Ticket #35388: Portfile.2.diff
File Portfile.2.diff, 3.6 KB (added by mattcottrell, 12 years ago) |
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Portfile
old new 6 6 name arb 7 7 epoch 1 8 8 version 5.3 9 revision 59 revision 6 10 10 categories science 11 maintainers m e.com:matt.cottrell11 maintainers mac.com:matt.cottrell 12 12 platforms darwin 13 13 14 14 description ARB graphical DNA, RNA and amino acid sequence analysis tool … … 34 34 rmd160 d4b240da693f903d0e8bd59f4b1f1043b6935508 35 35 36 36 depends_build port:imake \ 37 port:makedepend 37 port:makedepend \ 38 port:coreutils 38 39 39 40 depends_lib port:openmotif \ 40 41 port:lynx \ 41 port:gsed \42 42 port:sablotron \ 43 43 port:glw \ 44 44 port:glew \ … … 54 54 patch-GDEHELP-Makefile.diff 55 55 56 56 configure { 57 reinplace "s| sed | gsed |g" ${worksrcpath}/GDEHELP/MENUS/align.menu \58 ${worksrcpath}/util/arb_check_build_env.pl \59 ${worksrcpath}/arb_install.sh \60 ${worksrcpath}/WINDOW/AW_status.cxx \61 ${worksrcpath}/SH/example_batch_probe_match.sh \62 ${worksrcpath}/GDEHELP/GDEmenus \63 ${worksrcpath}/GDEHELP/genhelp.sh \64 ${worksrcpath}/GDEHELP/genhelptree.sh \65 ${worksrcpath}/SOURCE_TOOLS/make_java_dependencies.sh \66 ${worksrcpath}/HELP_SOURCE/Makefile \67 ${worksrcpath}/AISC_COM/AISC/Makefile \68 ${worksrcpath}/GDEHELP/Makefile \69 ${worksrcpath}/HELP_SOURCE/genhelp/Makefile \70 ${worksrcpath}/GDEHELP/Makefile.helpfiles71 57 file copy ${worksrcpath}/config.makefile.template ${worksrcpath}/config.makefile 72 58 file copy ${filespath}/arb_macsetup ${worksrcpath}/bin 73 59 reinplace "s|@@LIBPERLDIR@@|[exec ${prefix}/bin/perl -e "use Config; print \$Config{archlib};"]/CORE|g" ${worksrcpath}/PERL2ARB/DARWIN.PL … … 83 69 84 70 build.env-append PREFIX=${prefix} \ 85 71 ARBHOME=${worksrcpath} \ 86 PATH=${worksrcpath}/bin:$ env(PATH)72 PATH=${worksrcpath}/bin:${prefix}/libexec/gnubin:$env(PATH) 87 73 88 74 # https://trac.macports.org/ticket/33756 89 75 if {${configure.compiler} == "clang"} { … … 181 167 182 168 *********************************************************** 183 169 170 If you do not have X11 installed you should install the version supplied by MacPorts: 171 172 sudo port install xorg-server quartz-wm 173 174 or install XQuartz (http://xquartz.macosforge.org) 175 176 or install the version supplied with OS X versions previous to Mountain Lion (10.8) 177 178 *********************************************************** 179 184 180 A demo data base is located at ${prefix}/share/arb/demo.arb 185 181 186 182 User generated macros, arb_tcp.dat and pt_servers have been preserved,