pymol-1.7.2.1-1

[howarth.at.macports@…]

The attached Portfile.diff updates the package to the latest stable release of 1.7.2.1 at r4087 and make the additional changes...

1. Works around the breakage in port which now errorneously installs ${destroot}${prefix}/bin/pymol before the post-destroot executes by placing...

file delete ${destroot}${prefix}/bin/pymol

at the beginning of the post-destroot

2. Updates my maintainer email address to

maintainers         gmail.com:howarth.at.macports

[mtiberti (Matteo Tiberti)]

Cc Me!

[howarth.at.macports@…]

Ping

[ryandesign (Ryan Carsten Schmidt)]

Replying to howarth.at.macports@…:

2. Updates my maintainer email address to

maintainers         gmail.com:howarth.at.macports

I assume we should make this change in all the ports you maintain?

[ryandesign (Ryan Carsten Schmidt)]

Cc Me!

[howarth.at.macports@…]

Replying to ryandesign@…:

Replying to howarth.at.macports@…:

2. Updates my maintainer email address to

maintainers         gmail.com:howarth.at.macports

I assume we should make this change in all the ports you maintain?

Yes

[ryandesign (Ryan Carsten Schmidt)]

Ok, updated your address in all remaining ports in r128656.

[howarth.at.macports@…]

Portfile diff to unbreak post-destroot and update to 1.7.2.1

[howarth.at.macports@…]

While the email address in the Portfile for pymol is corrected, the pymol package is left broken under the current port release...

DEBUG: Executing proc-post-org.macports.destroot-destroot-0
DEBUG: Executing proc-post-org.macports.destroot-destroot-1
Error: org.macports.destroot for port pymol returned: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists
DEBUG: Error code: NONE
DEBUG: Backtrace: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists
    while executing
"proc-post-org.macports.destroot-destroot-1 org.macports.destroot"
    ("eval" body line 1)
    invoked from within
"eval $post $targetname"
Warning: targets not executed for pymol: org.macports.activate org.macports.destroot org.macports.install
Please see the log file for port pymol for details:
    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/main.log
To report a bug, follow the instructions in the guide:
    http://guide.macports.org/#project.tickets
Error: Processing of port pymol failed

Is there some reason why we aren't fixing this?

[ryandesign (Ryan Carsten Schmidt)]

I was unable to build pymol at all on my primary system due to a different problem, which I filed as #45994. I was able to build it on a secondary system and did encounter that destroot failure, which is #45401. I was trying to figure out why the problem was happening. I'll comment there on my findings and get it fixed and updated.

[petrrr]

Cc Me!

[ryandesign (Ryan Carsten Schmidt)]

Fixed destroot failure in r129465 and updated pymol to 1.7.2.1 in r129466