cctools compilation error: mach-o/prune_trie.h not found

[michelle.lynn.gill@…]

While compiling cctools, which was recently added as a gcc-4* dependency (gcc-44 and gcc-45, in my case), I encountered the following error:

:info:build /usr/bin/clang -Os -DLTO_SUPPORT -DTRIE_SUPPORT -g -Wall -Wno-format-nonliteral -I. -I./../include -I.  -arch x86_64 -I/Volumes/Files/macports/libexec/llvm-3.0/include  -DNDEBUG -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -O3  -g -fno-common -c -o ./strip.o strip.c
:info:build strip.c:50:10: fatal error: 'mach-o/prune_trie.h' file not found
:info:build #include <mach-o/prune_trie.h>
:info:build          ^
:info:build 1 error generated.
:info:build make[1]: *** [strip.o] Error 1
:info:build make[1]: *** Waiting for unfinished jobs....
:info:build 1 warning generated.
:info:build make[1]: Leaving directory `/Volumes/Files/macports/var/macports/build/_Volumes_Files_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_cctools/cctools/work/cctools-822/misc'
:info:build make: *** [all] Error 1
:info:build make: Leaving directory `/Volumes/Files/macports/var/macports/build/_Volumes_Files_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_cctools/cctools/work/cctools-822'
:info:build shell command " cd "/Volumes/Files/macports/var/macports/build/_Volumes_Files_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_cctools/cctools/work/cctools-822" && /usr/bin/make -j4 -w all RC_OS="macos" USE_DEPENDENCY_FILE=NO BUILD_DYLIBS=NO LTO=-DLTO_SUPPORT CC="/usr/bin/clang" CXX="/usr/bin/clang++" RC_CFLAGS="-arch x86_64 `llvm-config-mp-3.0 --cflags`" LLVM_MC="llvm-mc-mp-3.0" TRIE=-DTRIE_SUPPORT " returned error 2
:error:build Target org.macports.build returned: shell command failed (see log for details)
:debug:build Backtrace: shell command failed (see log for details)
    while executing
"command_exec build"
    (procedure "portbuild::build_main" line 8)
    invoked from within
"$procedure $targetname"
:info:build Warning: the following items did not execute (for cctools): org.macports.activate org.macports.build org.macports.destroot org.macports.install
:notice:build Log for cctools is at: /Volumes/Files/macports/var/macports/logs/_Volumes_Files_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_cctools/cctools/main.log

From a brief search, it seems this file is provided by the ld64 port, which compiled successfully immediately before the cctools compilation, thus I believe the error is in cctools.

I'm using MacPorts 2.0.4, Mac OS X 10.7.3, and XCode 4.2.1. I realize this isn't the latest version of XCode. I have been waiting to update, as I've noticed a lot of discussion about newer versions on the mailing list. Happy to update if this will fix the issue, though.

[michelle.lynn.gill@…]

Cc Me!

[macports@…]

I have the same problem with a similar system configuration.

My system: Mac OS X 10.7.3 MacPorts 2.0.4 XCode 4.2.1

[kwasir@…]

Cc Me!

[mf2k (Frank Schima)]

There is no reason not to update Xcode to the latest version. I recommend uninstalling the old version first and then installing version 4.3.2 from the app store.

From your home directory type:

sudo /Developer/Library/uninstall-devtools --mode=all

After ​installing Xcode 4.3.2, run the following:

sudo xcode-select -switch /Applications/Xcode.app/Contents/Developer

You should then rebuild python and perl if you have them installed.

[jowens@…]

I've got the same error and I'm using XCode 4.3.2.

[jowens@…]

Replying to jowens@…:

I've got the same error and I'm using XCode 4.3.2.

Not positive, but it doesn't look like the build command is including /opt/local/include.

/usr/bin/clang -Os -DLTO_SUPPORT -DTRIE_SUPPORT -g -Wall -Wno-format-nonliteral -I. -I./../include -I.  -arch x86_64 -I/opt/local/libexec/llvm-3.0/include  -DNDEBUG -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -O3  -g -fno-common -c -o ./strip.o strip.c
./strip.c:50:10: fatal error: 'mach-o/prune_trie.h' file not found

[jeremyhu (Jeremy Huddleston Sequoia)]

The file should be provided by the ld64 port:

$ port contents ld64
Port ld64 contains:
  /opt/local/bin/ObjectDump
  /opt/local/bin/dyldinfo
  /opt/local/bin/ld
  /opt/local/bin/machocheck
  /opt/local/bin/rebase
  /opt/local/bin/unwinddump
  /opt/local/include/mach-o/prune_trie.h
  /opt/local/lib/libprunetrie.a
  /opt/local/libexec/ld64/ld
  /opt/local/share/man/man1/dyldinfo.1.gz
  /opt/local/share/man/man1/ld.1.gz
  /opt/local/share/man/man1/rebase.1.gz
  /opt/local/share/man/man1/unwinddump.1.gz

FWIW, I built all the gccs on Tiger, Leopard, SL, Lion, and Mountain Lion (except gcc42 was Tiger only, and gcc45 didn't build on Tiger for unrelated reasons).

[jeremyhu (Jeremy Huddleston Sequoia)]

Of course I also have it at /usr/local/include/mach-o/prune_trie.h because of my internal bits, so that's probably where my builds were finding it. I'm surprised nobody noticed this before. It looks like cctools needs to be updated to include a missing -I${prefix}/include

[michelle.lynn.gill@…]

Replying to jeremyhu@…:

Of course I also have it at /usr/local/include/mach-o/prune_trie.h because of my internal bits, so that's probably where my builds were finding it. I'm surprised nobody noticed this before. It looks like cctools needs to be updated to include a missing -I${prefix}/include

This is the error I suspected. I did verify that the file was installed in $PORTHOME/include/mach-o/prune_trie.h at the time of the error. It may also be worth noting that my Macports install is not in /opt/local.

[jeremyhu (Jeremy Huddleston Sequoia)]

r92106

[jowens@…]

Is that going to fix the error? There's no /Developer include in the command that fails.

/usr/bin/clang -Os -DLTO_SUPPORT -DTRIE_SUPPORT -g -Wall -Wno-format-nonliteral -I. -I./../include -I.  -arch x86_64 -I/opt/local/libexec/llvm-3.0/include  -DNDEBUG -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -O3  -g -fno-common -c -o ./strip.o strip.c

[jeremyhu (Jeremy Huddleston Sequoia)]

Weird, I saw an -I/Developer/${prefix}/include when I ran it...

Can you please test it...

[michelle.lynn.gill@…]

Replying to jeremyhu@…:

Weird, I saw an -I/Developer/${prefix}/include when I ran it...

Can you please test it...

I just updated MacPorts (and verified that the cctools Portfile contains the patch in r92106) and then tried to clean and install cctools. I get the same error that I posted above.

[jeremyhu (Jeremy Huddleston Sequoia)]

Replying to jowens@…:

Is that going to fix the error? There's no /Developer include in the command that fails.

/usr/bin/clang -Os -DLTO_SUPPORT -DTRIE_SUPPORT -g -Wall -Wno-format-nonliteral -I. -I./../include -I.  -arch x86_64 -I/opt/local/libexec/llvm-3.0/include  -DNDEBUG -D_GNU_SOURCE -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -D__STDC_LIMIT_MACROS -O3  -g -fno-common -c -o ./strip.o strip.c

Ah right, there was some other place that was tripping on that...

Well it builds fine for me on Lion with XCode 4.3.2

I looked at the preprocessed source, and it's picking up /opt/local/include/mach-o/prune_trie.h because $CPATH should be set right by base as of r54368 ... which is quite old...

So, are you overriding $CPATH?

[jeremyhu (Jeremy Huddleston Sequoia)]

Yeah, I can reproduce this by setting CPATH to something nonsensical...

r92118

[jmroot (Joshua Root)]

Older versions of clang don't support CPATH, unfortunately. I think even the Xcode 4.3.2 version doesn't support LIBRARY_PATH either.

[michelle.lynn.gill@…]

Replying to jeremyhu@…:

Yeah, I can reproduce this by setting CPATH to something nonsensical...

r92118

I was able to successfully install cctools with r92118. Thanks!

[jeremyhu (Jeremy Huddleston Sequoia)]

Yeah, it looks like CPATH support was added in the llvm-3.0 cycle, and LIBRARY_PATH was added in the llvm-3.1 cycle.

I was building fine with XCode 4.3.2, but jowens claimed it failed with 4.3.2 ... but maybe John wasn't actually using 4.3.2. /shrug

[jowens@…]

I can also successfully compile with r92118. I really am running 4.3.2 and have no special CPATH! Anyway, problem solved.

[jeremyhu (Jeremy Huddleston Sequoia)]

John, your Xcode.app may very well be 4.3.2, but that doesn't mean that your CLTools are 4.3.2. You may need to update them from within XCode.app.

Check the following:

/usr/bin/clang --version
xcrun clang --version
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang --version

You should see version 318.0.58 for all of them, and you should be able to see:

$ strings /path/to/each/clang | grep CPATH
CPATH

[ryandesign (Ryan Carsten Schmidt)]

Has duplicate (or recurrence?) #34257.