root5: 5.34.34_1 incompatible with GSL 2

[andre.david@…]

I was just updating root5 and it is failing with:

:info:build /usr/bin/clang++ -O2 -m64 -pipe -Wshadow -W -Wall -Woverloaded-virtual -fsigned-char -fno-common -Iinclude -DR__HAVE_CONFIG    -std=c++11 -stdlib=libc++   -pthread -I/opt/local/include  -DUSE_ROOT_ERROR -o math/mathmore/src/GSLRootFinderDeriv.o -c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root5/root5/work/root-5-34-34/math/mathmore/src/GSLRootFinderDeriv.cxx
:info:build In file included from /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root5/root5/work/root-5-34-34/math/mathmore/src/GSLNLSMinimizer.cxx:19:
:info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root5/root5/work/root-5-34-34/math/mathmore/src/GSLMultiFit.h:142:38: error: no member named 'J' in 'gsl_multifit_fdfsolver'
:info:build       gsl_multifit_gradient(fSolver->J, fSolver->f,fVec);
:info:build                             ~~~~~~~  ^
:info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root5/root5/work/root-5-34-34/math/mathmore/src/GSLMultiFit.h:153:45: error: no member named 'J' in 'gsl_multifit_fdfsolver'
:info:build       int ret = gsl_multifit_covar(fSolver->J, kEpsrel, fCov);
:info:build                                    ~~~~~~~  ^

This looks too intrinsic to be related to my build flags, etc. Can I provide any further information?

[MarcusCalhoun-Lopez (Marcus Calhoun-Lopez)]

The current version of gsl is incompatible with root5 (#49594).
Have you tried installing without the gsl variant?

[MarcusCalhoun-Lopez (Marcus Calhoun-Lopez)]

Cc Me!

[andre.david@…]

I confirm that -gsl did the trick. Anyway, time to move on to root6.

[andre.david@…]

Looks like root6 is also affected somehow. See #49935.

[mojca (Mojca Miklavec)]

Cc Me!

[mojca (Mojca Miklavec)]

Root6 was supposed to be fixed by #50011, I only need to figure out what exactly to commit. And now maybe it makes sense to address the gsl issue in ROOT5 first anyway.

[mojca (Mojca Miklavec)]

A patch for GSL for ROOT5

[mojca (Mojca Miklavec)]

Chris, I'm currently testing the attached patch that reverts r142498. If it proves to be successful and if you agree with it, I'll commit it combined with #50011 to avoid unnecessary revbumps.

[cjones051073 (Chris Jones)]

Fine by me ;)

[mojca (Mojca Miklavec)]

Changes committed in r143637.

[mojca (Mojca Miklavec)]

This issue should have been fixed. In case you are still experiencing problems, please open a new ticket.