Opened 12 years ago

Closed 12 years ago

#35270 closed defect (fixed)

atlas: upgrade 3.9.84_0 < 3.10.0_0 fails

Reported by: cdeil (Christoph Deil) Owned by: Veence (Vincent)
Priority: Normal Milestone:
Component: ports Version: 2.1.1
Keywords: Cc:
Port: atlas

Description

Upgrading atlas 3.9.84_0 < 3.10.0_0 fails on my MacBook running OS X Lion (see attached main.log)

$ port outdated
The following installed ports are outdated:
atlas                          3.9.84_0 < 3.10.0_0       
$ port installed atlas
The following ports are currently installed:
  atlas @3.9.84_0+clang (active)
$ sudo port upgrade atlas

Attachments (2)

main.log (4.3 KB) - added by cdeil (Christoph Deil) 12 years ago.
main_after_clean.log (44.4 KB) - added by cdeil (Christoph Deil) 12 years ago.

Download all attachments as: .zip

Change History (7)

Changed 12 years ago by cdeil (Christoph Deil)

Attachment: main.log added

comment:1 Changed 12 years ago by ryandesign (Ryan Carsten Schmidt)

Cc: vince@… removed
Owner: changed from macports-tickets@… to vince@…

The log you attached has several lines that say "Skipping completed", meaning this was not a clean attempt. Please "sudo port clean atlas" and try again, and if it fails again, attach the new main.log.

Changed 12 years ago by cdeil (Christoph Deil)

Attachment: main_after_clean.log added

comment:2 Changed 12 years ago by cdeil (Christoph Deil)

Attached find, main_after_clean.log, the build log after running port clean. As far as I can see the problem is the same as in main.log.

$ sudo port clean atlas
Password:
--->  Cleaning atlas
$ sudo port upgrade atlas
--->  Computing dependencies for atlas
--->  Fetching archive for atlas
--->  Attempting to fetch atlas-3.10.0_0+clang.darwin_11.x86_64.tbz2 from http://packages.macports.org/atlas
--->  Fetching distfiles for atlas
--->  Verifying checksum(s) for atlas
--->  Extracting atlas
--->  Applying patches to atlas
--->  Configuring atlas
Use of clang is still experimental and may result in reduced performance or misbehavior. Use with caution.
Selected gfortran47.
--->  Building atlas
Error: org.macports.build for port atlas returned: command execution failed
Please see the log file for port atlas for details:
    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
Error: Unable to upgrade port: 1
To report a bug, follow the instructions in the guide:
    http://guide.macports.org/#project.tickets

comment:3 Changed 12 years ago by Veence (Vincent)

Do you still have the issue? If yes, try to build with gcc 4.6 or 4.7 instead (gcc46 or gcc47 variant)

comment:4 Changed 12 years ago by cdeil (Christoph Deil)

I did a clean re-install of Lion and Macports on that machine for unrelated reasons. Now the atlas install went fine (actually I think the binary was installed, but I'm not sure). Thanks for your help! Please close this ticket.

comment:5 Changed 12 years ago by Veence (Vincent)

Resolution: fixed
Status: newclosed

Ok, thanks!

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