#64945 closed defect (fixed)
openbabel @3.1.1: checksum mismatch
Reported by: | phycgroup | Owned by: | reneeotten (Renee Otten) |
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Priority: | Normal | Milestone: | |
Component: | ports | Version: | 2.7.2 |
Keywords: | Cc: | ryandesign (Ryan Carsten Schmidt) | |
Port: | openbabel |
Description (last modified by reneeotten (Renee Otten))
---> Computing dependencies for openbabel ---> Fetching archive for openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://packages.macports.org/openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://kmq.jp.packages.macports.org/openbabel ---> Verifying checksums for openbabel Error: Checksum (rmd160) mismatch for openbabel-3-1-1.tar.gz Error: Checksum (sha256) mismatch for openbabel-3-1-1.tar.gz Error: Checksum (size) mismatch for openbabel-3-1-1.tar.gz Error: Failed to checksum openbabel: Unable to verify file checksums Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_openbabel/openbabel/main.log for details. Error: Follow https://guide.macports.org/#project.tickets if you believe there is a bug. Error: Processing of port openbabel failed
Change History (12)
comment:1 follow-up: 5 Changed 3 years ago by reneeotten (Renee Otten)
Description: | modified (diff) |
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Keywords: | checksum removed |
Owner: | set to reneeotten |
Status: | new → accepted |
Version: | → 2.7.2 |
comment:2 Changed 3 years ago by reneeotten (Renee Otten)
Summary: | Checksum mismatch openbabel-3-1-1 → openbabel #@3.1.1: checksum mismatch |
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comment:3 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
Summary: | openbabel #@3.1.1: checksum mismatch → openbabel @3.1.1: checksum mismatch |
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comment:4 Changed 3 years ago by phycgroup
Thank you for your response. For now, I can use openbabel2, but there are bugs in there so that we want to move to openbabel 3. Happy to wait. Thank you so much for your work on this.
comment:5 Changed 3 years ago by phycgroup
Thank you for your response. For now, I can use openbabel2, but there are bugs in there so that we want to move to openbabel 3. Happy to wait. Thank you so much for your work on this.
Replying to reneeotten:
Yes, sorry for the trouble.... a while back I updated the
openbabel
port while keeping the previous version asopenbabel2
. I certainly did build that locally, but it seems in the meantime a newer version was released and I did mess that up a bit (likely changed the version number but didn't update the checksums...). In any case, updating thechecksums
alone isn't sufficient as the build fails now at a later point - I will look into this in the coming days and I apologize for committing this new port too quickly.[edit: did you want to use this newer version or is for now the `openbabel2` port sufficient for your usage?]
comment:6 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
Cc: | ryandesign added |
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comment:7 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
Resolution: | → fixed |
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Status: | accepted → closed |
comment:8 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
comment:9 Changed 3 years ago by phycgroup
Thank you for the update, but the build still fails even with the ports selfupdate and update.
sudo port install openbabel Password: ---> Computing dependencies for openbabel ---> Fetching archive for openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://packages.macports.org/openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/openbabel ---> Attempting to fetch openbabel-3.1.1_0.darwin_19.x86_64.tbz2 from https://mse.uk.packages.macports.org/openbabel ---> Verifying checksums for openbabel Error: Checksum (rmd160) mismatch for openbabel-3-1-1.tar.gz Error: Checksum (sha256) mismatch for openbabel-3-1-1.tar.gz Error: Checksum (size) mismatch for openbabel-3-1-1.tar.gz Error: Failed to checksum openbabel: Unable to verify file checksums Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_openbabel/openbabel/main.log for details. Error: Follow https://guide.macports.org/#project.tickets if you believe there is a bug. Error: Processing of port openbabel failed
comment:10 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
Wait awhile and try again. Changes do not synchronize from GitHub to the rsync server instantly. Usually they're there within an hour but sometimes it takes longer. Right now there is an intermittent network connectivity problem affecting the server that generates and publishes the new ports tarballs.
comment:11 Changed 3 years ago by ryandesign (Ryan Carsten Schmidt)
You can see the recent synchronization failures (in red) here: https://ftp.fau.de/cgi-bin/show-mirror-status.cgi?mirror=macports
Once that shows successful (green) synchronization, you can try again.
comment:12 Changed 3 years ago by reneeotten (Renee Otten)
thanks you Ryan for taking care of this! I was preoccupied by other things the last week... I'll take a look now at the conflicting file installed by both the openbabel
and py-openbabel
ports.
Yes, sorry for the trouble.... a while back I updated the
openbabel
port while keeping the previous version asopenbabel2
. I certainly did build that locally, but it seems in the meantime a newer version was released and I did mess that up a bit (likely changed the version number but didn't update the checksums...). In any case, updating thechecksums
alone isn't sufficient as the build fails now at a later point - I will look into this in the coming days and I apologize for committing this new port too quickly.[edit: did you want to use this newer version or is for now the `openbabel2` port sufficient for your usage?]