DEBUG: Changing to port directory: /opt/bblocal/var/buildworker/ports/build/ports/science/netcdf-fortran DEBUG: OS darwin/13.4.0 (macOS 10.9.5) arch i386 DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: GCC versions for Darwin 13 i386 - 5 6 7 8 9 10 11 12 devel DEBUG: Clang versions for Darwin 13 i386 - 3.4 3.7 5.0 6.0 7.0 8.0 9.0 10 11 12 13 14 15 16 DEBUG: Sourcing PortGroup compilers 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: Sourcing PortGroup github 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: Re-registering default for extract.rename DEBUG: Re-registering default for livecheck.url DEBUG: Re-registering default for livecheck.regex DEBUG: muniversal: adding universal variant DEBUG: Reading variant descriptions from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Executing variant gcc12 provides gcc12 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Running callback portstartupitem::add_notes DEBUG: Finished running callback portstartupitem::add_notes DEBUG: Running callback compilers::add_fortran_legacy_support DEBUG: Finished running callback compilers::add_fortran_legacy_support DEBUG: Running callback compilers::add_gcc_rpath_support DEBUG: compilers PG: RPATH added to ldflags as GCC version is 12 DEBUG: Finished running callback compilers::add_gcc_rpath_support DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Starting logging for netcdf-fortran @4.6.1_0+gcc12 DEBUG: OS X 10.9.5 (darwin/13.4.0) arch i386 DEBUG: MacPorts 2.8.1 DEBUG: Xcode 6.2, CLT 6.2.0.0.1.1424975374 DEBUG: SDK 10.9 DEBUG: MACOSX_DEPLOYMENT_TARGET: 10.9 DEBUG: Executing org.macports.main (netcdf-fortran) DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: fetch phase started at Wed Aug 30 04:16:54 UTC 2023 ---> Fetching distfiles for netcdf-fortran DEBUG: elevating privileges for fetch: euid changed to 0, egid changed to 0. DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Executing proc-pre-org.macports.fetch-fetch-0 DEBUG: Executing proc-pre-org.macports.fetch-fetch-1 DEBUG: mpi.enforce_variant list: netcdf DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: , forbidden: DEBUG: accepted DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: mpich, forbidden: DEBUG: rejected, because required variant mpich is missing DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: openmpi, forbidden: DEBUG: rejected, because required variant openmpi is missing DEBUG: Executing org.macports.fetch (netcdf-fortran) ---> netcdf-fortran-4.6.1.tar.gz does not exist in /opt/local/var/macports/distfiles/netcdf-fortran ---> Attempting to fetch netcdf-fortran-4.6.1.tar.gz from http://distfiles.macports.org/netcdf-fortran % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1998k 100 1998k 0 0 43.6M 0 --:--:-- --:--:-- --:--:-- 44.3M DEBUG: Changing to port directory: /opt/bblocal/var/buildworker/ports/build/ports/science/netcdf-fortran DEBUG: OS darwin/13.4.0 (macOS 10.9.5) arch i386 DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: GCC versions for Darwin 13 i386 - 5 6 7 8 9 10 11 12 devel DEBUG: Clang versions for Darwin 13 i386 - 3.4 3.7 5.0 6.0 7.0 8.0 9.0 10 11 12 13 14 15 16 DEBUG: Sourcing PortGroup compilers 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: Sourcing PortGroup github 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: Re-registering default for extract.rename DEBUG: Re-registering default for livecheck.url DEBUG: Re-registering default for livecheck.regex DEBUG: muniversal: adding universal variant DEBUG: Reading variant descriptions from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Executing variant gcc12 provides gcc12 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Running callback portstartupitem::add_notes DEBUG: Finished running callback portstartupitem::add_notes DEBUG: Running callback compilers::add_fortran_legacy_support DEBUG: Finished running callback compilers::add_fortran_legacy_support DEBUG: Running callback compilers::add_gcc_rpath_support DEBUG: compilers PG: RPATH added to ldflags as GCC version is 12 DEBUG: Finished running callback compilers::add_gcc_rpath_support DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Starting logging for netcdf-fortran @4.6.1_0+gcc12 DEBUG: OS X 10.9.5 (darwin/13.4.0) arch i386 DEBUG: MacPorts 2.8.1 DEBUG: Xcode 6.2, CLT 6.2.0.0.1.1424975374 DEBUG: SDK 10.9 DEBUG: MACOSX_DEPLOYMENT_TARGET: 10.9 DEBUG: Executing org.macports.main (netcdf-fortran) DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Skipping completed org.macports.fetch (netcdf-fortran) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: checksum phase started at Wed Aug 30 04:16:55 UTC 2023 ---> Verifying checksums for netcdf-fortran DEBUG: Executing org.macports.checksum (netcdf-fortran) ---> Checksumming netcdf-fortran-4.6.1.tar.gz DEBUG: Calculated (rmd160) is 12bf9c7ba84f60f77e7d77e069e9365bfd3c4659 DEBUG: Correct (rmd160) checksum for netcdf-fortran-4.6.1.tar.gz DEBUG: Calculated (sha256) is 921be559e162d90370faecba7d60fa12dc4534600807a519520c277de5e7691c DEBUG: Correct (sha256) checksum for netcdf-fortran-4.6.1.tar.gz DEBUG: Calculated (size) is 2046635 DEBUG: Correct (size) checksum for netcdf-fortran-4.6.1.tar.gz DEBUG: Changing to port directory: /opt/bblocal/var/buildworker/ports/build/ports/science/netcdf-fortran DEBUG: OS darwin/13.4.0 (macOS 10.9.5) arch i386 DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: GCC versions for Darwin 13 i386 - 5 6 7 8 9 10 11 12 devel DEBUG: Clang versions for Darwin 13 i386 - 3.4 3.7 5.0 6.0 7.0 8.0 9.0 10 11 12 13 14 15 16 DEBUG: Sourcing PortGroup compilers 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: Sourcing PortGroup github 1.0 from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: Re-registering default for extract.rename DEBUG: Re-registering default for livecheck.url DEBUG: Re-registering default for livecheck.regex DEBUG: muniversal: adding universal variant DEBUG: Reading variant descriptions from /opt/bblocal/var/buildworker/ports/build/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Executing variant gcc12 provides gcc12 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Running callback portstartupitem::add_notes DEBUG: Finished running callback portstartupitem::add_notes DEBUG: Running callback compilers::add_fortran_legacy_support DEBUG: Finished running callback compilers::add_fortran_legacy_support DEBUG: Running callback compilers::add_gcc_rpath_support DEBUG: compilers PG: RPATH added to ldflags as GCC version is 12 DEBUG: Finished running callback compilers::add_gcc_rpath_support DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Starting logging for netcdf-fortran @4.6.1_0+gcc12 DEBUG: OS X 10.9.5 (darwin/13.4.0) arch i386 DEBUG: MacPorts 2.8.1 DEBUG: Xcode 6.2, CLT 6.2.0.0.1.1424975374 DEBUG: SDK 10.9 DEBUG: MACOSX_DEPLOYMENT_TARGET: 10.9 DEBUG: Fetching netcdf-fortran-4.6.1_0+gcc12.darwin_13.x86_64.tbz2 archive size ---> Computing dependencies for netcdf-fortran DEBUG: netcdf-fortran has no conflicts DEBUG: Searching for dependency: gcc12 DEBUG: Found Dependency: receipt exists for gcc12 DEBUG: Searching for dependency: netcdf DEBUG: Found Dependency: receipt exists for netcdf DEBUG: Searching for dependency: libgcc DEBUG: Found Dependency: receipt exists for libgcc DEBUG: Executing org.macports.main (netcdf-fortran) DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: archivefetch phase started at Wed Aug 30 04:16:56 UTC 2023 ---> Fetching archive for netcdf-fortran DEBUG: Executing proc-pre-org.macports.archivefetch-archivefetch-0 DEBUG: Executing proc-pre-org.macports.archivefetch-archivefetch-1 DEBUG: mpi.enforce_variant list: netcdf DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: , forbidden: DEBUG: accepted DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: mpich, forbidden: DEBUG: rejected, because required variant mpich is missing DEBUG: netcdf is installed with the following variants: +cdf5+dap+netcdf4 DEBUG: required: openmpi, forbidden: DEBUG: rejected, because required variant openmpi is missing DEBUG: Executing org.macports.archivefetch (netcdf-fortran) DEBUG: euid/egid changed to: 0/0 DEBUG: chowned /opt/local/var/macports/incoming to macports DEBUG: euid/egid changed to: 502/501 ---> netcdf-fortran-4.6.1_0+gcc12.darwin_13.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified ---> Attempting to fetch netcdf-fortran-4.6.1_0+gcc12.darwin_13.x86_64.tbz2 from http://packages-private.internal.macports.net/netcdf-fortran % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 DEBUG: Fetching archive failed: The requested URL returned error: 404 Not Found ---> Attempting to fetch netcdf-fortran-4.6.1_0+gcc12.darwin_13.x86_64.tbz2 from http://packages-private.internal.macports.net/netcdf-fortran % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 DEBUG: Fetching archive failed: The requested URL returned error: 404 Not Found ---> Attempting to fetch netcdf-fortran-4.6.1_0+gcc12.darwin_13.x86_64.tbz2 from http://packages.internal.macports.net/netcdf-fortran % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 DEBUG: Fetching archive failed: The requested URL returned error: 404 Not Found DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: Skipping completed org.macports.fetch (netcdf-fortran) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: Skipping completed org.macports.checksum (netcdf-fortran) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: extract phase started at Wed Aug 30 04:16:56 UTC 2023 ---> Extracting netcdf-fortran DEBUG: Executing org.macports.extract (netcdf-fortran) ---> Extracting netcdf-fortran-4.6.1.tar.gz DEBUG: setting option extract.args to '/opt/local/var/macports/distfiles/netcdf-fortran/netcdf-fortran-4.6.1.tar.gz' DEBUG: Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' DEVELOPER_DIR='/Library/Developer/CommandLineTools' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.9' Executing: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/netcdf-fortran/netcdf-fortran-4.6.1.tar.gz' | /usr/bin/tar -xf - DEBUG: system: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/netcdf-fortran/netcdf-fortran-4.6.1.tar.gz' | /usr/bin/tar -xf - DEBUG: euid/egid changed to: 0/0 DEBUG: chowned /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work to macports DEBUG: euid/egid changed to: 502/501 DEBUG: extract.rename: Renaming Unidata-netcdf-fortran-a6cd33e -> netcdf-fortran-4.6.1 DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: patch phase started at Wed Aug 30 04:16:57 UTC 2023 DEBUG: Executing org.macports.patch (netcdf-fortran) ---> Applying patches to netcdf-fortran ---> Applying patch-nf03_test4-Makefile.in.diff DEBUG: Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' DEVELOPER_DIR='/Library/Developer/CommandLineTools' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.9' Executing: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1" && /usr/bin/patch -p0 < '/opt/bblocal/var/buildworker/ports/build/ports/science/netcdf-fortran/files/patch-nf03_test4-Makefile.in.diff' DEBUG: system: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1" && /usr/bin/patch -p0 < '/opt/bblocal/var/buildworker/ports/build/ports/science/netcdf-fortran/files/patch-nf03_test4-Makefile.in.diff' patching file nf03_test4/Makefile.in DEBUG: Executing proc-post-org.macports.patch-patch-0 DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: configure phase started at Wed Aug 30 04:16:57 UTC 2023 ---> Configuring netcdf-fortran DEBUG: Preferred compilers: clang macports-clang-15 macports-clang-14 macports-clang-13 macports-clang-12 macports-clang-11 macports-clang-10 macports-clang-9.0 macports-clang-8.0 macports-clang-7.0 macports-clang-6.0 macports-clang-5.0 macports-clang-3.7 macports-clang-3.4 DEBUG: Using compiler 'Xcode Clang' DEBUG: Executing proc-pre-org.macports.configure-configure-0 DEBUG: Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: netcdf libgcc gcc12 DEBUG: Executing proc-pre-org.macports.configure-configure-1 DEBUG: compilers.enforce_c list: DEBUG: compilers.enforce_fortran list: DEBUG: compilers.enforce_some_fortran list: DEBUG: Executing proc-pre-org.macports.configure-configure-2 DEBUG: Executing org.macports.configure (netcdf-fortran) DEBUG: Environment: CC='/usr/bin/clang' CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/.CC_PRINT_OPTIONS' CFLAGS='-pipe -Os -fno-common -arch x86_64' CPATH='/opt/local/include' CPPFLAGS='-I/opt/local/include -DNDEBUG -DpgiFortran' CXX='/usr/bin/clang++' CXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64' DEVELOPER_DIR='/Library/Developer/CommandLineTools' F77='/opt/local/bin/gfortran-mp-12' F90='/opt/local/bin/gfortran-mp-12' F90FLAGS='-pipe -Os -fallow-argument-mismatch -m64' FC='/opt/local/bin/gfortran-mp-12' FCFLAGS='-pipe -Os -fallow-argument-mismatch -m64' FFLAGS='-pipe -Os -fallow-argument-mismatch -m64' INSTALL='/usr/bin/install -c' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.9' OBJC='/usr/bin/clang' OBJCFLAGS='-pipe -Os -arch x86_64' OBJCXX='/usr/bin/clang++' OBJCXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64' Executing: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1" && ./configure --prefix=/opt/local DEBUG: system: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1" && ./configure --prefix=/opt/local configure: netCDF-Fortran 4.6.1 checking build system type... x86_64-apple-darwin13.4.0 checking host system type... x86_64-apple-darwin13.4.0 checking target system type... x86_64-apple-darwin13.4.0 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether make supports the include directive... yes (GNU style) checking for gcc... /usr/bin/clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether /usr/bin/clang accepts -g... yes checking for /usr/bin/clang option to enable C11 features... -std=gnu11 checking whether /usr/bin/clang -std=gnu11 understands -c and -o together... yes checking dependency style of /usr/bin/clang -std=gnu11... gcc3 checking if netCDF was built with CDF5... yes checking if netCDF was built with Zstandard compression... yes configure: WARNING: configure: WARNING: ------------------------------------------ configure: WARNING: libnetcdf was built with zstd support, but HDF5_PLUGIN_PATH is not set. Either set the HDF5_PLUGIN_PATH environmental variable if zstandard tests fail, or use --disable-zstandard-plugin when running configure. configure: WARNING: ------------------------------------------ configure: WARNING: checking if netCDF was built with pnetcdf... no checking if netCDF was built with HDF5 parallel I/O features... no checking if netCDF was built with any parallel I/O features... no checking if netCDF-fortran should be built with HDF5 parallel I/O features... no checking if netCDF was built with support for szip writes... no checking if netCDF was built with support for quantize... yes checking for valgrind... no checking whether parallel IO tests should be run... no checking whether a user specified program to run mpi programs... mpiexec checking whether netCDF documentation should be generated... no checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding C compiler checking for gcc... (cached) /usr/bin/clang checking whether the compiler supports GNU C... (cached) yes checking whether /usr/bin/clang accepts -g... (cached) yes checking for /usr/bin/clang option to enable C11 features... (cached) -std=gnu11 checking whether /usr/bin/clang -std=gnu11 understands -c and -o together... (cached) yes checking dependency style of /usr/bin/clang -std=gnu11... (cached) gcc3 checking for an ANSI C-conforming const... yes checking for a sed that does not truncate output... /usr/bin/sed configure: finding Fortran compiler checking whether the compiler supports GNU Fortran... yes checking whether /opt/local/bin/gfortran-mp-12 accepts -g... yes checking whether the compiler supports GNU Fortran 77... yes checking whether /opt/local/bin/gfortran-mp-12 accepts -g... yes checking whether Fortran compiler is checked for ISO_C_BINDING support... yes checking for Fortran flag to compile .f90 files... none checking fortran 90 modules inclusion flag... -I checking if Fortran compiler supports Fortran 2003 ISO_C_BINDING... yes checking if Fortran compiler supports Fortran 2008 ISO_FORTRAN_ENV additions... yes checking if Fortran compiler supports TS29113 standard extension... yes checking if Fortran compiler supports allow-mismatch flag... yes checking if Fortran compiler supports mismatch_all flag... no checking whether fortran type sizes should be checked... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmarks should be run... yes checking where to put large temp files if large file tests are run... . configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by /usr/bin/clang -std=gnu11... /Library/Developer/CommandLineTools/usr/bin/ld checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm checking the name lister (/opt/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking how to convert x86_64-apple-darwin13.4.0 file names to x86_64-apple-darwin13.4.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin13.4.0 file names to toolchain format... func_convert_file_noop checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /opt/local/bin/nm output from /usr/bin/clang -std=gnu11 object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/time.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /usr/bin/clang -std=gnu11 supports -fno-rtti -fno-exceptions... yes checking for /usr/bin/clang -std=gnu11 option to produce PIC... -fno-common -DPIC checking if /usr/bin/clang -std=gnu11 PIC flag -fno-common -DPIC works... yes checking if /usr/bin/clang -std=gnu11 static flag -static works... no checking if /usr/bin/clang -std=gnu11 supports -c -o file.o... yes checking if /usr/bin/clang -std=gnu11 supports -c -o file.o... (cached) yes checking whether the /usr/bin/clang -std=gnu11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.4.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for /opt/local/bin/gfortran-mp-12 option to produce PIC... -fno-common checking if /opt/local/bin/gfortran-mp-12 PIC flag -fno-common works... yes checking if /opt/local/bin/gfortran-mp-12 static flag -static works... no checking if /opt/local/bin/gfortran-mp-12 supports -c -o file.o... yes checking if /opt/local/bin/gfortran-mp-12 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/gfortran-mp-12 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.4.0 dyld checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for /opt/local/bin/gfortran-mp-12 option to produce PIC... -fno-common checking if /opt/local/bin/gfortran-mp-12 PIC flag -fno-common works... yes checking if /opt/local/bin/gfortran-mp-12 static flag -static works... no checking if /opt/local/bin/gfortran-mp-12 supports -c -o file.o... yes checking if /opt/local/bin/gfortran-mp-12 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/gfortran-mp-12 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.4.0 dyld checking how to hardcode library paths into programs... immediate configure: finding other utilities configure: trying to set fortran flags for this platform checking what FC is set to... /opt/local/bin/gfortran-mp-12 checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for /opt/local/bin/nm... /opt/local/bin/nm checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "byte"... yes checking for Fortran "integer*2"... yes checking for Fortran "integer*8"... yes checking if Fortran "byte" is C "signed char"... yes checking if Fortran "byte" is C "short"... no checking if Fortran "byte" is C "int"... no checking if Fortran "byte" is C "long"... no checking if Fortran "integer*2" is C "short"... yes checking if Fortran "integer*2" is C "int"... no checking if Fortran "integer*2" is C "long"... no checking if Fortran "integer*8" is C "short"... no checking if Fortran "integer*8" is C "int"... no checking if Fortran "integer*8" is C "long long"... yes checking if Fortran "integer" is C "int"... yes checking if Fortran "real" is C "float"... yes checking if Fortran "doubleprecision" is C "double"... yes checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 configure: checking types, headers, and functions checking for floor in -lm... yes checking for library containing dlopen... none required checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... yes checking for oc_open... yes checking for nc_def_var_szip... yes checking netCDF logging present... yes checking netCDF v2 API present... yes checking netCDF-4 present... no checking whether to test the filter API... no checking for stdlib.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/param.h... yes checking for locale.h... yes checking for stdio.h... (cached) yes checking for stdarg.h... yes checking for errno.h... yes checking for ctype.h... yes checking for fcntl.h... yes checking for malloc.h... no checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking for getopt.h... yes checking for sys/time.h... (cached) yes checking for sys/resource.h... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for egrep... (cached) /usr/bin/grep -E checking for sys/wait.h that is POSIX.1 compatible... yes checking for vprintf... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for size_t... (cached) yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for uchar... no checking for longlong... no checking whether char is unsigned... no checking size of short... 0 checking size of int... 0 checking size of long... 0 checking size of float... 0 checking size of double... 0 checking size of off_t... configure: error: in `/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1': configure: error: cannot compute sizeof (off_t) See `config.log' for more details Command failed: cd "/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1" && ./configure --prefix=/opt/local Exit code: 77 Error: Failed to configure netcdf-fortran: consult /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/work/netcdf-fortran-4.6.1/config.log Error: Failed to configure netcdf-fortran: configure failure: command execution failed DEBUG: Error code: NONE DEBUG: Backtrace: configure failure: command execution failed while executing "$procedure $targetname" Error: See /opt/local/var/macports/logs/_opt_bblocal_var_buildworker_ports_build_ports_science_netcdf-fortran/netcdf-fortran/main.log for details. Error: Follow https://guide.macports.org/#project.tickets if you believe there is a bug. Error: Processing of port netcdf-fortran failed Build of 'netcdf-fortran' failed. ./mpbb/mpbb: error: `install-port' failed to run successfully