Opened 16 years ago
Closed 15 years ago
#17470 closed defect (fixed)
py25-biopython should depend on py25-hashlib
Reported by: | sillyfox@… | Owned by: | mww@… |
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Priority: | Normal | Milestone: | |
Component: | ports | Version: | 1.6.0 |
Keywords: | Cc: | ||
Port: | py25-biopython |
Description
while installing py25-biopython, i ran into the following error:
File "/private/tmp/foo.py", line 14, in <module> from Bio.PDB.StructureBuilder import * File "/opt/local/lib/python2.5/site-packages/Bio/PDB/__init__.py", line 31, in <module> from Polypeptide import PPBuilder, CaPPBuilder, is_aa, standard_aa_names File "/opt/local/lib/python2.5/site-packages/Bio/PDB/Polypeptide.py", line 11, in <module> from Bio.SCOP.Raf import to_one_letter_code File "/opt/local/lib/python2.5/site-packages/Bio/SCOP/__init__.py", line 47, in <module> from Bio import SeqIO File "/opt/local/lib/python2.5/site-packages/Bio/SeqIO/__init__.py", line 152, in <module> import InsdcIO #EMBL and GenBank File "/opt/local/lib/python2.5/site-packages/Bio/SeqIO/InsdcIO.py", line 7, in <module> from Bio.GenBank.Scanner import GenBankScanner, EmblScanner File "/opt/local/lib/python2.5/site-packages/Bio/GenBank/__init__.py", line 53, in <module> from Bio.EUtils import DBIds, DBIdsClient File "/opt/local/lib/python2.5/site-packages/Bio/EUtils/DBIdsClient.py", line 86, in <module> import parse, Mixins, Config, ThinClient, Datatypes File "/opt/local/lib/python2.5/site-packages/Bio/EUtils/ThinClient.py", line 531, in <module> import urllib, urllib2, cStringIO File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/urllib2.py", line 91, in <module> import hashlib File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/hashlib.py", line 133, in <module> md5 = __get_builtin_constructor('md5') File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/hashlib.py", line 60, in __get_builtin_constructor import _md5 ImportError: No module named _md5
installing py25-hashlib solved the problem.
Change History (3)
comment:1 Changed 16 years ago by mf2k (Frank Schima)
Owner: | changed from macports-tickets@… to mww@… |
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Port: | py25-biopython added |
Priority: | Low → Normal |
comment:3 Changed 15 years ago by blb@…
Resolution: | → fixed |
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Status: | new → closed |
python25 2.5.4_5 now integrates hashlib (and others) instead of being split-out to py25-hashlib (see ticket #12369).
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Assigning to maintainer.