o libcommon_la-string-list.o >/dev/null 2>&1
2886:info:build mv -f .deps/alphtype-alphtype.Tpo .deps/alphtype-alphtype.Po
2887:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ame-ame.o -MD -MP -MF .deps/ame-ame.Tpo -c -o ame-ame.o `test -f 'ame.c' || echo './'`ame.c
2888:info:build mv -f .deps/libcommon_la-string-match.Tpo .deps/libcommon_la-string-match.Plo
2889:info:build mv -f .deps/libcommon_la-string-builder.Tpo .deps/libcommon_la-string-builder.Plo
2890:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ame-ramen_scan.o -MD -MP -MF .deps/ame-ramen_scan.Tpo -c -o ame-ramen_scan.o `test -f 'ramen_scan.c' || echo './'`ramen_scan.c
2891:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ame-fisher_exact.o -MD -MP -MF .deps/ame-fisher_exact.Tpo -c -o ame-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c
2892:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-wiggle-reader.lo -MD -MP -MF .deps/libcommon_la-wiggle-reader.Tpo -c wiggle-reader.c -o libcommon_la-wiggle-reader.o >/dev/null 2>&1
2893:info:build mv -f .deps/libcommon_la-subst-matrix.Tpo .deps/libcommon_la-subst-matrix.Plo
2894:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DCL_MAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ceqlogo-ceqlogo.o -MD -MP -MF .deps/ceqlogo-ceqlogo.Tpo -c -o ceqlogo-ceqlogo.o `test -f 'ceqlogo.c' || echo './'`ceqlogo.c
2895:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-tree.lo -MD -MP -MF .deps/libcommon_la-tree.Tpo -c tree.c -o libcommon_la-tree.o >/dev/null 2>&1
2896:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-write-mhmm.lo -MD -MP -MF .deps/libcommon_la-write-mhmm.Tpo -c write-mhmm.c -o libcommon_la-write-mhmm.o >/dev/null 2>&1
2897:info:build mv -f .deps/libcommon_la-substmatrix-table.Tpo .deps/libcommon_la-substmatrix-table.Plo
2898:info:build mv -f .deps/libcommon_la-transfac.Tpo .deps/libcommon_la-transfac.Plo
2899:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT centrimo-centrimo.o -MD -MP -MF .deps/centrimo-centrimo.Tpo -c -o centrimo-centrimo.o `test -f 'centrimo.c' || echo './'`centrimo.c
2900:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT centrimo-fisher_exact.o -MD -MP -MF .deps/centrimo-fisher_exact.Tpo -c -o centrimo-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c
2901:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xml-out.lo -MD -MP -MF .deps/libcommon_la-xml-out.Tpo -c xml-out.c -o libcommon_la-xml-out.o >/dev/null 2>&1
2902:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xml-util.lo -MD -MP -MF .deps/libcommon_la-xml-util.Tpo -c xml-util.c -o libcommon_la-xml-util.o >/dev/null 2>&1
2903:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-xlate-in.lo -MD -MP -MF .deps/libcommon_la-xlate-in.Tpo -c xlate-in.c -o libcommon_la-xlate-in.o >/dev/null 2>&1
2904:info:build mv -f .deps/ame-ramen_scan.Tpo .deps/ame-ramen_scan.Po
2905:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT clustalw2fasta-clustalw2fasta.o -MD -MP -MF .deps/clustalw2fasta-clustalw2fasta.Tpo -c -o clustalw2fasta-clustalw2fasta.o `test -f 'clustalw2fasta.c' || echo './'`clustalw2fasta.c
2906:info:build mv -f .deps/ame-fisher_exact.Tpo .deps/ame-fisher_exact.Po
2907:info:build mv -f .deps/libcommon_la-wiggle-reader.Tpo .deps/libcommon_la-wiggle-reader.Plo
2908:info:build mv -f .deps/libcommon_la-pssm.Tpo .deps/libcommon_la-pssm.Plo
2909:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT clustalw2phylip-clustalw2phylip.o -MD -MP -MF .deps/clustalw2phylip-clustalw2phylip.Tpo -c -o clustalw2phylip-clustalw2phylip.o `test -f 'clustalw2phylip.c' || echo './'`clustalw2phylip.c
2910:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT compute_prior_dist-compute-prior-dist.o -MD -MP -MF .deps/compute_prior_dist-compute-prior-dist.Tpo -c -o compute_prior_dist-compute-prior-dist.o `test -f 'compute-prior-dist.c' || echo './'`compute-prior-dist.c
2911:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT compute_uniform_priors-compute-uniform-priors.o -MD -MP -MF .deps/compute_uniform_priors-compute-uniform-priors.Tpo -c -o compute_uniform_priors-compute-uniform-priors.o `test -f 'compute-uniform-priors.c' || echo './'`compute-uniform-priors.c
2912:info:build mv -f .deps/libcommon_la-write-mhmm.Tpo .deps/libcommon_la-write-mhmm.Plo
2913:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT create_priors-create-priors.o -MD -MP -MF .deps/create_priors-create-priors.Tpo -c -o create_priors-create-priors.o `test -f 'create-priors.c' || echo './'`create-priors.c
2914:info:build mv -f .deps/libcommon_la-xml-out.Tpo .deps/libcommon_la-xml-out.Plo
2915:info:build mv -f .deps/centrimo-fisher_exact.Tpo .deps/centrimo-fisher_exact.Po
2916:info:build libtool: compile:  /usr/bin/clang -DHAVE_CONFIG_H -I. -I.. -I/opt/local/include -fno-strict-aliasing -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -MT libcommon_la-utils.lo -MD -MP -MF .deps/libcommon_la-utils.Tpo -c utils.c -o libcommon_la-utils.o >/dev/null 2>&1
2917:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fasta_get_markov-fasta-get-markov.o -MD -MP -MF .deps/fasta_get_markov-fasta-get-markov.Tpo -c -o fasta_get_markov-fasta-get-markov.o `test -f 'fasta-get-markov.c' || echo './'`fasta-get-markov.c
2918:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fasta_shuffle_letters-fasta-shuffle-letters.o -MD -MP -MF .deps/fasta_shuffle_letters-fasta-shuffle-letters.Tpo -c -o fasta_shuffle_letters-fasta-shuffle-letters.o `test -f 'fasta-shuffle-letters.c' || echo './'`fasta-shuffle-letters.c
2919:info:build mv -f .deps/libcommon_la-xml-util.Tpo .deps/libcommon_la-xml-util.Plo
2920:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fasta_shuffle_letters-ushuffle.o -MD -MP -MF .deps/fasta_shuffle_letters-ushuffle.Tpo -c -o fasta_shuffle_letters-ushuffle.o `test -f 'ushuffle.c' || echo './'`ushuffle.c
2921:info:build mv -f .deps/libcommon_la-xlate-in.Tpo .deps/libcommon_la-xlate-in.Plo
2922:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fimo-fimo.o -MD -MP -MF .deps/fimo-fimo.Tpo -c -o fimo-fimo.o `test -f 'fimo.c' || echo './'`fimo.c
2923:info:build mv -f .deps/libcommon_la-string-list.Tpo .deps/libcommon_la-string-list.Plo
2924:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fimo-fimo-output.o -MD -MP -MF .deps/fimo-fimo-output.Tpo -c -o fimo-fimo-output.o `test -f 'fimo-output.c' || echo './'`fimo-output.c
2925:info:build mv -f .deps/compute_uniform_priors-compute-uniform-priors.Tpo .deps/compute_uniform_priors-compute-uniform-priors.Po
2926:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DFE_MAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fisher_exact-fisher_exact.o -MD -MP -MF .deps/fisher_exact-fisher_exact.Tpo -c -o fisher_exact-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c
2927:info:build mv -f .deps/clustalw2fasta-clustalw2fasta.Tpo .deps/clustalw2fasta-clustalw2fasta.Po
2928:info:build mv -f .deps/compute_prior_dist-compute-prior-dist.Tpo .deps/compute_prior_dist-compute-prior-dist.Po
2929:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT fitevd-fitevd.o -MD -MP -MF .deps/fitevd-fitevd.Tpo -c -o fitevd-fitevd.o `test -f 'fitevd.c' || echo './'`fitevd.c
2930:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gendb-gendb.o -MD -MP -MF .deps/gendb-gendb.Tpo -c -o gendb-gendb.o `test -f 'gendb.c' || echo './'`gendb.c
2931:info:build mv -f .deps/ama-ama.Tpo .deps/ama-ama.Po
2932:info:build depbase=`echo getsize.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
2933:info:build     /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT getsize.o -MD -MP -MF $depbase.Tpo -c -o getsize.o getsize.c &&\
2934:info:build     mv -f $depbase.Tpo $depbase.Po
2935:info:build mv -f .deps/libcommon_la-tree.Tpo .deps/libcommon_la-tree.Plo
2936:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_alphabet.o -MD -MP -MF .deps/glam2-glam2_alphabet.Tpo -c -o glam2-glam2_alphabet.o `test -f 'glam2_alphabet.c' || echo './'`glam2_alphabet.c
2937:info:build mv -f .deps/fasta_shuffle_letters-ushuffle.Tpo .deps/fasta_shuffle_letters-ushuffle.Po
2938:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_args.o -MD -MP -MF .deps/glam2-glam2_args.Tpo -c -o glam2-glam2_args.o `test -f 'glam2_args.c' || echo './'`glam2_args.c
2939:info:build mv -f .deps/fasta_shuffle_letters-fasta-shuffle-letters.Tpo .deps/fasta_shuffle_letters-fasta-shuffle-letters.Po
2940:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_column_sample.o -MD -MP -MF .deps/glam2-glam2_column_sample.Tpo -c -o glam2-glam2_column_sample.o `test -f 'glam2_column_sample.c' || echo './'`glam2_column_sample.c
2941:info:build mv -f .deps/create_priors-create-priors.Tpo .deps/create_priors-create-priors.Po
2942:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_dirichlet.o -MD -MP -MF .deps/glam2-glam2_dirichlet.Tpo -c -o glam2-glam2_dirichlet.o `test -f 'glam2_dirichlet.c' || echo './'`glam2_dirichlet.c
2943:info:build mv -f .deps/fisher_exact-fisher_exact.Tpo .deps/fisher_exact-fisher_exact.Po
2944:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_dna_prior.o -MD -MP -MF .deps/glam2-glam2_dna_prior.Tpo -c -o glam2-glam2_dna_prior.o `test -f 'glam2_dna_prior.c' || echo './'`glam2_dna_prior.c
2945:info:build mv -f .deps/glam2-glam2_alphabet.Tpo .deps/glam2-glam2_alphabet.Po
2946:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_fasta.o -MD -MP -MF .deps/glam2-glam2_fasta.Tpo -c -o glam2-glam2_fasta.o `test -f 'glam2_fasta.c' || echo './'`glam2_fasta.c
2947:info:build mv -f .deps/ceqlogo-ceqlogo.Tpo .deps/ceqlogo-ceqlogo.Po
2948:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_glam2.o -MD -MP -MF .deps/glam2-glam2_glam2.Tpo -c -o glam2-glam2_glam2.o `test -f 'glam2_glam2.c' || echo './'`glam2_glam2.c
2949:info:build mv -f .deps/glam2-glam2_args.Tpo .deps/glam2-glam2_args.Po
2950:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_glam2_aln.o -MD -MP -MF .deps/glam2-glam2_glam2_aln.Tpo -c -o glam2-glam2_glam2_aln.o `test -f 'glam2_glam2_aln.c' || echo './'`glam2_glam2_aln.c
2951:info:build mv -f .deps/fimo-fimo-output.Tpo .deps/fimo-fimo-output.Po
2952:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_init.o -MD -MP -MF .deps/glam2-glam2_init.Tpo -c -o glam2-glam2_init.o `test -f 'glam2_init.c' || echo './'`glam2_init.c
2953:info:build mv -f .deps/glam2-glam2_dna_prior.Tpo .deps/glam2-glam2_dna_prior.Po
2954:info:build mv -f .deps/fasta_get_markov-fasta-get-markov.Tpo .deps/fasta_get_markov-fasta-get-markov.Po
2955:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_output.o -MD -MP -MF .deps/glam2-glam2_output.Tpo -c -o glam2-glam2_output.o `test -f 'glam2_output.c' || echo './'`glam2_output.c
2956:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_recode3_20comp.o -MD -MP -MF .deps/glam2-glam2_recode3_20comp.Tpo -c -o glam2-glam2_recode3_20comp.o `test -f 'glam2_recode3_20comp.c' || echo './'`glam2_recode3_20comp.c
2957:info:build mv -f .deps/gendb-gendb.Tpo .deps/gendb-gendb.Po
2958:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_site_sample.o -MD -MP -MF .deps/glam2-glam2_site_sample.Tpo -c -o glam2-glam2_site_sample.o `test -f 'glam2_site_sample.c' || echo './'`glam2_site_sample.c
2959:info:build mv -f .deps/clustalw2phylip-clustalw2phylip.Tpo .deps/clustalw2phylip-clustalw2phylip.Po
2960:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2-glam2_util.o -MD -MP -MF .deps/glam2-glam2_util.Tpo -c -o glam2-glam2_util.o `test -f 'glam2_util.c' || echo './'`glam2_util.c
2961:info:build mv -f .deps/libcommon_la-utils.Tpo .deps/libcommon_la-utils.Plo
2962:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2format-glam2_glam2format.o -MD -MP -MF .deps/glam2format-glam2_glam2format.Tpo -c -o glam2format-glam2_glam2format.o `test -f 'glam2_glam2format.c' || echo './'`glam2_glam2format.c
2963:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2format-glam2_alignment.o -MD -MP -MF .deps/glam2format-glam2_alignment.Tpo -c -o glam2format-glam2_alignment.o `test -f 'glam2_alignment.c' || echo './'`glam2_alignment.c
2964:info:build mv -f .deps/glam2-glam2_recode3_20comp.Tpo .deps/glam2-glam2_recode3_20comp.Po
2965:info:build mv -f .deps/glam2-glam2_glam2_aln.Tpo .deps/glam2-glam2_glam2_aln.Po
2966:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2format-glam2_fasta.o -MD -MP -MF .deps/glam2format-glam2_fasta.Tpo -c -o glam2format-glam2_fasta.o `test -f 'glam2_fasta.c' || echo './'`glam2_fasta.c
2967:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2format-glam2_util.o -MD -MP -MF .deps/glam2format-glam2_util.Tpo -c -o glam2format-glam2_util.o `test -f 'glam2_util.c' || echo './'`glam2_util.c
2968:info:build mv -f .deps/glam2-glam2_fasta.Tpo .deps/glam2-glam2_fasta.Po
2969:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2mask-glam2_glam2mask.o -MD -MP -MF .deps/glam2mask-glam2_glam2mask.Tpo -c -o glam2mask-glam2_glam2mask.o `test -f 'glam2_glam2mask.c' || echo './'`glam2_glam2mask.c
2970:info:build mv -f .deps/glam2-glam2_dirichlet.Tpo .deps/glam2-glam2_dirichlet.Po
2971:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2mask-glam2_alignment.o -MD -MP -MF .deps/glam2mask-glam2_alignment.Tpo -c -o glam2mask-glam2_alignment.o `test -f 'glam2_alignment.c' || echo './'`glam2_alignment.c
2972:info:build mv -f .deps/glam2-glam2_glam2.Tpo .deps/glam2-glam2_glam2.Po
2973:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2mask-glam2_fasta.o -MD -MP -MF .deps/glam2mask-glam2_fasta.Tpo -c -o glam2mask-glam2_fasta.o `test -f 'glam2_fasta.c' || echo './'`glam2_fasta.c
2974:info:build mv -f .deps/glam2-glam2_init.Tpo .deps/glam2-glam2_init.Po
2975:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2mask-glam2_util.o -MD -MP -MF .deps/glam2mask-glam2_util.Tpo -c -o glam2mask-glam2_util.o `test -f 'glam2_util.c' || echo './'`glam2_util.c
2976:info:build mv -f .deps/glam2format-glam2_alignment.Tpo .deps/glam2format-glam2_alignment.Po
2977:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_alignment.o -MD -MP -MF .deps/glam2scan-glam2_alignment.Tpo -c -o glam2scan-glam2_alignment.o `test -f 'glam2_alignment.c' || echo './'`glam2_alignment.c
2978:info:build mv -f .deps/fimo-fimo.Tpo .deps/fimo-fimo.Po
2979:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_alphabet.o -MD -MP -MF .deps/glam2scan-glam2_alphabet.Tpo -c -o glam2scan-glam2_alphabet.o `test -f 'glam2_alphabet.c' || echo './'`glam2_alphabet.c
2980:info:build mv -f .deps/glam2-glam2_output.Tpo .deps/glam2-glam2_output.Po
2981:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_dna_prior.o -MD -MP -MF .deps/glam2scan-glam2_dna_prior.Tpo -c -o glam2scan-glam2_dna_prior.o `test -f 'glam2_dna_prior.c' || echo './'`glam2_dna_prior.c
2982:info:build mv -f .deps/glam2mask-glam2_glam2mask.Tpo .deps/glam2mask-glam2_glam2mask.Po
2983:info:build mv -f .deps/glam2-glam2_column_sample.Tpo .deps/glam2-glam2_column_sample.Po
2984:info:build mv -f .deps/glam2mask-glam2_alignment.Tpo .deps/glam2mask-glam2_alignment.Po
2985:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_fasta.o -MD -MP -MF .deps/glam2scan-glam2_fasta.Tpo -c -o glam2scan-glam2_fasta.o `test -f 'glam2_fasta.c' || echo './'`glam2_fasta.c
2986:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_dirichlet.o -MD -MP -MF .deps/glam2scan-glam2_dirichlet.Tpo -c -o glam2scan-glam2_dirichlet.o `test -f 'glam2_dirichlet.c' || echo './'`glam2_dirichlet.c
2987:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_heap.o -MD -MP -MF .deps/glam2scan-glam2_heap.Tpo -c -o glam2scan-glam2_heap.o `test -f 'glam2_heap.c' || echo './'`glam2_heap.c
2988:info:build mv -f .deps/glam2format-glam2_fasta.Tpo .deps/glam2format-glam2_fasta.Po
2989:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_motif.o -MD -MP -MF .deps/glam2scan-glam2_motif.Tpo -c -o glam2scan-glam2_motif.o `test -f 'glam2_motif.c' || echo './'`glam2_motif.c
2990:info:build mv -f .deps/glam2scan-glam2_dna_prior.Tpo .deps/glam2scan-glam2_dna_prior.Po
2991:info:build mv -f .deps/glam2scan-glam2_alignment.Tpo .deps/glam2scan-glam2_alignment.Po
2992:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_scan.o -MD -MP -MF .deps/glam2scan-glam2_scan.Tpo -c -o glam2scan-glam2_scan.o `test -f 'glam2_scan.c' || echo './'`glam2_scan.c
2993:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_scan_args.o -MD -MP -MF .deps/glam2scan-glam2_scan_args.Tpo -c -o glam2scan-glam2_scan_args.o `test -f 'glam2_scan_args.c' || echo './'`glam2_scan_args.c
2994:info:build mv -f .deps/glam2mask-glam2_fasta.Tpo .deps/glam2mask-glam2_fasta.Po
2995:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_scan_init.o -MD -MP -MF .deps/glam2scan-glam2_scan_init.Tpo -c -o glam2scan-glam2_scan_init.o `test -f 'glam2_scan_init.c' || echo './'`glam2_scan_init.c
2996:info:build mv -f .deps/glam2scan-glam2_alphabet.Tpo .deps/glam2scan-glam2_alphabet.Po
2997:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_scan_output.o -MD -MP -MF .deps/glam2scan-glam2_scan_output.Tpo -c -o glam2scan-glam2_scan_output.o `test -f 'glam2_scan_output.c' || echo './'`glam2_scan_output.c
2998:info:build mv -f .deps/glam2scan-glam2_heap.Tpo .deps/glam2scan-glam2_heap.Po
2999:info:build mv -f .deps/glam2-glam2_site_sample.Tpo .deps/glam2-glam2_site_sample.Po
3000:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_recode3_20comp.o -MD -MP -MF .deps/glam2scan-glam2_recode3_20comp.Tpo -c -o glam2scan-glam2_recode3_20comp.o `test -f 'glam2_recode3_20comp.c' || echo './'`glam2_recode3_20comp.c
3001:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT glam2scan-glam2_util.o -MD -MP -MF .deps/glam2scan-glam2_util.Tpo -c -o glam2scan-glam2_util.o `test -f 'glam2_util.c' || echo './'`glam2_util.c
3002:info:build mv -f .deps/centrimo-centrimo.Tpo .deps/centrimo-centrimo.Po
3003:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo-gomo.o -MD -MP -MF .deps/gomo-gomo.Tpo -c -o gomo-gomo.o `test -f 'gomo.c' || echo './'`gomo.c
3004:info:build mv -f .deps/glam2scan-glam2_motif.Tpo .deps/glam2scan-glam2_motif.Po
3005:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo-gomo_highlight.o -MD -MP -MF .deps/gomo-gomo_highlight.Tpo -c -o gomo-gomo_highlight.o `test -f 'gomo_highlight.c' || echo './'`gomo_highlight.c
3006:info:build mv -f .deps/glam2format-glam2_glam2format.Tpo .deps/glam2format-glam2_glam2format.Po
3007:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo-merger.o -MD -MP -MF .deps/gomo-merger.Tpo -c -o gomo-merger.o `test -f 'merger.c' || echo './'`merger.c
3008:info:build mv -f .deps/glam2scan-glam2_recode3_20comp.Tpo .deps/glam2scan-glam2_recode3_20comp.Po
3009:info:build mv -f .deps/glam2scan-glam2_scan_args.Tpo .deps/glam2scan-glam2_scan_args.Po
3010:info:build mv -f .deps/glam2-glam2_util.Tpo .deps/glam2-glam2_util.Po
3011:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo-ranksum_test.o -MD -MP -MF .deps/gomo-ranksum_test.Tpo -c -o gomo-ranksum_test.o `test -f 'ranksum_test.c' || echo './'`ranksum_test.c
3012:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo-read_csv.o -MD -MP -MF .deps/gomo-read_csv.Tpo -c -o gomo-read_csv.o `test -f 'read_csv.c' || echo './'`read_csv.c
3013:info:build mv -f .deps/glam2scan-glam2_fasta.Tpo .deps/glam2scan-glam2_fasta.Po
3014:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT gomo_highlight-gomo_highlight.o -MD -MP -MF .deps/gomo_highlight-gomo_highlight.Tpo -c -o gomo_highlight-gomo_highlight.o `test -f 'gomo_highlight.c' || echo './'`gomo_highlight.c
3015:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT import_html_template-import-html-template.o -MD -MP -MF .deps/import_html_template-import-html-template.Tpo -c -o import_html_template-import-html-template.o `test -f 'import-html-template.c' || echo './'`import-html-template.c
3016:info:build mv -f .deps/glam2format-glam2_util.Tpo .deps/glam2format-glam2_util.Po
3017:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT llr-llr.o -MD -MP -MF .deps/llr-llr.Tpo -c -o llr-llr.o `test -f 'llr.c' || echo './'`llr.c
3018:info:build mv -f .deps/glam2scan-glam2_scan_output.Tpo .deps/glam2scan-glam2_scan_output.Po
3019:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT llr-logs.o -MD -MP -MF .deps/llr-logs.Tpo -c -o llr-logs.o `test -f 'logs.c' || echo './'`logs.c
3020:info:build mv -f .deps/glam2scan-glam2_scan_init.Tpo .deps/glam2scan-glam2_scan_init.Po
3021:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mast-diagram.o -MD -MP -MF .deps/mast-diagram.Tpo -c -o mast-diagram.o `test -f 'diagram.c' || echo './'`diagram.c
3022:info:build mv -f .deps/ame-ame.Tpo .deps/ame-ame.Po
3023:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mast-mast.o -MD -MP -MF .deps/mast-mast.Tpo -c -o mast-mast.o `test -f 'mast.c' || echo './'`mast.c
3024:info:build mv -f .deps/glam2mask-glam2_util.Tpo .deps/glam2mask-glam2_util.Po
3025:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT mcast-mcast.o -MD -MP -MF .deps/mcast-mcast.Tpo -c -o mcast-mcast.o `test -f 'mcast.c' || echo './'`mcast.c
3026:info:build mv -f .deps/glam2scan-glam2_dirichlet.Tpo .deps/glam2scan-glam2_dirichlet.Po
3027:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT meme2alph-meme2alph.o -MD -MP -MF .deps/meme2alph-meme2alph.Tpo -c -o meme2alph-meme2alph.o `test -f 'meme2alph.c' || echo './'`meme2alph.c
3028:info:build mv -f .deps/gomo-merger.Tpo .deps/gomo-merger.Po
3029:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT meme2images-meme2images.o -MD -MP -MF .deps/meme2images-meme2images.Tpo -c -o meme2images-meme2images.o `test -f 'meme2images.c' || echo './'`meme2images.c
3030:info:build mv -f .deps/import_html_template-import-html-template.Tpo .deps/import_html_template-import-html-template.Po
3031:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT meme2meme-meme2meme.o -MD -MP -MF .deps/meme2meme-meme2meme.Tpo -c -o meme2meme-meme2meme.o `test -f 'meme2meme.c' || echo './'`meme2meme.c
3032:info:build mv -f .deps/gomo-read_csv.Tpo .deps/gomo-read_csv.Po
3033:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT meme_get_motif-meme-get-motif.o -MD -MP -MF .deps/meme_get_motif-meme-get-motif.Tpo -c -o meme_get_motif-meme-get-motif.o `test -f 'meme-get-motif.c' || echo './'`meme-get-motif.c
3034:info:build mv -f .deps/llr-logs.Tpo .deps/llr-logs.Po
3035:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT motif_shuffle_columns-motif-shuffle-columns.o -MD -MP -MF .deps/motif_shuffle_columns-motif-shuffle-columns.Tpo -c -o motif_shuffle_columns-motif-shuffle-columns.o `test -f 'motif-shuffle-columns.c' || echo './'`motif-shuffle-columns.c
3036:info:build mv -f .deps/glam2scan-glam2_scan.Tpo .deps/glam2scan-glam2_scan.Po
3037:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMOTIPH  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT motiph-motiph.o -MD -MP -MF .deps/motiph-motiph.Tpo -c -o motiph-motiph.o `test -f 'motiph.c' || echo './'`motiph.c
3038:info:build mv -f .deps/mast-diagram.Tpo .deps/mast-diagram.Po
3039:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMOTIPH  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT pmp_bf-pmp_bf.o -MD -MP -MF .deps/pmp_bf-pmp_bf.Tpo -c -o pmp_bf-pmp_bf.o `test -f 'pmp_bf.c' || echo './'`pmp_bf.c
3040:info:build mv -f .deps/meme2alph-meme2alph.Tpo .deps/meme2alph-meme2alph.Po
3041:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ramen-ramen.o -MD -MP -MF .deps/ramen-ramen.Tpo -c -o ramen-ramen.o `test -f 'ramen.c' || echo './'`ramen.c
3042:info:build mv -f .deps/gomo-ranksum_test.Tpo .deps/gomo-ranksum_test.Po
3043:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ramen-ramen_scan.o -MD -MP -MF .deps/ramen-ramen_scan.Tpo -c -o ramen-ramen_scan.o `test -f 'ramen_scan.c' || echo './'`ramen_scan.c
3044:info:build mv -f .deps/meme2images-meme2images.Tpo .deps/meme2images-meme2images.Po
3045:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT spamo-cisml-sax.o -MD -MP -MF .deps/spamo-cisml-sax.Tpo -c -o spamo-cisml-sax.o `test -f 'cisml-sax.c' || echo './'`cisml-sax.c
3046:info:build mv -f .deps/meme_get_motif-meme-get-motif.Tpo .deps/meme_get_motif-meme-get-motif.Po
3047:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT spamo-spamo.o -MD -MP -MF .deps/spamo-spamo.Tpo -c -o spamo-spamo.o `test -f 'spamo.c' || echo './'`spamo.c
3048:info:build mv -f .deps/fitevd-fitevd.Tpo .deps/fitevd-fitevd.Po
3049:info:build mv -f .deps/glam2scan-glam2_util.Tpo .deps/glam2scan-glam2_util.Po
3050:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT spamo-spamo-matches.o -MD -MP -MF .deps/spamo-spamo-matches.Tpo -c -o spamo-spamo-matches.o `test -f 'spamo-matches.c' || echo './'`spamo-matches.c
3051:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT spamo-spamo-output.o -MD -MP -MF .deps/spamo-spamo-output.Tpo -c -o spamo-spamo-output.o `test -f 'spamo-output.c' || echo './'`spamo-output.c
3052:info:build mv -f .deps/motif_shuffle_columns-motif-shuffle-columns.Tpo .deps/motif_shuffle_columns-motif-shuffle-columns.Po
3053:info:build mv -f .deps/meme2meme-meme2meme.Tpo .deps/meme2meme-meme2meme.Po
3054:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT spamo-spamo-scan.o -MD -MP -MF .deps/spamo-spamo-scan.Tpo -c -o spamo-spamo-scan.o `test -f 'spamo-scan.c' || echo './'`spamo-scan.c
3055:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT tomtom-tomtom.o -MD -MP -MF .deps/tomtom-tomtom.Tpo -c -o tomtom-tomtom.o `test -f 'tomtom.c' || echo './'`tomtom.c
3056:info:build mv -f .deps/gomo-gomo_highlight.Tpo .deps/gomo-gomo_highlight.Po
3057:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT qvalue-qvalue.o -MD -MP -MF .deps/qvalue-qvalue.Tpo -c -o qvalue-qvalue.o `test -f 'qvalue.c' || echo './'`qvalue.c
3058:info:build mv -f .deps/gomo_highlight-gomo_highlight.Tpo .deps/gomo_highlight-gomo_highlight.Po
3059:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ranksum_test-ranksum_test.o -MD -MP -MF .deps/ranksum_test-ranksum_test.Tpo -c -o ranksum_test-ranksum_test.o `test -f 'ranksum_test.c' || echo './'`ranksum_test.c
3060:info:build mv -f .deps/pmp_bf-pmp_bf.Tpo .deps/pmp_bf-pmp_bf.Po
3061:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT reconcile_tree_alignment-reconcile-tree-alignment.o -MD -MP -MF .deps/reconcile_tree_alignment-reconcile-tree-alignment.Tpo -c -o reconcile_tree_alignment-reconcile-tree-alignment.o `test -f 'reconcile-tree-alignment.c' || echo './'`reconcile-tree-alignment.c
3062:info:build mv -f .deps/ramen-ramen_scan.Tpo .deps/ramen-ramen_scan.Po
3063:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT reduce_alignment-reduce-alignment.o -MD -MP -MF .deps/reduce_alignment-reduce-alignment.Tpo -c -o reduce_alignment-reduce-alignment.o `test -f 'reduce-alignment.c' || echo './'`reduce-alignment.c
3064:info:build mv -f .deps/motiph-motiph.Tpo .deps/motiph-motiph.Po
3065:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT remove_alignment_gaps-remove-alignment-gaps.o -MD -MP -MF .deps/remove_alignment_gaps-remove-alignment-gaps.Tpo -c -o remove_alignment_gaps-remove-alignment-gaps.o `test -f 'remove-alignment-gaps.c' || echo './'`remove-alignment-gaps.c
3066:info:build mv -f .deps/spamo-spamo-output.Tpo .deps/spamo-spamo-output.Po
3067:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I..   -I/opt/local/include  -I/opt/local/include/libxml2  -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT xsltproc_lite-xsltproc_lite.o -MD -MP -MF .deps/xsltproc_lite-xsltproc_lite.Tpo -c -o xsltproc_lite-xsltproc_lite.o `test -f 'xsltproc_lite.c' || echo './'`xsltproc_lite.c
3068:info:build mv -f .deps/spamo-cisml-sax.Tpo .deps/spamo-cisml-sax.Po
3069:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -fno-strict-aliasing  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o libcommon.la  libcommon_la-alignment.lo libcommon_la-alph-in.lo libcommon_la-alphabet.lo libcommon_la-array.lo libcommon_la-array-list.lo libcommon_la-binary-search.lo libcommon_la-binomial.lo libcommon_la-build-hmm.lo libcommon_la-buffer.lo libcommon_la-ceqlogo.lo libcommon_la-cisml.lo libcommon_la-cisml-sax.lo libcommon_la-clustalw-io.lo libcommon_la-dp.lo libcommon_la-dreme-sax.lo libcommon_la-eps2png.lo libcommon_la-empirical-qvalue.lo libcommon_la-evomodel.lo libcommon_la-fasta-io.lo libcommon_la-fitevd.lo libcommon_la-gendb.lo libcommon_la-hash_table.lo libcommon_la-heap.lo libcommon_la-html-data.lo libcommon_la-html-monolith.lo libcommon_la-io.lo libcommon_la-json-checker.lo libcommon_la-json-reader.lo libcommon_la-json-writer.lo libcommon_la-karlin.lo libcommon_la-linked-list.lo libcommon_la-log-hmm.lo libcommon_la-logodds.lo libcommon_la-mast-util.lo libcommon_la-match.lo libcommon_la-matrix.lo libcommon_la-mcast-match.lo libcommon_la-meme-sax.lo libcommon_la-metameme.lo libcommon_la-mhmm.lo libcommon_la-mhmms.lo libcommon_la-mhmmscan.lo libcommon_la-mhmm-state.lo libcommon_la-motif-in.lo libcommon_la-motif-in-common.lo libcommon_la-motif-in-dreme-xml.lo libcommon_la-motif-in-meme-html.lo libcommon_la-motif-in-meme-json.lo libcommon_la-motif-in-meme-text.lo libcommon_la-motif-in-meme-xml.lo libcommon_la-motif.lo libcommon_la-motif_regexp.lo libcommon_la-motifs.lo libcommon_la-motiph-scoring.lo libcommon_la-mtwist.lo libcommon_la-object-list.lo libcommon_la-order.lo libcommon_la-data-block.lo libcommon_la-data-block-reader.lo libcommon_la-parser-message.lo libcommon_la-prealigned-io.lo libcommon_la-prior-reader-from-psp.lo libcommon_la-prior-reader-from-wig.lo libcommon_la-prior-dist.lo libcommon_la-pssm.lo libcommon_la-pssm-distr.lo libcommon_la-qvalue.lo libcommon_la-ranksum_test.lo libcommon_la-rdb-matrix.lo libcommon_la-read-mhmm.lo libcommon_la-read_sequence.lo libcommon_la-red-black-tree.lo libcommon_la-regex-utils.lo libcommon_la-regress.lo libcommon_la-reservoir.lo libcommon_la-sax-parser-utils.lo libcommon_la-scanned-sequence.lo libcommon_la-scored-sites.lo libcommon_la-seq.lo libcommon_la-seq-reader-from-fasta.lo libcommon_la-simple-getopt.lo libcommon_la-spearman-rank-correlation.lo libcommon_la-string-builder.lo libcommon_la-string-list.lo libcommon_la-string-match.lo libcommon_la-subst-matrix.lo libcommon_la-substmatrix-table.lo libcommon_la-transfac.lo libcommon_la-tree.lo libcommon_la-utils.lo libcommon_la-wiggle-reader.lo libcommon_la-write-mhmm.lo libcommon_la-xlate-in.lo libcommon_la-xml-out.lo libcommon_la-xml-util.lo -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -L/opt/local/lib -lxslt -lxml2 -lz -llzma -lpthread -liconv -lm -lexslt  -lm -lz
3070:info:build mv -f .deps/spamo-spamo-scan.Tpo .deps/spamo-spamo-scan.Po
3071:info:build mv -f .deps/llr-llr.Tpo .deps/llr-llr.Po
3072:info:build mv -f .deps/reconcile_tree_alignment-reconcile-tree-alignment.Tpo .deps/reconcile_tree_alignment-reconcile-tree-alignment.Po
3073:info:build mv -f .deps/reduce_alignment-reduce-alignment.Tpo .deps/reduce_alignment-reduce-alignment.Po
3074:info:build mv -f .deps/ramen-ramen.Tpo .deps/ramen-ramen.Po
3075:info:build mv -f .deps/mcast-mcast.Tpo .deps/mcast-mcast.Po
3076:info:build mv -f .deps/qvalue-qvalue.Tpo .deps/qvalue-qvalue.Po
3077:info:build mv -f .deps/remove_alignment_gaps-remove-alignment-gaps.Tpo .deps/remove_alignment_gaps-remove-alignment-gaps.Po
3078:info:build mv -f .deps/gomo-gomo.Tpo .deps/gomo-gomo.Po
3079:info:build mv -f .deps/xsltproc_lite-xsltproc_lite.Tpo .deps/xsltproc_lite-xsltproc_lite.Po
3080:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2  -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o xsltproc_lite xsltproc_lite-xsltproc_lite.o -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm  -L/opt/local/lib -lxslt -lxml2 -lz -llzma -lpthread -liconv -lm -lexslt -lm -lz
3081:info:build mv -f .deps/spamo-spamo-matches.Tpo .deps/spamo-spamo-matches.Po
3082:info:build mv -f .deps/ranksum_test-ranksum_test.Tpo .deps/ranksum_test-ranksum_test.Po
3083:info:build mv -f .deps/spamo-spamo.Tpo .deps/spamo-spamo.Po
3084:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o xsltproc_lite xsltproc_lite-xsltproc_lite.o  -L/opt/local/lib -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3085:info:build mv -f .deps/mast-mast.Tpo .deps/mast-mast.Po
3086:info:build mv -f .deps/tomtom-tomtom.Tpo .deps/tomtom-tomtom.Po
3087:info:build libtool: link: ar cru .libs/libcommon.a .libs/libcommon_la-alignment.o .libs/libcommon_la-alph-in.o .libs/libcommon_la-alphabet.o .libs/libcommon_la-array.o .libs/libcommon_la-array-list.o .libs/libcommon_la-binary-search.o .libs/libcommon_la-binomial.o .libs/libcommon_la-build-hmm.o .libs/libcommon_la-buffer.o .libs/libcommon_la-ceqlogo.o .libs/libcommon_la-cisml.o .libs/libcommon_la-cisml-sax.o .libs/libcommon_la-clustalw-io.o .libs/libcommon_la-dp.o .libs/libcommon_la-dreme-sax.o .libs/libcommon_la-eps2png.o .libs/libcommon_la-empirical-qvalue.o .libs/libcommon_la-evomodel.o .libs/libcommon_la-fasta-io.o .libs/libcommon_la-fitevd.o .libs/libcommon_la-gendb.o .libs/libcommon_la-hash_table.o .libs/libcommon_la-heap.o .libs/libcommon_la-html-data.o .libs/libcommon_la-html-monolith.o .libs/libcommon_la-io.o .libs/libcommon_la-json-checker.o .libs/libcommon_la-json-reader.o .libs/libcommon_la-json-writer.o .libs/libcommon_la-karlin.o .libs/libcommon_la-linked-list.o .libs/libcommon_la-log-hmm.o .libs/libcommon_la-logodds.o .libs/libcommon_la-mast-util.o .libs/libcommon_la-match.o .libs/libcommon_la-matrix.o .libs/libcommon_la-mcast-match.o .libs/libcommon_la-meme-sax.o .libs/libcommon_la-metameme.o .libs/libcommon_la-mhmm.o .libs/libcommon_la-mhmms.o .libs/libcommon_la-mhmmscan.o .libs/libcommon_la-mhmm-state.o .libs/libcommon_la-motif-in.o .libs/libcommon_la-motif-in-common.o .libs/libcommon_la-motif-in-dreme-xml.o .libs/libcommon_la-motif-in-meme-html.o .libs/libcommon_la-motif-in-meme-json.o .libs/libcommon_la-motif-in-meme-text.o .libs/libcommon_la-motif-in-meme-xml.o .libs/libcommon_la-motif.o .libs/libcommon_la-motif_regexp.o .libs/libcommon_la-motifs.o .libs/libcommon_la-motiph-scoring.o .libs/libcommon_la-mtwist.o .libs/libcommon_la-object-list.o .libs/libcommon_la-order.o .libs/libcommon_la-data-block.o .libs/libcommon_la-data-block-reader.o .libs/libcommon_la-parser-message.o .libs/libcommon_la-prealigned-io.o .libs/libcommon_la-prior-reader-from-psp.o .libs/libcommon_la-prior-reader-from-wig.o .libs/libcommon_la-prior-dist.o .libs/libcommon_la-pssm.o .libs/libcommon_la-pssm-distr.o .libs/libcommon_la-qvalue.o .libs/libcommon_la-ranksum_test.o .libs/libcommon_la-rdb-matrix.o .libs/libcommon_la-read-mhmm.o .libs/libcommon_la-read_sequence.o .libs/libcommon_la-red-black-tree.o .libs/libcommon_la-regex-utils.o .libs/libcommon_la-regress.o .libs/libcommon_la-reservoir.o .libs/libcommon_la-sax-parser-utils.o .libs/libcommon_la-scanned-sequence.o .libs/libcommon_la-scored-sites.o .libs/libcommon_la-seq.o .libs/libcommon_la-seq-reader-from-fasta.o .libs/libcommon_la-simple-getopt.o .libs/libcommon_la-spearman-rank-correlation.o .libs/libcommon_la-string-builder.o .libs/libcommon_la-string-list.o .libs/libcommon_la-string-match.o .libs/libcommon_la-subst-matrix.o .libs/libcommon_la-substmatrix-table.o .libs/libcommon_la-transfac.o .libs/libcommon_la-tree.o .libs/libcommon_la-utils.o .libs/libcommon_la-wiggle-reader.o .libs/libcommon_la-write-mhmm.o .libs/libcommon_la-xlate-in.o .libs/libcommon_la-xml-out.o .libs/libcommon_la-xml-util.o
3088:info:build libtool: link: ranlib .libs/libcommon.a
3089:info:build libtool: link: ( cd ".libs" && rm -f "libcommon.la" && ln -s "../libcommon.la" "libcommon.la" )
3090:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o alphtype alphtype-alphtype.o libcommon.la -lz
3091:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o ama ama-ama.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3092:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o ame ame-ame.o ame-ramen_scan.o ame-fisher_exact.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lm  -lz
3093:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DCL_MAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o ceqlogo ceqlogo-ceqlogo.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3094:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o clustalw2fasta clustalw2fasta-clustalw2fasta.o libcommon.la -lz
3095:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o centrimo centrimo-centrimo.o centrimo-fisher_exact.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3096:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o clustalw2phylip clustalw2phylip-clustalw2phylip.o libcommon.la -lz
3097:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o compute-prior-dist compute_prior_dist-compute-prior-dist.o libcommon.la -lz
3098:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o compute-uniform-priors compute_uniform_priors-compute-uniform-priors.o libcommon.la -lz
3099:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o fasta-get-markov fasta_get_markov-fasta-get-markov.o libcommon.la -lz
3100:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o fasta-shuffle-letters fasta_shuffle_letters-fasta-shuffle-letters.o fasta_shuffle_letters-ushuffle.o libcommon.la -lz
3101:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o create-priors create_priors-create-priors.o libcommon.la -lz -lz
3102:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DFE_MAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o fisher_exact fisher_exact-fisher_exact.o libcommon.la  -lz
3103:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o fimo fimo-fimo.o fimo-fimo-output.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3104:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o fitevd fitevd-fitevd.o libcommon.la -lz
3105:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o gendb gendb-gendb.o libcommon.la -lz
3106:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o alphtype alphtype-alphtype.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3107:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o clustalw2fasta clustalw2fasta-clustalw2fasta.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3108:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o clustalw2phylip clustalw2phylip-clustalw2phylip.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3109:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o fasta-get-markov fasta_get_markov-fasta-get-markov.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3110:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o compute-uniform-priors compute_uniform_priors-compute-uniform-priors.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3111:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o gendb gendb-gendb.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3112:info:build libtool: link: /usr/bin/clang -DFE_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o fisher_exact fisher_exact-fisher_exact.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3113:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o create-priors create_priors-create-priors.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3114:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o compute-prior-dist compute_prior_dist-compute-prior-dist.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3115:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o fitevd fitevd-fitevd.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3116:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o fasta-shuffle-letters fasta_shuffle_letters-fasta-shuffle-letters.o fasta_shuffle_letters-ushuffle.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3117:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o getsize getsize.o libcommon.la -lz
3118:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o glam2 glam2-glam2_alphabet.o glam2-glam2_args.o glam2-glam2_column_sample.o glam2-glam2_dirichlet.o glam2-glam2_dna_prior.o glam2-glam2_fasta.o glam2-glam2_glam2.o glam2-glam2_glam2_aln.o glam2-glam2_init.o glam2-glam2_output.o glam2-glam2_recode3_20comp.o glam2-glam2_site_sample.o glam2-glam2_util.o libcommon.la -lz
3119:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o ama ama-ama.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3120:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o glam2format glam2format-glam2_glam2format.o glam2format-glam2_alignment.o glam2format-glam2_fasta.o glam2format-glam2_util.o libcommon.la -lz
3121:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o glam2mask glam2mask-glam2_glam2mask.o glam2mask-glam2_alignment.o glam2mask-glam2_fasta.o glam2mask-glam2_util.o libcommon.la -lz
3122:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o glam2scan glam2scan-glam2_alignment.o glam2scan-glam2_alphabet.o glam2scan-glam2_dna_prior.o glam2scan-glam2_fasta.o glam2scan-glam2_dirichlet.o glam2scan-glam2_heap.o glam2scan-glam2_motif.o glam2scan-glam2_scan.o glam2scan-glam2_scan_args.o glam2scan-glam2_scan_init.o glam2scan-glam2_scan_output.o glam2scan-glam2_recode3_20comp.o glam2scan-glam2_util.o libcommon.la -lz
3123:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o gomo gomo-gomo.o gomo-gomo_highlight.o gomo-merger.o gomo-ranksum_test.o gomo-read_csv.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -L/opt/local/lib -lxslt -lxml2 -lz -llzma -lpthread -liconv -lm -lexslt -lz
3124:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o gomo_highlight gomo_highlight-gomo_highlight.o libcommon.la -lz
3125:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o import-html-template import_html_template-import-html-template.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3126:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o llr llr-llr.o llr-logs.o libcommon.la  -lz
3127:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o centrimo centrimo-centrimo.o centrimo-fisher_exact.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3128:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o mast mast-diagram.o mast-mast.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3129:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o mcast mcast-mcast.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3130:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o fimo fimo-fimo.o fimo-fimo-output.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3131:info:build libtool: link: /usr/bin/clang -DCL_MAIN -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o ceqlogo ceqlogo-ceqlogo.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3132:info:build libtool: link: /usr/bin/clang -DMAIN -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o ame ame-ame.o ame-ramen_scan.o ame-fisher_exact.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3133:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o meme2alph meme2alph-meme2alph.o libcommon.la -lz
3134:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o meme2images meme2images-meme2images.o libcommon.la -lz
3135:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o meme2meme meme2meme-meme2meme.o libcommon.la -lz
3136:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o meme-get-motif meme_get_motif-meme-get-motif.o libcommon.la -lz
3137:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o motif-shuffle-columns motif_shuffle_columns-motif-shuffle-columns.o libcommon.la  -lz
3138:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o llr llr-llr.o llr-logs.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3139:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o gomo_highlight gomo_highlight-gomo_highlight.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3140:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o getsize getsize.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3141:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o glam2format glam2format-glam2_glam2format.o glam2format-glam2_alignment.o glam2format-glam2_fasta.o glam2format-glam2_util.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3142:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o mcast mcast-mcast.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3143:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o glam2mask glam2mask-glam2_glam2mask.o glam2mask-glam2_alignment.o glam2mask-glam2_fasta.o glam2mask-glam2_util.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3144:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o import-html-template import_html_template-import-html-template.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3145:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMOTIPH  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o motiph motiph-motiph.o libcommon.la  -lz
3146:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMOTIPH  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o pmp_bf pmp_bf-pmp_bf.o libcommon.la  -lz
3147:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o mast mast-diagram.o mast-mast.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3148:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o ramen ramen-ramen.o ramen-ramen_scan.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lm  -lz
3149:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o glam2scan glam2scan-glam2_alignment.o glam2scan-glam2_alphabet.o glam2scan-glam2_dna_prior.o glam2scan-glam2_fasta.o glam2scan-glam2_dirichlet.o glam2scan-glam2_heap.o glam2scan-glam2_motif.o glam2scan-glam2_scan.o glam2scan-glam2_scan_args.o glam2scan-glam2_scan_init.o glam2scan-glam2_scan_output.o glam2scan-glam2_recode3_20comp.o glam2scan-glam2_util.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3150:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o meme2images meme2images-meme2images.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3151:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o meme2alph meme2alph-meme2alph.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3152:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o glam2 glam2-glam2_alphabet.o glam2-glam2_args.o glam2-glam2_column_sample.o glam2-glam2_dirichlet.o glam2-glam2_dna_prior.o glam2-glam2_fasta.o glam2-glam2_glam2.o glam2-glam2_glam2_aln.o glam2-glam2_init.o glam2-glam2_output.o glam2-glam2_recode3_20comp.o glam2-glam2_site_sample.o glam2-glam2_util.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3153:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o spamo spamo-cisml-sax.o spamo-spamo.o spamo-spamo-matches.o spamo-spamo-output.o spamo-spamo-scan.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3154:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o tomtom tomtom-tomtom.o libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3155:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o meme2meme meme2meme-meme2meme.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3156:info:build libtool: link: /usr/bin/clang -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o meme-get-motif meme_get_motif-meme-get-motif.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3157:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o qvalue qvalue-qvalue.o libcommon.la -lm -lz
3158:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o ranksum_test ranksum_test-ranksum_test.o libcommon.la -lm -lz
3159:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o reconcile-tree-alignment reconcile_tree_alignment-reconcile-tree-alignment.o libcommon.la -lm -lz
3160:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o reduce-alignment reduce_alignment-reduce-alignment.o libcommon.la -lm -lz
3161:info:build /bin/sh ../libtool  --tag=CC   --mode=link /usr/bin/clang -DMAIN  -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o remove-alignment-gaps remove_alignment_gaps-remove-alignment-gaps.o libcommon.la -lm -lz
3162:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o motif-shuffle-columns motif_shuffle_columns-motif-shuffle-columns.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3163:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -I/opt/local/include -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o gomo gomo-gomo.o gomo-gomo_highlight.o gomo-merger.o gomo-ranksum_test.o gomo-read_csv.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lm -lexslt -lz
3164:info:build libtool: link: /usr/bin/clang -DMOTIPH -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o motiph motiph-motiph.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3165:info:build libtool: link: /usr/bin/clang -DMOTIPH -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o pmp_bf pmp_bf-pmp_bf.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3166:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o qvalue qvalue-qvalue.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3167:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o ranksum_test ranksum_test-ranksum_test.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3168:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o remove-alignment-gaps remove_alignment_gaps-remove-alignment-gaps.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3169:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o reconcile-tree-alignment reconcile_tree_alignment-reconcile-tree-alignment.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3170:info:build libtool: link: /usr/bin/clang -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o reduce-alignment reduce_alignment-reduce-alignment.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lxml2 -llzma -lpthread -liconv -lexslt -lm -lz
3171:info:build libtool: link: /usr/bin/clang -DMAIN -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o tomtom tomtom-tomtom.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3172:info:build libtool: link: /usr/bin/clang -DMAIN -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o ramen ramen-ramen.o ramen-ramen_scan.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3173:info:build libtool: link: /usr/bin/clang -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o spamo spamo-cisml-sax.o spamo-spamo.o spamo-spamo-matches.o spamo-spamo-output.o spamo-spamo-scan.o  -L/opt/local/lib ./.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3174:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
3175:info:build Making all in parallel
3176:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/parallel'
3177:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-banner.o -MD -MP -MF ../.deps/meme-banner.Tpo -c -o ../meme-banner.o `test -f '../banner.c' || echo './'`../banner.c
3178:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-branching_search.o -MD -MP -MF ../.deps/meme-branching_search.Tpo -c -o ../meme-branching_search.o `test -f '../branching_search.c' || echo './'`../branching_search.c
3179:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-calculate_p_y.o -MD -MP -MF ../.deps/meme-calculate_p_y.Tpo -c -o ../meme-calculate_p_y.o `test -f '../calculate_p_y.c' || echo './'`../calculate_p_y.c
3180:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-discretize.o -MD -MP -MF ../.deps/meme-discretize.Tpo -c -o ../meme-discretize.o `test -f '../discretize.c' || echo './'`../discretize.c
3181:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-display.o -MD -MP -MF ../.deps/meme-display.Tpo -c -o ../meme-display.o `test -f '../display.c' || echo './'`../display.c
3182:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-dpalign.o -MD -MP -MF ../.deps/meme-dpalign.Tpo -c -o ../meme-dpalign.o `test -f '../dpalign.c' || echo './'`../dpalign.c
3183:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-em.o -MD -MP -MF ../.deps/meme-em.Tpo -c -o ../meme-em.o `test -f '../em.c' || echo './'`../em.c
3184:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-exec_parallel.o -MD -MP -MF ../.deps/meme-exec_parallel.Tpo -c -o ../meme-exec_parallel.o `test -f '../exec_parallel.c' || echo './'`../exec_parallel.c
3185:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-fisher_exact.o -MD -MP -MF ../.deps/meme-fisher_exact.Tpo -c -o ../meme-fisher_exact.o `test -f '../fisher_exact.c' || echo './'`../fisher_exact.c
3186:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-init.o -MD -MP -MF ../.deps/meme-init.Tpo -c -o ../meme-init.o `test -f '../init.c' || echo './'`../init.c
3187:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-justlike.o -MD -MP -MF ../.deps/meme-justlike.Tpo -c -o ../meme-justlike.o `test -f '../justlike.c' || echo './'`../justlike.c
3188:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-likelihood.o -MD -MP -MF ../.deps/meme-likelihood.Tpo -c -o ../meme-likelihood.o `test -f '../likelihood.c' || echo './'`../likelihood.c
3189:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-llr.o -MD -MP -MF ../.deps/meme-llr.Tpo -c -o ../meme-llr.o `test -f '../llr.c' || echo './'`../llr.c
3190:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-logs.o -MD -MP -MF ../.deps/meme-logs.Tpo -c -o ../meme-logs.o `test -f '../logs.c' || echo './'`../logs.c
3191:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-meme.o -MD -MP -MF ../.deps/meme-meme.Tpo -c -o ../meme-meme.o `test -f '../meme.c' || echo './'`../meme.c
3192:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-meme_util.o -MD -MP -MF ../.deps/meme-meme_util.Tpo -c -o ../meme-meme_util.o `test -f '../meme_util.c' || echo './'`../meme_util.c
3193:info:build mv -f ../.deps/meme-logs.Tpo ../.deps/meme-logs.Po
3194:info:build mv -f ../.deps/meme-banner.Tpo ../.deps/meme-banner.Po
3195:info:build mv -f ../.deps/meme-justlike.Tpo ../.deps/meme-justlike.Po
3196:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-message.o -MD -MP -MF ../.deps/meme-message.Tpo -c -o ../meme-message.o `test -f '../message.c' || echo './'`../message.c
3197:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-mp.o -MD -MP -MF ../.deps/meme-mp.Tpo -c -o ../meme-mp.o `test -f '../mp.c' || echo './'`../mp.c
3198:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-oops.o -MD -MP -MF ../.deps/meme-oops.Tpo -c -o ../meme-oops.o `test -f '../oops.c' || echo './'`../oops.c
3199:info:build mv -f ../.deps/meme-exec_parallel.Tpo ../.deps/meme-exec_parallel.Po
3200:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-partition.o -MD -MP -MF ../.deps/meme-partition.Tpo -c -o ../meme-partition.o `test -f '../partition.c' || echo './'`../partition.c
3201:info:build mv -f ../.deps/meme-mp.Tpo ../.deps/meme-mp.Po
3202:info:build mv -f ../.deps/meme-message.Tpo ../.deps/meme-message.Po
3203:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-prior.o -MD -MP -MF ../.deps/meme-prior.Tpo -c -o ../meme-prior.o `test -f '../prior.c' || echo './'`../prior.c
3204:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-psp.o -MD -MP -MF ../.deps/meme-psp.Tpo -c -o ../meme-psp.o `test -f '../psp.c' || echo './'`../psp.c
3205:info:build mv -f ../.deps/meme-em.Tpo ../.deps/meme-em.Po
3206:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-read_seq_file.o -MD -MP -MF ../.deps/meme-read_seq_file.Tpo -c -o ../meme-read_seq_file.o `test -f '../read_seq_file.c' || echo './'`../read_seq_file.c
3207:info:build mv -f ../.deps/meme-branching_search.Tpo ../.deps/meme-branching_search.Po
3208:info:build mv -f ../.deps/meme-likelihood.Tpo ../.deps/meme-likelihood.Po
3209:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-seed.o -MD -MP -MF ../.deps/meme-seed.Tpo -c -o ../meme-seed.o `test -f '../seed.c' || echo './'`../seed.c
3210:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-seed_diffs.o -MD -MP -MF ../.deps/meme-seed_diffs.Tpo -c -o ../meme-seed_diffs.o `test -f '../seed_diffs.c' || echo './'`../seed_diffs.c
3211:info:build mv -f ../.deps/meme-fisher_exact.Tpo ../.deps/meme-fisher_exact.Po
3212:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-seq2theta.o -MD -MP -MF ../.deps/meme-seq2theta.Tpo -c -o ../meme-seq2theta.o `test -f '../seq2theta.c' || echo './'`../seq2theta.c
3213:info:build mv -f ../.deps/meme-partition.Tpo ../.deps/meme-partition.Po
3214:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-sp_matrix.o -MD -MP -MF ../.deps/meme-sp_matrix.Tpo -c -o ../meme-sp_matrix.o `test -f '../sp_matrix.c' || echo './'`../sp_matrix.c
3215:info:build mv -f ../.deps/meme-seed.Tpo ../.deps/meme-seed.Po
3216:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-starts.o -MD -MP -MF ../.deps/meme-starts.Tpo -c -o ../meme-starts.o `test -f '../starts.c' || echo './'`../starts.c
3217:info:build mv -f ../.deps/meme-calculate_p_y.Tpo ../.deps/meme-calculate_p_y.Po
3218:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-subseq7.o -MD -MP -MF ../.deps/meme-subseq7.Tpo -c -o ../meme-subseq7.o `test -f '../subseq7.c' || echo './'`../subseq7.c
3219:info:build mv -f ../.deps/meme-prior.Tpo ../.deps/meme-prior.Po
3220:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-tcm.o -MD -MP -MF ../.deps/meme-tcm.Tpo -c -o ../meme-tcm.o `test -f '../tcm.c' || echo './'`../tcm.c
3221:info:build mv -f ../.deps/meme-seed_diffs.Tpo ../.deps/meme-seed_diffs.Po
3222:info:build mv -f ../.deps/meme-meme.Tpo ../.deps/meme-meme.Po
3223:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-ushuffle.o -MD -MP -MF ../.deps/meme-ushuffle.Tpo -c -o ../meme-ushuffle.o `test -f '../ushuffle.c' || echo './'`../ushuffle.c
3224:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../meme-verbosity.o -MD -MP -MF ../.deps/meme-verbosity.Tpo -c -o ../meme-verbosity.o `test -f '../verbosity.c' || echo './'`../verbosity.c
3225:info:build mv -f ../.deps/meme-meme_util.Tpo ../.deps/meme-meme_util.Po
3226:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo.o -MD -MP -MF ../.deps/momo-momo.Tpo -c -o ../momo-momo.o `test -f '../momo.c' || echo './'`../momo.c
3227:info:build mv -f ../.deps/meme-llr.Tpo ../.deps/meme-llr.Po
3228:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-output.o -MD -MP -MF ../.deps/momo-momo-output.Tpo -c -o ../momo-momo-output.o `test -f '../momo-output.c' || echo './'`../momo-output.c
3229:info:build mv -f ../.deps/meme-dpalign.Tpo ../.deps/meme-dpalign.Po
3230:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-algorithm.o -MD -MP -MF ../.deps/momo-momo-algorithm.Tpo -c -o ../momo-momo-algorithm.o `test -f '../momo-algorithm.c' || echo './'`../momo-algorithm.c
3231:info:build mv -f ../.deps/meme-seq2theta.Tpo ../.deps/meme-seq2theta.Po
3232:info:build mv -f ../.deps/meme-oops.Tpo ../.deps/meme-oops.Po
3233:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-simple.o -MD -MP -MF ../.deps/momo-momo-simple.Tpo -c -o ../momo-momo-simple.o `test -f '../momo-simple.c' || echo './'`../momo-simple.c
3234:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-motifx.o -MD -MP -MF ../.deps/momo-momo-motifx.Tpo -c -o ../momo-momo-motifx.o `test -f '../momo-motifx.c' || echo './'`../momo-motifx.c
3235:info:build mv -f ../.deps/meme-verbosity.Tpo ../.deps/meme-verbosity.Po
3236:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-modl.o -MD -MP -MF ../.deps/momo-momo-modl.Tpo -c -o ../momo-momo-modl.o `test -f '../momo-modl.c' || echo './'`../momo-modl.c
3237:info:build mv -f ../.deps/meme-read_seq_file.Tpo ../.deps/meme-read_seq_file.Po
3238:info:build mv -f ../.deps/meme-discretize.Tpo ../.deps/meme-discretize.Po
3239:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-momo-input.o -MD -MP -MF ../.deps/momo-momo-input.Tpo -c -o ../momo-momo-input.o `test -f '../momo-input.c' || echo './'`../momo-input.c
3240:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-banner.o -MD -MP -MF ../.deps/momo-banner.Tpo -c -o ../momo-banner.o `test -f '../banner.c' || echo './'`../banner.c
3241:info:build mv -f ../.deps/meme-sp_matrix.Tpo ../.deps/meme-sp_matrix.Po
3242:info:build mv -f ../.deps/meme-starts.Tpo ../.deps/meme-starts.Po
3243:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-branching_search.o -MD -MP -MF ../.deps/momo-branching_search.Tpo -c -o ../momo-branching_search.o `test -f '../branching_search.c' || echo './'`../branching_search.c
3244:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-calculate_p_y.o -MD -MP -MF ../.deps/momo-calculate_p_y.Tpo -c -o ../momo-calculate_p_y.o `test -f '../calculate_p_y.c' || echo './'`../calculate_p_y.c
3245:info:build mv -f ../.deps/meme-ushuffle.Tpo ../.deps/meme-ushuffle.Po
3246:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-discretize.o -MD -MP -MF ../.deps/momo-discretize.Tpo -c -o ../momo-discretize.o `test -f '../discretize.c' || echo './'`../discretize.c
3247:info:build mv -f ../.deps/meme-init.Tpo ../.deps/meme-init.Po
3248:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-display.o -MD -MP -MF ../.deps/momo-display.Tpo -c -o ../momo-display.o `test -f '../display.c' || echo './'`../display.c
3249:info:build mv -f ../.deps/momo-momo-algorithm.Tpo ../.deps/momo-momo-algorithm.Po
3250:info:build mv -f ../.deps/momo-momo-simple.Tpo ../.deps/momo-momo-simple.Po
3251:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-dpalign.o -MD -MP -MF ../.deps/momo-dpalign.Tpo -c -o ../momo-dpalign.o `test -f '../dpalign.c' || echo './'`../dpalign.c
3252:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-em.o -MD -MP -MF ../.deps/momo-em.Tpo -c -o ../momo-em.o `test -f '../em.c' || echo './'`../em.c
3253:info:build mv -f ../.deps/meme-psp.Tpo ../.deps/meme-psp.Po
3254:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-exec_parallel.o -MD -MP -MF ../.deps/momo-exec_parallel.Tpo -c -o ../momo-exec_parallel.o `test -f '../exec_parallel.c' || echo './'`../exec_parallel.c
3255:info:build mv -f ../.deps/meme-tcm.Tpo ../.deps/meme-tcm.Po
3256:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-fisher_exact.o -MD -MP -MF ../.deps/momo-fisher_exact.Tpo -c -o ../momo-fisher_exact.o `test -f '../fisher_exact.c' || echo './'`../fisher_exact.c
3257:info:build mv -f ../.deps/momo-banner.Tpo ../.deps/momo-banner.Po
3258:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-init.o -MD -MP -MF ../.deps/momo-init.Tpo -c -o ../momo-init.o `test -f '../init.c' || echo './'`../init.c
3259:info:build mv -f ../.deps/momo-momo-output.Tpo ../.deps/momo-momo-output.Po
3260:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-justlike.o -MD -MP -MF ../.deps/momo-justlike.Tpo -c -o ../momo-justlike.o `test -f '../justlike.c' || echo './'`../justlike.c
3261:info:build mv -f ../.deps/momo-momo.Tpo ../.deps/momo-momo.Po
3262:info:build mv -f ../.deps/momo-momo-motifx.Tpo ../.deps/momo-momo-motifx.Po
3263:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-likelihood.o -MD -MP -MF ../.deps/momo-likelihood.Tpo -c -o ../momo-likelihood.o `test -f '../likelihood.c' || echo './'`../likelihood.c
3264:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-llr.o -MD -MP -MF ../.deps/momo-llr.Tpo -c -o ../momo-llr.o `test -f '../llr.c' || echo './'`../llr.c
3265:info:build mv -f ../.deps/meme-subseq7.Tpo ../.deps/meme-subseq7.Po
3266:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-logs.o -MD -MP -MF ../.deps/momo-logs.Tpo -c -o ../momo-logs.o `test -f '../logs.c' || echo './'`../logs.c
3267:info:build mv -f ../.deps/momo-branching_search.Tpo ../.deps/momo-branching_search.Po
3268:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-meme.o -MD -MP -MF ../.deps/momo-meme.Tpo -c -o ../momo-meme.o `test -f '../meme.c' || echo './'`../meme.c
3269:info:build mv -f ../.deps/momo-exec_parallel.Tpo ../.deps/momo-exec_parallel.Po
3270:info:build mv -f ../.deps/momo-em.Tpo ../.deps/momo-em.Po
3271:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-meme_util.o -MD -MP -MF ../.deps/momo-meme_util.Tpo -c -o ../momo-meme_util.o `test -f '../meme_util.c' || echo './'`../meme_util.c
3272:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-message.o -MD -MP -MF ../.deps/momo-message.Tpo -c -o ../momo-message.o `test -f '../message.c' || echo './'`../message.c
3273:info:build mv -f ../.deps/momo-justlike.Tpo ../.deps/momo-justlike.Po
3274:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-mp.o -MD -MP -MF ../.deps/momo-mp.Tpo -c -o ../momo-mp.o `test -f '../mp.c' || echo './'`../mp.c
3275:info:build mv -f ../.deps/momo-message.Tpo ../.deps/momo-message.Po
3276:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-oops.o -MD -MP -MF ../.deps/momo-oops.Tpo -c -o ../momo-oops.o `test -f '../oops.c' || echo './'`../oops.c
3277:info:build mv -f ../.deps/momo-momo-input.Tpo ../.deps/momo-momo-input.Po
3278:info:build mv -f ../.deps/momo-mp.Tpo ../.deps/momo-mp.Po
3279:info:build mv -f ../.deps/momo-fisher_exact.Tpo ../.deps/momo-fisher_exact.Po
3280:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-partition.o -MD -MP -MF ../.deps/momo-partition.Tpo -c -o ../momo-partition.o `test -f '../partition.c' || echo './'`../partition.c
3281:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-prior.o -MD -MP -MF ../.deps/momo-prior.Tpo -c -o ../momo-prior.o `test -f '../prior.c' || echo './'`../prior.c
3282:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-psp.o -MD -MP -MF ../.deps/momo-psp.Tpo -c -o ../momo-psp.o `test -f '../psp.c' || echo './'`../psp.c
3283:info:build mv -f ../.deps/momo-logs.Tpo ../.deps/momo-logs.Po
3284:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-read_seq_file.o -MD -MP -MF ../.deps/momo-read_seq_file.Tpo -c -o ../momo-read_seq_file.o `test -f '../read_seq_file.c' || echo './'`../read_seq_file.c
3285:info:build mv -f ../.deps/momo-likelihood.Tpo ../.deps/momo-likelihood.Po
3286:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-seed.o -MD -MP -MF ../.deps/momo-seed.Tpo -c -o ../momo-seed.o `test -f '../seed.c' || echo './'`../seed.c
3287:info:build mv -f ../.deps/momo-momo-modl.Tpo ../.deps/momo-momo-modl.Po
3288:info:build mv -f ../.deps/momo-calculate_p_y.Tpo ../.deps/momo-calculate_p_y.Po
3289:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-seed_diffs.o -MD -MP -MF ../.deps/momo-seed_diffs.Tpo -c -o ../momo-seed_diffs.o `test -f '../seed_diffs.c' || echo './'`../seed_diffs.c
3290:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-seq2theta.o -MD -MP -MF ../.deps/momo-seq2theta.Tpo -c -o ../momo-seq2theta.o `test -f '../seq2theta.c' || echo './'`../seq2theta.c
3291:info:build mv -f ../.deps/momo-partition.Tpo ../.deps/momo-partition.Po
3292:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-sp_matrix.o -MD -MP -MF ../.deps/momo-sp_matrix.Tpo -c -o ../momo-sp_matrix.o `test -f '../sp_matrix.c' || echo './'`../sp_matrix.c
3293:info:build mv -f ../.deps/momo-dpalign.Tpo ../.deps/momo-dpalign.Po
3294:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-starts.o -MD -MP -MF ../.deps/momo-starts.Tpo -c -o ../momo-starts.o `test -f '../starts.c' || echo './'`../starts.c
3295:info:build mv -f ../.deps/momo-seed.Tpo ../.deps/momo-seed.Po
3296:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-subseq7.o -MD -MP -MF ../.deps/momo-subseq7.Tpo -c -o ../momo-subseq7.o `test -f '../subseq7.c' || echo './'`../subseq7.c
3297:info:build mv -f ../.deps/momo-discretize.Tpo ../.deps/momo-discretize.Po
3298:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-tcm.o -MD -MP -MF ../.deps/momo-tcm.Tpo -c -o ../momo-tcm.o `test -f '../tcm.c' || echo './'`../tcm.c
3299:info:build mv -f ../.deps/momo-llr.Tpo ../.deps/momo-llr.Po
3300:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-ushuffle.o -MD -MP -MF ../.deps/momo-ushuffle.Tpo -c -o ../momo-ushuffle.o `test -f '../ushuffle.c' || echo './'`../ushuffle.c
3301:info:build mv -f ../.deps/momo-prior.Tpo ../.deps/momo-prior.Po
3302:info:build /usr/bin/clang -DHAVE_CONFIG_H -I. -I../..   -I/opt/local/include -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3 -MT ../momo-verbosity.o -MD -MP -MF ../.deps/momo-verbosity.Tpo -c -o ../momo-verbosity.o `test -f '../verbosity.c' || echo './'`../verbosity.c
3303:info:build mv -f ../.deps/momo-seed_diffs.Tpo ../.deps/momo-seed_diffs.Po
3304:info:build mv -f ../.deps/momo-meme.Tpo ../.deps/momo-meme.Po
3305:info:build mv -f ../.deps/momo-verbosity.Tpo ../.deps/momo-verbosity.Po
3306:info:build mv -f ../.deps/momo-init.Tpo ../.deps/momo-init.Po
3307:info:build mv -f ../.deps/momo-meme_util.Tpo ../.deps/momo-meme_util.Po
3308:info:build mv -f ../.deps/momo-seq2theta.Tpo ../.deps/momo-seq2theta.Po
3309:info:build mv -f ../.deps/momo-oops.Tpo ../.deps/momo-oops.Po
3310:info:build mv -f ../.deps/meme-display.Tpo ../.deps/meme-display.Po
3311:info:build /bin/sh ../../libtool  --tag=CC   --mode=link /usr/bin/clang -I..  -I/opt/local/include/libxml2 -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o meme ../meme-banner.o ../meme-branching_search.o ../meme-calculate_p_y.o ../meme-discretize.o ../meme-display.o ../meme-dpalign.o ../meme-em.o ../meme-exec_parallel.o ../meme-fisher_exact.o ../meme-init.o ../meme-justlike.o ../meme-likelihood.o ../meme-llr.o ../meme-logs.o ../meme-meme.o ../meme-meme_util.o ../meme-message.o ../meme-mp.o ../meme-oops.o ../meme-partition.o ../meme-prior.o ../meme-psp.o ../meme-read_seq_file.o ../meme-seed.o ../meme-seed_diffs.o ../meme-seq2theta.o ../meme-sp_matrix.o ../meme-starts.o ../meme-subseq7.o ../meme-tcm.o ../meme-ushuffle.o ../meme-verbosity.o ../libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3312:info:build mv -f ../.deps/momo-ushuffle.Tpo ../.deps/momo-ushuffle.Po
3313:info:build mv -f ../.deps/momo-starts.Tpo ../.deps/momo-starts.Po
3314:info:build mv -f ../.deps/momo-read_seq_file.Tpo ../.deps/momo-read_seq_file.Po
3315:info:build mv -f ../.deps/momo-sp_matrix.Tpo ../.deps/momo-sp_matrix.Po
3316:info:build mv -f ../.deps/momo-tcm.Tpo ../.deps/momo-tcm.Po
3317:info:build mv -f ../.deps/momo-psp.Tpo ../.deps/momo-psp.Po
3318:info:build mv -f ../.deps/momo-subseq7.Tpo ../.deps/momo-subseq7.Po
3319:info:build mv -f ../.deps/momo-display.Tpo ../.deps/momo-display.Po
3320:info:build /bin/sh ../../libtool  --tag=CC   --mode=link /usr/bin/clang -I..  -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__   -O3  -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o momo ../momo-momo.o ../momo-momo-output.o ../momo-momo-algorithm.o ../momo-momo-simple.o ../momo-momo-motifx.o ../momo-momo-modl.o ../momo-momo-input.o ../momo-banner.o ../momo-branching_search.o ../momo-calculate_p_y.o ../momo-discretize.o ../momo-display.o ../momo-dpalign.o ../momo-em.o ../momo-exec_parallel.o ../momo-fisher_exact.o ../momo-init.o ../momo-justlike.o ../momo-likelihood.o ../momo-llr.o ../momo-logs.o ../momo-meme.o ../momo-meme_util.o ../momo-message.o ../momo-mp.o ../momo-oops.o ../momo-partition.o ../momo-prior.o ../momo-psp.o ../momo-read_seq_file.o ../momo-seed.o ../momo-seed_diffs.o ../momo-seq2theta.o ../momo-sp_matrix.o ../momo-starts.o ../momo-subseq7.o ../momo-tcm.o ../momo-ushuffle.o ../momo-verbosity.o ../libcommon.la -L/opt/local/lib -lxml2 -lz -llzma -lpthread -liconv -lm -lz
3321:info:build libtool: link: /usr/bin/clang -I.. -I/opt/local/include/libxml2 -DMPI_CMD= -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o meme ../meme-banner.o ../meme-branching_search.o ../meme-calculate_p_y.o ../meme-discretize.o ../meme-display.o ../meme-dpalign.o ../meme-em.o ../meme-exec_parallel.o ../meme-fisher_exact.o ../meme-init.o ../meme-justlike.o ../meme-likelihood.o ../meme-llr.o ../meme-logs.o ../meme-meme.o ../meme-meme_util.o ../meme-message.o ../meme-mp.o ../meme-oops.o ../meme-partition.o ../meme-prior.o ../meme-psp.o ../meme-read_seq_file.o ../meme-seed.o ../meme-seed_diffs.o ../meme-seq2theta.o ../meme-sp_matrix.o ../meme-starts.o ../meme-subseq7.o ../meme-tcm.o ../meme-ushuffle.o ../meme-verbosity.o  -L/opt/local/lib ../.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3322:info:build libtool: link: /usr/bin/clang -I.. -I/opt/local/include/libxml2 -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -Wl,-headerpad_max_install_names -arch x86_64 -o momo ../momo-momo.o ../momo-momo-output.o ../momo-momo-algorithm.o ../momo-momo-simple.o ../momo-momo-motifx.o ../momo-momo-modl.o ../momo-momo-input.o ../momo-banner.o ../momo-branching_search.o ../momo-calculate_p_y.o ../momo-discretize.o ../momo-display.o ../momo-dpalign.o ../momo-em.o ../momo-exec_parallel.o ../momo-fisher_exact.o ../momo-init.o ../momo-justlike.o ../momo-likelihood.o ../momo-llr.o ../momo-logs.o ../momo-meme.o ../momo-meme_util.o ../momo-message.o ../momo-mp.o ../momo-oops.o ../momo-partition.o ../momo-prior.o ../momo-psp.o ../momo-read_seq_file.o ../momo-seed.o ../momo-seed_diffs.o ../momo-seq2theta.o ../momo-sp_matrix.o ../momo-starts.o ../momo-subseq7.o ../momo-tcm.o ../momo-ushuffle.o ../momo-verbosity.o  -L/opt/local/lib ../.libs/libcommon.a -lxslt -lexslt -lxml2 -llzma -lpthread -liconv -lm -lz
3323:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src/parallel'
3324:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
3325:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/src'
3326:info:build Making all in scripts
3327:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/scripts'
3328:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' ama-qvalues.pl.in > ama-qvalues; \
3329:info:build   chmod +x ama-qvalues
3330:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' beeml2meme.pl.in > beeml2meme; \
3331:info:build   chmod +x beeml2meme
3332:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' dreme_xml_to_html.pl.in > dreme_xml_to_html; \
3333:info:build   chmod +x dreme_xml_to_html
3334:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' dreme_xml_to_txt.pl.in > dreme_xml_to_txt; \
3335:info:build   chmod +x dreme_xml_to_txt
3336:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' elm2meme.pl.in > elm2meme; \
3337:info:build   chmod +x elm2meme
3338:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-center.pl.in > fasta-center; \
3339:info:build   chmod +x fasta-center
3340:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-dinucleotide-shuffle.py.in > fasta-dinucleotide-shuffle; \
3341:info:build   chmod +x fasta-dinucleotide-shuffle
3342:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-fetch.pl.in > fasta-fetch; \
3343:info:build   chmod +x fasta-fetch
3344:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-hamming-enrich.py.in > fasta-hamming-enrich; \
3345:info:build   chmod +x fasta-hamming-enrich
3346:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-make-index.pl.in > fasta-make-index; \
3347:info:build   chmod +x fasta-make-index
3348:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-most.pl.in > fasta-most; \
3349:info:build   chmod +x fasta-most
3350:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-re-match.pl.in > fasta-re-match; \
3351:info:build   chmod +x fasta-re-match
3352:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-subsample.pl.in > fasta-subsample; \
3353:info:build   chmod +x fasta-subsample
3354:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' fasta-unique-names.pl.in > fasta-unique-names; \
3355:info:build   chmod +x fasta-unique-names
3356:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' glam2html.py.in > glam2html; \
3357:info:build   chmod +x glam2html
3358:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' glam2psfm.py.in > glam2psfm; \
3359:info:build   chmod +x glam2psfm
3360:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' glam2scan2html.py.in > glam2scan2html; \
3361:info:build   chmod +x glam2scan2html
3362:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' chen2meme.pl.in > chen2meme; \
3363:info:build   chmod +x chen2meme
3364:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' jaspar2meme.pl.in > jaspar2meme; \
3365:info:build   chmod +x jaspar2meme
3366:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' hart2meme-bkg.pl.in > hart2meme-bkg; \
3367:info:build   chmod +x hart2meme-bkg
3368:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' hartemink2psp.pl.in > hartemink2psp; \
3369:info:build   chmod +x hartemink2psp
3370:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' iupac2meme.pl.in > iupac2meme; \
3371:info:build   chmod +x iupac2meme
3372:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' mast_xml_to_html.pl.in > mast_xml_to_html; \
3373:info:build   chmod +x mast_xml_to_html
3374:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' mast_xml_to_txt.pl.in > mast_xml_to_txt; \
3375:info:build   chmod +x mast_xml_to_txt
3376:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' matrix2meme.pl.in > matrix2meme; \
3377:info:build   chmod +x matrix2meme
3378:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' meme-chip.pl.in > meme-chip; \
3379:info:build   chmod +x meme-chip
3380:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' meme-chip_html_to_tsv.pl.in > meme-chip_html_to_tsv; \
3381:info:build   chmod +x meme-chip_html_to_tsv
3382:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' meme-rename.pl.in > meme-rename; \
3383:info:build   chmod +x meme-rename
3384:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' meme_xml_to_html.pl.in > meme_xml_to_html; \
3385:info:build   chmod +x meme_xml_to_html
3386:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' nmica2meme.pl.in > nmica2meme; \
3387:info:build   chmod +x nmica2meme
3388:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' priority2meme.pl.in > priority2meme; \
3389:info:build   chmod +x priority2meme
3390:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' psp-gen.pl.in > psp-gen; \
3391:info:build   chmod +x psp-gen
3392:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' rsat-retrieve-seq.pl.in > rsat-retrieve-seq; \
3393:info:build   chmod +x rsat-retrieve-seq
3394:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' rsat-supported-organisms.pl.in > rsat-supported-organisms; \
3395:info:build   chmod +x rsat-supported-organisms
3396:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' rna2meme.pl.in > rna2meme; \
3397:info:build   chmod +x rna2meme
3398:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' scpd2meme.pl.in > scpd2meme; \
3399:info:build   chmod +x scpd2meme
3400:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' sites2meme.pl.in > sites2meme; \
3401:info:build   chmod +x sites2meme
3402:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' taipale2meme.pl.in > taipale2meme; \
3403:info:build   chmod +x taipale2meme
3404:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' tamo2meme.pl.in > tamo2meme; \
3405:info:build   chmod +x tamo2meme
3406:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' tomtom_xml_to_html.pl.in > tomtom_xml_to_html; \
3407:info:build   chmod +x tomtom_xml_to_html
3408:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' transfac2meme.pl.in > transfac2meme; \
3409:info:build   chmod +x transfac2meme
3410:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' uniprobe2meme.pl.in > uniprobe2meme; \
3411:info:build   chmod +x uniprobe2meme
3412:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' dreme.py.in > dreme; \
3413:info:build   chmod +x dreme
3414:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' Globals.pm.in > Globals.pm
3415:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' MemeWebUtils.pm.in > MemeWebUtils.pm
3416:info:build /usr/bin/sed -e 's%@ARCHIVE_REVISION@%7bc036d2e0d7b7cd63f6894d8593c1578ced0596%' -e 's%@ARCHIVE_DATE@%Thu Oct 12 13:33:47 2017 -0700%' -e 's%@ARCHIVE_VERSION@%4.12.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' -e 's%@WHICHPYTHON@%/opt/local/bin/python2.7%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%/opt/local/bin/gs%' -e 's%@PERLLIBDIR@%/opt/local/lib/perl%' -e 's%@PYTHONLIBDIR@%/opt/local/lib/python%' -e 's%@JAVALIBDIR@%/opt/local/lib/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/opt/local/share/meme-4.12.1%' -e 's%@BINDIR@%/opt/local/bin%' -e 's%@MEMELOGS@%/opt/local/var/meme-4.12.1/LOGS%' -e 's%@MEMEDB@%/opt/local/share/meme-4.12.1/db%' -e 's%@SITE_URL@%%' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/opt/local/share/meme-4.12.1/doc/%' StatusPage.pm.in > StatusPage.pm
3417:info:build cp fasta-dinucleotide-shuffle fasta-dinucleotide-shuffle.py
3418:info:build cp fasta-hamming-enrich fasta-hamming-enrich.py
3419:info:build echo fasta-dinucleotide-shuffle.py fasta-hamming-enrich.py
3420:info:build fasta-dinucleotide-shuffle.py fasta-hamming-enrich.py
3421:info:build echo alphabet.py hypergeometric.py sequence.py
3422:info:build alphabet.py hypergeometric.py sequence.py
3423:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/scripts'
3424:info:build Making all in tests
3425:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests'
3426:info:build Making all in ame
3427:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/ame'
3428:info:build make[3]: Nothing to be done for `all'.
3429:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/ame'
3430:info:build Making all in clustalw2fasta
3431:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/clustalw2fasta'
3432:info:build make[3]: Nothing to be done for `all'.
3433:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/clustalw2fasta'
3434:info:build Making all in centrimo
3435:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/centrimo'
3436:info:build make[3]: Nothing to be done for `all'.
3437:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/centrimo'
3438:info:build Making all in common
3439:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common'
3440:info:build Making all in motif.crp0
3441:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common/motif.crp0'
3442:info:build make[4]: Nothing to be done for `all'.
3443:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common/motif.crp0'
3444:info:build Making all in motif.Puf3p
3445:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common/motif.Puf3p'
3446:info:build make[4]: Nothing to be done for `all'.
3447:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common/motif.Puf3p'
3448:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common'
3449:info:build make[4]: Nothing to be done for `all-am'.
3450:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common'
3451:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/common'
3452:info:build Making all in create-priors
3453:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/create-priors'
3454:info:build make[3]: Nothing to be done for `all'.
3455:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/create-priors'
3456:info:build Making all in draw-mhmm
3457:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/draw-mhmm'
3458:info:build make[3]: Nothing to be done for `all'.
3459:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/draw-mhmm'
3460:info:build Making all in dreme
3461:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/dreme'
3462:info:build make[3]: Nothing to be done for `all'.
3463:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/dreme'
3464:info:build Making all in fasta-center
3465:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/fasta-center'
3466:info:build make[3]: Nothing to be done for `all'.
3467:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/fasta-center'
3468:info:build Making all in fimo
3469:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/fimo'
3470:info:build make[3]: Nothing to be done for `all'.
3471:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/fimo'
3472:info:build Making all in glam2
3473:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/glam2'
3474:info:build make[3]: Nothing to be done for `all'.
3475:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/glam2'
3476:info:build Making all in glam2scan
3477:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/glam2scan'
3478:info:build make[3]: Nothing to be done for `all'.
3479:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/glam2scan'
3480:info:build Making all in gomo
3481:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/gomo'
3482:info:build make[3]: Nothing to be done for `all'.
3483:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/gomo'
3484:info:build Making all in mast
3485:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mast'
3486:info:build make[3]: Nothing to be done for `all'.
3487:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mast'
3488:info:build Making all in mcast
3489:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mcast'
3490:info:build make[3]: Nothing to be done for `all'.
3491:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mcast'
3492:info:build Making all in meme
3493:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/meme'
3494:info:build make[3]: Nothing to be done for `all'.
3495:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/meme'
3496:info:build Making all in meme-chip
3497:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/meme-chip'
3498:info:build make[3]: Nothing to be done for `all'.
3499:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/meme-chip'
3500:info:build Making all in mhmm
3501:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmm'
3502:info:build make[3]: Nothing to be done for `all'.
3503:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmm'
3504:info:build Making all in mhmms
3505:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmms'
3506:info:build make[3]: Nothing to be done for `all'.
3507:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmms'
3508:info:build Making all in momo
3509:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/momo'
3510:info:build make[3]: Nothing to be done for `all'.
3511:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/momo'
3512:info:build Making all in mhmmscan
3513:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmmscan'
3514:info:build make[3]: Nothing to be done for `all'.
3515:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/mhmmscan'
3516:info:build Making all in motiph
3517:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/motiph'
3518:info:build make[3]: Nothing to be done for `all'.
3519:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/motiph'
3520:info:build Making all in psp-gen
3521:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/psp-gen'
3522:info:build make[3]: Nothing to be done for `all'.
3523:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/psp-gen'
3524:info:build Making all in qvalue
3525:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/qvalue'
3526:info:build make[3]: Nothing to be done for `all'.
3527:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/qvalue'
3528:info:build Making all in scaffold
3529:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/scaffold'
3530:info:build make[3]: Nothing to be done for `all'.
3531:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/scaffold'
3532:info:build Making all in spamo
3533:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/spamo'
3534:info:build make[3]: Nothing to be done for `all'.
3535:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/spamo'
3536:info:build Making all in tomtom
3537:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/tomtom'
3538:info:build make[3]: Nothing to be done for `all'.
3539:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/tomtom'
3540:info:build Making all in web
3541:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/web'
3542:info:build make[3]: Nothing to be done for `all'.
3543:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/web'
3544:info:build Making all in scripts
3545:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/scripts'
3546:info:build make[3]: Nothing to be done for `all'.
3547:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests/scripts'
3548:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests'
3549:info:build make[3]: Nothing to be done for `all-am'.
3550:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests'
3551:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/tests'
3552:info:build Making all in doc
3553:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3554:info:build /usr/bin/sed -e "/INSERT_COPYING_FILE/r ../COPYING" -e "/INSERT_COPYING_FILE/d" copyright.html.in > copyright.html
3555:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-recursive
3556:info:build make[3]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3557:info:build Making all in examples
3558:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples'
3559:info:build Making all in compute_prior_dist_example_output_files
3560:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples/compute_prior_dist_example_output_files'
3561:info:build make[5]: Nothing to be done for `all'.
3562:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples/compute_prior_dist_example_output_files'
3563:info:build Making all in sample_opal_scripts
3564:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples/sample_opal_scripts'
3565:info:build make[5]: Nothing to be done for `all'.
3566:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples/sample_opal_scripts'
3567:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples'
3568:info:build make[5]: Nothing to be done for `all-am'.
3569:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples'
3570:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/examples'
3571:info:build Making all in images
3572:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/images'
3573:info:build make[4]: Nothing to be done for `all'.
3574:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/images'
3575:info:build Making all in css
3576:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/css'
3577:info:build make[4]: Nothing to be done for `all'.
3578:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/css'
3579:info:build Making all in js
3580:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/js'
3581:info:build /usr/bin/sed -e 's%\@VERSION\@%4.12.1%g' -e 's%\@CONTACT\@%%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@URL\@%%g' -e 's%\@PREV_URL\@%%g' -e 's%\@PREV_VER\@%%g' -e 's%\@NOTICES_URL\@%./notices.txt%g' -e 's%\@NEWS_URL\@%./news.txt%g' menu-configure.js.in > menu-configure.js
3582:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-am
3583:info:build make[5]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/js'
3584:info:build make[5]: Nothing to be done for `all-am'.
3585:info:build make[5]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/js'
3586:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc/js'
3587:info:build make[4]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3588:info:build make[4]: Nothing to be done for `all-am'.
3589:info:build make[4]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3590:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3591:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/doc'
3592:info:build Making all in etc
3593:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/etc'
3594:info:build /usr/bin/sed -e 's%@SITE_URL@%%' -e 's%@AMIGO_URL@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' constants.js.in > constants.js
3595:info:build /usr/bin/sed -e 's%@SITE_URL@%%' -e 's%@AMIGO_URL@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' constants.xsl.in > constants.xsl
3596:info:build /opt/local/bin/perl5.24 ../etc/generate_xsl_icons.pl ../doc/images/gomo_icon.png > icons.xsl
3597:info:build /usr/bin/sed -e 's%@SITE_URL@%%' -e 's%@AMIGO_URL@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' logging.conf.in > logging.conf
3598:info:build /usr/bin/sed 's/tname/meme.css/' xsl-wrapper.in | /usr/bin/sed '5r meme.css' > meme.css.xsl
3599:info:build /opt/local/bin/perl5.24 ../etc/generate_js_wrapped_template.pl motif_logo_template template.eps > motif_logo_template.js
3600:info:build /usr/bin/sed 's/tname/utilities.js/' xsl-wrapper.in | /usr/bin/sed '5r utilities.js' > utilities.js.xsl
3601:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1/etc'
3602:info:build make[2]: Entering directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
3603:info:build make[2]: Nothing to be done for `all-am'.
3604:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
3605:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
3606:info:build make: Leaving directory `/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1'
3607:debug:build Privilege de-escalation not attempted as not running as root.
3608:debug:test test phase started at Thu Oct 12 17:43:29 PDT 2017
3609:notice:test --->  Testing memesuite
3610:debug:test Executing org.macports.test (memesuite)
3611:debug:test Environment:
3612:debug:test CC_PRINT_OPTIONS='YES'
3613:debug:test CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/.CC_PRINT_OPTIONS'
3614:debug:test CPATH='/opt/local/include'
3615:debug:test LIBRARY_PATH='/opt/local/lib'
3616:debug:test MACOSX_DEPLOYMENT_TARGET='10.13'
3617:info:test Executing:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && /usr/bin/make test
3618:debug:test system:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && /usr/bin/make test
3619:info:test cd tests/scripts; /Applications/Xcode.app/Contents/Developer/usr/bin/make check
3620:info:test /Applications/Xcode.app/Contents/Developer/usr/bin/make  test_driver
3621:info:test /usr/bin/sed -e 's%@WHICHPERL@%/opt/local/bin/perl5.24%' test_driver.pl.in > test_driver
3622:info:test chmod +x test_driver
3623:info:test /Applications/Xcode.app/Contents/Developer/usr/bin/make  check-TESTS
3624:info:test make[4]: Nothing to be done for `ama.log'.
3625:info:test make[4]: Nothing to be done for `ame.log'.
3626:info:test make[4]: Nothing to be done for `centrimo.log'.
3627:info:test make[4]: Nothing to be done for `create_priors.log'.
3628:info:test make[4]: Nothing to be done for `dreme.log'.
3629:info:test make[4]: Nothing to be done for `fasta-center.log'.
3630:info:test make[4]: Nothing to be done for `fasta-dinucleotide-shuffle.log'.
3631:info:test make[4]: Nothing to be done for `fimo.log'.
3632:info:test make[4]: Nothing to be done for `glam2.log'.
3633:info:test make[4]: Nothing to be done for `glam2scan.log'.
3634:info:test make[4]: Nothing to be done for `gomo.log'.
3635:info:test make[4]: Nothing to be done for `mast.log'.
3636:info:test make[4]: Nothing to be done for `mcast.log'.
3637:info:test make[4]: Nothing to be done for `meme.log'.
3638:info:test make[4]: Nothing to be done for `meme-chip.log'.
3639:info:test make[4]: Nothing to be done for `momo.log'.
3640:info:test make[4]: Nothing to be done for `motif-in.log'.
3641:info:test make[4]: Nothing to be done for `motiph.log'.
3642:info:test make[4]: Nothing to be done for `pspgen.log'.
3643:info:test make[4]: Nothing to be done for `qvalue.log'.
3644:info:test make[4]: Nothing to be done for `spamo.log'.
3645:info:test make[4]: Nothing to be done for `tomtom.log'.
3646:info:test fatal: making test-suite.log: failed to create ama.trs
3647:info:test fatal: making test-suite.log: failed to create ama.log
3648:info:test fatal: making test-suite.log: failed to create ame.trs
3649:info:test fatal: making test-suite.log: failed to create ame.log
3650:info:test fatal: making test-suite.log: failed to create centrimo.trs
3651:info:test fatal: making test-suite.log: failed to create centrimo.log
3652:info:test fatal: making test-suite.log: failed to create create_priors.trs
3653:info:test fatal: making test-suite.log: failed to create create_priors.log
3654:info:test fatal: making test-suite.log: failed to create dreme.trs
3655:info:test fatal: making test-suite.log: failed to create dreme.log
3656:info:test fatal: making test-suite.log: failed to create fasta-center.trs
3657:info:test fatal: making test-suite.log: failed to create fasta-center.log
3658:info:test fatal: making test-suite.log: failed to create fasta-dinucleotide-shuffle.trs
3659:info:test fatal: making test-suite.log: failed to create fasta-dinucleotide-shuffle.log
3660:info:test fatal: making test-suite.log: failed to create fimo.trs
3661:info:test fatal: making test-suite.log: failed to create fimo.log
3662:info:test fatal: making test-suite.log: failed to create glam2.trs
3663:info:test fatal: making test-suite.log: failed to create glam2.log
3664:info:test fatal: making test-suite.log: failed to create glam2scan.trs
3665:info:test fatal: making test-suite.log: failed to create glam2scan.log
3666:info:test fatal: making test-suite.log: failed to create gomo.trs
3667:info:test fatal: making test-suite.log: failed to create gomo.log
3668:info:test fatal: making test-suite.log: failed to create mast.trs
3669:info:test fatal: making test-suite.log: failed to create mast.log
3670:info:test fatal: making test-suite.log: failed to create mcast.trs
3671:info:test fatal: making test-suite.log: failed to create mcast.log
3672:info:test fatal: making test-suite.log: failed to create meme.trs
3673:info:test fatal: making test-suite.log: failed to create meme.log
3674:info:test fatal: making test-suite.log: failed to create meme-chip.trs
3675:info:test fatal: making test-suite.log: failed to create meme-chip.log
3676:info:test fatal: making test-suite.log: failed to create momo.trs
3677:info:test fatal: making test-suite.log: failed to create momo.log
3678:info:test fatal: making test-suite.log: failed to create motif-in.trs
3679:info:test fatal: making test-suite.log: failed to create motif-in.log
3680:info:test fatal: making test-suite.log: failed to create motiph.trs
3681:info:test fatal: making test-suite.log: failed to create motiph.log
3682:info:test fatal: making test-suite.log: failed to create pspgen.trs
3683:info:test fatal: making test-suite.log: failed to create pspgen.log
3684:info:test fatal: making test-suite.log: failed to create qvalue.trs
3685:info:test fatal: making test-suite.log: failed to create qvalue.log
3686:info:test fatal: making test-suite.log: failed to create spamo.trs
3687:info:test fatal: making test-suite.log: failed to create spamo.log
3688:info:test fatal: making test-suite.log: failed to create tomtom.trs
3689:info:test fatal: making test-suite.log: failed to create tomtom.log
3690:info:test make[3]: *** [test-suite.log] Error 1
3691:info:test make[2]: *** [check-TESTS] Error 2
3692:info:test make[1]: *** [check-am] Error 2
3693:info:test make: *** [test] Error 2
3694:info:test Command failed:  cd "/opt/local/var/macports/build/_Users_Shared_science_memesuite/memesuite/work/meme-4.12.1" && /usr/bin/make test
3695:info:test Exit code: 2
3696:error:test Failed to test memesuite: command execution failed
3697:debug:test Error code: CHILDSTATUS 50178 2
3698:debug:test Backtrace: command execution failed
3699:debug:test     while executing
3700:debug:test "system {*}$notty {*}$nice $fullcmdstring"
3701:debug:test     invoked from within
3702:debug:test "command_exec test"
3703:debug:test     (procedure "porttest::test_main" line 4)
3704:debug:test     invoked from within
3705:debug:test "$procedure $targetname"
3706:error:test See /opt/local/var/macports/logs/_Users_Shared_science_memesuite/memesuite/main.log for details.