Opened 9 years ago
Closed 9 years ago
#50056 closed defect (fixed)
root6 @6.04.12: internal GSL is not using the right compiler
Reported by: | andre.david@… | Owned by: | cjones051073 (Chris Jones) |
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Priority: | Normal | Milestone: | |
Component: | ports | Version: | |
Keywords: | Cc: | mojca (Mojca Miklavec) | |
Port: | root6 |
Description (last modified by mojca (Mojca Miklavec))
As per instructions in #49935 (sorry for littering the closed ticket):
sudo port uninstall root6 sudo port sync sudo port install root6
fails with conflicting +python27
in root5
as expected, so
sudo port clean root6 sudo port install root6 +python34
fails with first attached log.
:info:build configure: error: in `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root6/root6/work/build/GSL-prefix/src/GSL-build': :info:build configure: error: C compiler cannot create executables
Since I saw something like this before, I also tried
sudo port install root6 +python34 build.jobs=1
that fails with second attached log.
Attachments (2)
Change History (9)
Changed 9 years ago by andre.david@…
comment:1 Changed 9 years ago by andre.david@…
I have also deactivated root5
to run
sudo port install root6
which seems to install a precompiled binary (that works). As soon as I ask for
sudo port install root6 +python34
and compilation is triggered, the same thing as the first log above happens.
comment:2 Changed 9 years ago by andre.david@…
Just to report that
sudo port install root6 -gsl
has been compiling since some 10 minutes now (so I assume it will work) and this all looks similar to #50007.
failed: third.log
attached.
Changed 9 years ago by andre.david@…
Attachment: | third.log.bz2 added |
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comment:3 Changed 9 years ago by mojca (Mojca Miklavec)
Cc: | mojca@… added |
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Owner: | changed from macports-tickets@… to jonesc@… |
Version: | 2.3.4 |
Please remember to CC the maintainer(s) of the port when filing new tickets.
ROOT 6 has just been upgraded to version 6.06.00 in r143637. On one hand this should hopefully solve the problems with GSL. On the other hand this problem:
:info:build In file included from /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root6/root6/work/root-6-04-12/math/mathmore/src/GSLNLSMinimizer.cxx:19: :info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root6/root6/work/root-6-04-12/math/mathmore/src/GSLMultiFit.h:146:38: error: no member named 'J' in 'gsl_multifit_fdfsolver' :info:build gsl_multifit_gradient(fSolver->J, fSolver->f,fVec); :info:build ~~~~~~~ ^ :info:build /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_root6/root6/work/root-6-04-12/math/mathmore/src/GSLMultiFit.h:157:45: error: no member named 'J' in 'gsl_multifit_fdfsolver' :info:build int ret = gsl_multifit_covar(fSolver->J, kEpsrel, fCov); :info:build ~~~~~~~ ^
might have to be addressed in the same way as it was in r142498 for root5: by disabling mathmore
when GSL is disabled.
I didn't test it yet, but quite likely problems with Python 3 persist. I'm not sure if that ever worked properly.
comment:4 Changed 9 years ago by cjones051073 (Chris Jones)
You didn't do what I said to for the first two builds, which was to 'port select gcc none' first.
In any case please try again with 6.06.00, as the underlying issue should be fixed there.
comment:5 Changed 9 years ago by mojca (Mojca Miklavec)
Chris, are you sure that you are writing this reply to the right ticket? My first impression was that the reporter had two different problems, both unrelated to the chosen gcc port.
comment:6 Changed 9 years ago by cjones051073 (Chris Jones)
No, its the correct ticket. I still believe (until proven otherwise) the issue in the 'first' and 'second' logs are because the internal GCC build is picking up the gcc version the OP has 'port selected', which is GCC 5.x, which the internal GSL version does not support.
comment:7 Changed 9 years ago by mojca (Mojca Miklavec)
Description: | modified (diff) |
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Resolution: | → fixed |
Status: | new → closed |
Summary: | root6 @6.04.12 does not compile → root6 @6.04.12: internal GSL is not using the right compiler |
I'm sorry, I forgot that you gave additional instructions in the previous ticket which led to this report.
I'm closing the ticket now. I believe that upgrade to 6.06.00 should have solved these problems as well as introduced new/unrelated ones that should be discussed separately (#50066).
In case that C compiler cannot create executables
didn't disappear, please reopen the ticket. In all other cases please open a new ticket.
The two logs mentioned in original submission