Opened 10 years ago
Closed 10 years ago
#46218 closed update (fixed)
pymol-1.7.4.0 update
| Reported by: | howarth.at.macports@… | Owned by: | ryandesign (Ryan Carsten Schmidt) |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | 2.3.3 |
| Keywords: | maintainer haspatch | Cc: | |
| Port: | pymol |
Description (last modified by ryandesign (Ryan Carsten Schmidt))
The attached Portfile.diff, new pymol-use-glkit.diff patch and revised files for the existing setup_py.diff, pmg_tk_platform.patch and pymol-clang.diff patches updates the package to the 1.7.4.0 release at the svn r4106 commit The changes include...
- Dropping the deprecated apbs_tkinter.patch for tk/tcl 8.6 support which is now committed upstream.
- Addition of the pymol-use-glkit.diff patch for darwin12 or later to avoid the use of the deprecated gluPerspective() call. Note that Apple has yet to provide a replacement function for the deprecated gluErrorString() call.
- Fix current dest-root failure by commenting out self.make_launch_script() in setup.py in the setup_py.diff patch to prevent the upstream pymol launcher script from being installed at ${destroot}${prefix}/bin/pymol.
Attachments (5)
Change History (10)
Changed 10 years ago by howarth.at.macports@…
| Attachment: | pymol-use-glkit.diff added |
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Changed 10 years ago by howarth.at.macports@…
| Attachment: | pmg_tk_platform.patch added |
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revised pmg_tk_platform.patch patch
comment:1 Changed 10 years ago by howarth.at.macports@…
Note that with latest Portfile.diff based on r4107 both the apbs_tkinter.patch and pymol-clang.diff patches can be removed from the files subdirectory of the pymol packaging.
comment:2 Changed 10 years ago by ryandesign (Ryan Carsten Schmidt)
| Description: | modified (diff) |
|---|---|
| Keywords: | maintainer haspatch added |
comment:3 follow-up: 4 Changed 10 years ago by ryandesign (Ryan Carsten Schmidt)
| Owner: | changed from macports-tickets@… to ryandesign@… |
|---|---|
| Status: | new → assigned |
I fixed the destroot failure a different way; see comment:ticket:45401:20 for an explanation of why it was happening. Would you like to keep the launcher script, or remove it as in your patches here?
comment:4 Changed 10 years ago by howarth.at.macports@…
Okay. Lets use the attached revised Portfile.diff and setup_py.diff.
Changed 10 years ago by howarth.at.macports@…
| Attachment: | Portfile.diff added |
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revised Portfile diff against 1.7.1.1-2
Changed 10 years ago by howarth.at.macports@…
| Attachment: | setup_py.diff added |
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revised setup_py.diff
Changed 10 years ago by howarth.at.macports@…
| Attachment: | pymol-clang.diff added |
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add back pymol-clang.diff to remove some unused variables
comment:5 Changed 10 years ago by ryandesign (Ryan Carsten Schmidt)
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
new pymol-use-glkit.diff patch