Problem with shogun 0.9.1

[xave@…]

When installing shogun I receive:

Checking for SWIG ... 2.0.0 ... too old version 1.3.29 or later required
no

Error: swig required for modular interfaces

Check configure.log if you do not understand why it failed.
The last 20 lines of configure.log are shown below

	/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 111.1.5)
	/opt/local/lib/liblapack.dylib (compatibility version 0.0.0, current version 0.0.0)
	/opt/local/lib/libptcblas.dylib (compatibility version 0.0.0, current version 0.0.0)
	/opt/local/lib/libatlas.dylib (compatibility version 0.0.0, current version 0.0.0)
	/opt/local/lib/libglpk.0.dylib (compatibility version 27.0.0, current version 27.0.0)
	/opt/local/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.5)
	/opt/local/lib/libbz2.1.0.dylib (compatibility version 1.0.0, current version 1.0.5)
	/opt/local/Library/Frameworks/Python.framework/Versions/2.6/Python (compatibility version 2.6.0, current version 2.6.0)
	/opt/local/lib/gcc44/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0)

Result is: yes
##########################################

============ Checking for SWIG ============
Result is: 2.0.0 ... too old version 1.3.29 or later required
##########################################

Result is: no
##########################################

shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_shogun/work/shogun-0.9.1/src" && ./configure --prefix=/opt/local --disable-svm-light --libs=/opt/local/lib --install-path=/opt/local --includes=/opt/local/include --destdir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_shogun/work/destroot --includes=/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 --python=/opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6 --pydir=/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages --disable-doxygen --interfaces=libshogun,libshogunui,cmdline,python,python_modular --cc=/opt/local/bin/gcc-mp-4.4 --cxx=/opt/local/bin/g++-mp-4.4 " returned error 1
Error: Target org.macports.configure returned: configure failure: shell command failed
Warning: the following items did not execute (for shogun): org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install
Log for shogun is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_shogun/main.log
Error: Status 1 encountered during processing.
To report a bug, see <http://guide.macports.org/#project.tickets>

[jmroot (Joshua Root)]

Please remember to preview and use WikiFormatting, fill in the Port field, and cc the maintainer.

[t.achim@…]

I, too, am having the same problem.

[jameskyle@…]

Fixed in r69300

This revision also increments shogun to 0.9.3. I also had to disable hdf5 file support until an upstream fix for that comes in.

The commit also enables a variant for shogun hmm_parallel support. This enables shogun to take advantage of all cores on a system.

[t.achim@…]

Cool, thanks.