Ticket #68787: main.log

File main.log, 14.8 KB (added by odysseus9672 (Sean Lake), 10 months ago)

scipy build log.

Line 
1version:1
2:debug:main Starting logging for py38-scipy @1.10.1_1+gfortran+openblas
3:debug:sysinfo macOS 13.4 (darwin/22.5.0) arch i386
4:debug:sysinfo MacPorts 2.8.1
5:debug:sysinfo Xcode 14.2, CLT 14.3.1.0.1.1683849156
6:debug:sysinfo SDK 13
7:debug:sysinfo MACOSX_DEPLOYMENT_TARGET: 13.0
8:msg:main --->  Computing dependencies for py38-scipy:info:main .:debug:main py38-scipy has no conflicts
9:debug:main Searching for dependency: py38-pythran
10:debug:main Found Dependency: receipt exists for py38-pythran
11:debug:main Searching for dependency: swig-python
12:debug:main Found Dependency: receipt exists for swig-python
13:debug:main Searching for dependency: gcc13
14:debug:main Found Dependency: receipt exists for gcc13
15:debug:main Searching for dependency: py38-mypy
16:debug:main Found Dependency: receipt exists for py38-mypy
17:debug:main Searching for dependency: py38-numpy
18:debug:main Found Dependency: receipt exists for py38-numpy
19:debug:main Searching for dependency: py38-pybind11
20:debug:main Found Dependency: receipt exists for py38-pybind11
21:debug:main Searching for dependency: libgcc
22:debug:main Found Dependency: receipt exists for libgcc
23:debug:main Searching for dependency: OpenBLAS
24:debug:main Found Dependency: receipt exists for OpenBLAS
25:debug:main Searching for dependency: python38
26:debug:main Found Dependency: receipt exists for python38
27:debug:main Searching for dependency: boost176
28:debug:main Found Dependency: receipt exists for boost176
29:debug:main Executing org.macports.main (py38-scipy)
30:debug:main dropping privileges: euid changed to 502, egid changed to 501.
31:debug:archivefetch archivefetch phase started at Mon Nov 27 13:17:36 MST 2023
32:msg:archivefetch --->  Fetching archive for py38-scipy
33:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
34:debug:archivefetch Executing org.macports.archivefetch (py38-scipy)
35:debug:archivefetch euid/egid changed to: 0/0
36:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
37:debug:archivefetch euid/egid changed to: 502/501
38:info:archivefetch --->  py38-scipy-1.10.1_1+gfortran+openblas.darwin_22.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
39:msg:archivefetch --->  Attempting to fetch py38-scipy-1.10.1_1+gfortran+openblas.darwin_22.x86_64.tbz2 from https://packages.macports.org/py38-scipy
40:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
41:msg:archivefetch --->  Attempting to fetch py38-scipy-1.10.1_1+gfortran+openblas.darwin_22.x86_64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-scipy
42:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
43:msg:archivefetch --->  Attempting to fetch py38-scipy-1.10.1_1+gfortran+openblas.darwin_22.x86_64.tbz2 from http://mirror.fcix.net/macports/packages/py38-scipy
44:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
45:debug:archivefetch Privilege de-escalation not attempted as not running as root.
46:debug:fetch fetch phase started at Mon Nov 27 13:17:37 MST 2023
47:notice:fetch --->  Fetching distfiles for py38-scipy
48:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
49:debug:fetch Executing org.macports.fetch (py38-scipy)
50:info:fetch --->  scipy-1.10.1.tar.gz does not exist in /opt/local/var/macports/distfiles/py-scipy
51:notice:fetch --->  Attempting to fetch scipy-1.10.1.tar.gz from https://distfiles.macports.org/py-scipy
52:debug:fetch Privilege de-escalation not attempted as not running as root.
53:debug:checksum checksum phase started at Mon Nov 27 13:17:41 MST 2023
54:notice:checksum --->  Verifying checksums for py38-scipy
55:debug:checksum Executing org.macports.checksum (py38-scipy)
56:info:checksum --->  Checksumming scipy-1.10.1.tar.gz
57:debug:checksum Calculated (rmd160) is a97f16d6acefbc7e52b81499d250226e0cce114d
58:debug:checksum Correct (rmd160) checksum for scipy-1.10.1.tar.gz
59:debug:checksum Calculated (sha256) is 2cf9dfb80a7b4589ba4c40ce7588986d6d5cebc5457cad2c2880f6bc2d42f3a5
60:debug:checksum Correct (sha256) checksum for scipy-1.10.1.tar.gz
61:debug:checksum Calculated (size) is 42407997
62:debug:checksum Correct (size) checksum for scipy-1.10.1.tar.gz
63:debug:checksum Privilege de-escalation not attempted as not running as root.
64:debug:extract extract phase started at Mon Nov 27 13:17:41 MST 2023
65:notice:extract --->  Extracting py38-scipy
66:debug:extract Executing org.macports.extract (py38-scipy)
67:info:extract --->  Extracting scipy-1.10.1.tar.gz
68:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/py-scipy/scipy-1.10.1.tar.gz'
69:debug:extract Environment:
70:debug:extract CC_PRINT_OPTIONS='YES'
71:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/.CC_PRINT_OPTIONS'
72:debug:extract CPATH='/opt/local/libexec/boost/1.76/include:/opt/local/include'
73:debug:extract DEVELOPER_DIR='/Library/Developer/CommandLineTools'
74:debug:extract LIBRARY_PATH='/opt/local/lib'
75:debug:extract MACOSX_DEPLOYMENT_TARGET='13.0'
76:debug:extract MACPORTS_LEGACY_SUPPORT_DISABLED='1'
77:debug:extract SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
78:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-scipy/scipy-1.10.1.tar.gz' | /usr/bin/tar -xf -
79:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-scipy/scipy-1.10.1.tar.gz' | /usr/bin/tar -xf -
80:debug:extract euid/egid changed to: 0/0
81:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work to macports
82:debug:extract euid/egid changed to: 502/501
83:debug:extract Executing proc-post-org.macports.extract-extract-0
84:debug:extract Privilege de-escalation not attempted as not running as root.
85:debug:patch patch phase started at Mon Nov 27 13:17:47 MST 2023
86:debug:patch Executing org.macports.patch (py38-scipy)
87:notice:patch --->  Applying patches to py38-scipy
88:info:patch --->  Applying patch-allow-MP-boost.diff
89:debug:patch Environment:
90:debug:patch CC_PRINT_OPTIONS='YES'
91:debug:patch CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/.CC_PRINT_OPTIONS'
92:debug:patch CPATH='/opt/local/libexec/boost/1.76/include:/opt/local/include'
93:debug:patch DEVELOPER_DIR='/Library/Developer/CommandLineTools'
94:debug:patch LIBRARY_PATH='/opt/local/lib'
95:debug:patch MACOSX_DEPLOYMENT_TARGET='13.0'
96:debug:patch SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
97:info:patch Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-scipy/files/patch-allow-MP-boost.diff'
98:debug:patch system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-scipy/files/patch-allow-MP-boost.diff'
99:info:patch patching file 'scipy/_lib/setup.py'
100:info:patch --->  Applying patch-use__STDC_NO_THREADS__.diff
101:debug:patch Environment:
102:debug:patch CC_PRINT_OPTIONS='YES'
103:debug:patch CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/.CC_PRINT_OPTIONS'
104:debug:patch CPATH='/opt/local/libexec/boost/1.76/include:/opt/local/include'
105:debug:patch DEVELOPER_DIR='/Library/Developer/CommandLineTools'
106:debug:patch LIBRARY_PATH='/opt/local/lib'
107:debug:patch MACOSX_DEPLOYMENT_TARGET='13.0'
108:debug:patch SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
109:info:patch Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-scipy/files/patch-use__STDC_NO_THREADS__.diff'
110:debug:patch system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/python/py-scipy/files/patch-use__STDC_NO_THREADS__.diff'
111:info:patch patching file 'scipy/integrate/setup.py'
112:info:patch patching file 'scipy/linalg/setup.py'
113:info:patch patching file 'scipy/optimize/setup.py'
114:info:patch patching file 'scipy/sparse/linalg/_propack/setup.py'
115:debug:patch Privilege de-escalation not attempted as not running as root.
116:debug:configure configure phase started at Mon Nov 27 13:17:47 MST 2023
117:notice:configure --->  Configuring py38-scipy
118:debug:configure Preferred compilers: clang macports-clang-17 macports-clang-16 macports-clang-15 macports-clang-14 macports-clang-13 macports-clang-12 macports-clang-11 macports-clang-10 macports-clang-9.0
119:debug:configure Using compiler 'Xcode Clang'
120:debug:configure Executing proc-pre-org.macports.configure-configure-0
121:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: py38-mypy py38-numpy py38-pybind11 libgcc OpenBLAS python38 boost176 py38-pythran swig-python gcc13
122:debug:configure Executing proc-pre-org.macports.configure-configure-1
123:debug:configure compilers.enforce_c list:
124:debug:configure compilers.enforce_fortran list:
125:debug:configure compilers.enforce_some_fortran list:
126:debug:configure Executing proc-pre-org.macports.configure-configure-2
127:debug:configure Executing org.macports.configure (py38-scipy)
128:debug:configure Executing portconfigure::configure_finish
129:debug:configure Privilege de-escalation not attempted as not running as root.
130:debug:build build phase started at Mon Nov 27 13:17:47 MST 2023
131:notice:build --->  Building py38-scipy
132:debug:build Executing proc-pre-org.macports.build-build-0
133:debug:build Executing org.macports.build (py38-scipy)
134:debug:build Environment:
135:debug:build ATLAS='None'
136:debug:build BOOSTDIR='/opt/local/libexec/boost/1.76'
137:debug:build BOOSTROOT='/opt/local/libexec/boost/1.76'
138:debug:build BOOST_DIR='/opt/local/libexec/boost/1.76'
139:debug:build BOOST_INCLUDEDIR='/opt/local/libexec/boost/1.76/include'
140:debug:build BOOST_LIBRARYDIR='/opt/local/libexec/boost/1.76/lib'
141:debug:build BOOST_ROOT='/opt/local/libexec/boost/1.76'
142:debug:build CC='/usr/bin/clang'
143:debug:build CCFLAGS='-I/opt/local/include -L/opt/local/lib'
144:debug:build CC_PRINT_OPTIONS='YES'
145:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/.CC_PRINT_OPTIONS'
146:debug:build CFLAGS='-isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
147:debug:build CPATH='/opt/local/libexec/boost/1.76/include:/opt/local/include'
148:debug:build CPPFLAGS='-I/opt/local/libexec/boost/1.76/include -I/opt/local/include'
149:debug:build CXX='/usr/bin/clang++'
150:debug:build CXXFLAGS='-stdlib=libc++ -isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
151:debug:build DEVELOPER_DIR='/Library/Developer/CommandLineTools'
152:debug:build F77='/opt/local/bin/gfortran-mp-13'
153:debug:build F90='/opt/local/bin/gfortran-mp-13'
154:debug:build FC='/opt/local/bin/gfortran-mp-13'
155:debug:build LIBRARY_PATH='/opt/local/lib'
156:debug:build MACOSX_DEPLOYMENT_TARGET='13.0'
157:debug:build MACPORTS_LEGACY_SUPPORT_DISABLED='1'
158:debug:build MKLROOT='None'
159:debug:build OBJC='/usr/bin/clang'
160:debug:build OBJCFLAGS='-isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
161:debug:build OPENBLAS='/opt/local/lib'
162:debug:build SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
163:debug:build SETUPTOOLS_USE_DISTUTILS='stdlib'
164:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.8/bin/python3.8 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-13 --f77flags='-m64 -Os -fno-second-underscore' --f90exec /opt/local/bin/gfortran-mp-13 --f90flags='-m64 -Os -fno-second-underscore' config --cc /usr/bin/clang --include-dirs /opt/local/include --library-dirs /opt/local/lib build -j12
165:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.8/bin/python3.8 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-13 --f77flags='-m64 -Os -fno-second-underscore' --f90exec /opt/local/bin/gfortran-mp-13 --f90flags='-m64 -Os -fno-second-underscore' config --cc /usr/bin/clang --include-dirs /opt/local/include --library-dirs /opt/local/lib build -j12
166:info:build Error: 'numpy' must be installed before running the build.
167:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/work/scipy-1.10.1" && /opt/local/Library/Frameworks/Python.framework/Versions/3.8/bin/python3.8 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-13 --f77flags='-m64 -Os -fno-second-underscore' --f90exec /opt/local/bin/gfortran-mp-13 --f90flags='-m64 -Os -fno-second-underscore' config --cc /usr/bin/clang --include-dirs /opt/local/include --library-dirs /opt/local/lib build -j12
168:info:build Exit code: 1
169:error:build Failed to build py38-scipy: command execution failed
170:debug:build Error code: CHILDSTATUS 28693 1
171:debug:build Backtrace: command execution failed
172:debug:build     while executing
173:debug:build "system {*}$notty {*}$callback {*}$nice $fullcmdstring"
174:debug:build     invoked from within
175:debug:build "command_exec -callback portprogress::target_progress_callback build"
176:debug:build     (procedure "portbuild::build_main" line 8)
177:debug:build     invoked from within
178:debug:build "$procedure $targetname"
179:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-scipy/py38-scipy/main.log for details.