Opened 9 years ago

Closed 9 years ago

Last modified 9 years ago

#49666 closed update (fixed)

update pymol to svn r4041 to obtain upstream fix for legacy libstdc++ builds

Reported by: howarth.at.macports@… Owned by: ryandesign (Ryan Carsten Schmidt)
Priority: Normal Milestone:
Component: ports Version: 2.3.4
Keywords: haspatch maintainer Cc: kathryncole
Port: pymol

Description

The attached Portfile diff updates the package to use svn r4041 to obtain the fix...

r4141 | speleo3 | 2015-11-11 19:10:37 -0500 (Wed, 11 Nov 2015) | 2 lines

backport to pre-c++11 for OS X <= 10.8

from upstream which allows the legacy libstdc++ builds of pymol to complete.

Attachments (1)

Portfile.diff (569 bytes) - added by howarth.at.macports@… 9 years ago.
Portfile diff to update package to r4041 for legacy-libstdc++ fix

Download all attachments as: .zip

Change History (7)

Changed 9 years ago by howarth.at.macports@…

Attachment: Portfile.diff added

Portfile diff to update package to r4041 for legacy-libstdc++ fix

comment:1 Changed 9 years ago by howarth.at.macports@…

Note that this fixes...

[MacPorts] #49449: pymol: error: no type named 'shared_ptr' in namespace 'std'

comment:2 Changed 9 years ago by ryandesign (Ryan Carsten Schmidt)

Keywords: haspatch maintainer added
Owner: changed from macports-tickets@… to ryandesign@…
Status: newassigned

Thanks.

comment:3 Changed 9 years ago by ryandesign (Ryan Carsten Schmidt)

Resolution: fixed
Status: assignedclosed

comment:4 Changed 9 years ago by kathryncole

Is the attached .diff file now automatically included in the pymol port (i.e. will 'sudo port install pymol' now install the program itself)? Or does the .diff file need to be applied separately? If separately, do I follow the instructions in section 4.5.3 under Patch Files?

comment:5 in reply to:  4 Changed 9 years ago by ryandesign (Ryan Carsten Schmidt)

Cc: kathryn.cole@… added

Replying to kathryn.cole@…:

Is the attached .diff file now automatically included in the pymol port (i.e. will 'sudo port install pymol' now install the program itself)?

Yes, provided you run "sudo port selfupdate" first.

comment:6 Changed 9 years ago by kathryncole

It looks like it worked, thank you! I will try loading things this afternoon. Thanks again for your help!

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