Opened 18 months ago

Last modified 6 months ago

#67598 assigned defect

bart fails to build on 10.6.8 POWERPC: Undefined symbols: "_vdprintf", "_fmemopen"

Reported by: barracuda156 Owned by: eborisch (Eric A. Borisch)
Priority: Normal Milestone:
Component: ports Version: 2.8.1
Keywords: snowleopard, leopard, powerpc Cc: mascguy (Christopher Nielsen)
Port: bart

Description

:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/misc.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/mmio.o
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(cudnn_wrapper.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(fft-cuda.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(gpuops.o) has no symbols
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/mri.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/opts.o
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(cudnn_wrapper.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(fft-cuda.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(gpuops.o) has no symbols
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/pd.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/png.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/resize.o
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(cudnn_wrapper.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(fft-cuda.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(gpuops.o) has no symbols
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/shrdptr.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/subpixel.o
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(cudnn_wrapper.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(fft-cuda.o) has no symbols
:info:build /opt/local/bin/ranlib: file: lib/libnum.a(gpuops.o) has no symbols
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/utils.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/version.o
:info:build ./ar_lock.sh rs lib/libmisc.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/ya_getopt.o
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.bart.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_bart -o bart src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/bart.o lib/libbox.a lib/libgrecon.a lib/libsense.a lib/libnoir.a lib/libiter.a lib/liblinops.a lib/libwavelet.a lib/liblowrank.a lib/libnoncart.a lib/libcalib.a lib/libsimu.a lib/libsake.a lib/libdfwavelet.a lib/libnlops.a lib/libnetworks.a lib/libnn.a lib/libiter.a lib/libmoba.a lib/libgeom.a lib/libnn.a lib/libnlops.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.avg.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_avg -o avg src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/avg.o lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.bench.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_bench -o bench src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/bench.o lib/libwavelet.a lib/liblinops.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.bin.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_bin -o bin src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/bin.o lib/libcalib.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.bitmask.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_bitmask -o bitmask src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/bitmask.o lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.cabs.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_cabs -o cabs src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/cabs.o lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.caldir.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_caldir -o caldir src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/caldir.o lib/libcalib.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build /opt/local/bin/gcc-mp-12  -O2 -Wmissing-prototypes -std=gnu11 -fopenmp -Wall -Wextra -DUSE_MACPORTS -MMD -MF ./.calmat.d -iquote /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/ -I/opt/local//include/ -I/opt/local//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, conway, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, epg, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, fovshift, homodyne, ictv, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, measure, mip, mnist, moba, mobafit, morphop, multicfl, nlinv, nnet, noise, normalize, nrmse, nufft, onehotenc, ones, pattern, phantom, pics, pocsense, poisson, pol2mask, poly, reconet, repmat, reshape, resize, rmfreq, rof, roistat, rss, rtnlinv, sake, saxpy, scale, sdot, show, signal, sim, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -Dmain_real=main_calmat -o calmat src/main.c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/calmat.o lib/libcalib.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/opt/local//lib -lfftw3f -lfftw3f_threads  -L/opt/local//lib -lopenblas -lpng   -lm 
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build ld: symbol(s) not found
:info:build       _xdprintf in libmisc.a(io.o)
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build       _xdprintf in libmisc.a(io.o)
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build ld: symbol(s) not found
:info:build ld: symbol(s) not found
:info:build ld: symbol(s) not found
:info:build ld: symbol(s) not found
:info:build ld: symbol(s) not found
:info:build ld: symbol(s) not found
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build collect2: error: ld returned 1 exit status
:info:build make[1]: *** [caldir] Error 1
:info:build make[1]: *** Waiting for unfinished jobs....
:info:build make[1]: *** [bench] Error 1
:info:build make[1]: *** [avg] Error 1
:info:build make[1]: *** [cabs] Error 1
:info:build make[1]: *** [calmat] Error 1
:info:build make[1]: *** [bitmask] Error 1
:info:build make[1]: *** [bin] Error 1
:info:build Undefined symbols:
:info:build   "_vdprintf", referenced from:
:info:build       _xdprintf in libmisc.a(io.o)
:info:build   "_fmemopen", referenced from:
:info:build       _bart_command in bart.o
:info:build ld: symbol(s) not found
:info:build collect2: error: ld returned 1 exit status
:info:build make[1]: *** [bart] Error 1
:info:build rm src/mip.o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/lowrank/svthresh.o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/num/vec3.o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/moba/recon_meco.o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/misc/io.o src/nufft.o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00/src/linops/someops.o src/twixread.o 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:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00'
:info:build make: *** [all] Error 2
:info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00'
:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_bart/bart/work/bart-0.8.00" && /usr/bin/make -j8 -w all 
:info:build Exit code: 2

Attachments (1)

bart_log.txt (849.0 KB) - added by barracuda156 18 months ago.

Download all attachments as: .zip

Change History (12)

Changed 18 months ago by barracuda156

Attachment: bart_log.txt added

comment:1 Changed 18 months ago by kencu (Ken)

Summary: bart fails to build on 10.6.8: Undefined symbols: "_vdprintf", "_fmemopen"bart fails to build on 10.6.8 POWERPC: Undefined symbols: "_vdprintf", "_fmemopen"

comment:2 Changed 18 months ago by kencu (Ken)

according to gnulib, vdprintf is missing from 10.5 and less:

https://www.gnu.org/software/gnulib/manual/html_node/vdprintf.html

but who knows what symbols are in 10.6 powerpc as it is neither 10.5 nor 10.6.

comment:3 Changed 18 months ago by kencu (Ken)

according to gnulib fmemopen is also missing on 10.5 and less… but gnulib has no replacement for it

https://www.gnu.org/software/gnulib/manual/html_node/fmemopen.html

comment:4 in reply to:  2 ; Changed 18 months ago by barracuda156

Replying to kencu:

according to gnulib, vdprintf is missing from 10.5 and less:

https://www.gnu.org/software/gnulib/manual/html_node/vdprintf.html

but who knows what symbols are in 10.6 powerpc as it is neither 10.5 nor 10.6.

As you could have seen from the log, it is 10.6.8, not 10A190 (though the same issue is present on 10A190, unsurprisingly). So looks like Apple didn’t bother to make them for PPC at all.

  1. S. Do we have some thread to track wishlist and WIP on legacysupport btw? It is perhaps better to fix these issues one by one and add fixes into legacysupport. Otherwise not only multiple ports remain broken, but we may forget what was already [partly] fixed elsewhere :)

comment:5 Changed 18 months ago by eborisch (Eric A. Borisch)

I plan to mark the port obsolete on old OSes; this is a compute/performance-intensive package, and I doubt there is any actual interest in running it on these old systems.

I'm just waiting for the buildbots to finish to see where to draw the line. I had the bad luck of slotting in right behind a rust upgrade, which is taking a long time.

comment:6 in reply to:  4 Changed 18 months ago by kencu (Ken)

Replying to barracuda156:

Replying to kencu: As you could have seen from the log, it is 10.6.8, not 10A190 (though the same issue is present on 10A190, unsurprisingly). So looks like Apple didn’t bother to make them for PPC at all.

Of course, I did look at the log.

Mac OS X 10.6.8 (darwin/10.8.0) arch powerpc

You think I'd comment otherwise?

The powerpc support in 10.6.8 is also just as haphazard as it is in 10A190, so no better or worse, just a mess.

I do hope you move on from that someday soon...

comment:7 Changed 17 months ago by mascguy (Christopher Nielsen)

Cc: mascguy added

comment:8 in reply to:  3 ; Changed 17 months ago by mascguy (Christopher Nielsen)

Replying to kencu:

according to gnulib fmemopen is also missing on 10.5 and less… but gnulib has no replacement for it

fmemopen() will soon be available for 10.12 and earlier, via legacy-support.

As for other calls like vdprintf(), we could potentially add those as well. Though I'm not volunteering at the moment, as I have a pile of work to get through...

comment:9 Changed 17 months ago by eborisch (Eric A. Borisch)

As I mentioned above, I expect the intersection of users interested in the compute-heavy package for MRI reconstructions and PowerPC macs to be zero, and as such I plan to just prevent building on old systems.

Thank you for the work on legacy-support!

comment:10 in reply to:  8 Changed 17 months ago by barracuda156

Replying to mascguy:

Replying to kencu:

according to gnulib fmemopen is also missing on 10.5 and less… but gnulib has no replacement for it

fmemopen() will soon be available for 10.12 and earlier, via legacy-support.

As for other calls like vdprintf(), we could potentially add those as well. Though I'm not volunteering at the moment, as I have a pile of work to get through...

Regardless of bart port in particular (for which I tend to agree, restricting it to newer systems is just fine), this is awesome.

comment:11 in reply to:  8 Changed 6 months ago by barracuda156

Replying to mascguy:

Replying to kencu:

according to gnulib fmemopen is also missing on 10.5 and less… but gnulib has no replacement for it

fmemopen() will soon be available for 10.12 and earlier, via legacy-support.

As for other calls like vdprintf(), we could potentially add those as well. Though I'm not volunteering at the moment, as I have a pile of work to get through...

Perhaps a more generally-relevant port which needs the same function: #70118

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