Ticket #57706: py36-petsc4py_gfortran_openmpi_main.log

File py36-petsc4py_gfortran_openmpi_main.log, 103.7 KB (added by jjstickel (Jonathan Stickel), 6 years ago)
Line 
1version:1
2:debug:sysinfo macOS 10.12 (darwin/16.7.0) arch i386
3:debug:sysinfo MacPorts 2.5.4
4:debug:sysinfo Xcode 9.0
5:debug:sysinfo SDK 10.12
6:debug:sysinfo MACOSX_DEPLOYMENT_TARGET: 10.12
7:debug:main epoch: in tree: 0 installed: 0
8:debug:main py36-setuptools 40.6.2_0 exists in the ports tree
9:debug:main py36-setuptools 40.6.2_0  is the latest installed
10:debug:main py36-setuptools 40.6.2_0  is active
11:debug:main Merging existing variants '' into variants
12:debug:main new fully merged portvariants:
13:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-setuptools
14:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
15:debug:main Re-registering default for build.cmd
16:debug:main Re-registering default for destroot.cmd
17:debug:main Re-registering default for destroot.destdir
18:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
19:debug:main only one arch supported, so not adding the default universal variant
20:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
21:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
22:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
23:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
24:debug:main Running callback portstartupitem::add_notes
25:debug:main Finished running callback portstartupitem::add_notes
26:debug:main No need to upgrade! py36-setuptools 40.6.2_0 >= py36-setuptools 40.6.2_0
27:debug:main epoch: in tree: 20170717 installed: 20170717
28:debug:main python36 3.6.7_0 exists in the ports tree
29:debug:main python36 3.6.7_0  is the latest installed
30:debug:main python36 3.6.7_0  is active
31:debug:main Merging existing variants '' into variants
32:debug:main new fully merged portvariants:
33:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/python36
34:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
35:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
36:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
37:debug:main universal variant already exists, so not adding the default one
38:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
39:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
40:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
41:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
42:debug:main Running callback portstartupitem::add_notes
43:debug:main Finished running callback portstartupitem::add_notes
44:debug:main No need to upgrade! python36 3.6.7_0 >= python36 3.6.7_0
45:debug:main epoch: in tree: 0 installed: 0
46:debug:main bzip2 1.0.6_0 exists in the ports tree
47:debug:main bzip2 1.0.6_0  is the latest installed
48:debug:main bzip2 1.0.6_0  is active
49:debug:main Merging existing variants '' into variants
50:debug:main new fully merged portvariants:
51:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/bzip2
52:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
53:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
54:debug:main universal variant already exists, so not adding the default one
55:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
56:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
57:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
58:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
59:debug:main Running callback portstartupitem::add_notes
60:debug:main Finished running callback portstartupitem::add_notes
61:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
62:debug:main epoch: in tree: 0 installed: 0
63:debug:main expat 2.2.6_1 exists in the ports tree
64:debug:main expat 2.2.6_1  is the latest installed
65:debug:main expat 2.2.6_1  is active
66:debug:main Merging existing variants '' into variants
67:debug:main new fully merged portvariants:
68:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/expat
69:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
70:debug:main adding the default universal variant
71:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
72:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
73:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
74:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
75:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
76:debug:main Running callback portstartupitem::add_notes
77:debug:main Finished running callback portstartupitem::add_notes
78:debug:main No need to upgrade! expat 2.2.6_1 >= expat 2.2.6_1
79:debug:main epoch: in tree: 2 installed: 2
80:debug:main gettext 0.19.8.1_0 exists in the ports tree
81:debug:main gettext 0.19.8.1_0  is the latest installed
82:debug:main gettext 0.19.8.1_0  is active
83:debug:main Merging existing variants '' into variants
84:debug:main new fully merged portvariants:
85:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gettext
86:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
87:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
88:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
89:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
90:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang < 211.10.1}
91:debug:main universal variant already exists, so not adding the default one
92:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
93:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
94:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
95:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
96:debug:main Running callback portstartupitem::add_notes
97:debug:main Finished running callback portstartupitem::add_notes
98:debug:main No need to upgrade! gettext 0.19.8.1_0 >= gettext 0.19.8.1_0
99:debug:main epoch: in tree: 0 installed: 0
100:debug:main libiconv 1.15_0 exists in the ports tree
101:debug:main libiconv 1.15_0  is the latest installed
102:debug:main libiconv 1.15_0  is active
103:debug:main Merging existing variants '' into variants
104:debug:main new fully merged portvariants:
105:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libiconv
106:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
107:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
108:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
109:debug:main universal variant already exists, so not adding the default one
110:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
111:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
112:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
113:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
114:debug:main Running callback portstartupitem::add_notes
115:debug:main Finished running callback portstartupitem::add_notes
116:debug:main No need to upgrade! libiconv 1.15_0 >= libiconv 1.15_0
117:debug:main epoch: in tree: 0 installed: 0
118:debug:main ncurses 6.1_0 exists in the ports tree
119:debug:main ncurses 6.1_0  is the latest installed
120:debug:main ncurses 6.1_0  is active
121:debug:main Merging existing variants '' into variants
122:debug:main new fully merged portvariants:
123:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ncurses
124:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
125:debug:main adding the default universal variant
126:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
127:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
128:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
129:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
130:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
131:debug:main Running callback portstartupitem::add_notes
132:debug:main Finished running callback portstartupitem::add_notes
133:debug:main No need to upgrade! ncurses 6.1_0 >= ncurses 6.1_0
134:debug:main epoch: in tree: 20090923 installed: 20090923
135:debug:main libedit 20180525-3.1_1 exists in the ports tree
136:debug:main libedit 20180525-3.1_1  is the latest installed
137:debug:main libedit 20180525-3.1_1  is active
138:debug:main Merging existing variants '' into variants
139:debug:main new fully merged portvariants:
140:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libedit
141:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
142:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
143:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
144:debug:main universal variant already exists, so not adding the default one
145:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
146:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
147:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
148:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
149:debug:main Running callback portstartupitem::add_notes
150:debug:main Finished running callback portstartupitem::add_notes
151:debug:main No need to upgrade! libedit 20180525-3.1_1 >= libedit 20180525-3.1_1
152:debug:main epoch: in tree: 0 installed: 0
153:debug:main libffi 3.2.1_0 exists in the ports tree
154:debug:main libffi 3.2.1_0  is the latest installed
155:debug:main libffi 3.2.1_0  is active
156:debug:main Merging existing variants '' into variants
157:debug:main new fully merged portvariants:
158:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libffi
159:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
160:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
161:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
162:debug:main universal variant already exists, so not adding the default one
163:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
164:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
165:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
166:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
167:debug:main Running callback portstartupitem::add_notes
168:debug:main Finished running callback portstartupitem::add_notes
169:debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0
170:debug:main epoch: in tree: 1 installed: 1
171:debug:main openssl 1.0.2q_0 exists in the ports tree
172:debug:main openssl 1.0.2q_0  is the latest installed
173:debug:main openssl 1.0.2q_0  is active
174:debug:main Merging existing variants '' into variants
175:debug:main new fully merged portvariants:
176:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/openssl
177:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
178:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
179:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
180:debug:main universal variant already exists, so not adding the default one
181:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
182:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
183:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
184:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
185:debug:main Running callback portstartupitem::add_notes
186:debug:main Finished running callback portstartupitem::add_notes
187:debug:main No need to upgrade! openssl 1.0.2q_0 >= openssl 1.0.2q_0
188:debug:main epoch: in tree: 0 installed: 0
189:debug:main zlib 1.2.11_0 exists in the ports tree
190:debug:main zlib 1.2.11_0  is the latest installed
191:debug:main zlib 1.2.11_0  is active
192:debug:main Merging existing variants '' into variants
193:debug:main new fully merged portvariants:
194:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/zlib
195:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
196:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
197:debug:main adding the default universal variant
198:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
199:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
200:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
201:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
202:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
203:debug:main Running callback portstartupitem::add_notes
204:debug:main Finished running callback portstartupitem::add_notes
205:debug:main No need to upgrade! zlib 1.2.11_0 >= zlib 1.2.11_0
206:debug:main epoch: in tree: 0 installed: 0
207:debug:main sqlite3 3.25.3_0 exists in the ports tree
208:debug:main sqlite3 3.25.3_0  is the latest installed
209:debug:main sqlite3 3.25.3_0  is active
210:debug:main Merging existing variants '' into variants
211:debug:main new fully merged portvariants:
212:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/databases/sqlite3
213:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
214:debug:main adding the default universal variant
215:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
216:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
217:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
218:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
219:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
220:debug:main Running callback portstartupitem::add_notes
221:debug:main Finished running callback portstartupitem::add_notes
222:debug:main No need to upgrade! sqlite3 3.25.3_0 >= sqlite3 3.25.3_0
223:debug:main epoch: in tree: 0 installed: 0
224:debug:main xz 5.2.4_0 exists in the ports tree
225:debug:main xz 5.2.4_0  is the latest installed
226:debug:main xz 5.2.4_0  is active
227:debug:main Merging existing variants '' into variants
228:debug:main new fully merged portvariants:
229:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/xz
230:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
231:debug:main adding the default universal variant
232:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
233:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
234:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
235:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
236:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
237:debug:main Running callback portstartupitem::add_notes
238:debug:main Finished running callback portstartupitem::add_notes
239:debug:main No need to upgrade! xz 5.2.4_0 >= xz 5.2.4_0
240:debug:main epoch: in tree: 0 installed: 0
241:debug:main python_select 0.3_8 exists in the ports tree
242:debug:main python_select 0.3_8  is the latest installed
243:debug:main python_select 0.3_8  is active
244:debug:main Merging existing variants '' into variants
245:debug:main new fully merged portvariants:
246:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/python_select
247:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
248:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
249:debug:main universal_variant is false, so not adding the default universal variant
250:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
251:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
252:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
253:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
254:debug:main Running callback portstartupitem::add_notes
255:debug:main Finished running callback portstartupitem::add_notes
256:debug:main No need to upgrade! python_select 0.3_8 >= python_select 0.3_8
257:debug:main epoch: in tree: 0 installed: 0
258:debug:main python3_select 0.0_1 exists in the ports tree
259:debug:main python3_select 0.0_1  is the latest installed
260:debug:main python3_select 0.0_1  is active
261:debug:main Merging existing variants '' into variants
262:debug:main new fully merged portvariants:
263:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/python3_select
264:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
265:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
266:debug:main universal_variant is false, so not adding the default universal variant
267:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
268:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
269:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
270:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
271:debug:main Running callback portstartupitem::add_notes
272:debug:main Finished running callback portstartupitem::add_notes
273:debug:main No need to upgrade! python3_select 0.0_1 >= python3_select 0.0_1
274:debug:main epoch: in tree: 0 installed: 0
275:debug:main py36-cython 0.29.1_0 exists in the ports tree
276:debug:main py36-cython 0.29.1_0  is the latest installed
277:debug:main py36-cython 0.29.1_0  is active
278:debug:main Merging existing variants '' into variants
279:debug:main new fully merged portvariants:
280:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-cython
281:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
282:debug:main Re-registering default for build.cmd
283:debug:main Re-registering default for destroot.cmd
284:debug:main Re-registering default for destroot.destdir
285:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
286:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
287:debug:main adding the default universal variant
288:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
289:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
290:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
291:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
292:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
293:debug:main Running callback portstartupitem::add_notes
294:debug:main Finished running callback portstartupitem::add_notes
295:debug:main No need to upgrade! py36-cython 0.29.1_0 >= py36-cython 0.29.1_0
296:debug:main epoch: in tree: 0 installed: 0
297:debug:main cython_select 0.1_0 exists in the ports tree
298:debug:main cython_select 0.1_0  is the latest installed
299:debug:main cython_select 0.1_0  is active
300:debug:main Merging existing variants '' into variants
301:debug:main new fully merged portvariants:
302:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/cython_select
303:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
304:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
305:debug:main universal_variant is false, so not adding the default universal variant
306:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
307:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
308:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
309:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
310:debug:main Running callback portstartupitem::add_notes
311:debug:main Finished running callback portstartupitem::add_notes
312:debug:main No need to upgrade! cython_select 0.1_0 >= cython_select 0.1_0
313:debug:main epoch: in tree: 2 installed: 2
314:debug:main gcc8 8.2.0_3 exists in the ports tree
315:debug:main gcc8 8.2.0_3  is the latest installed
316:debug:main gcc8 8.2.0_3  is active
317:debug:main Merging existing variants '' into variants
318:debug:main new fully merged portvariants:
319:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc8
320:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
321:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
322:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
323:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
324:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang < 300}
325:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
326:debug:main universal variant already exists, so not adding the default one
327:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
328:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
329:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
330:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
331:debug:main Running callback portstartupitem::add_notes
332:debug:main Finished running callback portstartupitem::add_notes
333:debug:main No need to upgrade! gcc8 8.2.0_3 >= gcc8 8.2.0_3
334:debug:main epoch: in tree: 0 installed: 0
335:debug:main cctools 921_0 exists in the ports tree
336:debug:main cctools 921_0 +xcode is the latest installed
337:debug:main cctools 921_0 +xcode is active
338:debug:main Merging existing variants '+xcode-llvm40' into variants
339:debug:main new fully merged portvariants: llvm40 - xcode +
340:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/cctools
341:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
342:debug:main universal_variant is false, so not adding the default universal variant
343:debug:main Executing variant xcode provides xcode
344:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
345:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
346:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
347:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
348:debug:main Running callback portstartupitem::add_notes
349:debug:main Finished running callback portstartupitem::add_notes
350:debug:main No need to upgrade! cctools 921_0 >= cctools 921_0
351:debug:main epoch: in tree: 0 installed: 0
352:debug:main gmp 6.1.2_1 exists in the ports tree
353:debug:main gmp 6.1.2_1  is the latest installed
354:debug:main gmp 6.1.2_1  is active
355:debug:main Merging existing variants '' into variants
356:debug:main new fully merged portvariants:
357:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gmp
358:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
359:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
360:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
361:debug:main universal variant already exists, so not adding the default one
362:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
363:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
364:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
365:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
366:debug:main Running callback portstartupitem::add_notes
367:debug:main Finished running callback portstartupitem::add_notes
368:debug:main No need to upgrade! gmp 6.1.2_1 >= gmp 6.1.2_1
369:debug:main epoch: in tree: 2 installed: 2
370:debug:main isl 0.20_0 exists in the ports tree
371:debug:main isl 0.20_0  is the latest installed
372:debug:main isl 0.20_0  is active
373:debug:main Merging existing variants '' into variants
374:debug:main new fully merged portvariants:
375:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/isl
376:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
377:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
378:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
379:debug:main universal variant already exists, so not adding the default one
380:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
381:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
382:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
383:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
384:debug:main Running callback portstartupitem::add_notes
385:debug:main Finished running callback portstartupitem::add_notes
386:debug:main No need to upgrade! isl 0.20_0 >= isl 0.20_0
387:debug:main epoch: in tree: 2 installed: 2
388:debug:main ld64 3_1 exists in the ports tree
389:debug:main ld64 3_1 +ld64_xcode is the latest installed
390:debug:main ld64 3_1 +ld64_xcode is active
391:debug:main Merging existing variants '+ld64_xcode' into variants
392:debug:main new fully merged portvariants: ld64_xcode +
393:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64
394:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
395:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
396:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
397:debug:main universal variant already exists, so not adding the default one
398:debug:main Executing variant ld64_xcode provides ld64_xcode
399:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
400:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
401:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
402:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
403:debug:main Running callback portstartupitem::add_notes
404:debug:main Finished running callback portstartupitem::add_notes
405:debug:main No need to upgrade! ld64 3_1 >= ld64 3_1
406:debug:main epoch: in tree: 2 installed: 2
407:debug:main ld64-xcode 2_1 exists in the ports tree
408:debug:main ld64-xcode 2_1  is the latest installed
409:debug:main ld64-xcode 2_1  is active
410:debug:main Merging existing variants '' into variants
411:debug:main new fully merged portvariants:
412:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64
413:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
414:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
415:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
416:debug:main universal variant already exists, so not adding the default one
417:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
418:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
419:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
420:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
421:debug:main Running callback portstartupitem::add_notes
422:debug:main Finished running callback portstartupitem::add_notes
423:debug:main No need to upgrade! ld64-xcode 2_1 >= ld64-xcode 2_1
424:debug:main epoch: in tree: 0 installed: 0
425:debug:main libmpc 1.1.0_1 exists in the ports tree
426:debug:main libmpc 1.1.0_1  is the latest installed
427:debug:main libmpc 1.1.0_1  is active
428:debug:main Merging existing variants '' into variants
429:debug:main new fully merged portvariants:
430:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libmpc
431:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
432:debug:main adding the default universal variant
433:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
434:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
435:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
436:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
437:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
438:debug:main Running callback portstartupitem::add_notes
439:debug:main Finished running callback portstartupitem::add_notes
440:debug:main No need to upgrade! libmpc 1.1.0_1 >= libmpc 1.1.0_1
441:debug:main epoch: in tree: 0 installed: 0
442:debug:main mpfr 4.0.1_0 exists in the ports tree
443:debug:main mpfr 4.0.1_0  is the latest installed
444:debug:main mpfr 4.0.1_0  is active
445:debug:main Merging existing variants '' into variants
446:debug:main new fully merged portvariants:
447:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/mpfr
448:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
449:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
450:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
451:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
452:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang == 211.10.1}
453:debug:main universal variant already exists, so not adding the default one
454:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
455:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
456:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
457:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
458:debug:main Running callback portstartupitem::add_notes
459:debug:main Finished running callback portstartupitem::add_notes
460:debug:main No need to upgrade! mpfr 4.0.1_0 >= mpfr 4.0.1_0
461:debug:main epoch: in tree: 0 installed: 0
462:debug:main gcc_select 0.1_8 exists in the ports tree
463:debug:main gcc_select 0.1_8  is the latest installed
464:debug:main gcc_select 0.1_8  is active
465:debug:main Merging existing variants '' into variants
466:debug:main new fully merged portvariants:
467:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/gcc_select
468:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
469:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
470:debug:main universal_variant is false, so not adding the default universal variant
471:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
472:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
473:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
474:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
475:debug:main Running callback portstartupitem::add_notes
476:debug:main Finished running callback portstartupitem::add_notes
477:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
478:debug:main epoch: in tree: 3 installed: 3
479:debug:main libgcc 1.0_0 exists in the ports tree
480:debug:main libgcc 1.0_0  is the latest installed
481:debug:main libgcc 1.0_0  is active
482:debug:main Merging existing variants '' into variants
483:debug:main new fully merged portvariants:
484:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/libgcc
485:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
486:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
487:debug:main universal_variant is false, so not adding the default universal variant
488:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
489:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
490:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
491:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
492:debug:main Running callback portstartupitem::add_notes
493:debug:main Finished running callback portstartupitem::add_notes
494:debug:main No need to upgrade! libgcc 1.0_0 >= libgcc 1.0_0
495:debug:main epoch: in tree: 2 installed: 2
496:debug:main libgcc8 8.2.0_2 exists in the ports tree
497:debug:main libgcc8 8.2.0_2  is the latest installed
498:debug:main libgcc8 8.2.0_2  is active
499:debug:main Merging existing variants '' into variants
500:debug:main new fully merged portvariants:
501:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc8
502:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
503:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
504:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
505:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
506:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang < 300}
507:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
508:debug:main universal variant already exists, so not adding the default one
509:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
510:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
511:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
512:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
513:debug:main Running callback portstartupitem::add_notes
514:debug:main Finished running callback portstartupitem::add_notes
515:debug:main No need to upgrade! libgcc8 8.2.0_2 >= libgcc8 8.2.0_2
516:debug:main epoch: in tree: 0 installed: 0
517:debug:main petsc 3.9.3_0 exists in the ports tree
518:debug:main petsc 3.9.3_0 +gfortran+hwloc+openblas+openmpi+suitesparse+sundials is the latest installed
519:debug:main petsc 3.9.3_0 +gfortran+hwloc+openblas+openmpi+suitesparse+sundials is active
520:debug:main Merging existing variants '+gfortran+hwloc+openblas+openmpi+suitesparse+sundials-accelerate-mpich' into variants
521:debug:main new fully merged portvariants: suitesparse + openmpi + openblas + mpich - accelerate - hwloc + sundials + gfortran +
522:debug:main Changing to port directory: /Users/Shared/install/macports/ports/math/petsc
523:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
524:debug:main Sourcing PortGroup bitbucket 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/bitbucket-1.0.tcl
525:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
526:debug:main Sourcing PortGroup linear_algebra 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/linear_algebra-1.0.tcl
527:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
528:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
529:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
530:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
531:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
532:debug:main Re-registering default for distname
533:debug:main Re-registering default for livecheck.type
534:debug:main Re-registering default for livecheck.url
535:debug:main Re-registering default for livecheck.regex
536:debug:main Re-registering default for livecheck.version
537:debug:main universal variant already exists, so not adding the default one
538:debug:main Executing variant openblas provides openblas
539:debug:main Executing variant gfortran provides gfortran
540:debug:main Executing variant openmpi provides openmpi
541:debug:main Executing variant hwloc provides hwloc
542:debug:main Executing variant suitesparse provides suitesparse
543:debug:main Executing variant sundials provides sundials
544:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
545:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
546:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
547:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
548:debug:main Running callback portstartupitem::add_notes
549:debug:main Finished running callback portstartupitem::add_notes
550:debug:main No need to upgrade! petsc 3.9.3_0 >= petsc 3.9.3_0
551:debug:main epoch: in tree: 0 installed: 0
552:debug:main OpenBLAS 0.3.3_0 exists in the ports tree
553:debug:main OpenBLAS 0.3.3_0 +clang+gcc8+lapack is the latest installed
554:debug:main OpenBLAS 0.3.3_0 +clang+gcc8+lapack is active
555:debug:main Merging existing variants '+clang+gcc8+lapack' into variants
556:debug:main new fully merged portvariants: lapack + gcc8 + clang +
557:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/OpenBLAS
558:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
559:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
560:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
561:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
562:debug:main Re-registering default for livecheck.regex
563:debug:main universal variant already exists, so not adding the default one
564:debug:main Executing variant clang provides clang
565:debug:main Executing variant gcc8 provides gcc8
566:debug:main Executing variant lapack provides lapack
567:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
568:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
569:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
570:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
571:debug:main Running callback portstartupitem::add_notes
572:debug:main Finished running callback portstartupitem::add_notes
573:debug:main No need to upgrade! OpenBLAS 0.3.3_0 >= OpenBLAS 0.3.3_0
574:debug:main epoch: in tree: 0 installed: 0
575:debug:main openmpi-default 3.0.0_0 exists in the ports tree
576:debug:main openmpi-default 3.0.0_0 +gcc8 is the latest installed
577:debug:main openmpi-default 3.0.0_0 +gcc8 is active
578:debug:main Merging existing variants '+gcc8' into variants
579:debug:main new fully merged portvariants: gcc8 +
580:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/openmpi
581:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
582:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
583:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
584:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
585:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
586:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
587:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
588:debug:main Unmatched blacklisted compiler: gcc-4.0
589:debug:main Unmatched blacklisted compiler: llvm-gcc-4.2
590:debug:main Unmatched blacklisted compiler: macports-llvm-gcc-4.2
591:debug:main universal variant already exists, so not adding the default one
592:debug:main Executing variant gcc8 provides gcc8
593:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
594:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
595:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
596:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
597:debug:main Running callback portstartupitem::add_notes
598:debug:main Finished running callback portstartupitem::add_notes
599:debug:main No need to upgrade! openmpi-default 3.0.0_0 >= openmpi-default 3.0.0_0
600:debug:main epoch: in tree: 1 installed: 1
601:debug:main hwloc 1.11.8_0 exists in the ports tree
602:debug:main hwloc 1.11.8_0  is the latest installed
603:debug:main hwloc 1.11.8_0  is active
604:debug:main Merging existing variants '' into variants
605:debug:main new fully merged portvariants:
606:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/hwloc
607:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
608:debug:main adding the default universal variant
609:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
610:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
611:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
612:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
613:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
614:debug:main Running callback portstartupitem::add_notes
615:debug:main Finished running callback portstartupitem::add_notes
616:debug:main No need to upgrade! hwloc 1.11.8_0 >= hwloc 1.11.8_0
617:debug:main epoch: in tree: 0 installed: 0
618:debug:main mpi_select 0.0_3 exists in the ports tree
619:debug:main mpi_select 0.0_3  is the latest installed
620:debug:main mpi_select 0.0_3  is active
621:debug:main Merging existing variants '' into variants
622:debug:main new fully merged portvariants:
623:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/mpi_select
624:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
625:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
626:debug:main universal_variant is false, so not adding the default universal variant
627:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
628:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
629:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
630:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
631:debug:main Running callback portstartupitem::add_notes
632:debug:main Finished running callback portstartupitem::add_notes
633:debug:main No need to upgrade! mpi_select 0.0_3 >= mpi_select 0.0_3
634:debug:main epoch: in tree: 0 installed: 0
635:debug:main mpi-doc 3.2_0 exists in the ports tree
636:debug:main mpi-doc 3.2_0  is the latest installed
637:debug:main mpi-doc 3.2_0  is active
638:debug:main Merging existing variants '' into variants
639:debug:main new fully merged portvariants:
640:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/mpi-doc
641:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
642:debug:main universal_variant is false, so not adding the default universal variant
643:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
644:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
645:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
646:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
647:debug:main Running callback portstartupitem::add_notes
648:debug:main Finished running callback portstartupitem::add_notes
649:debug:main No need to upgrade! mpi-doc 3.2_0 >= mpi-doc 3.2_0
650:debug:main epoch: in tree: 20181026 installed: 20181026
651:debug:main SuiteSparse_AMD 2.4.6_0 exists in the ports tree
652:debug:main SuiteSparse_AMD 2.4.6_0  is the latest installed
653:debug:main SuiteSparse_AMD 2.4.6_0  is active
654:debug:main Merging existing variants '' into variants
655:debug:main new fully merged portvariants:
656:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
657:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
658:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
659:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
660:debug:main adding the default universal variant
661:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
662:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
663:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
664:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
665:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
666:debug:main Running callback portstartupitem::add_notes
667:debug:main Finished running callback portstartupitem::add_notes
668:debug:main No need to upgrade! SuiteSparse_AMD 2.4.6_0 >= SuiteSparse_AMD 2.4.6_0
669:debug:main epoch: in tree: 20181026 installed: 20181026
670:debug:main SuiteSparse_config 5.3.0_0 exists in the ports tree
671:debug:main SuiteSparse_config 5.3.0_0  is the latest installed
672:debug:main SuiteSparse_config 5.3.0_0  is active
673:debug:main Merging existing variants '' into variants
674:debug:main new fully merged portvariants:
675:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
676:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
677:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
678:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
679:debug:main adding the default universal variant
680:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
681:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
682:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
683:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
684:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
685:debug:main Running callback portstartupitem::add_notes
686:debug:main Finished running callback portstartupitem::add_notes
687:debug:main No need to upgrade! SuiteSparse_config 5.3.0_0 >= SuiteSparse_config 5.3.0_0
688:debug:main epoch: in tree: 20181026 installed: 20181026
689:debug:main SuiteSparse_BTF 1.2.6_0 exists in the ports tree
690:debug:main SuiteSparse_BTF 1.2.6_0  is the latest installed
691:debug:main SuiteSparse_BTF 1.2.6_0  is active
692:debug:main Merging existing variants '' into variants
693:debug:main new fully merged portvariants:
694:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
695:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
696:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
697:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
698:debug:main adding the default universal variant
699:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
700:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
701:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
702:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
703:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
704:debug:main Running callback portstartupitem::add_notes
705:debug:main Finished running callback portstartupitem::add_notes
706:debug:main No need to upgrade! SuiteSparse_BTF 1.2.6_0 >= SuiteSparse_BTF 1.2.6_0
707:debug:main epoch: in tree: 20181026 installed: 20181026
708:debug:main SuiteSparse_CAMD 2.4.6_0 exists in the ports tree
709:debug:main SuiteSparse_CAMD 2.4.6_0  is the latest installed
710:debug:main SuiteSparse_CAMD 2.4.6_0  is active
711:debug:main Merging existing variants '' into variants
712:debug:main new fully merged portvariants:
713:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
714:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
715:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
716:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
717:debug:main adding the default universal variant
718:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
719:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
720:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
721:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
722:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
723:debug:main Running callback portstartupitem::add_notes
724:debug:main Finished running callback portstartupitem::add_notes
725:debug:main No need to upgrade! SuiteSparse_CAMD 2.4.6_0 >= SuiteSparse_CAMD 2.4.6_0
726:debug:main epoch: in tree: 20181026 installed: 20181026
727:debug:main SuiteSparse_CCOLAMD 2.9.6_0 exists in the ports tree
728:debug:main SuiteSparse_CCOLAMD 2.9.6_0  is the latest installed
729:debug:main SuiteSparse_CCOLAMD 2.9.6_0  is active
730:debug:main Merging existing variants '' into variants
731:debug:main new fully merged portvariants:
732:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
733:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
734:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
735:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
736:debug:main adding the default universal variant
737:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
738:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
739:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
740:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
741:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
742:debug:main Running callback portstartupitem::add_notes
743:debug:main Finished running callback portstartupitem::add_notes
744:debug:main No need to upgrade! SuiteSparse_CCOLAMD 2.9.6_0 >= SuiteSparse_CCOLAMD 2.9.6_0
745:debug:main epoch: in tree: 20181026 installed: 20181026
746:debug:main SuiteSparse_CHOLMOD 3.0.12_0 exists in the ports tree
747:debug:main SuiteSparse_CHOLMOD 3.0.12_0 +accelerate is the latest installed
748:debug:main SuiteSparse_CHOLMOD 3.0.12_0 +accelerate is active
749:debug:main Merging existing variants '+accelerate' into variants
750:debug:main new fully merged portvariants: accelerate +
751:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
752:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
753:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
754:debug:main Sourcing PortGroup linear_algebra 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/linear_algebra-1.0.tcl
755:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
756:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
757:debug:main adding the default universal variant
758:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
759:debug:main Executing variant accelerate provides accelerate
760:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
761:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
762:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
763:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
764:debug:main Running callback portstartupitem::add_notes
765:debug:main Finished running callback portstartupitem::add_notes
766:debug:main No need to upgrade! SuiteSparse_CHOLMOD 3.0.12_0 >= SuiteSparse_CHOLMOD 3.0.12_0
767:debug:main epoch: in tree: 20181026 installed: 20181026
768:debug:main SuiteSparse_COLAMD 2.9.6_0 exists in the ports tree
769:debug:main SuiteSparse_COLAMD 2.9.6_0  is the latest installed
770:debug:main SuiteSparse_COLAMD 2.9.6_0  is active
771:debug:main Merging existing variants '' into variants
772:debug:main new fully merged portvariants:
773:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
774:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
775:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
776:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
777:debug:main adding the default universal variant
778:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
779:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
780:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
781:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
782:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
783:debug:main Running callback portstartupitem::add_notes
784:debug:main Finished running callback portstartupitem::add_notes
785:debug:main No need to upgrade! SuiteSparse_COLAMD 2.9.6_0 >= SuiteSparse_COLAMD 2.9.6_0
786:debug:main epoch: in tree: 0 installed: 0
787:debug:main metis 5.1.0_3 exists in the ports tree
788:debug:main metis 5.1.0_3  is the latest installed
789:debug:main metis 5.1.0_3  is active
790:debug:main Merging existing variants '' into variants
791:debug:main new fully merged portvariants:
792:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/metis
793:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
794:debug:main Re-registering default for configure.dir
795:debug:main Re-registering default for configure.pre_args
796:debug:main Re-registering default for build.dir
797:debug:main Re-registering default for destroot.target
798:debug:main Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl
799:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
800:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
801:debug:main adding the default universal variant
802:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
803:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
804:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
805:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
806:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
807:debug:main Running callback portstartupitem::add_notes
808:debug:main Finished running callback portstartupitem::add_notes
809:debug:main No need to upgrade! metis 5.1.0_3 >= metis 5.1.0_3
810:debug:main epoch: in tree: 20181026 installed: 20181026
811:debug:main SuiteSparse_KLU 1.3.8_0 exists in the ports tree
812:debug:main SuiteSparse_KLU 1.3.8_0  is the latest installed
813:debug:main SuiteSparse_KLU 1.3.8_0  is active
814:debug:main Merging existing variants '' into variants
815:debug:main new fully merged portvariants:
816:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
817:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
818:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
819:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
820:debug:main adding the default universal variant
821:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
822:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
823:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
824:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
825:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
826:debug:main Running callback portstartupitem::add_notes
827:debug:main Finished running callback portstartupitem::add_notes
828:debug:main No need to upgrade! SuiteSparse_KLU 1.3.8_0 >= SuiteSparse_KLU 1.3.8_0
829:debug:main epoch: in tree: 20181026 installed: 20181026
830:debug:main SuiteSparse_UMFPACK 5.7.7_0 exists in the ports tree
831:debug:main SuiteSparse_UMFPACK 5.7.7_0 +accelerate is the latest installed
832:debug:main SuiteSparse_UMFPACK 5.7.7_0 +accelerate is active
833:debug:main Merging existing variants '+accelerate' into variants
834:debug:main new fully merged portvariants: accelerate +
835:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/SuiteSparse
836:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
837:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
838:debug:main Sourcing PortGroup linear_algebra 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/linear_algebra-1.0.tcl
839:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
840:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
841:debug:main adding the default universal variant
842:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
843:debug:main Executing variant accelerate provides accelerate
844:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
845:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
846:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
847:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
848:debug:main Running callback portstartupitem::add_notes
849:debug:main Finished running callback portstartupitem::add_notes
850:debug:main No need to upgrade! SuiteSparse_UMFPACK 5.7.7_0 >= SuiteSparse_UMFPACK 5.7.7_0
851:debug:main epoch: in tree: 0 installed: 0
852:debug:main sundials2 2.7.0_3 exists in the ports tree
853:debug:main sundials2 2.7.0_3 +gfortran+openblas+openmpi is the latest installed
854:debug:main sundials2 2.7.0_3 +gfortran+openblas+openmpi is active
855:debug:main Merging existing variants '+gfortran+openblas+openmpi-accelerate-mpich' into variants
856:debug:main new fully merged portvariants: openmpi + openblas + mpich - accelerate - gfortran +
857:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/sundials2
858:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
859:debug:main Re-registering default for destroot.target
860:debug:main Re-registering default for configure.dir
861:debug:main Re-registering default for build.dir
862:debug:main Re-registering default for configure.pre_args
863:debug:main Sourcing PortGroup cmake 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.1.tcl
864:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
865:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
866:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
867:debug:main adding the default universal variant
868:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
869:debug:main Executing variant gfortran provides gfortran
870:debug:main Executing variant openmpi provides openmpi
871:debug:main Executing variant openblas provides openblas
872:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
873:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
874:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
875:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
876:debug:main Running callback portstartupitem::add_notes
877:debug:main Finished running callback portstartupitem::add_notes
878:debug:main No need to upgrade! sundials2 2.7.0_3 >= sundials2 2.7.0_3
879:debug:main epoch: in tree: 0 installed: 0
880:debug:main py36-mpi4py 3.0.0_0 exists in the ports tree
881:debug:main py36-mpi4py 3.0.0_0 +gfortran+openmpi is the latest installed
882:debug:main py36-mpi4py 3.0.0_0 +gfortran+openmpi is active
883:debug:main Merging existing variants '+gfortran+openmpi' into variants
884:debug:main new fully merged portvariants: openmpi + gfortran +
885:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-mpi4py
886:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
887:debug:main Re-registering default for build.cmd
888:debug:main Re-registering default for destroot.cmd
889:debug:main Re-registering default for destroot.destdir
890:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
891:debug:main Sourcing PortGroup bitbucket 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/bitbucket-1.0.tcl
892:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
893:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
894:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
895:debug:main Re-registering default for distname
896:debug:main Re-registering default for livecheck.type
897:debug:main Re-registering default for livecheck.url
898:debug:main Re-registering default for livecheck.regex
899:debug:main Re-registering default for livecheck.version
900:debug:main universal_variant is false, so not adding the default universal variant
901:debug:main Executing variant gfortran provides gfortran
902:debug:main Executing variant openmpi provides openmpi
903:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
904:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
905:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
906:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
907:debug:main Running callback portstartupitem::add_notes
908:debug:main Finished running callback portstartupitem::add_notes
909:debug:main No need to upgrade! py36-mpi4py 3.0.0_0 >= py36-mpi4py 3.0.0_0
910:debug:main epoch: in tree: 0 installed: 0
911:debug:main py36-numpy 1.15.4_0 exists in the ports tree
912:debug:main py36-numpy 1.15.4_0 +gfortran+openblas is the latest installed
913:debug:main py36-numpy 1.15.4_0 +gfortran+openblas is active
914:debug:main Merging existing variants '+gfortran+openblas-gcc6' into variants
915:debug:main new fully merged portvariants: openblas + gcc6 - gfortran +
916:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-numpy
917:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
918:debug:main Re-registering default for build.cmd
919:debug:main Re-registering default for destroot.cmd
920:debug:main Re-registering default for destroot.destdir
921:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
922:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
923:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
924:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
925:debug:main Re-registering default for livecheck.regex
926:debug:main adding the default universal variant
927:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
928:debug:main Executing variant gfortran provides gfortran
929:debug:main Executing variant openblas provides openblas
930:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
931:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
932:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
933:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
934:debug:main Running callback portstartupitem::add_notes
935:debug:main Finished running callback portstartupitem::add_notes
936:debug:main No need to upgrade! py36-numpy 1.15.4_0 >= py36-numpy 1.15.4_0
937:debug:main epoch: in tree: 0 installed: 0
938:debug:main fftw-3 3.3.8_0 exists in the ports tree
939:debug:main fftw-3 3.3.8_0 +gfortran+openmpi is the latest installed
940:debug:main fftw-3 3.3.8_0 +gfortran+openmpi is active
941:debug:main Merging existing variants '+gfortran+openmpi-gcc6-mpich' into variants
942:debug:main new fully merged portvariants: openmpi + mpich - gcc6 - gfortran +
943:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/fftw-3
944:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
945:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
946:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
947:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
948:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
949:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
950:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
951:debug:main compiler clang 900.0.37 not blacklisted because it doesn't match {clang <= 211.10.1}
952:debug:main universal variant already exists, so not adding the default one
953:debug:main Executing variant gfortran provides gfortran
954:debug:main Executing variant openmpi provides openmpi
955:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
956:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
957:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
958:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
959:debug:main Running callback portstartupitem::add_notes
960:debug:main Finished running callback portstartupitem::add_notes
961:debug:main No need to upgrade! fftw-3 3.3.8_0 >= fftw-3 3.3.8_0
962:debug:main epoch: in tree: 0 installed: 0
963:debug:main py36-nose 1.3.7_1 exists in the ports tree
964:debug:main py36-nose 1.3.7_1  is the latest installed
965:debug:main py36-nose 1.3.7_1  is active
966:debug:main Merging existing variants '' into variants
967:debug:main new fully merged portvariants:
968:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-nose
969:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
970:debug:main Re-registering default for build.cmd
971:debug:main Re-registering default for destroot.cmd
972:debug:main Re-registering default for destroot.destdir
973:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
974:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
975:debug:main only one arch supported, so not adding the default universal variant
976:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
977:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
978:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
979:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
980:debug:main Running callback portstartupitem::add_notes
981:debug:main Finished running callback portstartupitem::add_notes
982:debug:main No need to upgrade! py36-nose 1.3.7_1 >= py36-nose 1.3.7_1
983:debug:main epoch: in tree: 0 installed: 0
984:debug:main nosetests_select 0.1_0 exists in the ports tree
985:debug:main nosetests_select 0.1_0  is the latest installed
986:debug:main nosetests_select 0.1_0  is active
987:debug:main Merging existing variants '' into variants
988:debug:main new fully merged portvariants:
989:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/nosetests_select
990:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
991:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
992:debug:main universal_variant is false, so not adding the default universal variant
993:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
994:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
995:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
996:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
997:debug:main Running callback portstartupitem::add_notes
998:debug:main Finished running callback portstartupitem::add_notes
999:debug:main No need to upgrade! nosetests_select 0.1_0 >= nosetests_select 0.1_0
1000:msg:main --->  Computing dependencies for py36-petsc4py:info:main .:debug:main py36-petsc4py has no conflicts
1001:debug:main Searching for dependency: py36-setuptools
1002:debug:main Found Dependency: receipt exists for py36-setuptools
1003:debug:main Searching for dependency: py36-cython
1004:debug:main Found Dependency: receipt exists for py36-cython
1005:debug:main Searching for dependency: gcc8
1006:debug:main Found Dependency: receipt exists for gcc8
1007:debug:main Searching for dependency: python36
1008:debug:main Found Dependency: receipt exists for python36
1009:debug:main Searching for dependency: petsc
1010:debug:main Found Dependency: receipt exists for petsc
1011:debug:main Searching for dependency: py36-mpi4py
1012:debug:main Found Dependency: receipt exists for py36-mpi4py
1013:debug:main Searching for dependency: py36-numpy
1014:debug:main Found Dependency: receipt exists for py36-numpy
1015:debug:main Searching for dependency: libgcc
1016:debug:main Found Dependency: receipt exists for libgcc
1017:debug:main Searching for dependency: openmpi-default
1018:debug:main Found Dependency: receipt exists for openmpi-default
1019:debug:main Executing org.macports.main (py36-petsc4py)
1020:debug:main dropping privileges: euid changed to 504, egid changed to 501.
1021:debug:archivefetch archivefetch phase started at Fri Nov 30 12:42:38 MST 2018
1022:msg:archivefetch --->  Fetching archive for py36-petsc4py
1023:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
1024:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-1
1025:debug:archivefetch mpi.enforce_variant list: py36-mpi4py
1026:debug:archivefetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1027:debug:archivefetch   required: , forbidden:
1028:debug:archivefetch   accepted
1029:debug:archivefetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1030:debug:archivefetch   required: mpich, forbidden:
1031:debug:archivefetch   rejected, because required variant mpich is missing
1032:debug:archivefetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1033:debug:archivefetch   required: mpich_devel, forbidden:
1034:debug:archivefetch   rejected, because required variant mpich_devel is missing
1035:debug:archivefetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1036:debug:archivefetch   required: openmpi, forbidden:
1037:debug:archivefetch   accepted
1038:debug:archivefetch Executing org.macports.archivefetch (py36-petsc4py)
1039:debug:archivefetch euid/egid changed to: 0/0
1040:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
1041:debug:archivefetch euid/egid changed to: 504/501
1042:info:archivefetch --->  py36-petsc4py-3.8.1_0+gfortran+openmpi.darwin_16.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
1043:msg:archivefetch --->  Attempting to fetch py36-petsc4py-3.8.1_0+gfortran+openmpi.darwin_16.x86_64.tbz2 from https://packages.macports.org/py36-petsc4py
1044:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
1045:msg:archivefetch --->  Attempting to fetch py36-petsc4py-3.8.1_0+gfortran+openmpi.darwin_16.x86_64.tbz2 from http://sea.us.packages.macports.org/macports/packages/py36-petsc4py
1046:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
1047:msg:archivefetch --->  Attempting to fetch py36-petsc4py-3.8.1_0+gfortran+openmpi.darwin_16.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/py36-petsc4py
1048:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
1049:debug:archivefetch Privilege de-escalation not attempted as not running as root.
1050:debug:fetch fetch phase started at Fri Nov 30 12:42:40 MST 2018
1051:notice:fetch --->  Fetching distfiles for py36-petsc4py
1052:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
1053:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
1054:debug:fetch mpi.enforce_variant list: py36-mpi4py
1055:debug:fetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1056:debug:fetch   required: , forbidden:
1057:debug:fetch   accepted
1058:debug:fetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1059:debug:fetch   required: mpich, forbidden:
1060:debug:fetch   rejected, because required variant mpich is missing
1061:debug:fetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1062:debug:fetch   required: mpich_devel, forbidden:
1063:debug:fetch   rejected, because required variant mpich_devel is missing
1064:debug:fetch py36-mpi4py is installed with the following variants: +gfortran+openmpi
1065:debug:fetch   required: openmpi, forbidden:
1066:debug:fetch   accepted
1067:debug:fetch Executing org.macports.fetch (py36-petsc4py)
1068:debug:fetch Privilege de-escalation not attempted as not running as root.
1069:debug:checksum checksum phase started at Fri Nov 30 12:42:40 MST 2018
1070:notice:checksum --->  Verifying checksums for py36-petsc4py
1071:debug:checksum Executing org.macports.checksum (py36-petsc4py)
1072:info:checksum --->  Checksumming 3.8.1.tar.gz
1073:debug:checksum Calculated (rmd160) is a86fd9d249f498e74822375b2bc4c0ceae8cc96b
1074:debug:checksum Correct (rmd160) checksum for 3.8.1.tar.gz
1075:debug:checksum Calculated (sha256) is da07ffef7da61164ad75b23af59860fea467ae47532302d91b7b4ec561aa0f9c
1076:debug:checksum Correct (sha256) checksum for 3.8.1.tar.gz
1077:debug:checksum Privilege de-escalation not attempted as not running as root.
1078:debug:extract extract phase started at Fri Nov 30 12:42:40 MST 2018
1079:notice:extract --->  Extracting py36-petsc4py
1080:debug:extract Executing org.macports.extract (py36-petsc4py)
1081:info:extract --->  Extracting 3.8.1.tar.gz
1082:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/py-petsc4py/3.8.1.tar.gz'
1083:debug:extract Environment:
1084:debug:extract CC_PRINT_OPTIONS='YES'
1085:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/.CC_PRINT_OPTIONS'
1086:debug:extract CPATH='/opt/local/include'
1087:debug:extract LIBRARY_PATH='/opt/local/lib'
1088:debug:extract MACOSX_DEPLOYMENT_TARGET='10.12'
1089:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-petsc4py/3.8.1.tar.gz' | /usr/bin/tar -xf -
1090:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-petsc4py/3.8.1.tar.gz' | /usr/bin/tar -xf -
1091:debug:extract euid/egid changed to: 0/0
1092:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work to macports
1093:debug:extract euid/egid changed to: 504/501
1094:debug:extract Executing proc-post-org.macports.extract-extract-0
1095:debug:extract Executing proc-post-org.macports.extract-extract-1
1096:debug:extract Privilege de-escalation not attempted as not running as root.
1097:debug:patch patch phase started at Fri Nov 30 12:42:40 MST 2018
1098:debug:patch Executing org.macports.patch (py36-petsc4py)
1099:debug:patch Privilege de-escalation not attempted as not running as root.
1100:debug:configure configure phase started at Fri Nov 30 12:42:40 MST 2018
1101:notice:configure --->  Configuring py36-petsc4py
1102:debug:configure Preferred compilers: clang macports-clang-5.0 macports-clang-4.0 macports-clang-3.9
1103:debug:configure Using compiler 'Xcode Clang'
1104:debug:configure Executing proc-pre-org.macports.configure-configure-0
1105:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: python36 petsc py36-mpi4py py36-numpy libgcc openmpi-default py36-setuptools py36-cython gcc8
1106:debug:configure Ignoring active_variants requirement for openmpi because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain openmpi
1107:debug:configure Executing proc-pre-org.macports.configure-configure-1
1108:debug:configure compilers.enforce_c list:
1109:debug:configure compilers.enforce_fortran list:
1110:debug:configure compilers.enforce_some_fortran list:
1111:debug:configure Executing proc-pre-org.macports.configure-configure-2
1112:debug:configure openmpi-default is installed with the following variants: +gcc8
1113:debug:configure   required: gcc45, forbidden:
1114:debug:configure   rejected, because required variant gcc45 is missing
1115:debug:configure openmpi-default is installed with the following variants: +gcc8
1116:debug:configure   required: gcc49, forbidden:
1117:debug:configure   rejected, because required variant gcc49 is missing
1118:debug:configure openmpi-default is installed with the following variants: +gcc8
1119:debug:configure   required: gcc8, forbidden:
1120:debug:configure   accepted
1121:debug:configure Executing org.macports.configure (py36-petsc4py)
1122:debug:configure Privilege de-escalation not attempted as not running as root.
1123:debug:build build phase started at Fri Nov 30 12:42:40 MST 2018
1124:notice:build --->  Building py36-petsc4py
1125:debug:build Executing proc-pre-org.macports.build-build-0
1126:debug:build Executing org.macports.build (py36-petsc4py)
1127:debug:build Environment:
1128:debug:build CC='/opt/local/bin/mpicc-openmpi-mp'
1129:debug:build CC_PRINT_OPTIONS='YES'
1130:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/.CC_PRINT_OPTIONS'
1131:debug:build CFLAGS='-arch x86_64'
1132:debug:build CPATH='/opt/local/include'
1133:debug:build CXX='/opt/local/bin/mpicxx-openmpi-mp'
1134:debug:build CXXFLAGS='-arch x86_64'
1135:debug:build F77='/opt/local/bin/mpif77-openmpi-mp'
1136:debug:build F90='/opt/local/bin/mpif90-openmpi-mp'
1137:debug:build F90FLAGS='-m64'
1138:debug:build FC='/opt/local/bin/mpif90-openmpi-mp'
1139:debug:build FCFLAGS='-m64'
1140:debug:build FFLAGS='-m64'
1141:debug:build LDFLAGS='-arch x86_64'
1142:debug:build LIBRARY_PATH='/opt/local/lib'
1143:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
1144:debug:build OBJC='/usr/bin/clang'
1145:debug:build OBJCFLAGS='-arch x86_64'
1146:debug:build PETSC_DIR='/opt/local/lib/petsc'
1147:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/3.8.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.6/bin/python3.6 setup.py --no-user-cfg build
1148:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/3.8.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.6/bin/python3.6 setup.py --no-user-cfg build
1149:info:build running build
1150:info:build running build_src
1151:info:build cythonizing 'petsc4py.PETSc.pyx' -> 'petsc4py.PETSc.c'
1152:info:build cythonizing 'libpetsc4py/libpetsc4py.pyx' -> 'libpetsc4py/libpetsc4py.c'
1153:info:build running build_py
1154:info:build creating build
1155:info:build creating build/lib.macosx-10.12-x86_64-3.6
1156:info:build creating build/lib.macosx-10.12-x86_64-3.6/petsc4py
1157:info:build copying src/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/petsc4py
1158:info:build copying src/__main__.py -> build/lib.macosx-10.12-x86_64-3.6/petsc4py
1159:info:build copying src/PETSc.py -> build/lib.macosx-10.12-x86_64-3.6/petsc4py
1160:info:build creating build/lib.macosx-10.12-x86_64-3.6/petsc4py/lib
1161:info:build copying src/lib/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/lib
1162:info:build creating build/lib.macosx-10.12-x86_64-3.6/petsc4py/include
1163:info:build creating build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1164:info:build copying src/include/petsc4py/numpy.h -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1165:info:build copying src/include/petsc4py/petsc4py.h -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1166:info:build copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1167:info:build copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1168:info:build copying src/include/petsc4py/petsc4py.i -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1169:info:build copying src/include/petsc4py/__init__.pxd -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1170:info:build copying src/include/petsc4py/PETSc.pxd -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1171:info:build copying src/include/petsc4py/__init__.pyx -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/include/petsc4py
1172:info:build copying src/PETSc.pxd -> build/lib.macosx-10.12-x86_64-3.6/petsc4py
1173:info:build copying src/lib/petsc.cfg -> build/lib.macosx-10.12-x86_64-3.6/petsc4py/lib
1174:info:build running build_ext
1175:info:build PETSC_DIR:    /opt/local/lib/petsc
1176:info:build PETSC_ARCH:   
1177:info:build version:      3.9.3 release
1178:info:build integer-size: 32-bit
1179:info:build scalar-type:  real
1180:info:build precision:    double
1181:info:build language:     CONLY
1182:info:build compiler:     /opt/local/bin/mpicc-openmpi-mp
1183:info:build linker:       /opt/local/bin/mpicc-openmpi-mp
1184:info:build building 'PETSc' extension
1185:info:build creating build/temp.macosx-10.12-x86_64-3.6
1186:info:build creating build/temp.macosx-10.12-x86_64-3.6/src
1187:info:build /opt/local/bin/mpicc-openmpi-mp -pipe -arch x86_64 -Os -I/opt/local/include -arch x86_64 -DPETSC_DIR=/opt/local/lib/petsc -I/opt/local/include -I/opt/local/lib/petsc/include -Isrc/include -I/opt/local/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/include -I/opt/local/Library/Frameworks/Python.framework/Versions/3.6/include/python3.6m -c src/PETSc.c -o build/temp.macosx-10.12-x86_64-3.6/src/PETSc.o
1188:info:build In file included from src/PETSc.c:4:
1189:info:build src/petsc4py.PETSc.c:150459:47: warning: 'PCFactorSetMatSolverPackage' is deprecated [-Wdeprecated-declarations]
1190:info:build   __pyx_t_2 = __pyx_f_8petsc4py_5PETSc_CHKERR(PCFactorSetMatSolverPackage(__pyx_v_self->pc, __pyx_v_cval)); if (unlikely(__pyx_t_2 == ((int)-1))) __PYX_ERR(34, 354, __pyx_L1_error)
1191:info:build                                               ^
1192:info:build /opt/local/lib/petsc/include/petscpc.h:123:1: note: 'PCFactorSetMatSolverPackage' has been explicitly marked deprecated here
1193:info:build PETSC_DEPRECATED("Use PCFactorSetMatSolverType") PETSC_STATIC_INLINE PetscErrorCode PCFactorSetMatSolverPackage(PC pc,MatSolverType stype)
1194:info:build ^
1195:info:build /opt/local/lib/petsc/include/petscconf.h:37:44: note: expanded from macro 'PETSC_DEPRECATED'
1196:info:build #define PETSC_DEPRECATED(why) __attribute((deprecated))
1197:info:build                                            ^
1198:info:build In file included from src/PETSc.c:4:
1199:info:build src/petsc4py.PETSc.c:150532:47: warning: 'PCFactorGetMatSolverPackage' is deprecated [-Wdeprecated-declarations]
1200:info:build   __pyx_t_1 = __pyx_f_8petsc4py_5PETSc_CHKERR(PCFactorGetMatSolverPackage(__pyx_v_self->pc, (&__pyx_v_cval))); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(34, 358, __pyx_L1_error)
1201:info:build                                               ^
1202:info:build /opt/local/lib/petsc/include/petscpc.h:125:1: note: 'PCFactorGetMatSolverPackage' has been explicitly marked deprecated here
1203:info:build PETSC_DEPRECATED("Use PCFactorGetMatSolverType") PETSC_STATIC_INLINE PetscErrorCode PCFactorGetMatSolverPackage(PC pc,MatSolverType *stype)
1204:info:build ^
1205:info:build /opt/local/lib/petsc/include/petscconf.h:37:44: note: expanded from macro 'PETSC_DEPRECATED'
1206:info:build #define PETSC_DEPRECATED(why) __attribute((deprecated))
1207:info:build                                            ^
1208:info:build In file included from src/PETSc.c:4:
1209:info:build src/petsc4py.PETSc.c:228493:147: error: too few arguments to function call, expected 9, have 5
1210:info:build   __pyx_t_4 = __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, __pyx_v_cdim, __pyx_v_cnumFaces, __pyx_v_interp, (&__pyx_v_newdm))); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(42, 50, __pyx_L1_error)
1211:info:build                                               ~~~~~~~~~~~~~~~~~~~                                                                                 ^
1212:info:build /opt/local/lib/petsc/include/petscdmplex.h:130:1: note: 'DMPlexCreateBoxMesh' declared here
1213:info:build PETSC_EXTERN PetscErrorCode DMPlexCreateBoxMesh(MPI_Comm, PetscInt, PetscBool, const PetscInt[], const PetscReal[], const PetscReal[], const DMBoundaryType[], PetscBool, DM *);
1214:info:build ^
1215:info:build /opt/local/lib/petsc/include/petscsys.h:102:22: note: expanded from macro 'PETSC_EXTERN'
1216:info:build #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
1217:info:build                      ^
1218:info:build In file included from src/PETSc.c:4:
1219:info:build src/petsc4py.PETSc.c:228745:47: warning: implicit declaration of function 'DMPlexCreateHexBoxMesh' is invalid in C99 [-Wimplicit-function-declaration]
1220:info:build   __pyx_t_6 = __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateHexBoxMesh(__pyx_v_ccomm, __pyx_v_dim, __pyx_v_icells, __pyx_v_btx, __pyx_v_bty, __pyx_v_btz, (&__pyx_v_newdm))); if (unlikely(__pyx_t_6 == ((int)-1))) __PYX_ERR(42, 64, __pyx_L1_error)
1221:info:build                                               ^
1222:info:build src/petsc4py.PETSc.c:236455:112: error: too few arguments to function call, expected 3, have 2
1223:info:build   __pyx_t_6 = __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexMarkBoundaryFaces(__pyx_v_self->__pyx_base.dm, __pyx_v_clbl)); if (unlikely(__pyx_t_6 == ((int)-1))) __PYX_ERR(42, 435, __pyx_L1_error)
1224:info:build                                               ~~~~~~~~~~~~~~~~~~~~~~~                                          ^
1225:info:build /opt/local/lib/petsc/include/petscdmplex.h:257:1: note: 'DMPlexMarkBoundaryFaces' declared here
1226:info:build PETSC_EXTERN PetscErrorCode DMPlexMarkBoundaryFaces(DM, PetscInt, DMLabel);
1227:info:build ^
1228:info:build /opt/local/lib/petsc/include/petscsys.h:102:22: note: expanded from macro 'PETSC_EXTERN'
1229:info:build #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
1230:info:build                      ^
1231:info:build In file included from src/PETSc.c:4:
1232:info:build src/petsc4py.PETSc.c:246865:100: warning: incompatible pointer types passing 'int (DM, PetscInt, PetscInt *, IS *, DM *)' (aka 'int (struct _p_DM *, int, int *, struct _p_IS **, struct _p_DM **)') to parameter of type 'PetscErrorCode (*)(DM, PetscInt, const PetscInt *, IS *, DM *)' (aka 'int (*)(struct _p_DM *, int, const int *, struct _p_IS **, struct _p_DM **)') [-Wincompatible-pointer-types]
1233:info:build     __pyx_t_4 = __pyx_f_8petsc4py_5PETSc_CHKERR(DMShellSetCreateSubDM(__pyx_v_self->__pyx_base.dm, __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateSubDM)); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(44, 197, __pyx_L1_error)
1234:info:build                                                                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1235:info:build /opt/local/lib/petsc/include/petscdmshell.h:29:71: note: passing argument to parameter here
1236:info:build PETSC_EXTERN PetscErrorCode DMShellSetCreateSubDM(DM,PetscErrorCode (*)(DM,PetscInt,const PetscInt[],IS*,DM*));
1237:info:build                                                                       ^
1238:info:build In file included from src/PETSc.c:4:
1239:info:build src/petsc4py.PETSc.c:268028:43: error: use of undeclared identifier 'VECSEQCUSP'
1240:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(VECSEQCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(30, 8, __pyx_L1_error)
1241:info:build                                           ^
1242:info:build src/petsc4py.PETSc.c:268040:43: error: use of undeclared identifier 'VECMPICUSP'
1243:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(VECMPICUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(30, 9, __pyx_L1_error)
1244:info:build                                           ^
1245:info:build src/petsc4py.PETSc.c:268052:43: error: use of undeclared identifier 'VECCUSP'
1246:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(VECCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(30, 10, __pyx_L1_error)
1247:info:build                                           ^
1248:info:build src/petsc4py.PETSc.c:268461:43: error: use of undeclared identifier 'MATAIJCUSP'
1249:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(MATAIJCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(33, 15, __pyx_L1_error)
1250:info:build                                           ^
1251:info:build src/petsc4py.PETSc.c:268473:43: error: use of undeclared identifier 'MATSEQAIJCUSP'
1252:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(MATSEQAIJCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(33, 16, __pyx_L1_error)
1253:info:build                                           ^
1254:info:build src/petsc4py.PETSc.c:268485:43: error: use of undeclared identifier 'MATMPIAIJCUSP'
1255:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(MATMPIAIJCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(33, 17, __pyx_L1_error)
1256:info:build                                           ^
1257:info:build src/petsc4py.PETSc.c:270698:43: error: use of undeclared identifier 'PCSACUSP'
1258:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(PCSACUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(34, 41, __pyx_L1_error)
1259:info:build                                           ^
1260:info:build src/petsc4py.PETSc.c:270710:43: error: use of undeclared identifier 'PCSACUSPPOLY'
1261:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(PCSACUSPPOLY); if (unlikely(!__pyx_t_7)) __PYX_ERR(34, 42, __pyx_L1_error)
1262:info:build                                           ^
1263:info:build src/petsc4py.PETSc.c:270722:43: error: use of undeclared identifier 'PCBICGSTABCUSP'
1264:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(PCBICGSTABCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(34, 43, __pyx_L1_error)
1265:info:build                                           ^
1266:info:build src/petsc4py.PETSc.c:270734:43: error: use of undeclared identifier 'PCAINVCUSP'
1267:info:build   __pyx_t_7 = __pyx_f_8petsc4py_5PETSc_S_(PCAINVCUSP); if (unlikely(!__pyx_t_7)) __PYX_ERR(34, 44, __pyx_L1_error)
1268:info:build                                           ^
1269:info:build 4 warnings and 12 errors generated.
1270:info:build /opt/local/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: include/petsc4py/PETSc.pxd
1271:info:build   tree = Parsing.p_module(s, pxd, full_module_name)
1272:info:build warning: PETSc/petscobj.pxi:126:4: 'Py_intptr_t' redeclared
1273:info:build warning: PETSc/petscsec.pxi:6:4: 'PetscSection' redeclared
1274:info:build warning: PETSc/petscsf.pxi:21:4: 'PetscSFNode' redeclared
1275:info:build /opt/local/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/3.8.1/src/libpetsc4py/libpetsc4py.pyx
1276:info:build   tree = Parsing.p_module(s, pxd, full_module_name)
1277:info:build error: command '/opt/local/bin/mpicc-openmpi-mp' failed with exit status 1
1278:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/work/3.8.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.6/bin/python3.6 setup.py --no-user-cfg build
1279:info:build Exit code: 1
1280:error:build Failed to build py36-petsc4py: command execution failed
1281:debug:build Error code: CHILDSTATUS 22968 1
1282:debug:build Backtrace: command execution failed
1283:debug:build     while executing
1284:debug:build "system {*}$notty {*}$nice $fullcmdstring"
1285:debug:build     invoked from within
1286:debug:build "command_exec build"
1287:debug:build     (procedure "portbuild::build_main" line 8)
1288:debug:build     invoked from within
1289:debug:build "$procedure $targetname"
1290:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-petsc4py/py36-petsc4py/main.log for details.