Opened 13 years ago

Closed 13 years ago

Last modified 13 years ago

#30296 closed defect (duplicate)

Fail to install Atlas on Mac Lion

Reported by: shengcer@… Owned by: macports-tickets@…
Priority: Normal Milestone:
Component: ports Version: 2.0.0
Keywords: lion Cc: ecbrown (Eric Brown), shengcer@…, talezshin@…, jameskyle@…, faisal.moledina@…, st.hennig@…, dmitry.leonenko@…, rsachdev@…, geoffgrimwood, edmacdonald555@…, sperka@…, danmichaelo+macports@…
Port: atlas

Description (last modified by ryandesign (Ryan Carsten Schmidt))

I did a clean install of Snow leopard, and then I updated to Mac lion. The procedure I was using to install macport on lion was:

sudo mkdir -p /opt/mports
cd /opt/mports
sudo svn checkout http://svn.macports.org/repository/macports/trunk

cd trunk/base
sudo ./configure --enable-readline
sudo make install
sudo make distclean

And then I was trying to use macport to install py27-numpy

sudo port install py27-numpy

everything was fine until the installation hit the failure of installing one of dependencies, atlas

--->  Computing dependencies for py27-numpy
--->  Dependencies to be installed: atlas fftw-3 py27-nose py27-distribute python27 db46 gdbm openssl zlib python_select readline sqlite3
--->  Building atlas
Error: Target org.macports.build returned: shell command failed (see log for details)
Error: Failed to install atlas
Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
Error: The following dependencies were not installed: atlas fftw-3 py27-nose py27-distribute python27 db46 gdbm openssl zlib python_select readline sqlite3
Error: Status 1 encountered during processing.

Attachments (1)

main.log (1.4 MB) - added by shengcer@… 13 years ago.
This is the log file

Download all attachments as: .zip

Change History (18)

Changed 13 years ago by shengcer@…

Attachment: main.log added

This is the log file

comment:1 Changed 13 years ago by ecbrown (Eric Brown)

Cc: eric.c.brown@… added

Cc Me!

comment:2 Changed 13 years ago by Veence (Vincent)

There are some issues related to Atlas and Lion. I’ll to have a look and fix what can be fixed, but the newest versions are difficult to compile, even on 10.6…

comment:3 in reply to:  2 Changed 13 years ago by shengcer@…

I used macport to install py26-numpy on my two MBP's (snow leopard) months ago w/o a problem. So I guess this should be exclusively problematic on lion, isn't that true?

Replying to vince@…:

There are some issues related to Atlas and Lion. I’ll to have a look and fix what can be fixed, but the newest versions are difficult to compile, even on 10.6…

comment:4 Changed 13 years ago by shengcer@…

Cc: shengcer@… added

Cc Me!

comment:5 Changed 13 years ago by nerdling (Jeremy Lavergne)

Cc: talezshin@… added

duplicate: #30300

comment:6 Changed 13 years ago by nerdling (Jeremy Lavergne)

Cc: jameskyle@… added
Keywords: lion added
Port: atlas added

comment:7 in reply to:  description Changed 13 years ago by Alberto.Verga@…

Replying to shengcer@…:

I did a clean install of Snow leopard, and then I updated to Mac lion. The procedure I was using to install macport on lion was:

sudo mkdir -p /opt/mports cd /opt/mports sudo svn checkout http://svn.macports.org/repository/macports/trunk

cd trunk/base sudo ./configure --enable-readline sudo make install sudo make distclean

And then I was trying to use macport to install py27-numpy sudo port install py27-numpy

everything was fine until the installation hit the failure of installing one of dependencies, atlas

---> Computing dependencies for py27-numpy ---> Dependencies to be installed: atlas fftw-3 py27-nose py27-distribute python27 db46 gdbm openssl zlib python_select readline sqlite3 ---> Building atlas Error: Target org.macports.build returned: shell command failed (see log for details) Error: Failed to install atlas Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log Error: The following dependencies were not installed: atlas fftw-3 py27-nose py27-distribute python27 db46 gdbm openssl zlib python_select readline sqlite3 Error: Status 1 encountered during processing.

After installing Lion I started a clean port installation (I removed /opt/local). Then I installed gcc44 and tried:
*sudo port install atlas but it failed with:

:info:build    BEGIN STAGE 2-3-2: CacheEdge DETECTION at 17:20
:info:build make -f Makefile INSTALL_LOG/atlas_zdNKB.h pre=z 2>&1 | ./xatlas_tee INSTALL_LOG/zMMCACHEEDGE.LOG
:info:build make[1]: *** [build] Error 255
:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/atlas-3.9.37/build'
:info:build make: *** [build] Error 2

(extracted from the main.log file). I have Xcode version 4.1

  1. Verga

comment:8 Changed 13 years ago by faisal.moledina@…

Duplicate: #30280. See relevant zMMCACHEEDGE.log at that ticket.

comment:9 Changed 13 years ago by faisal.moledina@…

Cc: faisal.moledina@… added

Cc Me!

comment:10 Changed 13 years ago by ryandesign (Ryan Carsten Schmidt)

Description: modified (diff)
Resolution: duplicate
Status: newclosed

comment:11 Changed 13 years ago by st.hennig@…

Cc: st.hennig@… added

Cc Me!

comment:12 Changed 13 years ago by dmitry.leonenko@…

Cc: dmitry.leonenko@… added

Cc Me!

comment:13 Changed 13 years ago by rsachdev@…

Cc: rsachdev@… added

Cc Me!

comment:14 Changed 13 years ago by geoffgrimwood

Cc: geoff@… added

Cc Me!

comment:15 Changed 13 years ago by edmacdonald555@…

Cc: edmacdonald555@… added

Cc Me!

comment:16 Changed 13 years ago by sperka@…

Cc: sperka@… added

Cc Me!

comment:17 Changed 13 years ago by danmichaelo+macports@…

Cc: danmichaelo+macports@… added

Cc Me!

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