Ticket #55540: main.log

File main.log, 9.8 KB (added by jantheron, 7 years ago)

cantera build logfile

Line 
1version:1
2:debug:main Executing org.macports.main (cantera-devel)
3:debug:main dropping privileges: euid changed to 503, egid changed to 501.
4:debug:archivefetch archivefetch phase started at Mon Dec 18 10:38:53 SAST 2017
5:debug:archivefetch Executing org.macports.archivefetch (cantera-devel)
6version:1
7:msg:archivefetch --->  Computing dependencies for cantera-devel:info:archivefetch .:debug:archivefetch Searching for dependency: scons
8:debug:archivefetch Found Dependency: receipt exists for scons
9:debug:archivefetch Searching for dependency: python27
10:debug:archivefetch Found Dependency: receipt exists for python27
11:debug:archivefetch Searching for dependency: py27-numpy
12:debug:archivefetch Found Dependency: receipt exists for py27-numpy
13:debug:archivefetch Searching for dependency: py27-cython
14:debug:archivefetch Found Dependency: receipt exists for py27-cython
15:debug:archivefetch Searching for dependency: sundials
16:debug:archivefetch Found Dependency: receipt exists for sundials
17:debug:main Executing org.macports.main (cantera-devel)
18:debug:main dropping privileges: euid changed to 503, egid changed to 501.
19:debug:fetch fetch phase started at Mon Dec 18 10:38:53 SAST 2017
20:notice:fetch --->  Fetching distfiles for cantera-devel
21:debug:fetch Executing org.macports.fetch (cantera-devel)
22:debug:fetch Privilege de-escalation not attempted as not running as root.
23:debug:checksum checksum phase started at Mon Dec 18 10:38:53 SAST 2017
24:notice:checksum --->  Verifying checksums for cantera-devel
25:debug:checksum Executing org.macports.checksum (cantera-devel)
26:info:checksum --->  Checksumming cantera-2.2.0b1.tar.gz
27:debug:checksum Calculated (rmd160) is dd1c69ed614942e7900bce4303ddee7b6216c5b6
28:debug:checksum Correct (rmd160) checksum for cantera-2.2.0b1.tar.gz
29:debug:checksum Calculated (sha256) is 25e6c3f2140bf8cc04c6559928dd4aa1bad0dc1a9cc437d3ea3f82ac1a54b393
30:debug:checksum Correct (sha256) checksum for cantera-2.2.0b1.tar.gz
31:debug:checksum Privilege de-escalation not attempted as not running as root.
32:debug:extract extract phase started at Mon Dec 18 10:38:53 SAST 2017
33:notice:extract --->  Extracting cantera-devel
34:debug:extract Executing org.macports.extract (cantera-devel)
35:info:extract --->  Extracting cantera-2.2.0b1.tar.gz
36:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/cantera/cantera-2.2.0b1.tar.gz'
37:debug:extract Environment:
38:debug:extract CC_PRINT_OPTIONS='YES'
39:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/.CC_PRINT_OPTIONS'
40:debug:extract CPATH='/opt/local/include'
41:debug:extract LIBRARY_PATH='/opt/local/lib'
42:debug:extract MACOSX_DEPLOYMENT_TARGET='10.11'
43:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cantera/cantera-2.2.0b1.tar.gz' | /usr/bin/tar -xf -
44:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cantera/cantera-2.2.0b1.tar.gz' | /usr/bin/tar -xf -
45:debug:extract euid/egid changed to: 0/0
46:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work to macports
47:debug:extract euid/egid changed to: 503/501
48:debug:extract Executing proc-post-org.macports.extract-extract-0
49:debug:extract Executing proc-post-org.macports.extract-extract-1
50:debug:extract Executing proc-post-org.macports.extract-extract-2
51:debug:extract Privilege de-escalation not attempted as not running as root.
52:debug:patch patch phase started at Mon Dec 18 10:38:54 SAST 2017
53:debug:patch Executing org.macports.patch (cantera-devel)
54:debug:patch Privilege de-escalation not attempted as not running as root.
55:debug:configure configure phase started at Mon Dec 18 10:38:54 SAST 2017
56:notice:configure --->  Configuring cantera-devel
57:debug:configure Preferred compilers: clang macports-clang-4.0 macports-clang-3.9 macports-clang-3.8 macports-clang-3.7 macports-clang-3.4 macports-llvm-gcc-4.2 apple-gcc-4.2
58:debug:configure Using compiler 'Xcode Clang'
59:debug:configure Executing org.macports.configure (cantera-devel)
60:debug:configure Privilege de-escalation not attempted as not running as root.
61:debug:build build phase started at Mon Dec 18 10:38:54 SAST 2017
62:notice:build --->  Building cantera-devel
63:debug:build Executing proc-pre-org.macports.build-build-0
64:debug:build Executing org.macports.build (cantera-devel)
65:debug:build Environment:
66:debug:build CC='/usr/bin/clang'
67:debug:build CC_PRINT_OPTIONS='YES'
68:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/.CC_PRINT_OPTIONS'
69:debug:build CFLAGS='-arch x86_64'
70:debug:build CPATH='/opt/local/include'
71:debug:build CXX='/usr/bin/clang++'
72:debug:build CXXFLAGS='-arch x86_64'
73:debug:build F90FLAGS='-m64'
74:debug:build FCFLAGS='-m64'
75:debug:build FFLAGS='-m64'
76:debug:build LDFLAGS='-arch x86_64'
77:debug:build LIBRARY_PATH='/opt/local/lib'
78:debug:build MACOSX_DEPLOYMENT_TARGET='10.11'
79:debug:build OBJC='/usr/bin/clang'
80:debug:build OBJCFLAGS='-arch x86_64'
81:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/cantera-2.2.0b1" && /opt/local/bin/scons install -j8 prefix=/opt/local CC=/usr/bin/clang CXX=/usr/bin/clang++ f90_interface=n python_prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 stage_dir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/destroot use_sundials=y sundials_include=/opt/local/include sundials_libdir=/opt/local/lib
82:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/cantera-2.2.0b1" && /opt/local/bin/scons install -j8 prefix=/opt/local CC=/usr/bin/clang CXX=/usr/bin/clang++ f90_interface=n python_prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 stage_dir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/destroot use_sundials=y sundials_include=/opt/local/include sundials_libdir=/opt/local/lib
83:info:build scons: Reading SConscript files ...
84:info:build INFO: SCons is using the following Python interpreter: /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
85:info:build Configuration variables read from 'cantera.conf' and command line:
86:info:build     CXX = '/usr/bin/clang++'
87:info:build     CC = '/usr/bin/clang'
88:info:build     prefix = '/opt/local'
89:info:build     python_prefix = '/opt/local/Library/Frameworks/Python.framework/Versions/2.7'
90:info:build     f90_interface = 'n'
91:info:build     use_sundials = 'y'
92:info:build     sundials_include = '/opt/local/include'
93:info:build     sundials_libdir = '/opt/local/lib'
94:info:build     stage_dir = '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/destroot'
95:info:build Checking for C++ header file cmath... yes
96:info:build Checking for C header file sys/times.h... yes
97:info:build Checking for C header file unistd.h... yes
98:info:build Checking for C header file fenv.h... yes
99:info:build Checking whether erf is declared... yes
100:info:build Checking for ::isnan(1.0)... yes
101:info:build Checking for std::isnan(1.0)... yes
102:info:build Checking for _isnan(1.0)... no
103:info:build Checking for C++ header file boost/math/special_functions/erf.hpp... yes
104:info:build Checking for std::shared_ptr<int> x... yes
105:info:build Checking for CVodeCreate(CV_BDF, CV_NEWTON) in C++ library sundials_cvodes... yes
106:info:build Checking for double x; log(x) in C library None... yes
107:info:build INFO: Using Sundials version SUNDIALS_PACKAGE_VERSION.
108:info:build Checking whether SUNDIALS_BLAS_LAPACK is declared... yes
109:info:build INFO: Found Cython version 0.27.3 for Python 2.x.
110:info:build INFO: Building the full Python package.
111:info:build WARNING: Couldn't find '3to2'. Python examples will not work correctly.
112:info:build INFO: Using Cython version 0.27.3 for Python 3.x.
113:info:build ERROR: Sundials version 'SUNDIALS_PACKAGE_VERSION' is not supported.
114:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/cantera-2.2.0b1" && /opt/local/bin/scons install -j8 prefix=/opt/local CC=/usr/bin/clang CXX=/usr/bin/clang++ f90_interface=n python_prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 stage_dir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/work/destroot use_sundials=y sundials_include=/opt/local/include sundials_libdir=/opt/local/lib
115:info:build Exit code: 1
116:error:build Failed to build cantera-devel: command execution failed
117:debug:build Error code: CHILDSTATUS 78203 1
118:debug:build Backtrace: command execution failed
119:debug:build     while executing
120:debug:build "system {*}$notty {*}$nice $fullcmdstring"
121:debug:build     invoked from within
122:debug:build "command_exec build"
123:debug:build     (procedure "portbuild::build_main" line 8)
124:debug:build     invoked from within
125:debug:build "$procedure $targetname"
126:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cantera/cantera-devel/main.log for details.