#60520 closed defect (fixed)
py36-scipy @1.4.1 build fails on Mac OS Catalina 10.15.4
| Reported by: | odysseus9672 (Sean Lake) | Owned by: | michaelld (Michael Dickens) |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | 2.6.2 |
| Keywords: | Cc: | chrstphrchvz (Christopher Chavez) | |
| Port: | py-scipy |
Description (last modified by odysseus9672 (Sean Lake))
I recently upgraded a laptop to Mac OS 10.15.4, and decided to do a clean install of MacPorts. Attempting to run sudo port -s install py36-scipy gives me an error message. Log attached. It looks like it's running into a bunch of errors compiling arpack files, with a bunch of lines like:
:info:build scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/znaitr.f:666:35: :info:build 383 | call dvout (logfil, 1, rnorm, ndigit, :info:build | 2 :info:build ...... :info:build 666 | call dvout (logfil, 2, rtemp, ndigit, :info:build | 1 :info:build Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1))
Similar errors happened when I tried to build arpack @3.7.0 (I thought it was a possible missing dependency).
The XCode version installed is: 11.4.1.
Attachments (1)
Change History (10)
Changed 4 years ago by odysseus9672 (Sean Lake)
comment:1 Changed 4 years ago by odysseus9672 (Sean Lake)
| Description: | modified (diff) |
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comment:2 Changed 4 years ago by ryandesign (Ryan Carsten Schmidt)
| Owner: | set to michaelld |
|---|---|
| Port: | py-scipy added; py36-scipy removed |
| Status: | new → assigned |
comment:3 Changed 4 years ago by michaelld (Michael Dickens)
Yup ... I see this issue too when building on 10.14. I wouldn't have committed this change if it didn't build using default variants. So ... guessing that something changed in a dependency. Not that that helps much here. It's a Fortran issue ... hmmm ....
comment:4 Changed 4 years ago by michaelld (Michael Dickens)
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
comment:5 Changed 4 years ago by michaelld (Michael Dickens)
With the move to GCC10, Fortran is more strict about argument types: [20b350bb5eb864e9323f2f79324a2f7f977942d1/macports-ports]. Enabling legacy code resolves the issue for me.
comment:6 Changed 4 years ago by posita (Matt Bogosian)
This looks to still be an issue with py27-scipy@1.2.3 (which is—as of this writing—a dependency of gqrx@2.12.1_2). Manually doing sudo port install … py27-scipy +gcc9 gqrx && sudo port unsetrequested py27-scipy seemed to work for my case, but maybe that means that gcc10 should be removed as a variant/default dependency if this fix can't be back-ported to this package?
comment:7 Changed 4 years ago by chrstphrchvz (Christopher Chavez)
For reference, the upstream issue: https://github.com/scipy/scipy/issues/11611. It was addressed by scipy 1.5.0.
comment:8 Changed 4 years ago by chrstphrchvz (Christopher Chavez)
| Cc: | chrstphrchvz added |
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